Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026383.t1 | XP_013466739.1 | 88.3 | 308 | 34 | 1 | 1 | 308 | 1 | 306 | 4.90E-135 | 490.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026383.t1 | A0A072VRN1 | 88.3 | 308 | 34 | 1 | 1 | 308 | 1 | 306 | 3.5e-135 | 490.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene026383.t1 | TF | bZIP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026383.t1 | MTR_1g034500 | 95.469 | 309 | 12 | 1 | 1 | 309 | 1 | 307 | 0.0 | 610 |
| MS.gene026383.t1 | MTR_2g045670 | 64.309 | 311 | 60 | 8 | 1 | 309 | 20 | 281 | 2.82e-123 | 354 |
| MS.gene026383.t1 | MTR_2g045700 | 64.309 | 311 | 69 | 9 | 1 | 309 | 1 | 271 | 5.98e-119 | 343 |
| MS.gene026383.t1 | MTR_2g045630 | 65.726 | 248 | 58 | 7 | 76 | 308 | 42 | 277 | 3.50e-96 | 285 |
| MS.gene026383.t1 | MTR_8g077950 | 28.701 | 331 | 180 | 13 | 19 | 303 | 19 | 339 | 2.21e-25 | 103 |
| MS.gene026383.t1 | MTR_8g077950 | 47.674 | 86 | 43 | 1 | 220 | 303 | 252 | 337 | 9.17e-20 | 88.6 |
| MS.gene026383.t1 | MTR_8g077950 | 47.674 | 86 | 43 | 1 | 220 | 303 | 194 | 279 | 1.13e-19 | 87.4 |
| MS.gene026383.t1 | MTR_5g028850 | 33.333 | 99 | 62 | 1 | 198 | 296 | 286 | 380 | 2.48e-11 | 64.3 |
| MS.gene026383.t1 | MTR_5g028850 | 33.333 | 99 | 62 | 1 | 198 | 296 | 284 | 378 | 2.91e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026383.t1 | AT4G36730 | 25.329 | 304 | 202 | 6 | 12 | 303 | 9 | 299 | 9.62e-25 | 102 |
| MS.gene026383.t1 | AT4G36730 | 25.163 | 306 | 202 | 7 | 12 | 303 | 9 | 301 | 7.22e-23 | 96.7 |
| MS.gene026383.t1 | AT2G35530 | 39.706 | 68 | 41 | 0 | 224 | 291 | 305 | 372 | 5.12e-12 | 66.6 |
Find 59 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTGGTCTGGCTCAGAATT+TGG | 0.096203 | 1.1:+19244502 | MS.gene026383:CDS |
| AACAACTATGTGGGGTTTAT+TGG | 0.126290 | 1.1:-19243516 | None:intergenic |
| GAAATGGTACACAGAAATTT+TGG | 0.193208 | 1.1:+19243816 | MS.gene026383:CDS |
| GATTTATGCTTCTTAGTTAA+AGG | 0.201185 | 1.1:-19244295 | None:intergenic |
| TCTGGTCTGGCTCAGAATTT+GGG | 0.206123 | 1.1:+19244503 | MS.gene026383:CDS |
| ACTGGGGAATCAAGAGAATT+TGG | 0.246551 | 1.1:+19243897 | MS.gene026383:CDS |
| TCCCCAGTCATTAAACTTAC+AGG | 0.268465 | 1.1:-19243882 | None:intergenic |
| TAGCAAATAAGTTGAAATCT+TGG | 0.305874 | 1.1:-19243848 | None:intergenic |
| ACATAAGAAAAGAAAGAAAA+AGG | 0.328524 | 1.1:+19245665 | MS.gene026383:CDS |
| TGTGGTAACATAGGTTTGTT+TGG | 0.349768 | 1.1:-19243105 | None:intergenic |
| GAAGAGCTAGTTAAGAAGTA+TGG | 0.383568 | 1.1:+19248796 | MS.gene026383:CDS |
| AATAGATCTGCAATTGATTC+TGG | 0.403345 | 1.1:-19248820 | None:intergenic |
| AAACAGGCTTATTACAATCC+TGG | 0.410680 | 1.1:+19243256 | MS.gene026383:intron |
| TTCCTTGTAGAAAATTCATC+TGG | 0.413848 | 1.1:+19244485 | MS.gene026383:intron |
| TCAGTACATCTTGCAAAATC+AGG | 0.425666 | 1.1:+19243336 | MS.gene026383:CDS |
| AAGATCAAAGATAAAGAAAC+AGG | 0.437513 | 1.1:+19245711 | MS.gene026383:CDS |
| AAGGAAGAATCCACTCCGTT+TGG | 0.441874 | 1.1:+19242937 | MS.gene026383:CDS |
| TGTAGAAAATTCATCTGGTC+TGG | 0.448465 | 1.1:+19244490 | MS.gene026383:intron |
| TAAGCTTTCTGAGGAATGTC+TGG | 0.463695 | 1.1:+19246926 | MS.gene026383:CDS |
| TGGAAGACCTTACAATTTCA+CGG | 0.479597 | 1.1:+19242957 | MS.gene026383:CDS |
| TAATAAGATAGACACTCTTA+AGG | 0.488014 | 1.1:+19246872 | MS.gene026383:CDS |
| GCTTAGCAAGCGTTTGTGCT+AGG | 0.489007 | 1.1:-19246908 | None:intergenic |
| GTTAAAATGATGGACCTCAA+TGG | 0.494777 | 1.1:-19246970 | None:intergenic |
| AACAGGCTTATTACAATCCT+GGG | 0.495397 | 1.1:+19243257 | MS.gene026383:intron |
| TGAGGCACCGTGAAATTGTA+AGG | 0.513205 | 1.1:-19242964 | None:intergenic |
| GGTTTATTGGACAGCCTCAC+GGG | 0.515395 | 1.1:-19243503 | None:intergenic |
| CAACCTGTAAGTTTAATGAC+TGG | 0.518291 | 1.1:+19243879 | MS.gene026383:CDS |
| AACCTGTAAGTTTAATGACT+GGG | 0.521729 | 1.1:+19243880 | MS.gene026383:CDS |
| GGGTTTATTGGACAGCCTCA+CGG | 0.528698 | 1.1:-19243504 | None:intergenic |
| CTTCAACGTGATGCTCTACA+TGG | 0.529457 | 1.1:+19243479 | MS.gene026383:CDS |
| ATGTACTGATGATACAAGTA+AGG | 0.542138 | 1.1:-19243322 | None:intergenic |
| ACATTGGACTACAGCTATGC+AGG | 0.556528 | 1.1:+19243125 | MS.gene026383:CDS |
| GAACAAATTGTACCTCATTG+AGG | 0.556643 | 1.1:-19243958 | None:intergenic |
| GGCTCACCTCAACAACTATG+TGG | 0.564253 | 1.1:-19243526 | None:intergenic |
| AAGGAGCAGCTGCAAGTGGA+TGG | 0.564358 | 1.1:-19243303 | None:intergenic |
