AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02590.t1 MTR_3g088110 96.875 288 7 1 1 286 1 288 0.0 585
MS.gene02590.t1 MTR_8g094580 61.000 300 86 5 1 284 1 285 9.58e-119 342
MS.gene02590.t1 MTR_3g096920 59.283 307 89 6 1 286 1 292 4.16e-113 328
MS.gene02590.t1 MTR_3g096920 52.907 344 89 7 1 286 1 329 2.86e-105 309
MS.gene02590.t1 MTR_8g094580 57.317 246 74 5 55 284 1 231 4.80e-84 252
MS.gene02590.t1 MTR_2g080010 62.189 201 52 5 6 195 14 201 8.19e-81 248
MS.gene02590.t1 MTR_2g079990 66.279 172 54 2 3 173 12 180 1.95e-78 242
MS.gene02590.t1 MTR_7g085220 62.032 187 59 3 4 178 5 191 2.96e-78 241
MS.gene02590.t1 MTR_8g059170 70.552 163 46 2 3 164 10 171 3.07e-78 241
MS.gene02590.t1 MTR_2157s0010 66.871 163 44 2 7 159 8 170 5.07e-76 233
MS.gene02590.t1 MTR_4g089135 66.480 179 35 3 6 160 14 191 1.02e-75 234
MS.gene02590.t1 MTR_2g079990 58.376 197 56 2 3 173 12 208 1.70e-74 233
MS.gene02590.t1 MTR_5g041940 57.592 191 69 4 5 187 1 187 9.61e-73 224
MS.gene02590.t1 MTR_2g093810 61.538 169 61 2 3 167 10 178 3.19e-72 225
MS.gene02590.t1 MTR_7g100990 64.198 162 54 2 3 160 7 168 1.02e-71 224
MS.gene02590.t1 MTR_4g081870 64.516 155 53 2 6 158 8 162 2.65e-70 218
MS.gene02590.t1 MTR_6g012670 52.663 169 78 2 4 171 17 184 1.56e-58 190
MS.gene02590.t1 MTR_5g040420 39.841 251 126 6 7 241 14 255 2.29e-58 191
MS.gene02590.t1 MTR_6g084430 55.901 161 65 2 4 163 2 157 9.43e-58 188
MS.gene02590.t1 MTR_3g109340 47.783 203 94 3 2 199 17 212 1.60e-56 186
MS.gene02590.t1 MTR_3g109340 47.549 204 94 3 2 199 17 213 2.36e-56 185
MS.gene02590.t1 MTR_2g064090 51.872 187 77 6 5 188 4 180 3.09e-56 184
MS.gene02590.t1 MTR_4g108760 51.786 168 79 2 4 170 14 180 3.27e-56 185
MS.gene02590.t1 MTR_8g467490 46.040 202 78 5 9 192 16 204 7.74e-56 185
MS.gene02590.t1 MTR_6g011860 52.147 163 70 2 7 161 15 177 1.17e-55 184
MS.gene02590.t1 MTR_5g076850 57.500 160 62 4 5 161 4 160 1.79e-55 189
MS.gene02590.t1 MTR_3g435150 49.718 177 87 2 4 179 13 188 3.10e-55 181
MS.gene02590.t1 MTR_3g070030 50.000 162 80 1 4 164 16 177 1.27e-54 181
MS.gene02590.t1 MTR_1g008740 52.941 170 66 4 4 166 24 186 2.69e-54 180
MS.gene02590.t1 MTR_7g005280 55.294 170 65 3 4 170 12 173 2.72e-54 177
MS.gene02590.t1 MTR_1g008740 52.941 170 66 4 4 166 10 172 2.87e-54 179
MS.gene02590.t1 MTR_2g062730 51.220 164 70 3 2 160 5 163 3.93e-54 179
MS.gene02590.t1 MTR_3g064580 52.841 176 78 3 5 177 4 177 4.16e-54 186
MS.gene02590.t1 MTR_7g085260 52.326 172 75 3 5 170 15 185 4.27e-54 180
MS.gene02590.t1 MTR_6g477900 46.939 196 90 5 3 187 2 194 9.60e-54 175
MS.gene02590.t1 MTR_4g134460 55.000 160 64 3 9 166 56 209 1.00e-53 181
MS.gene02590.t1 MTR_2g078700 54.658 161 67 3 4 160 20 178 1.43e-53 179
MS.gene02590.t1 MTR_5g090970 52.201 159 66 3 9 157 20 178 2.40e-51 171
MS.gene02590.t1 MTR_5g012080 50.955 157 68 3 7 158 7 159 3.41e-51 172
MS.gene02590.t1 MTR_4g035590 52.564 156 64 3 7 158 8 157 4.62e-51 171
MS.gene02590.t1 MTR_4g101680 49.390 164 74 3 1 160 1 159 6.91e-51 171
MS.gene02590.t1 MTR_4g036030 48.171 164 76 3 1 160 1 159 2.21e-50 169
MS.gene02590.t1 MTR_6g032770 51.899 158 72 2 5 159 16 172 3.81e-50 170
MS.gene02590.t1 MTR_8g076110 49.375 160 72 3 7 162 6 160 4.77e-50 167
MS.gene02590.t1 MTR_5g090970 52.201 159 65 4 9 157 20 177 7.28e-50 167
MS.gene02590.t1 MTR_1g069805 50.955 157 67 2 7 160 10 159 1.77e-49 165
MS.gene02590.t1 MTR_5g021710 50.633 158 69 3 7 160 8 160 2.18e-49 167
MS.gene02590.t1 MTR_2g068880 39.544 263 129 8 9 245 24 282 3.70e-49 165
MS.gene02590.t1 MTR_2g064470 40.476 252 116 7 4 253 8 227 9.84e-49 164
MS.gene02590.t1 MTR_3g096140 48.148 162 78 3 1 159 1 159 2.19e-48 162
MS.gene02590.t1 MTR_7g011120 45.562 169 81 3 4 163 5 171 3.11e-48 163
MS.gene02590.t1 MTR_8g024480 44.751 181 90 3 6 176 14 194 3.90e-48 166
MS.gene02590.t1 MTR_5g014300 44.279 201 87 6 7 188 6 200 4.01e-48 163
MS.gene02590.t1 MTR_7g011130 44.571 175 80 3 4 163 16 188 1.17e-47 162
MS.gene02590.t1 MTR_2g068920 50.588 170 70 4 9 164 23 192 1.43e-47 160
MS.gene02590.t1 MTR_1g096430 48.447 161 74 3 1 157 1 156 1.55e-47 162
MS.gene02590.t1 MTR_3g096140 48.148 162 78 3 1 159 1 159 1.81e-47 162
MS.gene02590.t1 MTR_7g097090 50.980 153 65 2 7 156 10 155 2.30e-47 160
MS.gene02590.t1 MTR_3g116070 51.634 153 63 3 3 144 19 171 1.42e-46 160
MS.gene02590.t1 MTR_4g075980 46.386 166 77 3 1 162 9 166 3.92e-46 157
MS.gene02590.t1 MTR_5g069030 38.346 266 141 7 6 264 24 273 4.04e-46 164
MS.gene02590.t1 MTR_8g099750 48.734 158 74 3 6 158 13 168 4.60e-46 155
MS.gene02590.t1 MTR_1g090720 50.955 157 71 3 7 157 42 198 2.65e-45 159
MS.gene02590.t1 MTR_3g098810 50.920 163 66 4 6 158 13 171 2.85e-45 153
MS.gene02590.t1 MTR_1g090723 48.780 164 74 6 9 168 10 167 3.92e-45 161
MS.gene02590.t1 MTR_4g098630 45.714 175 86 3 6 174 5 176 4.07e-45 155
