Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026349.t1 | XP_013466751.1 | 86.9 | 528 | 59 | 4 | 4 | 521 | 51 | 578 | 4.50E-266 | 926.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026349.t1 | Q9T0G7 | 58.4 | 514 | 204 | 6 | 6 | 511 | 130 | 641 | 7.0e-175 | 615.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026349.t1 | A0A072VG77 | 86.9 | 528 | 59 | 4 | 4 | 521 | 51 | 578 | 3.2e-266 | 926.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene026349.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026349.t1 | MTR_1g035400 | 88.136 | 531 | 53 | 4 | 1 | 521 | 48 | 578 | 0.0 | 934 |
MS.gene026349.t1 | MTR_1g035420 | 83.752 | 517 | 83 | 1 | 6 | 521 | 143 | 659 | 0.0 | 887 |
MS.gene026349.t1 | MTR_8g070070 | 66.234 | 462 | 152 | 3 | 54 | 511 | 299 | 760 | 0.0 | 649 |
MS.gene026349.t1 | MTR_8g071030 | 55.596 | 554 | 201 | 5 | 3 | 511 | 187 | 740 | 0.0 | 625 |
MS.gene026349.t1 | MTR_8g070075 | 53.169 | 568 | 204 | 6 | 6 | 511 | 186 | 753 | 0.0 | 605 |
MS.gene026349.t1 | MTR_6g044690 | 55.258 | 523 | 195 | 10 | 15 | 509 | 54 | 565 | 0.0 | 558 |
MS.gene026349.t1 | MTR_0376s0030 | 51.124 | 534 | 221 | 10 | 16 | 521 | 57 | 578 | 9.34e-179 | 515 |
MS.gene026349.t1 | MTR_6g043960 | 50.485 | 515 | 195 | 11 | 23 | 509 | 1 | 483 | 6.56e-166 | 479 |
MS.gene026349.t1 | MTR_2g054460 | 47.619 | 525 | 183 | 13 | 15 | 509 | 3 | 465 | 5.40e-151 | 440 |
MS.gene026349.t1 | MTR_7g088370 | 39.798 | 495 | 276 | 10 | 21 | 509 | 203 | 681 | 1.69e-116 | 360 |
MS.gene026349.t1 | MTR_3g011440 | 36.647 | 513 | 283 | 14 | 21 | 509 | 141 | 635 | 9.91e-102 | 320 |
MS.gene026349.t1 | MTR_8g042750 | 38.370 | 503 | 284 | 13 | 21 | 508 | 167 | 658 | 1.21e-101 | 320 |
MS.gene026349.t1 | MTR_5g013420 | 36.576 | 514 | 298 | 13 | 3 | 506 | 563 | 1058 | 6.10e-96 | 314 |
MS.gene026349.t1 | MTR_5g013420 | 36.576 | 514 | 298 | 13 | 3 | 506 | 563 | 1058 | 6.14e-96 | 314 |
MS.gene026349.t1 | MTR_4g010830 | 34.483 | 522 | 313 | 13 | 3 | 514 | 455 | 957 | 4.80e-88 | 291 |
MS.gene026349.t1 | MTR_4g010550 | 33.824 | 476 | 256 | 14 | 47 | 513 | 15 | 440 | 4.35e-79 | 255 |
MS.gene026349.t1 | MTR_6g061270 | 35.611 | 483 | 284 | 11 | 52 | 514 | 196 | 671 | 2.01e-78 | 259 |
MS.gene026349.t1 | MTR_7g084090 | 35.141 | 498 | 285 | 13 | 52 | 520 | 258 | 746 | 2.69e-78 | 261 |
MS.gene026349.t1 | MTR_6g061200 | 33.745 | 486 | 278 | 12 | 52 | 520 | 196 | 654 | 2.76e-72 | 243 |
MS.gene026349.t1 | MTR_7g084090 | 38.827 | 358 | 203 | 8 | 52 | 397 | 258 | 611 | 3.46e-67 | 229 |
MS.gene026349.t1 | MTR_1g048950 | 31.524 | 479 | 269 | 14 | 50 | 506 | 66 | 507 | 2.99e-52 | 186 |
MS.gene026349.t1 | MTR_7g445710 | 29.132 | 484 | 246 | 15 | 55 | 514 | 110 | 520 | 5.88e-46 | 169 |
MS.gene026349.t1 | MTR_7g450730 | 29.670 | 455 | 232 | 14 | 55 | 507 | 107 | 475 | 9.89e-46 | 167 |
MS.gene026349.t1 | MTR_7g445530 | 28.931 | 477 | 242 | 15 | 55 | 507 | 110 | 513 | 1.76e-45 | 167 |
MS.gene026349.t1 | MTR_7g052480 | 31.677 | 322 | 201 | 8 | 215 | 520 | 227 | 545 | 2.22e-42 | 159 |
MS.gene026349.t1 | MTR_6g044000 | 42.500 | 120 | 51 | 1 | 23 | 124 | 1 | 120 | 1.05e-26 | 106 |
MS.gene026349.t1 | MTR_6g044000 | 59.259 | 54 | 22 | 0 | 456 | 509 | 117 | 170 | 3.19e-15 | 73.9 |
MS.gene026349.t1 | MTR_1g080340 | 26.774 | 310 | 156 | 11 | 258 | 511 | 269 | 563 | 7.76e-20 | 93.2 |
MS.gene026349.t1 | MTR_1g069570 | 25.566 | 309 | 160 | 10 | 258 | 511 | 430 | 723 | 5.51e-19 | 90.9 |
MS.gene026349.t1 | MTR_8g078490 | 27.431 | 288 | 152 | 12 | 258 | 506 | 960 | 1229 | 1.45e-17 | 87.0 |
MS.gene026349.t1 | MTR_5g018850 | 34.591 | 159 | 86 | 4 | 325 | 479 | 1312 | 1456 | 2.43e-16 | 83.2 |
MS.gene026349.t1 | MTR_4g132610 | 28.191 | 188 | 113 | 3 | 325 | 506 | 852 | 1023 | 2.79e-16 | 82.8 |
MS.gene026349.t1 | MTR_5g098680 | 33.974 | 156 | 90 | 3 | 80 | 229 | 267 | 415 | 3.00e-16 | 82.4 |
MS.gene026349.t1 | MTR_6g027690 | 30.097 | 206 | 117 | 7 | 304 | 507 | 217 | 397 | 2.14e-15 | 78.6 |
MS.gene026349.t1 | MTR_8g078505 | 29.032 | 186 | 112 | 3 | 325 | 506 | 346 | 515 | 2.80e-15 | 79.0 |
MS.gene026349.t1 | MTR_8g102580 | 31.410 | 156 | 94 | 3 | 80 | 229 | 261 | 409 | 1.23e-14 | 77.0 |