| GTAGTCCAATGTGGTAACAT+AGG | 0.564454 | 1.1:-19243114 | None:intergenic |
| GAATTTGGGGACAGTCATCA+AGG | 0.574576 | 1.1:+19244517 | MS.gene026383:CDS |
| TCTAACATGATTACTGCGGA+TGG | 0.576063 | 1.1:+19244316 | MS.gene026383:CDS |
| GCTCACCTCAACAACTATGT+GGG | 0.580762 | 1.1:-19243525 | None:intergenic |
| AAATTGTAAGGTCTTCCAAA+CGG | 0.581928 | 1.1:-19242952 | None:intergenic |
| AAGTAAGGAGCAGCTGCAAG+TGG | 0.592524 | 1.1:-19243307 | None:intergenic |
| TTTCTCGATCTTGATGGGGA+AGG | 0.594200 | 1.1:+19242918 | None:intergenic |
| TAAACCCCACATAGTTGTTG+AGG | 0.602835 | 1.1:+19243520 | MS.gene026383:CDS |
| ACAAACCTATGTTACCACAT+TGG | 0.603220 | 1.1:+19243109 | MS.gene026383:CDS |
| AACGCTTGCTAAGCTTTCTG+AGG | 0.605311 | 1.1:+19246917 | MS.gene026383:CDS |
| AAAGTATTTGGAGTAGACCC+AGG | 0.610691 | 1.1:-19243274 | None:intergenic |
| CACCACAAAGAGTTTCAAGT+AGG | 0.611543 | 1.1:-19248853 | None:intergenic |
| CAATGAAAATGATTCCATTG+AGG | 0.612331 | 1.1:+19246956 | MS.gene026383:CDS |
| CTGGTCTGGCTCAGAATTTG+GGG | 0.624581 | 1.1:+19244504 | MS.gene026383:CDS |
| ACCTGTAAGTTTAATGACTG+GGG | 0.644193 | 1.1:+19243881 | MS.gene026383:CDS |
| CTCACCTCAACAACTATGTG+GGG | 0.660296 | 1.1:-19243524 | None:intergenic |
| GATTTACTGACATCATCTTG+AGG | 0.660566 | 1.1:-19242982 | None:intergenic |
| TGTGTGCACAGTGCAGCAAG+TGG | 0.664216 | 1.1:+19244036 | MS.gene026383:intron |
| GTAAGGTCTTCCAAACGGAG+TGG | 0.675114 | 1.1:-19242947 | None:intergenic |
| TAAATCTAACATGATTACTG+CGG | 0.677606 | 1.1:+19244312 | MS.gene026383:CDS |
| AACATCGACATTAACAACGT+CGG | 0.677992 | 1.1:-19244549 | None:intergenic |
| ATGCTCTACATGGTCCCGTG+AGG | 0.706895 | 1.1:+19243489 | MS.gene026383:CDS |
| ACAGGGATGGAACCTCAATG+AGG | 0.714168 | 1.1:+19243946 | MS.gene026383:CDS |
| TGCATAGCTGTAGTCCAATG+TGG | 0.721179 | 1.1:-19243123 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAACTAAAAAACT+AGG | + | chr1.1:19247125-19247144 | MS.gene026383:intron | 10.0% |
| !! | TAATTTATTTATGATACTAT+TGG | - | chr1.1:19248227-19248246 | None:intergenic | 10.0% |
| !!! | ATACTTTTGTAATTAATAAA+AGG | + | chr1.1:19247150-19247169 | MS.gene026383:intron | 10.0% |
| !! | AAATGTCAATTAGAAAAAAT+AGG | - | chr1.1:19246044-19246063 | None:intergenic | 15.0% |
| !! | ATTTAATAAAATAGAAGTGA+TGG | + | chr1.1:19245029-19245048 | MS.gene026383:intron | 15.0% |
| !! | TATCATAGGTTATAAATAAT+AGG | - | chr1.1:19248559-19248578 | None:intergenic | 15.0% |
| !!! | AGTTGAAAAAAAAACTTTTT+GGG | - | chr1.1:19245920-19245939 | None:intergenic | 15.0% |
| !!! | ATAATTTTTTATTCAGACTT+GGG | - | chr1.1:19244017-19244036 | None:intergenic | 15.0% |
| !!! | CAATATTTTTTGTAATTATG+AGG | - | chr1.1:19245799-19245818 | None:intergenic | 15.0% |
| !!! | GAAATTTTCATATTTCTTTA+GGG | + | chr1.1:19243645-19243664 | MS.gene026383:intron | 15.0% |
| !!! | TCTTATTTTAAATTTCAAAC+AGG | + | chr1.1:19243240-19243259 | MS.gene026383:intron | 15.0% |
| !!! | TGAAATTTTCATATTTCTTT+AGG | + | chr1.1:19243644-19243663 | MS.gene026383:intron | 15.0% |
| !!! | TTTAAAATTATTCGATAGTA+TGG | + | chr1.1:19244221-19244240 | MS.gene026383:intron | 15.0% |
| !!! | TTTTATAAATTATGTAATCC+AGG | - | chr1.1:19246762-19246781 | None:intergenic | 15.0% |
| !! | AAGAAATGAGTAGTTTATTA+AGG | + | chr1.1:19244197-19244216 | MS.gene026383:intron | 20.0% |
| !! | AAGTTTAATTCTTAACTATC+TGG | + | chr1.1:19245588-19245607 | MS.gene026383:intron | 20.0% |
| !! | AATGTCTATGAATTTGATAA+TGG | + | chr1.1:19245820-19245839 | MS.gene026383:intron | 20.0% |
| !! | ACATAAGAAAAGAAAGAAAA+AGG | + | chr1.1:19245665-19245684 | MS.gene026383:CDS | 20.0% |
| !! | ACCTTCTTAAAAAATATGTT+TGG | - | chr1.1:19248350-19248369 | None:intergenic | 20.0% |
| !! | ATATATCTATTGAAAGGTTT+AGG | - | chr1.1:19243550-19243569 | None:intergenic | 20.0% |
| !! | ATGATGTCTATAAATAACAA+GGG | - | chr1.1:19247400-19247419 | None:intergenic | 20.0% |
| !! | CAATGAATATATCTATTGAA+AGG | - | chr1.1:19243556-19243575 | None:intergenic | 20.0% |
| !! | GTAACATAGATTTAGAAAAA+TGG | + | chr1.1:19245140-19245159 | MS.gene026383:intron | 20.0% |
| !! | TACATGATTATGATTATACA+TGG | + | chr1.1:19246521-19246540 | MS.gene026383:intron | 20.0% |
| !! | TATATCATCTCAAAATCTTA+AGG | + | chr1.1:19247268-19247287 | MS.gene026383:intron | 20.0% |
| !! | TATTAGATAAAATTAGAGTG+AGG | - | chr1.1:19245943-19245962 | None:intergenic | 20.0% |