MS.gene02590.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 5.51e-45 155
MS.gene02590.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 1.61e-44 156
MS.gene02590.t1 MTR_8g063550 47.134 157 77 3 6 159 5 158 1.65e-44 156
MS.gene02590.t1 MTR_1g090723 48.780 164 73 6 9 168 10 166 1.68e-44 159
MS.gene02590.t1 MTR_1g097300 50.323 155 69 4 9 159 21 171 2.04e-44 158
MS.gene02590.t1 MTR_1g090723 48.780 164 73 6 9 168 10 166 2.35e-44 159
MS.gene02590.t1 MTR_0036s0150 49.405 168 74 6 5 168 3 163 2.51e-44 158
MS.gene02590.t1 MTR_3g093050 45.699 186 91 4 7 187 22 202 4.67e-44 158
MS.gene02590.t1 MTR_3g093050 46.196 184 89 4 7 185 22 200 5.45e-44 158
MS.gene02590.t1 MTR_3g093040 46.250 160 76 4 3 157 104 258 1.93e-42 148
MS.gene02590.t1 MTR_2g086880 48.649 148 64 4 9 154 20 157 1.99e-41 150
MS.gene02590.t1 MTR_8g093580 36.929 241 140 8 6 241 5 238 2.28e-41 149
MS.gene02590.t1 MTR_2g086880 48.649 148 64 4 9 154 20 157 2.37e-41 149
MS.gene02590.t1 MTR_3g098810 53.285 137 57 2 6 137 13 147 3.61e-41 140
MS.gene02590.t1 MTR_3g070040 43.636 165 84 4 4 164 5 164 2.89e-40 143
MS.gene02590.t1 MTR_8g023840 34.007 297 160 11 7 283 11 291 1.03e-37 137
MS.gene02590.t1 MTR_3g096140 45.390 141 71 3 22 159 1 138 4.74e-37 134
MS.gene02590.t1 MTR_4g052620 35.294 221 120 5 7 204 5 225 7.35e-35 127
MS.gene02590.t1 MTR_4g094302 42.675 157 76 3 7 157 11 159 2.24e-34 123
MS.gene02590.t1 MTR_4g094302 46.094 128 58 2 7 131 11 130 7.17e-33 118
MS.gene02590.t1 MTR_2g086690 43.030 165 80 6 8 161 5 166 1.03e-32 120
MS.gene02590.t1 MTR_8g023860 41.935 155 75 5 6 154 11 156 3.85e-32 123
MS.gene02590.t1 MTR_7g105170 36.747 166 93 6 7 161 4 168 4.12e-30 114
MS.gene02590.t1 MTR_8g023930 34.061 229 117 8 7 228 24 225 4.70e-30 118
MS.gene02590.t1 MTR_8g023900 39.412 170 89 7 7 170 12 173 9.03e-30 117
MS.gene02590.t1 MTR_8g023900 42.038 157 70 6 10 157 196 340 2.15e-29 116
MS.gene02590.t1 MTR_8g093790 38.235 170 81 6 3 171 6 152 1.10e-27 105
MS.gene02590.t1 MTR_8g023880 36.413 184 81 8 1 164 1 168 4.42e-26 103
MS.gene02590.t1 MTR_7g070140 52.273 88 39 1 60 144 17 104 6.36e-23 92.0
MS.gene02590.t1 MTR_7g083360 33.088 136 84 4 3 134 6 138 8.20e-21 87.0
MS.gene02590.t1 MTR_3g096400 32.121 165 96 4 1 155 1 159 1.50e-20 87.8
MS.gene02590.t1 MTR_7g083330 32.836 134 83 4 5 134 16 146 1.30e-18 82.0
MS.gene02590.t1 MTR_7g083370 30.534 131 84 4 7 133 10 137 2.22e-16 74.7
MS.gene02590.t1 MTR_8g102240 32.237 152 78 6 5 132 45 195 2.71e-12 67.0
MS.gene02590.t1 MTR_8g102240 32.237 152 78 6 5 132 45 195 2.71e-12 67.0
MS.gene02590.t1 MTR_4g078875 31.944 144 79 5 7 132 48 190 3.62e-12 65.9
MS.gene02590.t1 MTR_7g116460 31.515 165 95 8 13 167 11 167 5.62e-12 63.9
MS.gene02590.t1 MTR_7g070150 48.611 72 30 3 103 174 9 73 5.74e-12 61.2
MS.gene02590.t1 MTR_1g087190 60.417 48 18 1 9 55 7 54 1.20e-11 59.3
MS.gene02590.t1 MTR_8g069160 31.034 145 78 6 7 132 68 209 1.76e-11 63.5
MS.gene02590.t1 MTR_4g088245 31.034 145 78 6 7 132 68 209 3.30e-11 63.2
MS.gene02590.t1 MTR_1g093680 34.028 144 74 7 7 132 58 198 4.59e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02590.t1 AT1G01720 70.333 300 64 8 1 286 1 289 2.41e-145 409
MS.gene02590.t1 AT1G77450 61.798 267 54 5 2 265 5 226 2.67e-109 317
MS.gene02590.t1 AT5G08790 64.751 261 55 7 1 253 1 232 2.01e-107 313
MS.gene02590.t1 AT5G63790 55.290 293 78 6 1 286 44 290 1.96e-101 299
MS.gene02590.t1 AT5G63790 55.290 293 78 6 1 286 54 300 2.81e-101 299
MS.gene02590.t1 AT3G04070 61.307 199 63 5 7 194 10 205 7.48e-78 240
MS.gene02590.t1 AT3G15500 64.571 175 58 2 3 176 10 181 8.86e-78 239
MS.gene02590.t1 AT4G27410 54.077 233 89 4 3 220 10 239 1.14e-77 238
MS.gene02590.t1 AT3G04070 57.477 214 63 5 7 194 10 221 1.56e-77 240
MS.gene02590.t1 AT1G52890 64.205 176 59 2 3 177 10 182 6.31e-77 237
MS.gene02590.t1 AT1G61110 69.880 166 39 2 6 160 15 180 8.53e-77 237
MS.gene02590.t1 AT4G27410 50.800 250 88 5 3 220 10 256 2.20e-74 230
MS.gene02590.t1 AT3G15510 69.811 159 35 3 11 157 21 178 9.74e-72 225
MS.gene02590.t1 AT1G69490 63.580 162 57 2 1 160 3 164 8.73e-71 219
MS.gene02590.t1 AT1G52880 67.683 164 43 2 11 164 21 184 1.90e-67 213
MS.gene02590.t1 AT3G18400 55.280 161 67 2 4 163 2 158 1.73e-58 189
MS.gene02590.t1 AT5G61430 52.976 168 77 2 4 170 13 179 2.06e-57 187
MS.gene02590.t1 AT2G33480 59.355 155 54 3 5 158 13 159 6.77e-57 184
MS.gene02590.t1 AT5G07680 52.976 168 77 2 4 170 14 180 3.73e-56 184
MS.gene02590.t1 AT1G26870 48.691 191 81 3 7 188 16 198 3.80e-56 186
MS.gene02590.t1 AT2G02450 55.625 160 63 3 9 166 53 206 5.92e-56 185
MS.gene02590.t1 AT2G02450 55.625 160 63 3 9 166 53 206 6.63e-56 186
MS.gene02590.t1 AT5G07680 53.293 167 76 2 5 170 1 166 7.41e-56 183
MS.gene02590.t1 AT2G33480 58.065 155 58 3 5 158 13 161 9.77e-56 181