MS.gene026349.t1 | MTR_3g114910 | 30.000 | 150 | 94 | 3 | 80 | 229 | 187 | 325 | 2.77e-12 | 68.9 |
MS.gene026349.t1 | MTR_7g445810 | 33.121 | 157 | 89 | 5 | 55 | 208 | 123 | 266 | 2.45e-11 | 64.7 |
MS.gene026349.t1 | MTR_7g445600 | 32.540 | 126 | 74 | 3 | 55 | 180 | 106 | 220 | 3.15e-11 | 65.5 |
MS.gene026349.t1 | MTR_1g064770 | 42.188 | 64 | 36 | 1 | 337 | 399 | 28 | 91 | 3.91e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene026349.t1 | AT4G13460 | 58.171 | 514 | 205 | 6 | 6 | 511 | 130 | 641 | 0.0 | 613 |
MS.gene026349.t1 | AT4G13460 | 58.171 | 514 | 205 | 6 | 6 | 511 | 130 | 641 | 0.0 | 613 |
MS.gene026349.t1 | AT2G33290 | 55.078 | 512 | 223 | 4 | 6 | 512 | 134 | 643 | 0.0 | 582 |
MS.gene026349.t1 | AT2G33290 | 55.078 | 512 | 223 | 4 | 6 | 512 | 134 | 643 | 0.0 | 582 |
MS.gene026349.t1 | AT2G33290 | 55.078 | 512 | 223 | 4 | 6 | 512 | 134 | 643 | 0.0 | 582 |
MS.gene026349.t1 | AT2G33290 | 55.078 | 512 | 223 | 4 | 6 | 512 | 134 | 643 | 0.0 | 582 |
MS.gene026349.t1 | AT5G04940 | 36.694 | 496 | 296 | 11 | 21 | 508 | 155 | 640 | 1.36e-98 | 312 |
MS.gene026349.t1 | AT5G04940 | 36.694 | 496 | 296 | 11 | 21 | 508 | 155 | 640 | 1.36e-98 | 312 |
MS.gene026349.t1 | AT1G73100 | 37.924 | 472 | 275 | 10 | 56 | 519 | 189 | 650 | 2.19e-97 | 309 |
MS.gene026349.t1 | AT2G22740 | 34.325 | 504 | 299 | 12 | 21 | 506 | 270 | 759 | 2.50e-84 | 278 |
MS.gene026349.t1 | AT2G22740 | 34.325 | 504 | 299 | 12 | 21 | 506 | 270 | 759 | 2.50e-84 | 278 |
MS.gene026349.t1 | AT1G17770 | 36.042 | 480 | 271 | 14 | 57 | 514 | 209 | 674 | 5.73e-82 | 269 |
MS.gene026349.t1 | AT2G35160 | 33.984 | 512 | 287 | 14 | 8 | 506 | 254 | 727 | 3.28e-81 | 268 |
MS.gene026349.t1 | AT2G35160 | 33.984 | 512 | 287 | 14 | 8 | 506 | 290 | 763 | 4.67e-81 | 269 |
MS.gene026349.t1 | AT2G35160 | 33.984 | 512 | 287 | 14 | 8 | 506 | 290 | 763 | 4.67e-81 | 269 |
MS.gene026349.t1 | AT2G35160 | 33.984 | 512 | 287 | 14 | 8 | 506 | 290 | 763 | 4.67e-81 | 269 |
MS.gene026349.t1 | AT2G35160 | 33.984 | 512 | 287 | 14 | 8 | 506 | 290 | 763 | 4.67e-81 | 269 |
MS.gene026349.t1 | AT5G13960 | 34.576 | 483 | 285 | 12 | 47 | 507 | 121 | 594 | 7.02e-80 | 262 |
MS.gene026349.t1 | AT5G13960 | 34.388 | 474 | 275 | 11 | 55 | 507 | 2 | 460 | 1.58e-79 | 257 |
MS.gene026349.t1 | AT2G24740 | 34.914 | 464 | 271 | 14 | 52 | 508 | 285 | 724 | 1.08e-66 | 229 |
MS.gene026349.t1 | AT5G47150 | 37.387 | 222 | 129 | 5 | 10 | 229 | 111 | 324 | 3.36e-29 | 118 |
MS.gene026349.t1 | AT5G47160 | 35.349 | 215 | 127 | 6 | 14 | 225 | 202 | 407 | 1.66e-25 | 109 |
MS.gene026349.t1 | AT5G47160 | 35.349 | 215 | 127 | 6 | 14 | 225 | 202 | 407 | 1.66e-25 | 109 |
MS.gene026349.t1 | AT5G47160 | 35.349 | 215 | 127 | 6 | 14 | 225 | 202 | 407 | 1.66e-25 | 109 |
MS.gene026349.t1 | AT2G05900 | 36.471 | 170 | 104 | 3 | 117 | 286 | 26 | 191 | 2.31e-21 | 95.1 |
MS.gene026349.t1 | AT2G23740 | 33.511 | 188 | 105 | 5 | 325 | 507 | 1184 | 1356 | 8.72e-19 | 90.9 |
MS.gene026349.t1 | AT2G23740 | 33.511 | 188 | 105 | 5 | 325 | 507 | 1184 | 1356 | 8.72e-19 | 90.9 |
MS.gene026349.t1 | AT2G23740 | 33.511 | 188 | 105 | 5 | 325 | 507 | 1184 | 1356 | 8.72e-19 | 90.9 |
MS.gene026349.t1 | AT2G23740 | 33.511 | 188 | 105 | 5 | 325 | 507 | 1177 | 1349 | 9.51e-19 | 90.9 |
MS.gene026349.t1 | AT3G03750 | 30.288 | 208 | 119 | 6 | 301 | 507 | 141 | 323 | 1.33e-16 | 81.6 |
MS.gene026349.t1 | AT1G04050 | 26.282 | 312 | 148 | 10 | 258 | 509 | 409 | 698 | 5.46e-16 | 81.6 |
MS.gene026349.t1 | AT1G04050 | 26.282 | 312 | 148 | 10 | 258 | 509 | 409 | 698 | 5.46e-16 | 81.6 |
MS.gene026349.t1 | AT1G04050 | 26.282 | 312 | 148 | 10 | 258 | 509 | 305 | 594 | 6.26e-16 | 81.3 |
MS.gene026349.t1 | AT1G57820 | 32.484 | 157 | 92 | 4 | 80 | 229 | 277 | 426 | 5.56e-15 | 78.2 |
MS.gene026349.t1 | AT1G57820 | 32.484 | 157 | 92 | 4 | 80 | 229 | 277 | 426 | 5.56e-15 | 78.2 |
MS.gene026349.t1 | AT2G23740 | 35.616 | 146 | 74 | 5 | 325 | 465 | 1184 | 1314 | 4.31e-14 | 75.9 |
MS.gene026349.t1 | AT2G23740 | 35.616 | 146 | 74 | 5 | 325 | 465 | 1184 | 1314 | 4.31e-14 | 75.9 |
MS.gene026349.t1 | AT1G57820 | 31.818 | 154 | 94 | 4 | 80 | 229 | 277 | 423 | 6.74e-14 | 74.7 |