| !! | TGTTATGTGCTTTAATAAAT+AGG | - | chr1.1:19246207-19246226 | None:intergenic | 20.0% |
| !! | TTATTTATGATACTATTGGA+GGG | - | chr1.1:19248223-19248242 | None:intergenic | 20.0% |
| !! | TTCTTGAATGAATACTAAAA+CGG | - | chr1.1:19247818-19247837 | None:intergenic | 20.0% |
| !! | TTTATTTATGATACTATTGG+AGG | - | chr1.1:19248224-19248243 | None:intergenic | 20.0% |
| !!! | ATATGAATGTTTATGCATTT+TGG | + | chr1.1:19243768-19243787 | MS.gene026383:intron | 20.0% |
| !!! | ATTCTAGCTAAATATATATG+GGG | + | chr1.1:19245527-19245546 | MS.gene026383:intron | 20.0% |
| !!! | CATAATTTTTTATTCAGACT+TGG | - | chr1.1:19244018-19244037 | None:intergenic | 20.0% |
| !!! | CATTCTAGCTAAATATATAT+GGG | + | chr1.1:19245526-19245545 | MS.gene026383:intron | 20.0% |
| !!! | GAGTTGAAAAAAAAACTTTT+TGG | - | chr1.1:19245921-19245940 | None:intergenic | 20.0% |
| !!! | GATCATACAGATATTTTTAT+AGG | - | chr1.1:19245344-19245363 | None:intergenic | 20.0% |
| !!! | TAAGATTTTGAGATGATATA+TGG | - | chr1.1:19247268-19247287 | None:intergenic | 20.0% |
| !!! | TAGTAATGGAAGATAATATT+TGG | - | chr1.1:19246663-19246682 | None:intergenic | 20.0% |
| !!! | TATGTTTTATTATGTTCAGA+AGG | + | chr1.1:19244405-19244424 | MS.gene026383:intron | 20.0% |
| !!! | TTATTCAAAGCTTTTGATAT+TGG | + | chr1.1:19248676-19248695 | MS.gene026383:intron | 20.0% |
| !!! | TTTTTTCCAAATAAAGAAGT+AGG | + | chr1.1:19248515-19248534 | MS.gene026383:intron | 20.0% |
| ! | AAATGCATGTTTAGGAAATA+AGG | - | chr1.1:19246109-19246128 | None:intergenic | 25.0% |
| ! | AACTCATACACAATTCATTA+TGG | - | chr1.1:19243737-19243756 | None:intergenic | 25.0% |
| ! | AAGATAATATTTGGCTGTTT+GGG | - | chr1.1:19246654-19246673 | None:intergenic | 25.0% |
| ! | AAGATCAAAGATAAAGAAAC+AGG | + | chr1.1:19245711-19245730 | MS.gene026383:CDS | 25.0% |
| ! | AAGGAACTTATATAAGCAAA+AGG | + | chr1.1:19247910-19247929 | MS.gene026383:intron | 25.0% |
| ! | AAGTTAAGAATATCGTTTCT+TGG | - | chr1.1:19246309-19246328 | None:intergenic | 25.0% |
| ! | ACAATCATGTTCCAAATAAA+GGG | - | chr1.1:19246498-19246517 | None:intergenic | 25.0% |
| ! | ACATAGATTTAGAAAAATGG+AGG | + | chr1.1:19245143-19245162 | MS.gene026383:intron | 25.0% |
| ! | AGAAAGTAAATTCCTTCTTA+AGG | + | chr1.1:19245560-19245579 | MS.gene026383:intron | 25.0% |
| ! | ATAAAACGCAACAAATAAAG+AGG | - | chr1.1:19246999-19247018 | None:intergenic | 25.0% |
| ! | ATACATATTACTGCTTTGTA+CGG | + | chr1.1:19243366-19243385 | MS.gene026383:intron | 25.0% |
| ! | ATATATTTAGCTAGAATGCA+GGG | - | chr1.1:19245524-19245543 | None:intergenic | 25.0% |
| ! | ATCTAAGTTATCTAACATGA+AGG | + | chr1.1:19248621-19248640 | MS.gene026383:intron | 25.0% |
| ! | ATGAGGATAACTGTATATAA+CGG | - | chr1.1:19245782-19245801 | None:intergenic | 25.0% |
| ! | ATTATCTTCCATTACTATTG+TGG | + | chr1.1:19246666-19246685 | MS.gene026383:intron | 25.0% |
| ! | ATTCAACTAAGATACTTGTT+TGG | + | chr1.1:19247026-19247045 | MS.gene026383:intron | 25.0% |
| ! | CAAATAGGTACAAGTATATT+GGG | - | chr1.1:19246170-19246189 | None:intergenic | 25.0% |
| ! | CATGATGTCTATAAATAACA+AGG | - | chr1.1:19247401-19247420 | None:intergenic | 25.0% |
| ! | CTATACATACAATATGTGAT+GGG | - | chr1.1:19245242-19245261 | None:intergenic | 25.0% |
| ! | GAATTAGGAACAATAAACAA+TGG | - | chr1.1:19247604-19247623 | None:intergenic | 25.0% |
| ! | GATTATGATTATACATGGTA+GGG | + | chr1.1:19246526-19246545 | MS.gene026383:intron | 25.0% |
| ! | GATTTATGCTTCTTAGTTAA+AGG | - | chr1.1:19244298-19244317 | None:intergenic | 25.0% |
| ! | GCAAATATTAGAAAACAAGA+TGG | - | chr1.1:19247095-19247114 | None:intergenic | 25.0% |
| ! | GTCATCTAACAAAATTAACT+TGG | - | chr1.1:19248650-19248669 | None:intergenic | 25.0% |
| ! | TAAAACGCAACAAATAAAGA+GGG | - | chr1.1:19246998-19247017 | None:intergenic | 25.0% |
| ! | TAAATCATTCCACTAGTAAT+TGG | - | chr1.1:19243685-19243704 | None:intergenic | 25.0% |
| ! | TAAATCTAACATGATTACTG+CGG | + | chr1.1:19244312-19244331 | MS.gene026383:CDS | 25.0% |
| ! | TAAGGGATATAACAAAATGT+AGG | - | chr1.1:19247985-19248004 | None:intergenic | 25.0% |
| ! | TAATAAGATAGACACTCTTA+AGG | + | chr1.1:19246872-19246891 | MS.gene026383:CDS | 25.0% |
| ! | TACAATCATGTTCCAAATAA+AGG | - | chr1.1:19246499-19246518 | None:intergenic | 25.0% |
| ! | TATAAATTATGTAATCCAGG+AGG | - | chr1.1:19246759-19246778 | None:intergenic | 25.0% |
| ! | TATACATACAATATGTGATG+GGG | - | chr1.1:19245241-19245260 | None:intergenic | 25.0% |