MS.gene02590.t1 AT5G39610 55.556 162 70 2 5 165 18 178 2.66e-55 180
MS.gene02590.t1 AT5G39820 48.603 179 71 3 9 166 22 200 3.39e-55 182
MS.gene02590.t1 AT5G53950 55.625 160 55 3 7 157 17 169 1.31e-54 181
MS.gene02590.t1 AT2G43000 54.088 159 69 3 9 166 20 175 1.97e-54 178
MS.gene02590.t1 AT5G13180 53.714 175 71 3 5 176 12 179 1.98e-54 177
MS.gene02590.t1 AT1G65910 51.667 180 78 5 5 178 4 180 2.70e-54 186
MS.gene02590.t1 AT3G15170 51.220 164 76 2 4 164 17 179 4.86e-54 178
MS.gene02590.t1 AT3G04060 52.632 171 73 3 5 173 18 182 6.49e-54 178
MS.gene02590.t1 AT3G03200 53.939 165 68 5 5 165 4 164 1.22e-53 181
MS.gene02590.t1 AT2G24430 53.012 166 65 3 4 163 13 171 1.35e-53 177
MS.gene02590.t1 AT2G24430 53.012 166 65 3 4 163 13 171 1.35e-53 177
MS.gene02590.t1 AT1G76420 53.750 160 67 3 3 159 18 173 1.38e-53 177
MS.gene02590.t1 AT5G18270 56.129 155 65 2 5 157 19 172 4.04e-53 176
MS.gene02590.t1 AT3G17730 50.556 180 78 5 7 178 6 182 4.32e-53 173
MS.gene02590.t1 AT5G17260 53.333 165 69 5 5 165 4 164 4.37e-53 180
MS.gene02590.t1 AT5G18270 56.129 155 65 2 5 157 19 172 7.29e-53 176
MS.gene02590.t1 AT3G29035 62.595 131 48 1 2 131 19 149 3.51e-52 173
MS.gene02590.t1 AT1G79580 50.000 162 70 3 2 158 12 167 7.46e-52 174
MS.gene02590.t1 AT1G79580 50.000 162 70 3 2 158 12 167 7.46e-52 174
MS.gene02590.t1 AT1G79580 50.000 162 70 3 2 158 12 167 7.46e-52 174
MS.gene02590.t1 AT1G79580 50.000 162 70 3 2 158 12 167 7.46e-52 174
MS.gene02590.t1 AT1G79580 50.000 162 70 3 2 158 12 167 7.46e-52 174
MS.gene02590.t1 AT4G17980 53.205 156 67 3 7 157 6 160 1.73e-51 170
MS.gene02590.t1 AT4G17980 53.205 156 67 3 7 157 6 160 2.82e-51 170
MS.gene02590.t1 AT4G10350 53.205 156 66 3 7 158 9 161 5.99e-51 171
MS.gene02590.t1 AT1G56010 45.361 194 91 4 4 195 16 196 2.94e-50 169
MS.gene02590.t1 AT1G33280 51.923 156 65 3 7 158 8 157 5.58e-50 167
MS.gene02590.t1 AT1G62700 50.000 162 72 3 1 158 1 157 7.96e-50 169
MS.gene02590.t1 AT1G62700 50.000 162 72 3 1 158 1 157 7.96e-50 169
MS.gene02590.t1 AT5G62380 50.000 164 73 3 1 160 1 159 1.10e-49 168
MS.gene02590.t1 AT5G62380 50.000 164 73 3 1 160 1 159 1.10e-49 168
MS.gene02590.t1 AT3G10490 51.948 154 69 3 7 157 27 178 1.27e-49 164
MS.gene02590.t1 AT2G18060 50.000 158 70 3 7 160 9 161 1.34e-49 168
MS.gene02590.t1 AT2G18060 50.000 158 70 3 7 160 9 161 1.34e-49 168
MS.gene02590.t1 AT1G12260 49.383 162 73 3 1 158 1 157 1.36e-49 167
MS.gene02590.t1 AT1G71930 50.323 155 68 3 7 157 9 158 1.71e-49 166
MS.gene02590.t1 AT1G71930 50.323 155 68 3 7 157 9 158 1.71e-49 166
MS.gene02590.t1 AT1G12260 50.307 163 70 4 1 158 1 157 2.38e-49 168
MS.gene02590.t1 AT4G36160 51.282 156 67 3 7 158 10 160 2.50e-49 167
MS.gene02590.t1 AT4G36160 51.282 156 67 3 7 158 10 160 2.50e-49 167
MS.gene02590.t1 AT3G10480 50.943 159 73 3 2 157 22 178 2.58e-49 169
MS.gene02590.t1 AT4G36160 51.282 156 67 3 7 158 14 164 2.62e-49 167
MS.gene02590.t1 AT3G10480 50.314 159 73 3 2 157 22 177 2.87e-49 169
MS.gene02590.t1 AT3G10500 50.588 170 75 4 2 168 4 167 5.64e-49 171
MS.gene02590.t1 AT5G04410 50.588 170 75 4 2 168 4 167 1.03e-48 170
MS.gene02590.t1 AT5G66300 50.314 159 71 3 7 161 12 166 1.13e-48 164
MS.gene02590.t1 AT2G46770 47.904 167 73 4 6 158 15 181 1.24e-48 166
MS.gene02590.t1 AT1G54330 51.534 163 70 3 5 164 4 160 1.34e-48 164
MS.gene02590.t1 AT5G46590 52.903 155 67 4 7 157 6 158 1.40e-48 163
MS.gene02590.t1 AT3G12977 50.323 155 74 3 4 157 15 167 1.59e-48 163
MS.gene02590.t1 AT3G10490 51.948 154 69 3 7 157 27 178 3.17e-48 166
MS.gene02590.t1 AT1G33060 53.205 156 63 4 7 157 24 174 3.32e-48 170
MS.gene02590.t1 AT1G33060 53.205 156 63 4 7 157 24 174 3.50e-48 170
MS.gene02590.t1 AT4G35580 54.487 156 61 4 7 157 9 159 3.52e-48 168
MS.gene02590.t1 AT4G35580 54.487 156 61 4 7 157 9 159 3.72e-48 168
MS.gene02590.t1 AT4G35580 54.487 156 61 4 7 157 9 159 5.11e-48 167
MS.gene02590.t1 AT2G17040 47.590 166 74 4 1 162 1 157 6.09e-48 161
MS.gene02590.t1 AT1G32770 47.273 165 76 3 6 159 15 179 2.53e-47 162
MS.gene02590.t1 AT5G46590 54.286 140 60 2 7 142 6 145 2.74e-47 159
MS.gene02590.t1 AT4G28530 48.538 171 62 3 6 157 9 172 1.07e-46 160
MS.gene02590.t1 AT3G61910 42.487 193 93 5 6 180 10 202 2.61e-46 159
MS.gene02590.t1 AT1G34180 48.466 163 75 5 9 168 18 174 3.55e-46 161
MS.gene02590.t1 AT1G34190 49.080 163 74 5 9 168 18 174 9.18e-46 162
MS.gene02590.t1 AT5G24590 39.608 255 110 9 7 222 13 262 2.09e-45 159
MS.gene02590.t1 AT1G34180 48.466 163 75 5 9 168 18 174 2.46e-45 161
MS.gene02590.t1 AT3G12910 50.000 164 66 5 9 157 23 185 2.70e-45 155
MS.gene02590.t1 AT1G32510 50.000 162 67 4 7 157 6 164 6.56e-45 154
MS.gene02590.t1 AT3G10480 43.229 192 71 4 2 157 22 211 2.30e-44 157
MS.gene02590.t1 AT1G34180 45.143 175 75 5 9 168 18 186 2.42e-44 156
MS.gene02590.t1 AT1G34180 45.143 175 75 5 9 168 18 186 1.21e-43 156