Find 134 sgRNAs with CRISPR-Local
Find 159 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCCCATTCCGTCCACCTATT+TGG | 0.145551 | 1.4:-19932781 | None:intergenic |
GTTGGAAGTGTTTAGATCTT+TGG | 0.227926 | 1.4:+19932618 | MS.gene026349:CDS |
CTATGATTCGGTTCGTGTTT+TGG | 0.241861 | 1.4:+19931613 | MS.gene026349:CDS |
AGAAGCCCGCTTTGACTATA+AGG | 0.293128 | 1.4:-19932499 | None:intergenic |
ACAAATTGAACCATCAGATT+TGG | 0.317584 | 1.4:-19932928 | None:intergenic |
AGAGATTTCAGCCTTGATTA+TGG | 0.322787 | 1.4:+19933021 | MS.gene026349:CDS |
AGGATTGTTGGCGCGATTCC+CGG | 0.341645 | 1.4:+19931740 | MS.gene026349:CDS |
CCATTTGAACTCATACTTCC+AGG | 0.343923 | 1.4:-19931851 | None:intergenic |
TCAAGCTAAGATGGGTAGTT+TGG | 0.350493 | 1.4:+19932207 | MS.gene026349:CDS |
TCCAAATAGGTGGACGGAAT+GGG | 0.353796 | 1.4:+19932780 | MS.gene026349:CDS |
TTGTGTGTGGTTGGTTTACA+TGG | 0.355893 | 1.4:+19931800 | MS.gene026349:CDS |
GGATGGAGCGTGTTGGTATA+AGG | 0.360343 | 1.4:+19932308 | MS.gene026349:CDS |
GTGTTTAGATCTTTGGAAAC+TGG | 0.365217 | 1.4:+19932625 | MS.gene026349:CDS |
ATGGAGAGGAGTATGCATTA+TGG | 0.365705 | 1.4:+19932022 | MS.gene026349:CDS |
TAGATCTTTGGAAACTGGTT+GGG | 0.370326 | 1.4:+19932630 | MS.gene026349:CDS |
TGCATTTGTTTCATGAGAAA+TGG | 0.371968 | 1.4:+19932466 | MS.gene026349:CDS |
CTTGTTCGAATGACGGATCT+AGG | 0.373790 | 1.4:+19931539 | MS.gene026349:CDS |
GTAAATGTGTGGGCAGTTGC+AGG | 0.381411 | 1.4:+19932437 | MS.gene026349:CDS |
GATGTTGGTAAAAGTGGTTT+TGG | 0.382231 | 1.4:+19932151 | MS.gene026349:CDS |
TCCATCCCGTTGGAAATATC+AGG | 0.385210 | 1.4:-19932292 | None:intergenic |
GAAGGTACTTCTTCAACTTC+AGG | 0.391726 | 1.4:+19932079 | MS.gene026349:CDS |
CATTTATATGCGAGTACAGC+GGG | 0.395589 | 1.4:+19932686 | MS.gene026349:CDS |
TAAATGTGCCAGCTTGAATA+AGG | 0.408878 | 1.4:-19932669 | None:intergenic |
TGGAGAGGAGTATGCATTAT+GGG | 0.415278 | 1.4:+19932023 | MS.gene026349:CDS |
GCTACTAGTGTGATTGTGTC+TGG | 0.438326 | 1.4:+19931884 | MS.gene026349:CDS |
GCTGGGATCGATTATTTGCC+TGG | 0.440591 | 1.4:+19931833 | MS.gene026349:CDS |
GGTAAGGTTTATGTTTATGA+TGG | 0.443436 | 1.4:+19932100 | MS.gene026349:CDS |
CACAACAAGGGCTTAATCAT+AGG | 0.446724 | 1.4:+19932596 | MS.gene026349:CDS |
GTAGCTGTCCGCCTCATTGT+CGG | 0.447353 | 1.4:+19932563 | MS.gene026349:CDS |
CACATCACCAATACATATCC+CGG | 0.453791 | 1.4:-19931759 | None:intergenic |
AAATTCAAAGGAAGAATTGA+TGG | 0.457852 | 1.4:-19932847 | None:intergenic |
GACTAGGATGGTCTATGATT+CGG | 0.457902 | 1.4:+19931601 | MS.gene026349:CDS |
TGTATAAGATTGTTGAAAGC+TGG | 0.458955 | 1.4:+19932125 | MS.gene026349:CDS |
CCTGGAAGTATGAGTTCAAA+TGG | 0.460753 | 1.4:+19931851 | MS.gene026349:CDS |
GATTGTGTCTGGTGGATATG+AGG | 0.460947 | 1.4:+19931895 | MS.gene026349:CDS |
GATTGATGATCAAGCTAAGA+TGG | 0.462647 | 1.4:+19932198 | MS.gene026349:CDS |
AATCGCAATATGAGGATTGT+TGG | 0.469750 | 1.4:+19931728 | MS.gene026349:CDS |
ATACACATAGGTTTATAATC+AGG | 0.471074 | 1.4:-19932262 | None:intergenic |
GGATTGTTGGCGCGATTCCC+GGG | 0.474543 | 1.4:+19931741 | MS.gene026349:CDS |
TTCCAAATAGGTGGACGGAA+TGG | 0.475724 | 1.4:+19932779 | MS.gene026349:CDS |
CACCTATTTGGAAAACGATT+CGG | 0.477175 | 1.4:-19932769 | None:intergenic |
TACTTCTTCAACTTCAGGTA+AGG | 0.478043 | 1.4:+19932084 | MS.gene026349:CDS |
AGGTGATGTTATTATTCTCT+CGG | 0.481641 | 1.4:+19931931 | MS.gene026349:CDS |
GTTATTATTCTCTCGGGTCA+TGG | 0.481758 | 1.4:+19931938 | MS.gene026349:CDS |
AGGATGGAGTTGTGTGTGGT+TGG | 0.488005 | 1.4:+19931791 | MS.gene026349:CDS |
ATCGGAAAAGCGTCAAATGC+GGG | 0.499046 | 1.4:+19931565 | MS.gene026349:CDS |
AATGACGGATCTAGGGTTAT+CGG | 0.500590 | 1.4:+19931547 | MS.gene026349:CDS |
TGTGGCTGAATCGCAATATG+AGG | 0.502406 | 1.4:+19931720 | MS.gene026349:CDS |
AGATCTTTGGAAACTGGTTG+GGG | 0.504345 | 1.4:+19932631 | MS.gene026349:CDS |
GGTGATGTTATTATTCTCTC+GGG | 0.504399 | 1.4:+19931932 | MS.gene026349:CDS |
TGGTGTGATGTTGGTAAAAG+TGG | 0.509931 | 1.4:+19932145 | MS.gene026349:CDS |
TATCTCCTGATATTTCCAAC+GGG | 0.517150 | 1.4:+19932287 | MS.gene026349:CDS |
ATTGTGTCTGGTGGATATGA+GGG | 0.518375 | 1.4:+19931896 | MS.gene026349:CDS |
TCATTTGACCTTATTCAAGC+TGG | 0.519192 | 1.4:+19932661 | MS.gene026349:CDS |