| ! | TATATATTTAGCTAGAATGC+AGG | - | chr1.1:19245525-19245544 | None:intergenic | 25.0% |
| ! | TATGTGCTTTAATAAATAGG+TGG | - | chr1.1:19246204-19246223 | None:intergenic | 25.0% |
| ! | TATGTTTATGGTTCAATTTG+AGG | - | chr1.1:19247556-19247575 | None:intergenic | 25.0% |
| ! | TATTTATGATACTATTGGAG+GGG | - | chr1.1:19248222-19248241 | None:intergenic | 25.0% |
| ! | TCTATACATACAATATGTGA+TGG | - | chr1.1:19245243-19245262 | None:intergenic | 25.0% |
| ! | TCTTGAATGAATACTAAAAC+GGG | - | chr1.1:19247817-19247836 | None:intergenic | 25.0% |
| ! | TGATGCTCAACTTAAAAATA+TGG | + | chr1.1:19244571-19244590 | MS.gene026383:CDS | 25.0% |
| ! | TGATTATGATTATACATGGT+AGG | + | chr1.1:19246525-19246544 | MS.gene026383:intron | 25.0% |
| ! | TTACCAATTAGTTGGTTAAT+TGG | - | chr1.1:19247444-19247463 | None:intergenic | 25.0% |
| ! | TTCCTAAACATGCATTTAAA+TGG | + | chr1.1:19246112-19246131 | MS.gene026383:intron | 25.0% |
| ! | TTCTATAACTATTGCCAATT+TGG | - | chr1.1:19245379-19245398 | None:intergenic | 25.0% |
| ! | TTGGAAAAAAAACTTCGAAT+GGG | - | chr1.1:19248505-19248524 | None:intergenic | 25.0% |
| ! | TTGTTACAAAGAGATATCAT+AGG | - | chr1.1:19248573-19248592 | None:intergenic | 25.0% |
| ! | TTTCCAATTAACCAACTAAT+TGG | + | chr1.1:19247438-19247457 | MS.gene026383:intron | 25.0% |
| ! | TTTGGAAAAAAAACTTCGAA+TGG | - | chr1.1:19248506-19248525 | None:intergenic | 25.0% |
| !! | AACGATATTCTTAACTTGAT+TGG | + | chr1.1:19246312-19246331 | MS.gene026383:intron | 25.0% |
| !! | ATGTGCGATTTTATATAGAA+GGG | - | chr1.1:19248022-19248041 | None:intergenic | 25.0% |
| !! | GCATTCTAGCTAAATATATA+TGG | + | chr1.1:19245525-19245544 | MS.gene026383:intron | 25.0% |
| !! | TAATTGGTAACTAACTCATT+AGG | + | chr1.1:19247454-19247473 | MS.gene026383:intron | 25.0% |
| !! | TAGCAAATAAGTTGAAATCT+TGG | - | chr1.1:19243851-19243870 | None:intergenic | 25.0% |
| !! | TGTCTATGAAATTCATTTTC+TGG | + | chr1.1:19243606-19243625 | MS.gene026383:intron | 25.0% |
| !! | TTTATTTGGAACATGATTGT+AGG | + | chr1.1:19246498-19246517 | MS.gene026383:intron | 25.0% |
| !!! | ACAGATATTTTTATAGGACT+AGG | - | chr1.1:19245338-19245357 | None:intergenic | 25.0% |
| !!! | AGGCAATTATTTTTAATGAG+TGG | + | chr1.1:19247288-19247307 | MS.gene026383:intron | 25.0% |
| !!! | AGTTGAAATCTTGGTTTTTT+TGG | - | chr1.1:19243842-19243861 | None:intergenic | 25.0% |
| !!! | ATTTTCATATTTCTTTAGGG+TGG | + | chr1.1:19243648-19243667 | MS.gene026383:intron | 25.0% |
| !!! | CATATTTTTTAAGAAGGTCT+TGG | + | chr1.1:19248352-19248371 | MS.gene026383:intron | 25.0% |
| !!! | CTTATTTTTCTTGTGTAAGA+AGG | + | chr1.1:19248387-19248406 | MS.gene026383:intron | 25.0% |
| !!! | GCCAAACATATTTTTTAAGA+AGG | + | chr1.1:19248346-19248365 | MS.gene026383:intron | 25.0% |
| !!! | GGATGGTTATAAAAAGTATT+TGG | - | chr1.1:19243289-19243308 | None:intergenic | 25.0% |
| !!! | GTTTTAGTATTCATTCAAGA+AGG | + | chr1.1:19247817-19247836 | MS.gene026383:intron | 25.0% |
| !!! | TTGTTTTGAGGTTATGTTTA+TGG | - | chr1.1:19247568-19247587 | None:intergenic | 25.0% |
| !!! | TTTTCATATTTCTTTAGGGT+GGG | + | chr1.1:19243649-19243668 | MS.gene026383:intron | 25.0% |
| AAAAAGAAATGCAGCCAAAT+AGG | - | chr1.1:19245631-19245650 | None:intergenic | 30.0% | |
| AAAACGCAACAAATAAAGAG+GGG | - | chr1.1:19246997-19247016 | None:intergenic | 30.0% | |
| AAAGAAAAAGGTTGTCAAAC+AGG | + | chr1.1:19245677-19245696 | MS.gene026383:CDS | 30.0% | |
| AAAGTCTAGCATTTCCTATT+TGG | + | chr1.1:19245614-19245633 | MS.gene026383:intron | 30.0% | |
| AAATTGTAAGGTCTTCCAAA+CGG | - | chr1.1:19242955-19242974 | None:intergenic | 30.0% | |
| AACCTGTAAGTTTAATGACT+GGG | + | chr1.1:19243880-19243899 | MS.gene026383:CDS | 30.0% | |
| AAGAAATGAAAACTGTTAGG+AGG | + | chr1.1:19247173-19247192 | MS.gene026383:intron | 30.0% | |
| AAGGTCATGATAAAAAGCAA+AGG | - | chr1.1:19246090-19246109 | None:intergenic | 30.0% | |
| AATGGCAGTTCATTCAAATT+CGG | - | chr1.1:19244768-19244787 | None:intergenic | 30.0% | |
| ACTAACAAATGTCTAACACT+CGG | + | chr1.1:19245091-19245110 | MS.gene026383:intron | 30.0% | |
| AGGAAGAAATGAAAACTGTT+AGG | + | chr1.1:19247170-19247189 | MS.gene026383:intron | 30.0% | |
| AGGGGAATAAGAATTGAATA+AGG | - | chr1.1:19248003-19248022 | None:intergenic | 30.0% | |
| ATAAATAACAAGGGTTGAGA+GGG | - | chr1.1:19247391-19247410 | None:intergenic | 30.0% | |
| ATACATACAATATGTGATGG+GGG | - | chr1.1:19245240-19245259 | None:intergenic | 30.0% | |