MS.gene02590.t1 AT5G09330 46.497 157 78 3 6 159 5 158 6.92e-43 153
MS.gene02590.t1 AT5G09330 46.497 157 78 3 6 159 5 158 6.92e-43 153
MS.gene02590.t1 AT5G09330 46.497 157 78 3 6 159 5 158 6.92e-43 153
MS.gene02590.t1 AT5G09330 46.497 157 78 3 6 159 5 158 6.92e-43 153
MS.gene02590.t1 AT5G09330 46.497 157 78 3 6 159 5 158 6.92e-43 153
MS.gene02590.t1 AT3G49530 46.541 159 78 3 7 161 13 168 7.96e-43 151
MS.gene02590.t1 AT5G64060 45.860 157 79 4 6 159 5 158 1.28e-42 149
MS.gene02590.t1 AT3G49530 46.541 159 78 3 7 161 13 168 2.00e-42 151
MS.gene02590.t1 AT1G32870 50.303 165 73 5 7 168 10 168 4.57e-39 143
MS.gene02590.t1 AT1G32870 50.303 165 73 5 7 168 10 168 5.95e-39 143
MS.gene02590.t1 AT1G32870 50.303 165 73 5 7 168 46 204 6.76e-39 143
MS.gene02590.t1 AT2G27300 50.400 125 60 2 7 129 14 138 7.87e-39 139
MS.gene02590.t1 AT3G44290 41.718 163 79 4 9 165 16 168 1.58e-37 133
MS.gene02590.t1 AT5G22290 42.073 164 78 5 9 165 23 176 2.67e-37 135
MS.gene02590.t1 AT3G44290 41.718 163 79 4 9 165 16 168 1.06e-36 133
MS.gene02590.t1 AT5G61430 51.220 123 46 3 55 170 1 116 1.73e-34 126
MS.gene02590.t1 AT5G64530 38.674 181 85 4 5 171 1 169 2.39e-34 123
MS.gene02590.t1 AT5G04395 41.558 154 73 3 2 138 23 176 1.14e-33 121
MS.gene02590.t1 AT5G64530 47.727 132 54 3 5 133 1 120 4.52e-33 119
MS.gene02590.t1 AT2G33480 57.000 100 39 2 60 158 8 104 1.49e-32 119
MS.gene02590.t1 AT1G56010 43.836 146 68 3 55 199 1 133 6.19e-32 119
MS.gene02590.t1 AT3G44350 36.000 225 112 10 1 202 1 216 6.46e-32 118
MS.gene02590.t1 AT5G22380 34.962 266 122 14 1 250 1 231 8.71e-32 118
MS.gene02590.t1 AT4G10350 56.000 100 40 2 60 158 18 114 3.40e-31 118
MS.gene02590.t1 AT4G28530 38.095 168 47 2 6 157 9 135 1.20e-30 117
MS.gene02590.t1 AT3G12977 52.427 103 46 3 56 157 14 114 2.76e-29 111
MS.gene02590.t1 AT3G44350 40.845 142 71 5 1 133 1 138 4.25e-29 108
MS.gene02590.t1 AT4G01520 37.931 174 90 6 8 171 5 170 2.63e-27 108
MS.gene02590.t1 AT4G01550 35.354 198 112 5 10 200 7 195 3.86e-27 110
MS.gene02590.t1 AT4G01540 38.372 172 88 6 10 171 7 170 3.87e-26 106
MS.gene02590.t1 AT4G01540 38.372 172 88 6 10 171 7 170 5.01e-26 106
MS.gene02590.t1 AT4G01540 38.372 172 88 6 10 171 7 170 5.81e-26 106
MS.gene02590.t1 AT4G01540 38.372 172 88 6 10 171 7 170 6.88e-26 106
MS.gene02590.t1 AT3G04420 40.000 130 73 3 5 129 1 130 2.99e-25 102
MS.gene02590.t1 AT3G04420 40.000 130 73 3 5 129 1 130 7.57e-25 102
MS.gene02590.t1 AT1G02230 40.000 130 67 5 8 129 4 130 7.80e-24 99.8
MS.gene02590.t1 AT2G43000 48.485 99 47 3 69 166 2 97 3.67e-23 94.4
MS.gene02590.t1 AT5G14000 33.333 180 103 5 5 181 13 178 4.51e-23 94.4
MS.gene02590.t1 AT5G14000 37.241 145 86 3 5 146 13 155 1.20e-22 92.0
MS.gene02590.t1 AT1G02220 38.462 130 72 4 5 129 1 127 1.05e-20 91.3
MS.gene02590.t1 AT1G02250 40.000 130 67 5 8 129 4 130 1.32e-20 90.9
MS.gene02590.t1 AT1G01010 35.185 162 74 7 10 154 6 153 5.20e-20 89.7
MS.gene02590.t1 AT3G10490 50.633 79 36 2 80 157 2 78 4.35e-18 83.6
MS.gene02590.t1 AT3G10490 50.633 79 36 2 80 157 2 78 4.35e-18 83.6
MS.gene02590.t1 AT3G56530 33.333 159 91 6 4 155 49 199 1.78e-17 81.3
MS.gene02590.t1 AT5G50820 35.821 134 69 5 5 131 15 138 2.23e-17 79.0
MS.gene02590.t1 AT3G04430 37.121 132 68 5 13 130 6 136 1.06e-15 74.3
MS.gene02590.t1 AT2G18060 44.156 77 37 2 85 160 2 73 4.47e-15 73.9
MS.gene02590.t1 AT4G29230 33.775 151 74 7 7 132 48 197 4.50e-13 69.3
MS.gene02590.t1 AT4G29230 33.775 151 74 7 7 132 47 196 4.58e-13 69.3
MS.gene02590.t1 AT4G29230 33.775 151 74 7 7 132 48 197 4.71e-13 69.3
MS.gene02590.t1 AT5G22290 41.860 86 34 4 86 165 2 77 2.35e-12 65.9
MS.gene02590.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.03e-11 65.1
MS.gene02590.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.27e-11 65.1
MS.gene02590.t1 AT5G56620 30.519 154 78 6 7 132 43 195 1.53e-11 64.7
MS.gene02590.t1 AT5G14490 29.101 189 96 9 7 169 55 231 2.08e-11 63.9
MS.gene02590.t1 AT5G14490 29.101 189 96 9 7 169 58 234 2.47e-11 63.9
MS.gene02590.t1 AT5G14490 31.973 147 75 7 7 132 55 197 2.84e-11 63.2
MS.gene02590.t1 AT5G14490 29.101 189 96 9 7 169 58 234 3.49e-11 63.5

Find 96 sgRNAs with CRISPR-Local

Find 138 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGCAATGGATTAGTATTT+TGG 0.127740 3.1:+71022866 None:intergenic
CGCAAACTACGGCTGGAATT+AGG 0.167335 3.1:-71023077 MS.gene02590:CDS
TTTCAATGCTCAAAAGGTTT+TGG 0.220852 3.1:+71022825 None:intergenic
GCCACCCTGAACACTGGTTT+TGG 0.242265 3.1:-71022892 MS.gene02590:CDS
TTCTTGATTCCAACCGGTTT+AGG 0.266059 3.1:+71023883 None:intergenic
GGGCGGCTGGGTCTGGATAT+TGG 0.274315 3.1:-71023939 MS.gene02590:CDS
TTTATAGGTATGGCTTCTTA+TGG 0.275721 3.1:-71024027 MS.gene02590:intron
TCAAGGCCGAACCGGGCGGC+TGG 0.280890 3.1:-71023952 MS.gene02590:CDS
CCGAACCGGGCGGCTGGGTC+TGG 0.306529 3.1:-71023946 MS.gene02590:CDS