TAAAACTATGCTGTTTGCGA+TGG | 0.519235 | 1.4:+19932981 | MS.gene026349:CDS |
CCCCTTGGATGAAAATCAAA+GGG | 0.520001 | 1.4:-19932400 | None:intergenic |
GCTTTCCTTATAGTCAAAGC+GGG | 0.522811 | 1.4:+19932494 | MS.gene026349:CDS |
CGGAACCGTGTTACACAACA+AGG | 0.524134 | 1.4:+19932583 | MS.gene026349:CDS |
TCTCTCGGGTCATGGTGGGC+AGG | 0.526040 | 1.4:+19931946 | MS.gene026349:CDS |
TGGAAACTGGTTGGGGAGTG+AGG | 0.530566 | 1.4:+19932638 | MS.gene026349:CDS |
TGAGGCGGACAGCTACAATC+AGG | 0.531632 | 1.4:-19932556 | None:intergenic |
ACAATCACACTAGTAGCAAT+CGG | 0.534911 | 1.4:-19931878 | None:intergenic |
GTTGAAAGCTGGTGTGATGT+TGG | 0.536898 | 1.4:+19932136 | MS.gene026349:CDS |
TCATCAGAAGCTAGAAGGAG+GGG | 0.538962 | 1.4:+19931991 | MS.gene026349:CDS |
TTAGATCTTTGGAAACTGGT+TGG | 0.541400 | 1.4:+19932629 | MS.gene026349:CDS |
GCGATTCCCGGGATATGTAT+TGG | 0.541933 | 1.4:+19931752 | MS.gene026349:CDS |
GAGTATGCATTATGGGATTG+AGG | 0.542821 | 1.4:+19932030 | MS.gene026349:CDS |
TTGTTCGAATGACGGATCTA+GGG | 0.543701 | 1.4:+19931540 | MS.gene026349:CDS |
TCCTGATATTTCCAACGGGA+TGG | 0.545378 | 1.4:+19932291 | MS.gene026349:CDS |
TTATTCTCTCGGGTCATGGT+GGG | 0.547783 | 1.4:+19931942 | MS.gene026349:CDS |
TCAAGGCTGAAATCTCTCAA+TGG | 0.553800 | 1.4:-19933015 | None:intergenic |
CAAAGCGGGCTTCTCTTGAA+AGG | 0.554951 | 1.4:+19932508 | MS.gene026349:CDS |
ACAAGGGCTTAATCATAGGT+TGG | 0.555207 | 1.4:+19932600 | MS.gene026349:CDS |
CATCATCTACACCATAATCA+AGG | 0.555559 | 1.4:-19933032 | None:intergenic |
AGAAGGAGGGGATCTTGCTA+TGG | 0.555793 | 1.4:+19932003 | MS.gene026349:CDS |
ATATCTCCTGATATTTCCAA+CGG | 0.556018 | 1.4:+19932286 | MS.gene026349:CDS |
GCTTCTCTTGAAAGGAAAGC+CGG | 0.556611 | 1.4:+19932516 | MS.gene026349:CDS |
TTGGCTATGGCTGAAGATGA+AGG | 0.558623 | 1.4:+19931632 | MS.gene026349:CDS |
AGATCCGTCATTCGAACAAG+TGG | 0.563268 | 1.4:-19931536 | None:intergenic |
CGATGAGGAGTCGAGGATTG+TGG | 0.563315 | 1.4:+19931702 | MS.gene026349:CDS |
CCAAATAGGTGGACGGAATG+GGG | 0.564405 | 1.4:+19932781 | MS.gene026349:CDS |
GGAAGAATTGATGGATACGA+AGG | 0.565248 | 1.4:-19932838 | None:intergenic |
GCATTATGGGATTGAGGTGA+GGG | 0.567512 | 1.4:+19932036 | MS.gene026349:CDS |
GAAATCTCTCAATGGAGGGA+TGG | 0.567762 | 1.4:-19933007 | None:intergenic |
TTACATGGTGAACCACAAGC+TGG | 0.570814 | 1.4:+19931815 | MS.gene026349:CDS |
CTCTGGACGTGTCTAGAATG+AGG | 0.571022 | 1.4:+19932872 | MS.gene026349:CDS |
TTCATCAGAAGCTAGAAGGA+GGG | 0.573844 | 1.4:+19931990 | MS.gene026349:CDS |
GTATAGGATGGAGTTGTGTG+TGG | 0.574388 | 1.4:+19931787 | MS.gene026349:CDS |
GGCTGAAATCTCTCAATGGA+GGG | 0.575518 | 1.4:-19933011 | None:intergenic |
TACATGGTGAACCACAAGCT+GGG | 0.577042 | 1.4:+19931816 | MS.gene026349:CDS |
GGGATGTTGTTCGAAGGACT+AGG | 0.579467 | 1.4:+19931585 | MS.gene026349:CDS |
ACTAGTGTGATTGTGTCTGG+TGG | 0.586852 | 1.4:+19931887 | MS.gene026349:CDS |
TGCATTATGGGATTGAGGTG+AGG | 0.587036 | 1.4:+19932035 | MS.gene026349:CDS |
ATGGTGGGCAGGATAAGAAT+CGG | 0.592281 | 1.4:+19931957 | MS.gene026349:CDS |
ATTATTCTCTCGGGTCATGG+TGG | 0.592834 | 1.4:+19931941 | MS.gene026349:CDS |
TAGCTCAACTCCAAATCTGA+TGG | 0.593289 | 1.4:+19932918 | MS.gene026349:CDS |
ATTGATGATCAAGCTAAGAT+GGG | 0.593619 | 1.4:+19932199 | MS.gene026349:CDS |
TAAGCCCTTGTTGTGTAACA+CGG | 0.598036 | 1.4:-19932588 | None:intergenic |
AGGCTGAAATCTCTCAATGG+AGG | 0.598790 | 1.4:-19933012 | None:intergenic |
GATCCCACTTGTTCGAATGA+CGG | 0.598813 | 1.4:+19931532 | MS.gene026349:CDS |
ACCAACACGCTCCATCCCGT+TGG | 0.599403 | 1.4:-19932302 | None:intergenic |
ACAGCGGGGTTGTTCTAACA+AGG | 0.600545 | 1.4:+19932701 | MS.gene026349:CDS |
ACATCACCAATACATATCCC+GGG | 0.600688 | 1.4:-19931758 | None:intergenic |
TTTCATCAGAAGCTAGAAGG+AGG | 0.601171 | 1.4:+19931989 | MS.gene026349:CDS |
GCAGAAATTATGACTATGAG+TGG | 0.602784 | 1.4:+19932730 | MS.gene026349:CDS |
ACGTCCAGAGCAAAATTCAA+AGG | 0.609054 | 1.4:-19932859 | None:intergenic |
TGTGTGGGCAGTTGCAGGGA+AGG | 0.614573 | 1.4:+19932442 | MS.gene026349:CDS |
TGAGGGTCATCCGCGCTGTG+AGG | 0.617530 | 1.4:+19932053 | MS.gene026349:CDS |
GAGGGGATCTTGCTATGGAG+AGG | 0.622960 | 1.4:+19932008 | MS.gene026349:CDS |
TCAGGAGATATAATACACAT+AGG | 0.624086 | 1.4:-19932274 | None:intergenic |