| ATATCTAACAAGATTCGAGA+TGG | - | chr1.1:19245285-19245304 | None:intergenic | 30.0% | |
| ATCTCATTCACACATGTTAT+AGG | + | chr1.1:19244702-19244721 | MS.gene026383:intron | 30.0% | |
| ATCTTGTTAGATATGCTTGT+TGG | + | chr1.1:19245291-19245310 | MS.gene026383:intron | 30.0% | |
| ATGTAAAAAGAAAAAGACGC+TGG | + | chr1.1:19245863-19245882 | MS.gene026383:intron | 30.0% | |
| ATGTAATTGAATCCACCTAA+TGG | + | chr1.1:19246570-19246589 | MS.gene026383:intron | 30.0% | |
| CAACAACATTTCCCTTTATT+TGG | + | chr1.1:19246484-19246503 | MS.gene026383:intron | 30.0% | |
| CAATGAAAATGATTCCATTG+AGG | + | chr1.1:19246956-19246975 | MS.gene026383:CDS | 30.0% | |
| CCAAATAGGTACAAGTATAT+TGG | - | chr1.1:19246171-19246190 | None:intergenic | 30.0% | |
| CCAATATACTTGTACCTATT+TGG | + | chr1.1:19246168-19246187 | MS.gene026383:intron | 30.0% | |
| CTTGAATGAATACTAAAACG+GGG | - | chr1.1:19247816-19247835 | None:intergenic | 30.0% | |
| GAAGATAATATTTGGCTGTT+TGG | - | chr1.1:19246655-19246674 | None:intergenic | 30.0% | |
| GAATAGAAACACAAAGATTG+TGG | - | chr1.1:19247365-19247384 | None:intergenic | 30.0% | |
| GATGTCAGTAAATCATGTTA+TGG | + | chr1.1:19242991-19243010 | MS.gene026383:intron | 30.0% | |
| GGGGAATAAGAATTGAATAA+GGG | - | chr1.1:19248002-19248021 | None:intergenic | 30.0% | |
| TAAACTTAGCAACCTTAAGA+AGG | - | chr1.1:19245575-19245594 | None:intergenic | 30.0% | |
| TAGCATAAAACAGCTGTATT+TGG | + | chr1.1:19246011-19246030 | MS.gene026383:intron | 30.0% | |
| TATAAATAACAAGGGTTGAG+AGG | - | chr1.1:19247392-19247411 | None:intergenic | 30.0% | |
| TCAGGACTTTCTTGTTAAAT+GGG | + | chr1.1:19248050-19248069 | MS.gene026383:intron | 30.0% | |
| TGAGTTAGTTACCAATTAGT+TGG | - | chr1.1:19247452-19247471 | None:intergenic | 30.0% | |
| TTCAACTTCCACAATAGTAA+TGG | - | chr1.1:19246677-19246696 | None:intergenic | 30.0% | |
| TTCAGGACTTTCTTGTTAAA+TGG | + | chr1.1:19248049-19248068 | MS.gene026383:intron | 30.0% | |
| TTCCTTGTAGAAAATTCATC+TGG | + | chr1.1:19244485-19244504 | MS.gene026383:intron | 30.0% | |
| TTGAAACTGATCATCAATGA+AGG | - | chr1.1:19246391-19246410 | None:intergenic | 30.0% | |
| ! | AATAGATCTGCAATTGATTC+TGG | - | chr1.1:19248823-19248842 | None:intergenic | 30.0% |
| ! | AGTTCTTACAAGATCAGTTT+TGG | - | chr1.1:19245417-19245436 | None:intergenic | 30.0% |
| ! | ATGGTATTGTAACTTTTGTG+TGG | + | chr1.1:19244590-19244609 | MS.gene026383:intron | 30.0% |
| ! | ATGTACTGATGATACAAGTA+AGG | - | chr1.1:19243325-19243344 | None:intergenic | 30.0% |
| ! | ATTAGGTGGATTCAATTACA+TGG | - | chr1.1:19246571-19246590 | None:intergenic | 30.0% |
| ! | CTCAATGGAATCATTTTCAT+TGG | - | chr1.1:19246958-19246977 | None:intergenic | 30.0% |
| ! | GAAATGGTACACAGAAATTT+TGG | + | chr1.1:19243816-19243835 | MS.gene026383:CDS | 30.0% |
| ! | GATGTGCGATTTTATATAGA+AGG | - | chr1.1:19248023-19248042 | None:intergenic | 30.0% |
| ! | TAGGTAGTGTTGTTAAATAG+AGG | + | chr1.1:19244721-19244740 | MS.gene026383:intron | 30.0% |
| ! | TGCATTTTAGACAGTAAAGA+TGG | + | chr1.1:19246245-19246264 | MS.gene026383:intron | 30.0% |
| ! | TGCCATTTAAATGCATGTTT+AGG | - | chr1.1:19246117-19246136 | None:intergenic | 30.0% |
| ! | TGTGCGATTTTATATAGAAG+GGG | - | chr1.1:19248021-19248040 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGTATGATCAT+AGG | + | chr1.1:19246618-19246637 | MS.gene026383:intron | 30.0% |
| ! | TTTTTATAGGACTAGGTAGA+TGG | - | chr1.1:19245331-19245350 | None:intergenic | 30.0% |
| !! | AATGTTTATGCATTTTGGTC+AGG | + | chr1.1:19243773-19243792 | MS.gene026383:intron | 30.0% |
| !! | ACGCTGGTTATTTTCATTAT+TGG | + | chr1.1:19245879-19245898 | MS.gene026383:intron | 30.0% |
| !! | CTTTCACATTCTTTGTTGTT+TGG | + | chr1.1:19243436-19243455 | MS.gene026383:intron | 30.0% |
| !! | TAGTTCTGAGTATTGTATTG+TGG | + | chr1.1:19248712-19248731 | MS.gene026383:intron | 30.0% |
| !! | TTCTGTTTTCGCTTTTCATT+AGG | + | chr1.1:19247063-19247082 | MS.gene026383:intron | 30.0% |
| !! | TTTCATATTTCTTTAGGGTG+GGG | + | chr1.1:19243650-19243669 | MS.gene026383:intron | 30.0% |
| !!! | ATTACAAGTTGGTCTTTTGA+TGG | - | chr1.1:19247694-19247713 | None:intergenic | 30.0% |
| AAACAGGCTTATTACAATCC+TGG | + | chr1.1:19243256-19243275 | MS.gene026383:intron | 35.0% | |
| AAAGAGGGGAGTTAAAATGA+TGG | - | chr1.1:19246983-19247002 | None:intergenic | 35.0% | |