TCTTGATTCCAACCGGTTTA+GGG 0.332888 3.1:+71023884 None:intergenic
GCAAACTACGGCTGGAATTA+GGG 0.333355 3.1:-71023076 MS.gene02590:CDS
CGGTTCGGCCTTGAACCGTT+TGG 0.337242 3.1:+71023961 None:intergenic
TGCCCTTCTTGTTGTAAATA+CGG 0.356578 3.1:+71023217 None:intergenic
GGAAGCCAAAACCAGTGTTC+AGG 0.356962 3.1:+71022887 None:intergenic
GGTTCGGCCTTGAACCGTTT+GGG 0.375212 3.1:+71023962 None:intergenic
ATCTATATAAATATGATCCT+TGG 0.383433 3.1:-71024214 MS.gene02590:CDS
GTGGCATCCACGTAATTATA+AGG 0.393502 3.1:+71022910 None:intergenic
TCTGGATATTGGAAGGCAAC+CGG 0.400133 3.1:-71023928 MS.gene02590:CDS
CTCGAATCGGTGTGCAGCTT+AGG 0.410548 3.1:+71023021 None:intergenic
ACCGGTTTAGGGTGACCTAT+TGG 0.422320 3.1:+71023895 None:intergenic
CCAGACCCAGCCGCCCGGTT+CGG 0.426418 3.1:+71023946 None:intergenic
CGTAATTATAAGGAAATTCA+AGG 0.432406 3.1:+71022920 None:intergenic
CCAGCCGTAGTTTGCGGCGG+AGG 0.437220 3.1:+71023084 None:intergenic
CGGCTAACAACACCGTTGCT+TGG 0.440118 3.1:+71023180 None:intergenic
CAAACGGTTCAAGGCCGAAC+CGG 0.447727 3.1:-71023960 MS.gene02590:CDS
CTGGATATTGGAAGGCAACC+GGG 0.449962 3.1:-71023927 MS.gene02590:CDS
TTTGTCTTTCAATGCTCAAA+AGG 0.450438 3.1:+71022819 None:intergenic
CAAGGCCGAACCGGGCGGCT+GGG 0.451424 3.1:-71023951 MS.gene02590:CDS
TAGGCTGCGACGTGCATTTG+CGG 0.459621 3.1:+71024264 None:intergenic
AAAGCTTTCTTGATTCCAAC+CGG 0.462419 3.1:+71023877 None:intergenic
GATCATGCACGAGTATCGTT+TGG 0.466085 3.1:-71023809 MS.gene02590:CDS
CTAAAGGTGATAAAACCAAT+TGG 0.468401 3.1:-71023831 MS.gene02590:CDS
ACCTATTGGTTTATCCGCCC+CGG 0.468728 3.1:+71023909 None:intergenic
GTAGTTTGCGGCGGAGGATG+TGG 0.472297 3.1:+71023090 None:intergenic
ACCAATAGGTCACCCTAAAC+CGG 0.472837 3.1:-71023896 MS.gene02590:CDS
CTAATTCCAGCCGTAGTTTG+CGG 0.474275 3.1:+71023078 None:intergenic
TATGGCTTCTTATGGAGAAA+AGG 0.474341 3.1:-71024019 MS.gene02590:CDS
TCTATATAAATATGATCCTT+GGG 0.481892 3.1:-71024213 MS.gene02590:CDS
GTGAGCCTAAGTGGAATGAA+TGG 0.482300 3.1:-71022951 MS.gene02590:CDS
GAAGCCAAAACCAGTGTTCA+GGG 0.483454 3.1:+71022888 None:intergenic
GGTTGGAATCAAGAAAGCTT+TGG 0.483861 3.1:-71023875 MS.gene02590:CDS
GAAAGTACCCAAACGGTTCA+AGG 0.487674 3.1:-71023969 MS.gene02590:CDS
AGGTGCAGAGTGAGCCTAAG+TGG 0.496331 3.1:-71022960 MS.gene02590:CDS
CCTCCGCCGCAAACTACGGC+TGG 0.497456 3.1:-71023084 MS.gene02590:CDS
ATACTCGTGCATGATCCAAT+TGG 0.497532 3.1:+71023816 None:intergenic
TTCTCCCATTCATTCCACTT+AGG 0.500482 3.1:+71022946 None:intergenic
TTGCCGTATTTACAACAAGA+AGG 0.503330 3.1:-71023220 MS.gene02590:CDS
CGAGCTCCTCATCCGTTGGA+TGG 0.515341 3.1:+71024303 None:intergenic
GCACACCGATTCGAGCTGTT+CGG 0.523824 3.1:-71023013 MS.gene02590:CDS
CCTCCACGTGTCACGATCTC+CGG 0.524239 3.1:+71023123 None:intergenic
ATCCGAGCTTCAATTACCAC+CGG 0.527594 3.1:-71024336 MS.gene02590:CDS
ACATCCTCCGCCGCAAACTA+CGG 0.532859 3.1:-71023088 MS.gene02590:CDS
TTCGGAGCACGTGGTATCAC+CGG 0.534411 3.1:-71022995 MS.gene02590:CDS
CAGATTCCATCCAACGGATG+AGG 0.542143 3.1:-71024309 MS.gene02590:CDS
AAACGGTTCAAGGCCGAACC+GGG 0.545704 3.1:-71023959 MS.gene02590:CDS
TGAGCCTAAGTGGAATGAAT+GGG 0.547748 3.1:-71022950 MS.gene02590:CDS
ACCGGGGCGGATAAACCAAT+AGG 0.550145 3.1:-71023910 MS.gene02590:CDS
GCGATGATCGGAACGGCGAT+AGG 0.550339 3.1:+71024245 None:intergenic
TGCACCTCACTTGCAAACTC+CGG 0.557338 3.1:+71022976 None:intergenic
TACGCGGGTAAAGCACCTAA+AGG 0.558141 3.1:-71023847 MS.gene02590:CDS
GAGATCGTGACACGTGGAGG+TGG 0.558979 3.1:-71023120 MS.gene02590:CDS
CTTCTTATGGAGAAAAGGAA+TGG 0.562020 3.1:-71024014 MS.gene02590:CDS
TTTGGGTACTTTCTGTCTCG+TGG 0.562928 3.1:+71023979 None:intergenic
GTGCTCCGAACAGCTCGAAT+CGG 0.563123 3.1:+71023008 None:intergenic
TGCCGTATTTACAACAAGAA+GGG 0.564535 3.1:-71023219 MS.gene02590:CDS
ATCACCGGAGTTTGCAAGTG+AGG 0.564595 3.1:-71022980 MS.gene02590:CDS
AACATTCTGAAATCGAAGAC+AGG 0.566257 3.1:-71023149 MS.gene02590:CDS
GTGGATGCCACCCTGAACAC+TGG 0.570340 3.1:-71022898 MS.gene02590:CDS
GATTTACCTGGGAGGTCCCA+AGG 0.574322 3.1:+71024197 None:intergenic
GCCCGGTGGTAATTGAAGCT+CGG 0.575509 3.1:+71024334 None:intergenic
TGAAATCGAAGACAGGAAGC+CGG 0.575677 3.1:-71023142 MS.gene02590:CDS
ATCACGAGCTCCTCATCCGT+TGG 0.576098 3.1:+71024299 None:intergenic
AATATCCAGACCCAGCCGCC+CGG 0.582754 3.1:+71023941 None:intergenic
TATGATCCTTGGGACCTCCC+AGG 0.585959 3.1:-71024203 MS.gene02590:intron
AGATCAATTTCAGCGATGAT+CGG 0.587191 3.1:+71024233 None:intergenic
CGAGACAGAAAGTACCCAAA+CGG 0.588955 3.1:-71023976 MS.gene02590:CDS
TACATGAACATATCTTGCAA+TGG 0.597049 3.1:+71022853 None:intergenic
GTTGGATGGAATCTGAAGCC+CGG 0.600613 3.1:+71024317 None:intergenic
TGGATATTGGAAGGCAACCG+GGG 0.604916 3.1:-71023926 MS.gene02590:CDS
ATAGGTCACCCTAAACCGGT+TGG 0.608554 3.1:-71023892 MS.gene02590:CDS
GTTTGCGGCGGAGGATGTGG+CGG 0.614306 3.1:+71023093 None:intergenic