TGAGACAGGTTGTAAATGTG+TGG | 0.625021 | 1.4:+19932426 | MS.gene026349:CDS |
TATCGGAAAAGCGTCAAATG+CGG | 0.625063 | 1.4:+19931564 | MS.gene026349:CDS |
ATCCGCGCTGTGAGGTACGA+AGG | 0.625946 | 1.4:+19932061 | MS.gene026349:CDS |
GGAAGATACTCAAAATACAT+CGG | 0.630650 | 1.4:-19932361 | None:intergenic |
AGCTTTCCTTATAGTCAAAG+CGG | 0.631436 | 1.4:+19932493 | MS.gene026349:CDS |
AAATAATCGATCCCAGCTTG+TGG | 0.632977 | 1.4:-19931827 | None:intergenic |
TATGAGGGTGATGTTGATGA+AGG | 0.637266 | 1.4:+19931911 | MS.gene026349:CDS |
TAAATGTGTGGGCAGTTGCA+GGG | 0.639917 | 1.4:+19932438 | MS.gene026349:CDS |
AAATGCGGGATGTTGTTCGA+AGG | 0.647284 | 1.4:+19931579 | MS.gene026349:CDS |
GAGACAGGTTGTAAATGTGT+GGG | 0.652888 | 1.4:+19932427 | MS.gene026349:CDS |
TGTTGTTCGAAGGACTAGGA+TGG | 0.654135 | 1.4:+19931589 | MS.gene026349:CDS |
TGAAAGCTTCTGCTACGATG+AGG | 0.658793 | 1.4:+19931687 | MS.gene026349:CDS |
TCCAACGGGATGGAGCGTGT+TGG | 0.665494 | 1.4:+19932301 | MS.gene026349:CDS |
GATCCGTCATTCGAACAAGT+GGG | 0.669479 | 1.4:-19931535 | None:intergenic |
TCTGCTACGATGAGGAGTCG+AGG | 0.674570 | 1.4:+19931695 | MS.gene026349:CDS |
ACATTTATATGCGAGTACAG+CGG | 0.676169 | 1.4:+19932685 | MS.gene026349:CDS |
ACACGGTTCCGACAATGAGG+CGG | 0.681770 | 1.4:-19932571 | None:intergenic |
GTGGGCAGGATAAGAATCGG+AGG | 0.693208 | 1.4:+19931960 | MS.gene026349:CDS |
CAGCGGGGTTGTTCTAACAA+GGG | 0.700564 | 1.4:+19932702 | MS.gene026349:CDS |
GTAACACGGTTCCGACAATG+AGG | 0.703986 | 1.4:-19932574 | None:intergenic |
CGTGTCTAGAATGAGGAATG+TGG | 0.710491 | 1.4:+19932879 | MS.gene026349:CDS |
ATTTATATGCGAGTACAGCG+GGG | 0.724918 | 1.4:+19932687 | MS.gene026349:CDS |
TACCTTCGTACCTCACAGCG+CGG | 0.749117 | 1.4:-19932063 | None:intergenic |
GGAACCGTGTTACACAACAA+GGG | 0.763258 | 1.4:+19932584 | MS.gene026349:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AAATTCAAAGGAAGAATTGA+TGG | - | chr1.4:19932850-19932869 | None:intergenic | 25.0% |
! | ATACACATAGGTTTATAATC+AGG | - | chr1.4:19932265-19932284 | None:intergenic | 25.0% |
!!! | TTTTTAAGTTTATGTTGTCG+AGG | + | chr1.4:19932176-19932195 | MS.gene026349:CDS | 25.0% |
ACAAATTGAACCATCAGATT+TGG | - | chr1.4:19932931-19932950 | None:intergenic | 30.0% | |
AGGTGATGTTATTATTCTCT+CGG | + | chr1.4:19931931-19931950 | MS.gene026349:CDS | 30.0% | |
ATATCTCCTGATATTTCCAA+CGG | + | chr1.4:19932286-19932305 | MS.gene026349:CDS | 30.0% | |
GGAAGATACTCAAAATACAT+CGG | - | chr1.4:19932364-19932383 | None:intergenic | 30.0% | |
GGTAAGGTTTATGTTTATGA+TGG | + | chr1.4:19932100-19932119 | MS.gene026349:CDS | 30.0% | |
TCAGGAGATATAATACACAT+AGG | - | chr1.4:19932277-19932296 | None:intergenic | 30.0% | |
TGCATTTGTTTCATGAGAAA+TGG | + | chr1.4:19932466-19932485 | MS.gene026349:CDS | 30.0% | |
TGTATAAGATTGTTGAAAGC+TGG | + | chr1.4:19932125-19932144 | MS.gene026349:CDS | 30.0% | |
! | ATTGATGATCAAGCTAAGAT+GGG | + | chr1.4:19932199-19932218 | MS.gene026349:CDS | 30.0% |
!! | GTATTTTGAGTATCTTCCTA+GGG | + | chr1.4:19932366-19932385 | MS.gene026349:CDS | 30.0% |
!! | TGATGTGTTTTTGTATAGGA+TGG | + | chr1.4:19931775-19931794 | MS.gene026349:CDS | 30.0% |
!! | TGTATTTTGAGTATCTTCCT+AGG | + | chr1.4:19932365-19932384 | MS.gene026349:CDS | 30.0% |
!!! | TTGGTGATGTGTTTTTGTAT+AGG | + | chr1.4:19931771-19931790 | MS.gene026349:CDS | 30.0% |
AATCGCAATATGAGGATTGT+TGG | + | chr1.4:19931728-19931747 | MS.gene026349:CDS | 35.0% | |
ACAATCACACTAGTAGCAAT+CGG | - | chr1.4:19931881-19931900 | None:intergenic | 35.0% | |
ACATTTATATGCGAGTACAG+CGG | + | chr1.4:19932685-19932704 | MS.gene026349:CDS | 35.0% | |
AGAGATTTCAGCCTTGATTA+TGG | + | chr1.4:19933021-19933040 | MS.gene026349:CDS | 35.0% | |
AGCTTTCCTTATAGTCAAAG+CGG | + | chr1.4:19932493-19932512 | MS.gene026349:CDS | 35.0% | |
CACCTATTTGGAAAACGATT+CGG | - | chr1.4:19932772-19932791 | None:intergenic | 35.0% | |
CATCATCTACACCATAATCA+AGG | - | chr1.4:19933035-19933054 | None:intergenic | 35.0% | |
GCAGAAATTATGACTATGAG+TGG | + | chr1.4:19932730-19932749 | MS.gene026349:CDS | 35.0% | |
GGTGATGTTATTATTCTCTC+GGG | + | chr1.4:19931932-19931951 | MS.gene026349:CDS | 35.0% | |
