Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026322.t1 | XP_024630388.1 | 84.2 | 298 | 40 | 2 | 1 | 293 | 89 | 384 | 1.50E-120 | 442.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026322.t1 | A0A072VFJ7 | 81.6 | 305 | 44 | 2 | 1 | 293 | 89 | 393 | 5.3e-120 | 440.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene026322.t1 | TF | B3 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026322.t1 | MTR_1g035570 | 79.412 | 306 | 51 | 2 | 1 | 294 | 89 | 394 | 7.84e-169 | 474 |
MS.gene026322.t1 | MTR_1g035490 | 63.863 | 321 | 65 | 7 | 16 | 293 | 15 | 327 | 1.45e-127 | 367 |
MS.gene026322.t1 | MTR_1g035620 | 42.025 | 326 | 146 | 9 | 1 | 293 | 93 | 408 | 4.27e-66 | 213 |
MS.gene026322.t1 | MTR_1g035640 | 33.938 | 386 | 153 | 11 | 1 | 294 | 89 | 464 | 8.29e-51 | 174 |
MS.gene026322.t1 | MTR_1g050845 | 40.206 | 291 | 119 | 9 | 1 | 258 | 93 | 361 | 7.24e-45 | 162 |
MS.gene026322.t1 | MTR_6g061070 | 35.317 | 252 | 114 | 6 | 88 | 293 | 221 | 469 | 1.62e-34 | 130 |
MS.gene026322.t1 | MTR_1g035520 | 42.391 | 92 | 49 | 2 | 206 | 293 | 291 | 382 | 4.03e-14 | 72.4 |
MS.gene026322.t1 | MTR_5g044670 | 27.830 | 212 | 128 | 6 | 1 | 192 | 102 | 308 | 9.76e-14 | 70.9 |
MS.gene026322.t1 | MTR_8g103940 | 33.083 | 133 | 73 | 6 | 74 | 197 | 217 | 342 | 2.81e-12 | 67.4 |
MS.gene026322.t1 | MTR_7g050710 | 27.650 | 217 | 119 | 7 | 1 | 187 | 99 | 307 | 1.09e-11 | 64.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 61 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATTTGCTGTGCTTCTTTA+AGG | 0.097830 | 1.1:+19934288 | MS.gene026322:CDS |
CTTTGGGATTGCTTCGTTTC+CGG | 0.165431 | 1.1:-19933606 | None:intergenic |
TTAAAACCTAGTAGTTTCTT+TGG | 0.230973 | 1.1:-19933623 | None:intergenic |
TTAATGGAACTGCAACAATA+AGG | 0.270673 | 1.1:+19933405 | MS.gene026322:CDS |
TTCATCAACTGATTTGATAT+TGG | 0.273749 | 1.1:-19932730 | None:intergenic |
ACATAACACATTCAAGGTTT+TGG | 0.285361 | 1.1:+19933936 | MS.gene026322:CDS |
TTGGAGATACTTGTCTCTTT+AGG | 0.296651 | 1.1:+19934231 | MS.gene026322:CDS |
TTACGTCAATGGCTATTTCT+TGG | 0.299414 | 1.1:+19933269 | MS.gene026322:CDS |
CTTGCCCTTTGAACTTGCTT+TGG | 0.300449 | 1.1:-19932840 | None:intergenic |
GTGGTGGTTGGAAAATATTC+AGG | 0.328531 | 1.1:+19933495 | MS.gene026322:CDS |
TTATAAAGAAAGATCTTGTT+TGG | 0.355178 | 1.1:+19933472 | MS.gene026322:CDS |
GAGGTTAGTTTGAGGTATTA+TGG | 0.363534 | 1.1:+19933449 | MS.gene026322:CDS |
TAAAACCTAGTAGTTTCTTT+GGG | 0.368375 | 1.1:-19933622 | None:intergenic |
TAATGGAACTGCAACAATAA+GGG | 0.385781 | 1.1:+19933406 | MS.gene026322:CDS |
ATAATTTATTTCTAAAGTAT+TGG | 0.398912 | 1.1:-19932706 | None:intergenic |