TCCGAGCTTCAATTACCACC+GGG 0.623307 3.1:-71024335 MS.gene02590:CDS
TGAATTTCCTTATAATTACG+TGG 0.635048 3.1:-71022917 MS.gene02590:CDS
AAGCCGGAGATCGTGACACG+TGG 0.637296 3.1:-71023126 MS.gene02590:CDS
TTCGAGCTGTTCGGAGCACG+TGG 0.644987 3.1:-71023004 MS.gene02590:CDS
ATTCCAGCCGTAGTTTGCGG+CGG 0.647744 3.1:+71023081 None:intergenic
GGGCTTCAGATTCCATCCAA+CGG 0.653227 3.1:-71024315 MS.gene02590:CDS
CCGGAGATCGTGACACGTGG+AGG 0.654065 3.1:-71023123 MS.gene02590:CDS
GGCTGGGTCTGGATATTGGA+AGG 0.659634 3.1:-71023935 MS.gene02590:CDS
ATTGAGAAACAACCAAGCAA+CGG 0.677131 3.1:-71023192 MS.gene02590:CDS
AATTTCAGCGATGATCGGAA+CGG 0.679262 3.1:+71024238 None:intergenic
CGGTTCAAGGCCGAACCGGG+CGG 0.700064 3.1:-71023956 MS.gene02590:CDS
ATCCATGTGATTTACCTGGG+AGG 0.702963 3.1:+71024189 None:intergenic
ATATTGGAAGGCAACCGGGG+CGG 0.704098 3.1:-71023923 MS.gene02590:CDS
GGATGGAATCTGAAGCCCGG+TGG 0.713450 3.1:+71024320 None:intergenic
GCCAAAACCAGTGTTCAGGG+TGG 0.722298 3.1:+71022891 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTATTATGTTAAATATT+TGG - chr3.1:71023862-71023881 MS.gene02590:CDS 10.0%
!!! TTGATATTATGTTATTTTAT+AGG - chr3.1:71023133-71023152 MS.gene02590:CDS 10.0%
!! AAAACATGAAATTGATTAAA+TGG - chr3.1:71023901-71023920 MS.gene02590:CDS 15.0%
!! AAATGGAAAATAATAATAAG+TGG + chr3.1:71023772-71023791 None:intergenic 15.0%
!!! ATTATGTTATTTTATAGGTA+TGG - chr3.1:71023138-71023157 MS.gene02590:CDS 15.0%
!!! CTTAATTCTAAAAATTAGAA+GGG + chr3.1:71023456-71023475 None:intergenic 15.0%
!!! TCTTAATTCTAAAAATTAGA+AGG + chr3.1:71023457-71023476 None:intergenic 15.0%
!! ATCTATATAAATATGATCCT+TGG - chr3.1:71022961-71022980 MS.gene02590:CDS 20.0%
!! TCTATATAAATATGATCCTT+GGG - chr3.1:71022962-71022981 MS.gene02590:CDS 20.0%
!!! AGTTTGACTTGAATTTTATT+AGG - chr3.1:71023825-71023844 MS.gene02590:CDS 20.0%
!!! ATCAATTTCATGTTTTTCTA+AGG + chr3.1:71023897-71023916 None:intergenic 20.0%
! CGTAATTATAAGGAAATTCA+AGG + chr3.1:71024258-71024277 None:intergenic 25.0%
! GGAAAATAATAATAAGTGGT+TGG + chr3.1:71023768-71023787 None:intergenic 25.0%
! TGAATTTCCTTATAATTACG+TGG - chr3.1:71024258-71024277 MS.gene02590:CDS 25.0%
!! GATGTTACTATTCTTCATTT+TGG + chr3.1:71023701-71023720 None:intergenic 25.0%
!! TTTGTTGAAAACTACCATTT+TGG - chr3.1:71023493-71023512 MS.gene02590:intron 25.0%
!!! TTTCAGAATGTTCTGTTTTT+CGG + chr3.1:71024018-71024037 None:intergenic 25.0%
ATTGGTCCAAATTAAAAGAC+AGG + chr3.1:71023530-71023549 None:intergenic 30.0%
ATTTGGACCAATCAATGATT+TGG - chr3.1:71023538-71023557 MS.gene02590:intron 30.0%
CTAAAGGTGATAAAACCAAT+TGG - chr3.1:71023344-71023363 MS.gene02590:intron 30.0%
CTCTTGATTGATATACTTTG+TGG - chr3.1:71023632-71023651 MS.gene02590:intron 30.0%
GTGATGTGATGTTAATACTT+AGG + chr3.1:71023671-71023690 None:intergenic 30.0%
TACATGAACATATCTTGCAA+TGG + chr3.1:71024325-71024344 None:intergenic 30.0%
TTGGTCCAAATTAAAAGACA+GGG + chr3.1:71023529-71023548 None:intergenic 30.0%
TTTATAGGTATGGCTTCTTA+TGG - chr3.1:71023148-71023167 MS.gene02590:CDS 30.0%
! GATTTTACAGTTGGATGATT+GGG - chr3.1:71023928-71023947 MS.gene02590:CDS 30.0%
! TGATTTTACAGTTGGATGAT+TGG - chr3.1:71023927-71023946 MS.gene02590:CDS 30.0%
!! TATACTTTGTGGCTGATTTT+CGG - chr3.1:71023643-71023662 MS.gene02590:intron 30.0%
!!! AATGGTTCTGATTTTACAGT+TGG - chr3.1:71023919-71023938 MS.gene02590:CDS 30.0%
!!! CAATTGGTTTTATCACCTTT+AGG + chr3.1:71023346-71023365 None:intergenic 30.0%
!!! CTTGCAATGGATTAGTATTT+TGG + chr3.1:71024312-71024331 None:intergenic 30.0%
AAAGCTTTCTTGATTCCAAC+CGG + chr3.1:71023301-71023320 None:intergenic 35.0%
AATGATCCATGTGATTTACC+TGG + chr3.1:71022993-71023012 None:intergenic 35.0%
AGATCAATTTCAGCGATGAT+CGG + chr3.1:71022945-71022964 None:intergenic 35.0%
ATGATCCATGTGATTTACCT+GGG + chr3.1:71022992-71023011 None:intergenic 35.0%
ATTGAGAAACAACCAAGCAA+CGG - chr3.1:71023983-71024002 MS.gene02590:CDS 35.0%
CAAGAGTTATCAACTAGTGA+AGG + chr3.1:71023618-71023637 None:intergenic 35.0%
CTTCTTATGGAGAAAAGGAA+TGG - chr3.1:71023161-71023180 MS.gene02590:CDS 35.0%
TATGGCTTCTTATGGAGAAA+AGG - chr3.1:71023156-71023175 MS.gene02590:CDS 35.0%
TATGTGTGATAACTACACCA+AGG - chr3.1:71023590-71023609 MS.gene02590:intron 35.0%
TCGCAAAAAGAACAGCTTAA+GGG - chr3.1:71023408-71023427 MS.gene02590:intron 35.0%
TGCCGTATTTACAACAAGAA+GGG - chr3.1:71023956-71023975 MS.gene02590:CDS 35.0%
TGGTCCAAATTAAAAGACAG+GGG + chr3.1:71023528-71023547 None:intergenic 35.0%
TTCGCAAAAAGAACAGCTTA+AGG - chr3.1:71023407-71023426 MS.gene02590:intron 35.0%
TTGCCGTATTTACAACAAGA+AGG - chr3.1:71023955-71023974 MS.gene02590:CDS 35.0%
! TAAGCTGTTCTTTTTGCGAA+TGG + chr3.1:71023407-71023426 None:intergenic 35.0%
! TGCCCTTCTTGTTGTAAATA+CGG + chr3.1:71023961-71023980 None:intergenic 35.0%
!! AACATTCTGAAATCGAAGAC+AGG - chr3.1:71024026-71024045 MS.gene02590:intron 35.0%
AATTTCAGCGATGATCGGAA+CGG + chr3.1:71022940-71022959 None:intergenic 40.0%