| AAAGCACATAACAGAACTCT+AGG | + | chr1.1:19246214-19246233 | MS.gene026383:intron | 35.0% | |
| AACAACTATGTGGGGTTTAT+TGG | - | chr1.1:19243519-19243538 | None:intergenic | 35.0% | |
| AACAGGCTTATTACAATCCT+GGG | + | chr1.1:19243257-19243276 | MS.gene026383:intron | 35.0% | |
| AACATCGACATTAACAACGT+CGG | - | chr1.1:19244552-19244571 | None:intergenic | 35.0% | |
| AAGCAAAAGGAGAATGAACT+AGG | + | chr1.1:19247923-19247942 | MS.gene026383:intron | 35.0% | |
| ACAAACCTATGTTACCACAT+TGG | + | chr1.1:19243109-19243128 | MS.gene026383:CDS | 35.0% | |
| ACCAAGATACCATCACAAAT+TGG | - | chr1.1:19243174-19243193 | None:intergenic | 35.0% | |
| ACCAATTTGTGATGGTATCT+TGG | + | chr1.1:19243170-19243189 | MS.gene026383:intron | 35.0% | |
| ACCTGTAAGTTTAATGACTG+GGG | + | chr1.1:19243881-19243900 | MS.gene026383:CDS | 35.0% | |
| ATAGGTAGAAGAGATTAGAG+AGG | - | chr1.1:19248541-19248560 | None:intergenic | 35.0% | |
| ATGCAGTACTCAAACAGAAA+AGG | + | chr1.1:19247891-19247910 | MS.gene026383:intron | 35.0% | |
| CAACCTGTAAGTTTAATGAC+TGG | + | chr1.1:19243879-19243898 | MS.gene026383:CDS | 35.0% | |
| CAATCGCAGATTACACAAAA+TGG | - | chr1.1:19244786-19244805 | None:intergenic | 35.0% | |
| CATTATGATATGCACACACT+TGG | + | chr1.1:19244676-19244695 | MS.gene026383:intron | 35.0% | |
| CGATTGAAAACACTAGTTAC+AGG | + | chr1.1:19244800-19244819 | MS.gene026383:intron | 35.0% | |
| CTTAAGCTTTCAAGAGAATC+TGG | - | chr1.1:19245188-19245207 | None:intergenic | 35.0% | |
| GAACAAATTGTACCTCATTG+AGG | - | chr1.1:19243961-19243980 | None:intergenic | 35.0% | |
| GAAGAGCTAGTTAAGAAGTA+TGG | + | chr1.1:19248796-19248815 | MS.gene026383:CDS | 35.0% | |
| GATTTACTGACATCATCTTG+AGG | - | chr1.1:19242985-19243004 | None:intergenic | 35.0% | |
| GTCTAATTACATCCTTTCTG+TGG | + | chr1.1:19244263-19244282 | MS.gene026383:intron | 35.0% | |
| GTGGTTGCAAAATTCCAAAT+AGG | - | chr1.1:19246185-19246204 | None:intergenic | 35.0% | |
| GTTGTATGATCATAGGATCT+TGG | + | chr1.1:19246625-19246644 | MS.gene026383:intron | 35.0% | |
| TAACTATTGCCAATTTGGCA+TGG | - | chr1.1:19245374-19245393 | None:intergenic | 35.0% | |
| TACTCTGAACCAATTTGTGA+TGG | + | chr1.1:19243162-19243181 | MS.gene026383:intron | 35.0% | |
| TAGGTACAAGTATATTGGGT+AGG | - | chr1.1:19246166-19246185 | None:intergenic | 35.0% | |
| TATGGTTCAATTTGAGGACA+GGG | - | chr1.1:19247550-19247569 | None:intergenic | 35.0% | |
| TCAGTACATCTTGCAAAATC+AGG | + | chr1.1:19243336-19243355 | MS.gene026383:CDS | 35.0% | |
| TCATTTGACTCTGCTGAATT+AGG | - | chr1.1:19247619-19247638 | None:intergenic | 35.0% | |
| TGGAAGACCTTACAATTTCA+CGG | + | chr1.1:19242957-19242976 | MS.gene026383:CDS | 35.0% | |
| TGTAGAAAATTCATCTGGTC+TGG | + | chr1.1:19244490-19244509 | MS.gene026383:intron | 35.0% | |
| TTATGGTTCAATTTGAGGAC+AGG | - | chr1.1:19247551-19247570 | None:intergenic | 35.0% | |
| TTGTACGAAACTAACACCTA+TGG | - | chr1.1:19245062-19245081 | None:intergenic | 35.0% | |
| ! | AAGTCTGCTCTTTTACCATT+AGG | - | chr1.1:19246588-19246607 | None:intergenic | 35.0% |
| ! | AAGTGATGGAATGTAACCAT+AGG | + | chr1.1:19245043-19245062 | MS.gene026383:intron | 35.0% |
| ! | CTGCATTTCTTTTTACAGGA+AGG | + | chr1.1:19245637-19245656 | MS.gene026383:intron | 35.0% |
| ! | GACCAGATGAATTTTCTACA+AGG | - | chr1.1:19244490-19244509 | None:intergenic | 35.0% |
| ! | TGTGGTAACATAGGTTTGTT+TGG | - | chr1.1:19243108-19243127 | None:intergenic | 35.0% |
| ! | TTATAGAATGTTTTCCAGCG+TGG | + | chr1.1:19245391-19245410 | MS.gene026383:intron | 35.0% |
| ! | TTGGCTGCATTTCTTTTTAC+AGG | + | chr1.1:19245633-19245652 | MS.gene026383:intron | 35.0% |
| !! | CATTTGTTATAGTTTCCTCC+TGG | + | chr1.1:19246741-19246760 | MS.gene026383:intron | 35.0% |
| !! | CTACTGATTTGAGTGTGATT+TGG | + | chr1.1:19248762-19248781 | MS.gene026383:intron | 35.0% |
| !! | GTTAAAATGATGGACCTCAA+TGG | - | chr1.1:19246973-19246992 | None:intergenic | 35.0% |
| !!! | AAGTTGGTCTTTTGATGGAT+AGG | - | chr1.1:19247689-19247708 | None:intergenic | 35.0% |
| !!! | ACGATGTAGTGTGGTTTTAT+TGG | - | chr1.1:19244947-19244966 | None:intergenic | 35.0% |
| !!! | AGTTGGTCTTTTGATGGATA+GGG | - | chr1.1:19247688-19247707 | None:intergenic | 35.0% |
| !!! | TGCAAAGGCTTTTTCAGAAA+TGG | + | chr1.1:19243800-19243819 | MS.gene026383:CDS | 35.0% |
| AACCTCAAAACAATCCCTCT+AGG | + | chr1.1:19247575-19247594 | MS.gene026383:intron | 40.0% | |
| AATAAACAATGGCACCCTAG+AGG | - | chr1.1:19247593-19247612 | None:intergenic | 40.0% | |