ATTGTGACAATGAATGAAAA+AGG | 0.410109 | 1.1:-19933575 | None:intergenic |
GCAAGTTCAAAGGGCAAGAA+AGG | 0.419471 | 1.1:+19932845 | MS.gene026322:CDS |
ACAGCTTCAGATTGTGCCAT+TGG | 0.421914 | 1.1:-19933207 | None:intergenic |
GTGTTATGTTTCATCACATC+AGG | 0.425287 | 1.1:-19933922 | None:intergenic |
TATAAAGAAAGATCTTGTTT+GGG | 0.427295 | 1.1:+19933473 | MS.gene026322:CDS |
GATGAAACATAACACATTCA+AGG | 0.454763 | 1.1:+19933930 | MS.gene026322:CDS |
CAGCTTCAGATTGTGCCATT+GGG | 0.460205 | 1.1:-19933206 | None:intergenic |
AAAGAATGCAATGTGGAGAT+TGG | 0.464528 | 1.1:+19934212 | MS.gene026322:CDS |
TGTCATTATAACTTCAAAAG+AGG | 0.475259 | 1.1:-19933241 | None:intergenic |
AGTATTCGTGGCTGTAGGTT+CGG | 0.481056 | 1.1:+19934167 | MS.gene026322:CDS |
GCTGTAGGTTCGGTAAAGAT+TGG | 0.487428 | 1.1:+19934177 | MS.gene026322:CDS |
GGTGCTGAAGCCACTGAAGA+AGG | 0.489506 | 1.1:+19932753 | MS.gene026322:CDS |
CCAAAGGAGTTTATGAAAAG+AGG | 0.490308 | 1.1:+19934074 | MS.gene026322:CDS |
GCAATCCCAAAGAAACTACT+AGG | 0.493084 | 1.1:+19933617 | MS.gene026322:CDS |
GATCTTGTTTGGGTGGTGGT+TGG | 0.501988 | 1.1:+19933483 | MS.gene026322:CDS |
GTCATTATAACTTCAAAAGA+GGG | 0.507540 | 1.1:-19933240 | None:intergenic |
GGAGTGTGGAGGTTAGTTTG+AGG | 0.513468 | 1.1:+19933441 | MS.gene026322:CDS |
ACTTTCTTTACCTTCTTCAG+TGG | 0.514754 | 1.1:-19932763 | None:intergenic |
AACTATTATGAGAGTATTCG+TGG | 0.521105 | 1.1:+19934155 | MS.gene026322:CDS |
CTCATCACTCTCTTCTTCAG+TGG | 0.522716 | 1.1:-19932796 | None:intergenic |
TTTGGTGAAGAGCACAGCCC+CGG | 0.523538 | 1.1:+19933954 | MS.gene026322:CDS |
AGGATGTCATGAAAATATTG+TGG | 0.531604 | 1.1:+19934094 | MS.gene026322:CDS |
ATTGTCACAATTACTCGTGC+CGG | 0.532896 | 1.1:+19933587 | MS.gene026322:CDS |
ATGACACAATCTTACGTCAA+TGG | 0.537902 | 1.1:+19933258 | MS.gene026322:CDS |
AAAGAAAGATCTTGTTTGGG+TGG | 0.538945 | 1.1:+19933476 | MS.gene026322:CDS |
AATATCAAATCAGTTGATGA+AGG | 0.540855 | 1.1:+19932732 | MS.gene026322:CDS |
AAGGGCAAGAGAAAATTCTC+AGG | 0.544762 | 1.1:+19932864 | MS.gene026322:CDS |
GAAAGATCTTGTTTGGGTGG+TGG | 0.546468 | 1.1:+19933479 | MS.gene026322:CDS |
CAATAAGGGTTGGTAATGAA+AGG | 0.551596 | 1.1:+19933420 | MS.gene026322:CDS |
GAGTGATGAGAGTTCAGATG+AGG | 0.552149 | 1.1:+19932809 | MS.gene026322:CDS |
TCTTTAGGTTAATTGATGAA+AGG | 0.553116 | 1.1:+19934246 | MS.gene026322:CDS |
AATGCCAAAGCAAGTTCAAA+GGG | 0.555536 | 1.1:+19932836 | MS.gene026322:CDS |
CAAGTTCAAAGGGCAAGAAA+GGG | 0.556600 | 1.1:+19932846 | MS.gene026322:CDS |
GTAAATTTGAGATGATTCGA+CGG | 0.557247 | 1.1:+19933549 | MS.gene026322:CDS |
AAATGCCAAAGCAAGTTCAA+AGG | 0.559020 | 1.1:+19932835 | MS.gene026322:CDS |
GTATTTGCAGACTGTACCAA+AGG | 0.572448 | 1.1:+19934058 | MS.gene026322:intron |