ATACTCGTGCATGATCCAAT+TGG + chr3.1:71023362-71023381 None:intergenic 40.0%
ATCAACTAGTGAAGGTTCCT+TGG + chr3.1:71023610-71023629 None:intergenic 40.0%
GCGTCAACCAAATCATTGAT+TGG + chr3.1:71023548-71023567 None:intergenic 40.0%
GGTTGGAATCAAGAAAGCTT+TGG - chr3.1:71023300-71023319 MS.gene02590:intron 40.0%
GTGGCATCCACGTAATTATA+AGG + chr3.1:71024268-71024287 None:intergenic 40.0%
TGAGCCTAAGTGGAATGAAT+GGG - chr3.1:71024225-71024244 MS.gene02590:CDS 40.0%
TTCTCCCATTCATTCCACTT+AGG + chr3.1:71024232-71024251 None:intergenic 40.0%
! TCTTGATTCCAACCGGTTTA+GGG + chr3.1:71023294-71023313 None:intergenic 40.0%
! TTCTTGATTCCAACCGGTTT+AGG + chr3.1:71023295-71023314 None:intergenic 40.0%
!! AAAACTACCATTTTGGCCCT+TGG - chr3.1:71023500-71023519 MS.gene02590:intron 40.0%
!! AAACTACCATTTTGGCCCTT+GGG - chr3.1:71023501-71023520 MS.gene02590:intron 40.0%
!! TGATTTGGTTGACGCAAATG+TGG - chr3.1:71023553-71023572 MS.gene02590:intron 40.0%
!!! AAAGCTTTGGTGTTTTACGC+GGG - chr3.1:71023313-71023332 MS.gene02590:intron 40.0%
!!! GAAAGCTTTGGTGTTTTACG+CGG - chr3.1:71023312-71023331 MS.gene02590:intron 40.0%
ACCAATAGGTCACCCTAAAC+CGG - chr3.1:71023279-71023298 MS.gene02590:intron 45.0%
ATCCATGTGATTTACCTGGG+AGG + chr3.1:71022989-71023008 None:intergenic 45.0%
ATCCGAGCTTCAATTACCAC+CGG - chr3.1:71022839-71022858 MS.gene02590:CDS 45.0%
ATTAAAAGACAGGGGACCCA+AGG + chr3.1:71023520-71023539 None:intergenic 45.0%
CTAATTCCAGCCGTAGTTTG+CGG + chr3.1:71024100-71024119 None:intergenic 45.0%
GAAGCCAAAACCAGTGTTCA+GGG + chr3.1:71024290-71024309 None:intergenic 45.0%
GCAAACTACGGCTGGAATTA+GGG - chr3.1:71024099-71024118 MS.gene02590:intron 45.0%
GTGAGCCTAAGTGGAATGAA+TGG - chr3.1:71024224-71024243 MS.gene02590:CDS 45.0%
TCTGGATATTGGAAGGCAAC+CGG - chr3.1:71023247-71023266 MS.gene02590:intron 45.0%
TGAAATCGAAGACAGGAAGC+CGG - chr3.1:71024033-71024052 MS.gene02590:intron 45.0%
TTAAAAGACAGGGGACCCAA+GGG + chr3.1:71023519-71023538 None:intergenic 45.0%
TTTGGGTACTTTCTGTCTCG+TGG + chr3.1:71023199-71023218 None:intergenic 45.0%
! GATCATGCACGAGTATCGTT+TGG - chr3.1:71023366-71023385 MS.gene02590:intron 45.0%
!! CGAGACAGAAAGTACCCAAA+CGG - chr3.1:71023199-71023218 MS.gene02590:CDS 45.0%
!! GAAAGTACCCAAACGGTTCA+AGG - chr3.1:71023206-71023225 MS.gene02590:CDS 45.0%
!! GGGTCCCCTGTCTTTTAATT+TGG - chr3.1:71023521-71023540 MS.gene02590:intron 45.0%
!! AAATAAATAAATTCTATAAA+TGG + chr3.1:71023789-71023808 None:intergenic 5.0%
ATAGGTCACCCTAAACCGGT+TGG - chr3.1:71023283-71023302 MS.gene02590:intron 50.0%
ATCACCGGAGTTTGCAAGTG+AGG - chr3.1:71024195-71024214 MS.gene02590:intron 50.0%
CAGATTCCATCCAACGGATG+AGG - chr3.1:71022866-71022885 MS.gene02590:CDS 50.0%
CGCAAACTACGGCTGGAATT+AGG - chr3.1:71024098-71024117 MS.gene02590:intron 50.0%
CTGGATATTGGAAGGCAACC+GGG - chr3.1:71023248-71023267 MS.gene02590:intron 50.0%
GACCTCCCAGGTAAATCACA+TGG - chr3.1:71022984-71023003 MS.gene02590:CDS 50.0%
GGAAGCCAAAACCAGTGTTC+AGG + chr3.1:71024291-71024310 None:intergenic 50.0%
GGGCTTCAGATTCCATCCAA+CGG - chr3.1:71022860-71022879 MS.gene02590:CDS 50.0%
TCCGAGCTTCAATTACCACC+GGG - chr3.1:71022840-71022859 MS.gene02590:CDS 50.0%
TGCACCTCACTTGCAAACTC+CGG + chr3.1:71024202-71024221 None:intergenic 50.0%
TGGATATTGGAAGGCAACCG+GGG - chr3.1:71023249-71023268 MS.gene02590:intron 50.0%
! ACCGGTTTAGGGTGACCTAT+TGG + chr3.1:71023283-71023302 None:intergenic 50.0%
! GTTGGATGGAATCTGAAGCC+CGG + chr3.1:71022861-71022880 None:intergenic 50.0%
! TACGCGGGTAAAGCACCTAA+AGG - chr3.1:71023328-71023347 MS.gene02590:intron 50.0%
!! ACCTATTGGTTTATCCGCCC+CGG + chr3.1:71023269-71023288 None:intergenic 50.0%
AAACGGTTCAAGGCCGAACC+GGG - chr3.1:71023216-71023235 MS.gene02590:CDS 55.0%
ACATCCTCCGCCGCAAACTA+CGG - chr3.1:71024087-71024106 MS.gene02590:intron 55.0%
ACCGGGGCGGATAAACCAAT+AGG - chr3.1:71023265-71023284 MS.gene02590:intron 55.0%
AGGTGCAGAGTGAGCCTAAG+TGG - chr3.1:71024215-71024234 MS.gene02590:CDS 55.0%
ATATTGGAAGGCAACCGGGG+CGG - chr3.1:71023252-71023271 MS.gene02590:intron 55.0%
ATCACGAGCTCCTCATCCGT+TGG + chr3.1:71022879-71022898 None:intergenic 55.0%
CAAACGGTTCAAGGCCGAAC+CGG - chr3.1:71023215-71023234 MS.gene02590:CDS 55.0%
CGGCTAACAACACCGTTGCT+TGG + chr3.1:71023998-71024017 None:intergenic 55.0%
CTCGAATCGGTGTGCAGCTT+AGG + chr3.1:71024157-71024176 None:intergenic 55.0%
GATTTACCTGGGAGGTCCCA+AGG + chr3.1:71022981-71023000 None:intergenic 55.0%
GCCAAAACCAGTGTTCAGGG+TGG + chr3.1:71024287-71024306 None:intergenic 55.0%
GCCCGGTGGTAATTGAAGCT+CGG + chr3.1:71022844-71022863 None:intergenic 55.0%
GGCTGGGTCTGGATATTGGA+AGG - chr3.1:71023240-71023259 MS.gene02590:CDS 55.0%
GGTTCGGCCTTGAACCGTTT+GGG + chr3.1:71023216-71023235 None:intergenic 55.0%
GTGCTCCGAACAGCTCGAAT+CGG + chr3.1:71024170-71024189 None:intergenic 55.0%