| AATACTAAAACGGGGTAGAG+AGG | - | chr1.1:19247808-19247827 | None:intergenic | 40.0% | |
| AATCGCACATCATGTTGTTC+AGG | + | chr1.1:19248032-19248051 | MS.gene026383:intron | 40.0% | |
| ACATCGACGCTTCAAATTGA+AGG | - | chr1.1:19245122-19245141 | None:intergenic | 40.0% | |
| ACCAACTTGTAATCTCTGCA+TGG | + | chr1.1:19247701-19247720 | MS.gene026383:intron | 40.0% | |
| ACCTCAAAACAATCCCTCTA+GGG | + | chr1.1:19247576-19247595 | MS.gene026383:intron | 40.0% | |
| ACTATCTGTTGCAGTCAATG+TGG | + | chr1.1:19244909-19244928 | MS.gene026383:intron | 40.0% | |
| ACTGGGGAATCAAGAGAATT+TGG | + | chr1.1:19243897-19243916 | MS.gene026383:CDS | 40.0% | |
| AGGTTGTTATGCAAGTCGAT+AGG | + | chr1.1:19248407-19248426 | MS.gene026383:intron | 40.0% | |
| ATAAACAATGGCACCCTAGA+GGG | - | chr1.1:19247592-19247611 | None:intergenic | 40.0% | |
| ATAGCTCTTCACATTCTTGC+TGG | - | chr1.1:19246851-19246870 | None:intergenic | 40.0% | |
| ATGAAAACTGTTAGGAGGTC+AGG | + | chr1.1:19247178-19247197 | MS.gene026383:intron | 40.0% | |
| ATGCAGGGTTGAAAAATGAC+AGG | - | chr1.1:19245509-19245528 | None:intergenic | 40.0% | |
| CATTTGACGCAATGTATCTG+AGG | - | chr1.1:19247874-19247893 | None:intergenic | 40.0% | |
| CTAGGCTTTCCTACTCTAAA+AGG | + | chr1.1:19248314-19248333 | MS.gene026383:intron | 40.0% | |
| CTATCTGTTGCAGTCAATGT+GGG | + | chr1.1:19244910-19244929 | MS.gene026383:intron | 40.0% | |
| CTTTCTTAGACTAGGACAGA+GGG | + | chr1.1:19243396-19243415 | MS.gene026383:intron | 40.0% | |
| GAGAGGCCTACTTCTTTATT+TGG | - | chr1.1:19248524-19248543 | None:intergenic | 40.0% | |
| GCATGCTTCTTTCTTAGACT+AGG | + | chr1.1:19243388-19243407 | MS.gene026383:intron | 40.0% | |
| GCTCTCACTAACTCATTCTA+CGG | + | chr1.1:19247954-19247973 | MS.gene026383:intron | 40.0% | |
| GTAGTCCAATGTGGTAACAT+AGG | - | chr1.1:19243117-19243136 | None:intergenic | 40.0% | |
| GTGGTATCATACTCAAAGGT+GGG | - | chr1.1:19248262-19248281 | None:intergenic | 40.0% | |
| GTTCTGCCACTGTTATGTTT+CGG | + | chr1.1:19244155-19244174 | MS.gene026383:intron | 40.0% | |
| TAAACCCCACATAGTTGTTG+AGG | + | chr1.1:19243520-19243539 | MS.gene026383:CDS | 40.0% | |
| TAATTAGCAGCAACACACGA+TGG | + | chr1.1:19247772-19247791 | MS.gene026383:intron | 40.0% | |
| TCCATGCAGAGATTACAAGT+TGG | - | chr1.1:19247705-19247724 | None:intergenic | 40.0% | |
| TCCCCAGTCATTAAACTTAC+AGG | - | chr1.1:19243885-19243904 | None:intergenic | 40.0% | |
| TCGAAACCGAAACATAACAG+TGG | - | chr1.1:19244164-19244183 | None:intergenic | 40.0% | |
| TCTAACATGATTACTGCGGA+TGG | + | chr1.1:19244316-19244335 | MS.gene026383:CDS | 40.0% | |
| TCTTTCTTAGACTAGGACAG+AGG | + | chr1.1:19243395-19243414 | MS.gene026383:intron | 40.0% | |
| TGACAATACAACCCACCTAT+CGG | - | chr1.1:19247496-19247515 | None:intergenic | 40.0% | |
| TGAGGGGATTGACAGTAAAA+GGG | - | chr1.1:19247655-19247674 | None:intergenic | 40.0% | |
| TGTTGTAACACGATGTAGTG+TGG | - | chr1.1:19244956-19244975 | None:intergenic | 40.0% | |
| TTACAGGCGCTCTTTGATAT+TGG | + | chr1.1:19244816-19244835 | MS.gene026383:intron | 40.0% | |
| TTCTGCACCCAAAAATGACA+GGG | + | chr1.1:19243929-19243948 | MS.gene026383:CDS | 40.0% | |
| TTGAGGGGATTGACAGTAAA+AGG | - | chr1.1:19247656-19247675 | None:intergenic | 40.0% | |
| TTGGGGTTACCAATTACTAG+TGG | + | chr1.1:19243673-19243692 | MS.gene026383:intron | 40.0% | |
| ! | AAAGTATTTGGAGTAGACCC+AGG | - | chr1.1:19243277-19243296 | None:intergenic | 40.0% |
| ! | AATGAGTTAGTGAGAGCATG+TGG | - | chr1.1:19247951-19247970 | None:intergenic | 40.0% |
| ! | ACTTGATTGGTTATGCCACA+TGG | + | chr1.1:19246325-19246344 | MS.gene026383:intron | 40.0% |
| ! | ATAGGGATGAGACTTTTGAG+GGG | - | chr1.1:19247671-19247690 | None:intergenic | 40.0% |
| ! | ATTGACCAAGAGTTGGTTCT+TGG | - | chr1.1:19247339-19247358 | None:intergenic | 40.0% |
| ! | CTACTCTAAAAGGAGAAGCT+CGG | + | chr1.1:19248324-19248343 | MS.gene026383:intron | 40.0% |
| ! | CTGATTTGAGTGTGATTTGG+TGG | + | chr1.1:19248765-19248784 | MS.gene026383:intron | 40.0% |
| ! | GATAGGGATGAGACTTTTGA+GGG | - | chr1.1:19247672-19247691 | None:intergenic | 40.0% |
| ! | TAAGCTTTCTGAGGAATGTC+TGG | + | chr1.1:19246926-19246945 | MS.gene026383:CDS | 40.0% |
| ! | TCTGCTCTTTTACCATTAGG+TGG | - | chr1.1:19246585-19246604 | None:intergenic | 40.0% |
| ! | TTGACCAAGAGTTGGTTCTT+GGG | - | chr1.1:19247338-19247357 | None:intergenic | 40.0% |