GGAACTGCAACAATAAGGGT+TGG | 0.581562 | 1.1:+19933410 | MS.gene026322:CDS |
GAGAAAGTCATGGTTCGTAA+AGG | 0.590660 | 1.1:+19934130 | MS.gene026322:CDS |
AGAAGGTAAAGAAAGTGATG+AGG | 0.601536 | 1.1:+19932770 | MS.gene026322:CDS |
TGGTGGTTGGAAAATATTCA+GGG | 0.603185 | 1.1:+19933496 | MS.gene026322:CDS |
AGTTAGTAACAAAGTGAGCA+TGG | 0.605994 | 1.1:+19933164 | MS.gene026322:intron |
GGTTGGTAATGAAAGGAGTG+TGG | 0.615653 | 1.1:+19933427 | MS.gene026322:CDS |
ATGAGAGTATTCGTGGCTGT+AGG | 0.616385 | 1.1:+19934162 | MS.gene026322:CDS |
TGGTAATGAAAGGAGTGTGG+AGG | 0.642373 | 1.1:+19933430 | MS.gene026322:CDS |
GAAGCCTAGAAAATACCCAA+TGG | 0.693832 | 1.1:+19933191 | MS.gene026322:CDS |
ATTCATGAAAGAATGCAATG+TGG | 0.699756 | 1.1:+19934205 | MS.gene026322:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAATTTATTTCTAAAGTAT+TGG | - | chr1.1:19932709-19932728 | None:intergenic | 10.0% |
!!! | ATAAAAATATGTGACTTTTT+TGG | + | chr1.1:19933057-19933076 | MS.gene026322:intron | 15.0% |
!!! | CAAATATCTCTAAATTTTTT+GGG | + | chr1.1:19933840-19933859 | MS.gene026322:intron | 15.0% |
!!! | GAAAAATATAATTTTCAAGT+TGG | + | chr1.1:19933518-19933537 | MS.gene026322:CDS | 15.0% |
!!! | TCAAATATCTCTAAATTTTT+TGG | + | chr1.1:19933839-19933858 | MS.gene026322:intron | 15.0% |
!! | AAATATTGTGGAGTTAAAAA+TGG | + | chr1.1:19934106-19934125 | MS.gene026322:CDS | 20.0% |
!! | AATATTGTGGAGTTAAAAAT+GGG | + | chr1.1:19934107-19934126 | MS.gene026322:CDS | 20.0% |
!! | ATGAAAAAGGTTATAAGAAA+GGG | + | chr1.1:19933693-19933712 | MS.gene026322:intron | 20.0% |
!! | GATCACTTGAAAAAATTTAA+TGG | + | chr1.1:19933389-19933408 | MS.gene026322:CDS | 20.0% |
!! | TAAACATACAATATACAGTT+AGG | - | chr1.1:19933783-19933802 | None:intergenic | 20.0% |
!! | TATGAAAAAGGTTATAAGAA+AGG | + | chr1.1:19933692-19933711 | MS.gene026322:intron | 20.0% |
!! | TTATAAAGAAAGATCTTGTT+TGG | + | chr1.1:19933472-19933491 | MS.gene026322:CDS | 20.0% |
!!! | TATAAAGAAAGATCTTGTTT+GGG | + | chr1.1:19933473-19933492 | MS.gene026322:CDS | 20.0% |
!!! | TTTTATGTAATTAATCCTAC+CGG | - | chr1.1:19933976-19933995 | None:intergenic | 20.0% |
! | ATATTGTGGAGTTAAAAATG+GGG | + | chr1.1:19934108-19934127 | MS.gene026322:CDS | 25.0% |
! | ATTGTGACAATGAATGAAAA+AGG | - | chr1.1:19933578-19933597 | None:intergenic | 25.0% |
! | GTCATTATAACTTCAAAAGA+GGG | - | chr1.1:19933243-19933262 | None:intergenic | 25.0% |
! | TAAAACCTAGTAGTTTCTTT+GGG | - | chr1.1:19933625-19933644 | None:intergenic | 25.0% |
! | TGAAAAAGGTTATAAGAAAG+GGG | + | chr1.1:19933694-19933713 | MS.gene026322:intron | 25.0% |
! | TGTCATTATAACTTCAAAAG+AGG | - | chr1.1:19933244-19933263 | None:intergenic | 25.0% |