TAGGCTGCGACGTGCATTTG+CGG + chr3.1:71022914-71022933 None:intergenic 55.0%
TATGATCCTTGGGACCTCCC+AGG - chr3.1:71022972-71022991 MS.gene02590:CDS 55.0%
TTCGGAGCACGTGGTATCAC+CGG - chr3.1:71024180-71024199 MS.gene02590:intron 55.0%
! ATTCCAGCCGTAGTTTGCGG+CGG + chr3.1:71024097-71024116 None:intergenic 55.0%
!! GCACACCGATTCGAGCTGTT+CGG - chr3.1:71024162-71024181 MS.gene02590:intron 55.0%
!!! GCCACCCTGAACACTGGTTT+TGG - chr3.1:71024283-71024302 MS.gene02590:CDS 55.0%
AAGCCGGAGATCGTGACACG+TGG - chr3.1:71024049-71024068 MS.gene02590:intron 60.0%
AATATCCAGACCCAGCCGCC+CGG + chr3.1:71023237-71023256 None:intergenic 60.0%
AGGGGACCCAAGGGCCAAAA+TGG + chr3.1:71023510-71023529 None:intergenic 60.0%
CCTCCACGTGTCACGATCTC+CGG + chr3.1:71024055-71024074 None:intergenic 60.0%
CGAGCTCCTCATCCGTTGGA+TGG + chr3.1:71022875-71022894 None:intergenic 60.0%
GAGATCGTGACACGTGGAGG+TGG - chr3.1:71024055-71024074 MS.gene02590:intron 60.0%
GCGATGATCGGAACGGCGAT+AGG + chr3.1:71022933-71022952 None:intergenic 60.0%
GTGGATGCCACCCTGAACAC+TGG - chr3.1:71024277-71024296 MS.gene02590:CDS 60.0%
TTCGAGCTGTTCGGAGCACG+TGG - chr3.1:71024171-71024190 MS.gene02590:intron 60.0%
! CGGTTCGGCCTTGAACCGTT+TGG + chr3.1:71023217-71023236 None:intergenic 60.0%
! GGATGGAATCTGAAGCCCGG+TGG + chr3.1:71022858-71022877 None:intergenic 60.0%
! GTAGTTTGCGGCGGAGGATG+TGG + chr3.1:71024088-71024107 None:intergenic 60.0%
CCGGAGATCGTGACACGTGG+AGG - chr3.1:71024052-71024071 MS.gene02590:intron 65.0%
GGGCGGCTGGGTCTGGATAT+TGG - chr3.1:71023236-71023255 MS.gene02590:CDS 65.0%
GTTTGCGGCGGAGGATGTGG+CGG + chr3.1:71024085-71024104 None:intergenic 65.0%
CCTCCGCCGCAAACTACGGC+TGG - chr3.1:71024091-71024110 MS.gene02590:intron 70.0%
CGGTTCAAGGCCGAACCGGG+CGG - chr3.1:71023219-71023238 MS.gene02590:CDS 70.0%
! CCAGCCGTAGTTTGCGGCGG+AGG + chr3.1:71024094-71024113 None:intergenic 70.0%
CAAGGCCGAACCGGGCGGCT+GGG - chr3.1:71023224-71023243 MS.gene02590:CDS 75.0%
CCAGACCCAGCCGCCCGGTT+CGG + chr3.1:71023232-71023251 None:intergenic 75.0%
TCAAGGCCGAACCGGGCGGC+TGG - chr3.1:71023223-71023242 MS.gene02590:CDS 75.0%
! CCGAACCGGGCGGCTGGGTC+TGG - chr3.1:71023229-71023248 MS.gene02590:CDS 80.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 71022834 71024363 71022834 ID=MS.gene02590
chr3.1 mRNA 71022834 71024363 71022834 ID=MS.gene02590.t1;Parent=MS.gene02590
chr3.1 exon 71024204 71024363 71024204 ID=MS.gene02590.t1.exon1;Parent=MS.gene02590.t1
chr3.1 CDS 71024204 71024363 71024204 ID=cds.MS.gene02590.t1;Parent=MS.gene02590.t1
chr3.1 exon 71023768 71024042 71023768 ID=MS.gene02590.t1.exon2;Parent=MS.gene02590.t1
chr3.1 CDS 71023768 71024042 71023768 ID=cds.MS.gene02590.t1;Parent=MS.gene02590.t1
chr3.1 exon 71022834 71023259 71022834 ID=MS.gene02590.t1.exon3;Parent=MS.gene02590.t1
chr3.1 CDS 71022834 71023259 71022834 ID=cds.MS.gene02590.t1;Parent=MS.gene02590.t1
Gene Sequence

>MS.gene02590

ATGGCATCCGAGCTTCAATTACCACCGGGCTTCAGATTCCATCCAACGGATGAGGAGCTCGTGATGCACTATCTCTGCCGCAAATGCACGTCGCAGCCTATCGCCGTTCCGATCATCGCTGAAATTGATCTATATAAATATGATCCTTGGGACCTCCCAGGTAAATCACATGGATCATTGTAATTACTTTTTTGTAGCTTGTAAATTTTATTTTGACATATGTACAGTGATATCAAACAAAAGCTTGATCTTTTTGTATAACTATTGTATTTTCAATTAAATATAAAATTTTAATTTTATTGATATTATGTTATTTTATAGGTATGGCTTCTTATGGAGAAAAGGAATGGTACTTTTTCTCGCCACGAGACAGAAAGTACCCAAACGGTTCAAGGCCGAACCGGGCGGCTGGGTCTGGATATTGGAAGGCAACCGGGGCGGATAAACCAATAGGTCACCCTAAACCGGTTGGAATCAAGAAAGCTTTGGTGTTTTACGCGGGTAAAGCACCTAAAGGTGATAAAACCAATTGGATCATGCACGAGTATCGTTTGGCTGATGTAGATCGCACCATTCGCAAAAAGAACAGCTTAAGGGTATAAATAAATATTCGCATTTACCCTTCTAATTTTTAGAATTAAGATCAAAGTTTTGTGATATTTGTTGAAAACTACCATTTTGGCCCTTGGGTCCCCTGTCTTTTAATTTGGACCAATCAATGATTTGGTTGACGCAAATGTGGTTACACTTTTTTATTATGTGTGATAACTACACCAAGGAACCTTCACTAGTTGATAACTCTTGATTGATATACTTTGTGGCTGATTTTCGGATCCTAAGTATTAACATCACATCACATTATTTCCAAAATGAAGAATAGTAACATCACATTAAATCAGACAATTAATGAGATAATATTGAAAGTCATCTGCCAACCACTTATTATTATTTTCCATTTATAGAATTTATTTATTTCTACTTATCTGTTTGAAGTTTGACTTGAATTTTATTAGGAAATAGTATTTAGTCTTTTATTATGTTAAATATTTGGATTTATTTTCCTTAGAAAAACATGAAATTGATTAAATGGTTCTGATTTTACAGTTGGATGATTGGGTGCTTTGCCGTATTTACAACAAGAAGGGCACAATTGAGAAACAACCAAGCAACGGTGTTGTTAGCCGAAAAACAGAACATTCTGAAATCGAAGACAGGAAGCCGGAGATCGTGACACGTGGAGGTGGTCTTCCGCCACATCCTCCGCCGCAAACTACGGCTGGAATTAGGGATTACATGTACTTTGACACATCAGATTCGATTCCTAAGCTGCACACCGATTCGAGCTGTTCGGAGCACGTGGTATCACCGGAGTTTGCAAGTGAGGTGCAGAGTGAGCCTAAGTGGAATGAATGGGAGAAGAACCTTGAATTTCCTTATAATTACGTGGATGCCACCCTGAACACTGGTTTTGGCTTCCAAAATACTAATCCATTGCAAGATATGTTCATGTACTTGCCCAAAACCTTTTGA
Protein sequence

>MS.gene02590.t1

MASELQLPPGFRFHPTDEELVMHYLCRKCTSQPIAVPIIAEIDLYKYDPWDLPGMASYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIGHPKPVGIKKALVFYAGKAPKGDKTNWIMHEYRLADVDRTIRKKNSLRLDDWVLCRIYNKKGTIEKQPSNGVVSRKTEHSEIEDRKPEIVTRGGGLPPHPPPQTTAGIRDYMYFDTSDSIPKLHTDSSCSEHVVSPEFASEVQSEPKWNEWEKNLEFPYNYVDATLNTGFGFQNTNPLQDMFMYLPKTF