TAAATGTGCCAGCTTGAATA+AGG | - | chr1.4:19932672-19932691 | None:intergenic | 35.0% | |
TACTTCTTCAACTTCAGGTA+AGG | + | chr1.4:19932084-19932103 | MS.gene026349:CDS | 35.0% | |
TATCTCCTGATATTTCCAAC+GGG | + | chr1.4:19932287-19932306 | MS.gene026349:CDS | 35.0% | |
TCATTTGACCTTATTCAAGC+TGG | + | chr1.4:19932661-19932680 | MS.gene026349:CDS | 35.0% | |
! | ATCCGAATCGTTTTCCAAAT+AGG | + | chr1.4:19932767-19932786 | MS.gene026349:CDS | 35.0% |
! | GATTGATGATCAAGCTAAGA+TGG | + | chr1.4:19932198-19932217 | MS.gene026349:CDS | 35.0% |
! | GTGTTTAGATCTTTGGAAAC+TGG | + | chr1.4:19932625-19932644 | MS.gene026349:CDS | 35.0% |
! | GTTTTTCATCAGAAGCTAGA+AGG | + | chr1.4:19931986-19932005 | MS.gene026349:CDS | 35.0% |
! | TAAAACTATGCTGTTTGCGA+TGG | + | chr1.4:19932981-19933000 | MS.gene026349:CDS | 35.0% |
! | TAGATCTTTGGAAACTGGTT+GGG | + | chr1.4:19932630-19932649 | MS.gene026349:CDS | 35.0% |
! | TCTTCCTTTGAATTTTGCTC+TGG | + | chr1.4:19932855-19932874 | MS.gene026349:CDS | 35.0% |
! | TTAGATCTTTGGAAACTGGT+TGG | + | chr1.4:19932629-19932648 | MS.gene026349:CDS | 35.0% |
!! | GATGTTGGTAAAAGTGGTTT+TGG | + | chr1.4:19932151-19932170 | MS.gene026349:CDS | 35.0% |
!! | GTTGGAAGTGTTTAGATCTT+TGG | + | chr1.4:19932618-19932637 | MS.gene026349:CDS | 35.0% |
!! | TCCCTTTGATTTTCATCCAA+GGG | + | chr1.4:19932399-19932418 | MS.gene026349:CDS | 35.0% |
!! | TCGCAAACAGCATAGTTTTA+AGG | - | chr1.4:19932981-19933000 | None:intergenic | 35.0% |
!! | TTCCCTTTGATTTTCATCCA+AGG | + | chr1.4:19932398-19932417 | MS.gene026349:CDS | 35.0% |
!!! | GATGGGTAGTTTGGTTTTAA+AGG | + | chr1.4:19932216-19932235 | MS.gene026349:CDS | 35.0% |
AAATAATCGATCCCAGCTTG+TGG | - | chr1.4:19931830-19931849 | None:intergenic | 40.0% | |
AAGGGAAAAAATGTAGCCCT+AGG | - | chr1.4:19932385-19932404 | None:intergenic | 40.0% | |
ACAAGGGCTTAATCATAGGT+TGG | + | chr1.4:19932600-19932619 | MS.gene026349:CDS | 40.0% | |
ACATCACCAATACATATCCC+GGG | - | chr1.4:19931761-19931780 | None:intergenic | 40.0% | |
ACGTCCAGAGCAAAATTCAA+AGG | - | chr1.4:19932862-19932881 | None:intergenic | 40.0% | |
ATTTATATGCGAGTACAGCG+GGG | + | chr1.4:19932687-19932706 | MS.gene026349:CDS | 40.0% | |
CACAACAAGGGCTTAATCAT+AGG | + | chr1.4:19932596-19932615 | MS.gene026349:CDS | 40.0% | |
CACATCACCAATACATATCC+CGG | - | chr1.4:19931762-19931781 | None:intergenic | 40.0% | |
CATTTATATGCGAGTACAGC+GGG | + | chr1.4:19932686-19932705 | MS.gene026349:CDS | 40.0% | |
CCATTTGAACTCATACTTCC+AGG | - | chr1.4:19931854-19931873 | None:intergenic | 40.0% | |
CCCCTTGGATGAAAATCAAA+GGG | - | chr1.4:19932403-19932422 | None:intergenic | 40.0% | |
GACTAGGATGGTCTATGATT+CGG | + | chr1.4:19931601-19931620 | MS.gene026349:CDS | 40.0% | |
GAGACAGGTTGTAAATGTGT+GGG | + | chr1.4:19932427-19932446 | MS.gene026349:CDS | 40.0% | |
GAGTATGCATTATGGGATTG+AGG | + | chr1.4:19932030-19932049 | MS.gene026349:CDS | 40.0% | |
GCTTTCCTTATAGTCAAAGC+GGG | + | chr1.4:19932494-19932513 | MS.gene026349:CDS | 40.0% | |
GGACCACATTCAAAAATGAC+CGG | - | chr1.4:19932538-19932557 | None:intergenic | 40.0% | |
GTTATTATTCTCTCGGGTCA+TGG | + | chr1.4:19931938-19931957 | MS.gene026349:CDS | 40.0% | |
TAGCTCAACTCCAAATCTGA+TGG | + | chr1.4:19932918-19932937 | MS.gene026349:CDS | 40.0% | |
TCAAGCTAAGATGGGTAGTT+TGG | + | chr1.4:19932207-19932226 | MS.gene026349:CDS | 40.0% | |
TCAAGGCTGAAATCTCTCAA+TGG | - | chr1.4:19933018-19933037 | None:intergenic | 40.0% | |
TGAGACAGGTTGTAAATGTG+TGG | + | chr1.4:19932426-19932445 | MS.gene026349:CDS | 40.0% | |
TTCATCAGAAGCTAGAAGGA+GGG | + | chr1.4:19931990-19932009 | MS.gene026349:CDS | 40.0% | |
TTTCATCAGAAGCTAGAAGG+AGG | + | chr1.4:19931989-19932008 | MS.gene026349:CDS | 40.0% | |
! | AGATCTTTGGAAACTGGTTG+GGG | + | chr1.4:19932631-19932650 | MS.gene026349:CDS | 40.0% |
! | ATGGAGAGGAGTATGCATTA+TGG | + | chr1.4:19932022-19932041 | MS.gene026349:CDS | 40.0% |
! | ATTGTGTCTGGTGGATATGA+GGG | + | chr1.4:19931896-19931915 | MS.gene026349:CDS | 40.0% |
! | CCTGGAAGTATGAGTTCAAA+TGG | + | chr1.4:19931851-19931870 | MS.gene026349:CDS | 40.0% |
! | CGAATCGTTTTCCAAATAGG+TGG | + | chr1.4:19932770-19932789 | MS.gene026349:CDS | 40.0% |
! | GGAAGAATTGATGGATACGA+AGG | - | chr1.4:19932841-19932860 | None:intergenic | 40.0% |