! | TTAAAACCTAGTAGTTTCTT+TGG | - | chr1.1:19933626-19933645 | None:intergenic | 25.0% |
! | TTTATGTAATTAATCCTACC+GGG | - | chr1.1:19933975-19933994 | None:intergenic | 25.0% |
!! | TCTTTAGGTTAATTGATGAA+AGG | + | chr1.1:19934246-19934265 | MS.gene026322:CDS | 25.0% |
!!! | AAATATGTGACTTTTTTGGA+AGG | + | chr1.1:19933061-19933080 | MS.gene026322:intron | 25.0% |
!!! | AATATCAAATCAGTTGATGA+AGG | + | chr1.1:19932732-19932751 | MS.gene026322:CDS | 25.0% |
!!! | TAATTGCTTTTAAGAGTCAA+TGG | + | chr1.1:19932932-19932951 | MS.gene026322:intron | 25.0% |
!!! | TTCATCAACTGATTTGATAT+TGG | - | chr1.1:19932733-19932752 | None:intergenic | 25.0% |
AGGATGTCATGAAAATATTG+TGG | + | chr1.1:19934094-19934113 | MS.gene026322:CDS | 30.0% | |
ATTCATGAAAGAATGCAATG+TGG | + | chr1.1:19934205-19934224 | MS.gene026322:CDS | 30.0% | |
CTAAAAAAGAAACTGAATCC+TGG | - | chr1.1:19933753-19933772 | None:intergenic | 30.0% | |
GATGAAACATAACACATTCA+AGG | + | chr1.1:19933930-19933949 | MS.gene026322:CDS | 30.0% | |
GTTTATGCCTATTGTATAGA+AGG | + | chr1.1:19933898-19933917 | MS.gene026322:intron | 30.0% | |
TAATGGAACTGCAACAATAA+GGG | + | chr1.1:19933406-19933425 | MS.gene026322:CDS | 30.0% | |
TCTGAAAGCTTGTAAATCTA+AGG | + | chr1.1:19932979-19932998 | MS.gene026322:intron | 30.0% | |
TGATCTCTTGAAAAATCACT+TGG | - | chr1.1:19933374-19933393 | None:intergenic | 30.0% | |
TTAATGGAACTGCAACAATA+AGG | + | chr1.1:19933405-19933424 | MS.gene026322:CDS | 30.0% | |
TTATGTAATTAATCCTACCG+GGG | - | chr1.1:19933974-19933993 | None:intergenic | 30.0% | |
! | ACATAACACATTCAAGGTTT+TGG | + | chr1.1:19933936-19933955 | MS.gene026322:CDS | 30.0% |
! | GTAAATTTGAGATGATTCGA+CGG | + | chr1.1:19933549-19933568 | MS.gene026322:CDS | 30.0% |
! | TAAACCATGATTTGAAACAG+TGG | + | chr1.1:19933345-19933364 | MS.gene026322:intron | 30.0% |
!! | AACTATTATGAGAGTATTCG+TGG | + | chr1.1:19934155-19934174 | MS.gene026322:CDS | 30.0% |
AAAGAATGCAATGTGGAGAT+TGG | + | chr1.1:19934212-19934231 | MS.gene026322:CDS | 35.0% | |
AAATGCCAAAGCAAGTTCAA+AGG | + | chr1.1:19932835-19932854 | MS.gene026322:CDS | 35.0% | |
AACTGAATCCTGGATAACTT+AGG | - | chr1.1:19933743-19933762 | None:intergenic | 35.0% | |
AATGCCAAAGCAAGTTCAAA+GGG | + | chr1.1:19932836-19932855 | MS.gene026322:CDS | 35.0% | |
ACTTTCTTTACCTTCTTCAG+TGG | - | chr1.1:19932766-19932785 | None:intergenic | 35.0% | |
AGAAGGTAAAGAAAGTGATG+AGG | + | chr1.1:19932770-19932789 | MS.gene026322:CDS | 35.0% | |
AGTTAGTAACAAAGTGAGCA+TGG | + | chr1.1:19933164-19933183 | MS.gene026322:intron | 35.0% | |
ATCAGGACCTTCTATACAAT+AGG | - | chr1.1:19933908-19933927 | None:intergenic | 35.0% | |
ATGACACAATCTTACGTCAA+TGG | + | chr1.1:19933258-19933277 | MS.gene026322:CDS | 35.0% | |
CCAAAGGAGTTTATGAAAAG+AGG | + | chr1.1:19934074-19934093 | MS.gene026322:CDS | 35.0% | |
GAAAATTCTCAGGTGAGTTT+AGG | + | chr1.1:19932874-19932893 | MS.gene026322:intron | 35.0% | |
GTAACCACTGTTTCAAATCA+TGG | - | chr1.1:19933352-19933371 | None:intergenic | 35.0% | |
GTGTTATGTTTCATCACATC+AGG | - | chr1.1:19933925-19933944 | None:intergenic | 35.0% | |
TAAAAATGGGGAGAAAGTCA+TGG | + | chr1.1:19934120-19934139 | MS.gene026322:CDS | 35.0% | |
TGGTGGTTGGAAAATATTCA+GGG | + | chr1.1:19933496-19933515 | MS.gene026322:CDS | 35.0% | |
TTGGAGATACTTGTCTCTTT+AGG | + | chr1.1:19934231-19934250 | MS.gene026322:CDS | 35.0% | |
! | AAAGAAAGATCTTGTTTGGG+TGG | + | chr1.1:19933476-19933495 | MS.gene026322:CDS | 35.0% |
! | CCTCTTTTCATAAACTCCTT+TGG | - | chr1.1:19934077-19934096 | None:intergenic | 35.0% |
!! | CAATAAGGGTTGGTAATGAA+AGG | + | chr1.1:19933420-19933439 | MS.gene026322:CDS | 35.0% |
!! | CAATTTGCTGTGCTTCTTTA+AGG | + | chr1.1:19934288-19934307 | MS.gene026322:CDS | 35.0% |
!! | GAGGTTAGTTTGAGGTATTA+TGG | + | chr1.1:19933449-19933468 | MS.gene026322:CDS | 35.0% |
!! | TTACGTCAATGGCTATTTCT+TGG | + | chr1.1:19933269-19933288 | MS.gene026322:CDS | 35.0% |
AAGGGCAAGAGAAAATTCTC+AGG | + | chr1.1:19932864-19932883 | MS.gene026322:CDS | 40.0% | |
ATTGTCACAATTACTCGTGC+CGG | + | chr1.1:19933587-19933606 | MS.gene026322:CDS | 40.0% | |
CAAGTTCAAAGGGCAAGAAA+GGG | + | chr1.1:19932846-19932865 | MS.gene026322:CDS | 40.0% | |
GAAGCCTAGAAAATACCCAA+TGG | + | chr1.1:19933191-19933210 | MS.gene026322:CDS | 40.0% | |
GAGAAAGTCATGGTTCGTAA+AGG | + | chr1.1:19934130-19934149 | MS.gene026322:CDS | 40.0% | |
GCAATCCCAAAGAAACTACT+AGG | + | chr1.1:19933617-19933636 | MS.gene026322:CDS | 40.0% | |
GTATTTGCAGACTGTACCAA+AGG | + | chr1.1:19934058-19934077 | MS.gene026322:intron | 40.0% | |
GTGGTGGTTGGAAAATATTC+AGG | + | chr1.1:19933495-19933514 | MS.gene026322:CDS | 40.0% | |
GTTAGTAGCCTAAGTTATCC+AGG | + | chr1.1:19933732-19933751 | MS.gene026322:intron | 40.0% | |
!! | TGTGCCATTGGGTATTTTCT+AGG | - | chr1.1:19933198-19933217 | None:intergenic | 40.0% |
ACAGCTTCAGATTGTGCCAT+TGG | - | chr1.1:19933210-19933229 | None:intergenic | 45.0% | |
AGTATTCGTGGCTGTAGGTT+CGG | + | chr1.1:19934167-19934186 | MS.gene026322:CDS | 45.0% | |
CTCATCACTCTCTTCTTCAG+TGG | - | chr1.1:19932799-19932818 | None:intergenic | 45.0% | |
GAGTGATGAGAGTTCAGATG+AGG | + | chr1.1:19932809-19932828 | MS.gene026322:CDS | 45.0% | |
GCAAGTTCAAAGGGCAAGAA+AGG | + | chr1.1:19932845-19932864 | MS.gene026322:CDS | 45.0% | |
GGAACTGCAACAATAAGGGT+TGG | + | chr1.1:19933410-19933429 | MS.gene026322:CDS | 45.0% | |