! | TAAGCCCTTGTTGTGTAACA+CGG | - | chr1.4:19932591-19932610 | None:intergenic | 40.0% |
! | TATGAGGGTGATGTTGATGA+AGG | + | chr1.4:19931911-19931930 | MS.gene026349:CDS | 40.0% |
! | TCGTTTTCCAAATAGGTGGA+CGG | + | chr1.4:19932774-19932793 | MS.gene026349:CDS | 40.0% |
! | TGGAGAGGAGTATGCATTAT+GGG | + | chr1.4:19932023-19932042 | MS.gene026349:CDS | 40.0% |
! | TGGTGTGATGTTGGTAAAAG+TGG | + | chr1.4:19932145-19932164 | MS.gene026349:CDS | 40.0% |
!! | AATGACGGATCTAGGGTTAT+CGG | + | chr1.4:19931547-19931566 | MS.gene026349:CDS | 40.0% |
!! | CCCTTTGATTTTCATCCAAG+GGG | + | chr1.4:19932400-19932419 | MS.gene026349:CDS | 40.0% |
!! | CCTTTGATTTTCATCCAAGG+GGG | + | chr1.4:19932401-19932420 | MS.gene026349:CDS | 40.0% |
!! | GAAGGTACTTCTTCAACTTC+AGG | + | chr1.4:19932079-19932098 | MS.gene026349:CDS | 40.0% |
!! | TATCGGAAAAGCGTCAAATG+CGG | + | chr1.4:19931564-19931583 | MS.gene026349:CDS | 40.0% |
!! | TTGTGTGTGGTTGGTTTACA+TGG | + | chr1.4:19931800-19931819 | MS.gene026349:CDS | 40.0% |
!! | TTGTTCGAATGACGGATCTA+GGG | + | chr1.4:19931540-19931559 | MS.gene026349:CDS | 40.0% |
!!! | AAGCCGGTCATTTTTGAATG+TGG | + | chr1.4:19932532-19932551 | MS.gene026349:CDS | 40.0% |
!!! | CTATGATTCGGTTCGTGTTT+TGG | + | chr1.4:19931613-19931632 | MS.gene026349:CDS | 40.0% |
!!! | GGGTAGTTTGGTTTTAAAGG+AGG | + | chr1.4:19932219-19932238 | MS.gene026349:CDS | 40.0% |
!!! | TAAAGGAGGCTTTTTTGCGT+AGG | + | chr1.4:19932233-19932252 | MS.gene026349:CDS | 40.0% |
AAATGCGGGATGTTGTTCGA+AGG | + | chr1.4:19931579-19931598 | MS.gene026349:CDS | 45.0% | |
ACTAGTGTGATTGTGTCTGG+TGG | + | chr1.4:19931887-19931906 | MS.gene026349:CDS | 45.0% | |
AGAAGCCCGCTTTGACTATA+AGG | - | chr1.4:19932502-19932521 | None:intergenic | 45.0% | |
AGATCCGTCATTCGAACAAG+TGG | - | chr1.4:19931539-19931558 | None:intergenic | 45.0% | |
AGGCTGAAATCTCTCAATGG+AGG | - | chr1.4:19933015-19933034 | None:intergenic | 45.0% | |
ATTATTCTCTCGGGTCATGG+TGG | + | chr1.4:19931941-19931960 | MS.gene026349:CDS | 45.0% | |
CCCCCTTGGATGAAAATCAA+AGG | - | chr1.4:19932404-19932423 | None:intergenic | 45.0% | |
GAAATCTCTCAATGGAGGGA+TGG | - | chr1.4:19933010-19933029 | None:intergenic | 45.0% | |
GATCCCACTTGTTCGAATGA+CGG | + | chr1.4:19931532-19931551 | MS.gene026349:CDS | 45.0% | |
GATCCGTCATTCGAACAAGT+GGG | - | chr1.4:19931538-19931557 | None:intergenic | 45.0% | |
GCATTATGGGATTGAGGTGA+GGG | + | chr1.4:19932036-19932055 | MS.gene026349:CDS | 45.0% | |
GCTACTAGTGTGATTGTGTC+TGG | + | chr1.4:19931884-19931903 | MS.gene026349:CDS | 45.0% | |
GCTTCTCTTGAAAGGAAAGC+CGG | + | chr1.4:19932516-19932535 | MS.gene026349:CDS | 45.0% | |
GGAACCGTGTTACACAACAA+GGG | + | chr1.4:19932584-19932603 | MS.gene026349:CDS | 45.0% | |
GGCTGAAATCTCTCAATGGA+GGG | - | chr1.4:19933014-19933033 | None:intergenic | 45.0% | |
GTATAGGATGGAGTTGTGTG+TGG | + | chr1.4:19931787-19931806 | MS.gene026349:CDS | 45.0% | |
GTTGAAAGCTGGTGTGATGT+TGG | + | chr1.4:19932136-19932155 | MS.gene026349:CDS | 45.0% | |
TAAATGTGTGGGCAGTTGCA+GGG | + | chr1.4:19932438-19932457 | MS.gene026349:CDS | 45.0% | |
TACATGGTGAACCACAAGCT+GGG | + | chr1.4:19931816-19931835 | MS.gene026349:CDS | 45.0% | |
TCATCAGAAGCTAGAAGGAG+GGG | + | chr1.4:19931991-19932010 | MS.gene026349:CDS | 45.0% | |
TCCAAATAGGTGGACGGAAT+GGG | + | chr1.4:19932780-19932799 | MS.gene026349:CDS | 45.0% | |
TCCATCCCGTTGGAAATATC+AGG | - | chr1.4:19932295-19932314 | None:intergenic | 45.0% | |
TCCTGATATTTCCAACGGGA+TGG | + | chr1.4:19932291-19932310 | MS.gene026349:CDS | 45.0% | |
TGAAAGCTTCTGCTACGATG+AGG | + | chr1.4:19931687-19931706 | MS.gene026349:CDS | 45.0% | |
TGCATTATGGGATTGAGGTG+AGG | + | chr1.4:19932035-19932054 | MS.gene026349:CDS | 45.0% | |
TGTGGCTGAATCGCAATATG+AGG | + | chr1.4:19931720-19931739 | MS.gene026349:CDS | 45.0% | |
TGTTGTTCGAAGGACTAGGA+TGG | + | chr1.4:19931589-19931608 | MS.gene026349:CDS | 45.0% | |
TTACATGGTGAACCACAAGC+TGG | + | chr1.4:19931815-19931834 | MS.gene026349:CDS | 45.0% | |
TTATTCTCTCGGGTCATGGT+GGG | + | chr1.4:19931942-19931961 | MS.gene026349:CDS | 45.0% | |
TTCCAAATAGGTGGACGGAA+TGG | + | chr1.4:19932779-19932798 | MS.gene026349:CDS | 45.0% | |
TTGGCTATGGCTGAAGATGA+AGG | + | chr1.4:19931632-19931651 | MS.gene026349:CDS | 45.0% | |
! | CGTGTCTAGAATGAGGAATG+TGG | + | chr1.4:19932879-19932898 | MS.gene026349:CDS | 45.0% |
! | GATTGTGTCTGGTGGATATG+AGG | + | chr1.4:19931895-19931914 | MS.gene026349:CDS | 45.0% |
!! | ATCGGAAAAGCGTCAAATGC+GGG | + | chr1.4:19931565-19931584 | MS.gene026349:CDS | 45.0% |
!! | ATGGTGGGCAGGATAAGAAT+CGG | + | chr1.4:19931957-19931976 | MS.gene026349:CDS | 45.0% |
!! | CTTGTTCGAATGACGGATCT+AGG | + | chr1.4:19931539-19931558 | MS.gene026349:CDS | 45.0% |
!!! | TTCGGTTCGTGTTTTGGCTA+TGG | + | chr1.4:19931619-19931638 | MS.gene026349:CDS | 45.0% |
ACAGCGGGGTTGTTCTAACA+AGG | + | chr1.4:19932701-19932720 | MS.gene026349:CDS | 50.0% | |
AGAAGGAGGGGATCTTGCTA+TGG | + | chr1.4:19932003-19932022 | MS.gene026349:CDS | 50.0% | |
AGGATGGAGTTGTGTGTGGT+TGG | + | chr1.4:19931791-19931810 | MS.gene026349:CDS | 50.0% | |
CAGCGGGGTTGTTCTAACAA+GGG | + | chr1.4:19932702-19932721 | MS.gene026349:CDS | 50.0% | |
CCAAATAGGTGGACGGAATG+GGG | + | chr1.4:19932781-19932800 | MS.gene026349:CDS | 50.0% | |
CGGAACCGTGTTACACAACA+AGG | + | chr1.4:19932583-19932602 | MS.gene026349:CDS | 50.0% | |
GCGATTCCCGGGATATGTAT+TGG | + | chr1.4:19931752-19931771 | MS.gene026349:CDS | 50.0% | |
GCTGGGATCGATTATTTGCC+TGG | + | chr1.4:19931833-19931852 | MS.gene026349:CDS | 50.0% | |
GGGATGTTGTTCGAAGGACT+AGG | + | chr1.4:19931585-19931604 | MS.gene026349:CDS | 50.0% | |
GTAAATGTGTGGGCAGTTGC+AGG | + | chr1.4:19932437-19932456 | MS.gene026349:CDS | 50.0% | |
GTAACACGGTTCCGACAATG+AGG | - | chr1.4:19932577-19932596 | None:intergenic | 50.0% | |
! | CAAAGCGGGCTTCTCTTGAA+AGG | + | chr1.4:19932508-19932527 | MS.gene026349:CDS | 50.0% |
! | CTCTGGACGTGTCTAGAATG+AGG | + | chr1.4:19932872-19932891 | MS.gene026349:CDS | 50.0% |
! | GGATGGAGCGTGTTGGTATA+AGG | + | chr1.4:19932308-19932327 | MS.gene026349:CDS | 50.0% |
ACACGGTTCCGACAATGAGG+CGG | - | chr1.4:19932574-19932593 | None:intergenic | 55.0% | |
AGGATTGTTGGCGCGATTCC+CGG | + | chr1.4:19931740-19931759 | MS.gene026349:CDS | 55.0% | |
CAACCTGTCTCATTCCCCCT+TGG | - | chr1.4:19932418-19932437 | None:intergenic | 55.0% | |
CATCCAAGGGGGAATGAGAC+AGG | + | chr1.4:19932412-19932431 | MS.gene026349:CDS | 55.0% | |
CCCCATTCCGTCCACCTATT+TGG | - | chr1.4:19932784-19932803 | None:intergenic | 55.0% | |
CGATGAGGAGTCGAGGATTG+TGG | + | chr1.4:19931702-19931721 | MS.gene026349:CDS | 55.0% | |
GTAGCTGTCCGCCTCATTGT+CGG | + | chr1.4:19932563-19932582 | MS.gene026349:CDS | 55.0% | |
GTGGGCAGGATAAGAATCGG+AGG | + | chr1.4:19931960-19931979 | MS.gene026349:CDS | 55.0% | |
TACCTTCGTACCTCACAGCG+CGG | - | chr1.4:19932066-19932085 | None:intergenic | 55.0% | |
TCTGCTACGATGAGGAGTCG+AGG | + | chr1.4:19931695-19931714 | MS.gene026349:CDS | 55.0% | |
TGAGGCGGACAGCTACAATC+AGG | - | chr1.4:19932559-19932578 | None:intergenic | 55.0% | |
TGGAAACTGGTTGGGGAGTG+AGG | + | chr1.4:19932638-19932657 | MS.gene026349:CDS | 55.0% | |
! | GAGGGGATCTTGCTATGGAG+AGG | + | chr1.4:19932008-19932027 | MS.gene026349:CDS | 55.0% |
ACCAACACGCTCCATCCCGT+TGG | - | chr1.4:19932305-19932324 | None:intergenic | 60.0% | |
ATCCGCGCTGTGAGGTACGA+AGG | + | chr1.4:19932061-19932080 | MS.gene026349:CDS | 60.0% | |
GGATTGTTGGCGCGATTCCC+GGG | + | chr1.4:19931741-19931760 | MS.gene026349:CDS | 60.0% | |
TCCAACGGGATGGAGCGTGT+TGG | + | chr1.4:19932301-19932320 | MS.gene026349:CDS | 60.0% | |
TGTGTGGGCAGTTGCAGGGA+AGG | + | chr1.4:19932442-19932461 | MS.gene026349:CDS | 60.0% | |
TGAGGGTCATCCGCGCTGTG+AGG | + | chr1.4:19932053-19932072 | MS.gene026349:CDS | 65.0% | |
!! | TCTCTCGGGTCATGGTGGGC+AGG | + | chr1.4:19931946-19931965 | MS.gene026349:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 19931524 | 19933089 | 19931524 | ID=MS.gene026349 |
chr1.4 | mRNA | 19931524 | 19933089 | 19931524 | ID=MS.gene026349.t1;Parent=MS.gene026349 |
chr1.4 | exon | 19931524 | 19933089 | 19931524 | ID=MS.gene026349.t1.exon1;Parent=MS.gene026349.t1 |
chr1.4 | CDS | 19931524 | 19933089 | 19931524 | ID=cds.MS.gene026349.t1;Parent=MS.gene026349.t1 |
Gene Sequence |
Protein sequence |