! | CAGCTTCAGATTGTGCCATT+GGG | - | chr1.1:19933209-19933228 | None:intergenic | 45.0% |
! | CTTGCCCTTTGAACTTGCTT+TGG | - | chr1.1:19932843-19932862 | None:intergenic | 45.0% |
! | GAAAGATCTTGTTTGGGTGG+TGG | + | chr1.1:19933479-19933498 | MS.gene026322:CDS | 45.0% |
! | GCTGTAGGTTCGGTAAAGAT+TGG | + | chr1.1:19934177-19934196 | MS.gene026322:CDS | 45.0% |
! | TGGTAATGAAAGGAGTGTGG+AGG | + | chr1.1:19933430-19933449 | MS.gene026322:CDS | 45.0% |
!! | ATGAGAGTATTCGTGGCTGT+AGG | + | chr1.1:19934162-19934181 | MS.gene026322:CDS | 45.0% |
!! | CTTTGGGATTGCTTCGTTTC+CGG | - | chr1.1:19933609-19933628 | None:intergenic | 45.0% |
!! | GGTTGGTAATGAAAGGAGTG+TGG | + | chr1.1:19933427-19933446 | MS.gene026322:CDS | 45.0% |
!! | TAATATATGATAAAAAAAAT+TGG | + | chr1.1:19933102-19933121 | MS.gene026322:intron | 5.0% |
!!! | TTATAATTTTTTTATGAAAA+AGG | + | chr1.1:19933680-19933699 | MS.gene026322:intron | 5.0% |
! | GATCTTGTTTGGGTGGTGGT+TGG | + | chr1.1:19933483-19933502 | MS.gene026322:CDS | 50.0% |
!! | GGAGTGTGGAGGTTAGTTTG+AGG | + | chr1.1:19933441-19933460 | MS.gene026322:CDS | 50.0% |
! | GGTGCTGAAGCCACTGAAGA+AGG | + | chr1.1:19932753-19932772 | MS.gene026322:CDS | 55.0% |
! | TTTGGTGAAGAGCACAGCCC+CGG | + | chr1.1:19933954-19933973 | MS.gene026322:CDS | 55.0% |
! | GTGAAGAGCACAGCCCCGGT+AGG | + | chr1.1:19933958-19933977 | MS.gene026322:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.1 | gene | 19932690 | 19934316 | 19932690 | ID=MS.gene026322 |
chr1.1 | mRNA | 19932690 | 19934316 | 19932690 | ID=MS.gene026322.t1;Parent=MS.gene026322 |
chr1.1 | exon | 19932690 | 19932885 | 19932690 | ID=MS.gene026322.t1.exon1;Parent=MS.gene026322.t1 |
chr1.1 | CDS | 19932690 | 19932885 | 19932690 | ID=cds.MS.gene026322.t1;Parent=MS.gene026322.t1 |
chr1.1 | exon | 19933166 | 19933290 | 19933166 | ID=MS.gene026322.t1.exon2;Parent=MS.gene026322.t1 |
chr1.1 | CDS | 19933166 | 19933290 | 19933166 | ID=cds.MS.gene026322.t1;Parent=MS.gene026322.t1 |
chr1.1 | exon | 19933365 | 19933638 | 19933365 | ID=MS.gene026322.t1.exon3;Parent=MS.gene026322.t1 |
chr1.1 | CDS | 19933365 | 19933638 | 19933365 | ID=cds.MS.gene026322.t1;Parent=MS.gene026322.t1 |
chr1.1 | exon | 19933917 | 19933975 | 19933917 | ID=MS.gene026322.t1.exon4;Parent=MS.gene026322.t1 |
chr1.1 | CDS | 19933917 | 19933975 | 19933917 | ID=cds.MS.gene026322.t1;Parent=MS.gene026322.t1 |
chr1.1 | exon | 19934068 | 19934316 | 19934068 | ID=MS.gene026322.t1.exon5;Parent=MS.gene026322.t1 |
chr1.1 | CDS | 19934068 | 19934316 | 19934068 | ID=cds.MS.gene026322.t1;Parent=MS.gene026322.t1 |
Gene Sequence |
Protein sequence |