| !! | ATATTTCTTTAGGGTGGGGT+TGG | + | chr1.1:19243654-19243673 | MS.gene026383:intron | 40.0% |
| !! | ATTTGAGTGTGATTTGGTGG+TGG | + | chr1.1:19248768-19248787 | MS.gene026383:intron | 40.0% |
| !! | CATTCTTTGTTGTTTGGTGC+AGG | + | chr1.1:19243442-19243461 | MS.gene026383:intron | 40.0% |
| !! | GGCAAGCTAAGTTGATCAAA+AGG | + | chr1.1:19246346-19246365 | MS.gene026383:intron | 40.0% |
| !! | TATTTCTTTAGGGTGGGGTT+GGG | + | chr1.1:19243655-19243674 | MS.gene026383:intron | 40.0% |
| !!! | AGGACAGGGTGAATGTTTTT+TGG | - | chr1.1:19247536-19247555 | None:intergenic | 40.0% |
| !!! | GACAGGGTGAATGTTTTTTG+GGG | - | chr1.1:19247534-19247553 | None:intergenic | 40.0% |
| !!! | GGACAGGGTGAATGTTTTTT+GGG | - | chr1.1:19247535-19247554 | None:intergenic | 40.0% |
| !!! | GTTCCATCCCTGTCATTTTT+GGG | - | chr1.1:19243939-19243958 | None:intergenic | 40.0% |
| AAAACTGTTAGGAGGTCAGG+TGG | + | chr1.1:19247181-19247200 | MS.gene026383:intron | 45.0% | |
| AAAGTGCAGGTAGCCAAGTT+AGG | - | chr1.1:19248150-19248169 | None:intergenic | 45.0% | |
| AAGGAAGAATCCACTCCGTT+TGG | + | chr1.1:19242937-19242956 | MS.gene026383:CDS | 45.0% | |
| ACATTGGACTACAGCTATGC+AGG | + | chr1.1:19243125-19243144 | MS.gene026383:CDS | 45.0% | |
| ACTCGTAAGACCAACTCGTA+AGG | + | chr1.1:19244850-19244869 | MS.gene026383:intron | 45.0% | |
| AGGAAAGCCTAGAATAAGCC+AGG | - | chr1.1:19248306-19248325 | None:intergenic | 45.0% | |
| AGGAGAATTCTGCCACAGAA+AGG | - | chr1.1:19244278-19244297 | None:intergenic | 45.0% | |
| ATCTGAGGATGGTCATGTCA+CGG | - | chr1.1:19247859-19247878 | None:intergenic | 45.0% | |
| CAAGTACCAACAATCCCGAT+AGG | + | chr1.1:19247478-19247497 | MS.gene026383:intron | 45.0% | |
| CTCACCTCAACAACTATGTG+GGG | - | chr1.1:19243527-19243546 | None:intergenic | 45.0% | |
| CTTCAACGTGATGCTCTACA+TGG | + | chr1.1:19243479-19243498 | MS.gene026383:CDS | 45.0% | |
| CTTCTGCACCCAAAAATGAC+AGG | + | chr1.1:19243928-19243947 | MS.gene026383:CDS | 45.0% | |
| GAATTTGGGGACAGTCATCA+AGG | + | chr1.1:19244517-19244536 | MS.gene026383:CDS | 45.0% | |
| GACAATACAACCCACCTATC+GGG | - | chr1.1:19247495-19247514 | None:intergenic | 45.0% | |
| GCTCACCTCAACAACTATGT+GGG | - | chr1.1:19243528-19243547 | None:intergenic | 45.0% | |
| GGAGGGGAAAAAAATTGCAC+AGG | - | chr1.1:19248206-19248225 | None:intergenic | 45.0% | |
| GGTACATACTAGACCATGAC+TGG | + | chr1.1:19245732-19245751 | MS.gene026383:intron | 45.0% | |
| GGTGGTATCATACTCAAAGG+TGG | - | chr1.1:19248263-19248282 | None:intergenic | 45.0% | |
| GTGAAAGTGAAGCAGATGAC+TGG | - | chr1.1:19243423-19243442 | None:intergenic | 45.0% | |
| TAAGACCAACTCGTAAGGCA+AGG | + | chr1.1:19244855-19244874 | MS.gene026383:intron | 45.0% | |
| TACCAACAATCCCGATAGGT+GGG | + | chr1.1:19247482-19247501 | MS.gene026383:intron | 45.0% | |
| TCCATCTGATGTGCCTAACT+TGG | + | chr1.1:19248134-19248153 | MS.gene026383:intron | 45.0% | |
| TCTTCACATTCTTGCTGGCA+AGG | - | chr1.1:19246846-19246865 | None:intergenic | 45.0% | |
| TGACGCAATGTATCTGAGGA+TGG | - | chr1.1:19247870-19247889 | None:intergenic | 45.0% | |
| TGAGCTGTAGTTCATGTCTC+TGG | - | chr1.1:19244440-19244459 | None:intergenic | 45.0% | |
| TGCATAGCTGTAGTCCAATG+TGG | - | chr1.1:19243126-19243145 | None:intergenic | 45.0% | |
| ! | AACGCTTGCTAAGCTTTCTG+AGG | + | chr1.1:19246917-19246936 | MS.gene026383:CDS | 45.0% |
| ! | ATATGGTGTTAAGCCCACTG+TGG | - | chr1.1:19247251-19247270 | None:intergenic | 45.0% |
| ! | ATCTGGTCTGGCTCAGAATT+TGG | + | chr1.1:19244502-19244521 | MS.gene026383:CDS | 45.0% |
| ! | GGATAGGGATGAGACTTTTG+AGG | - | chr1.1:19247673-19247692 | None:intergenic | 45.0% |
| ! | TATGGTGTTAAGCCCACTGT+GGG | - | chr1.1:19247250-19247269 | None:intergenic | 45.0% |
| ! | TCTGGTCTGGCTCAGAATTT+GGG | + | chr1.1:19244503-19244522 | MS.gene026383:CDS | 45.0% |
| ! | TTTTGGTCAGGATGCTGCAA+AGG | + | chr1.1:19243785-19243804 | MS.gene026383:intron | 45.0% |
| !! | ACCCTAGAGGGATTGTTTTG+AGG | - | chr1.1:19247580-19247599 | None:intergenic | 45.0% |
| !! | ATTTCTTTAGGGTGGGGTTG+GGG | + | chr1.1:19243656-19243675 | MS.gene026383:intron | 45.0% |
| !! | GATCAACTTAGCTTGCCATG+TGG | - | chr1.1:19246343-19246362 | None:intergenic | 45.0% |
| !! | TGAGGCACCGTGAAATTGTA+AGG | - | chr1.1:19242967-19242986 | None:intergenic | 45.0% |
| !!! | CATTTTTGGGTGCAGAAGAC+TGG | - | chr1.1:19243926-19243945 | None:intergenic | 45.0% |
| !!! | CGAGCTTCTCCTTTTAGAGT+AGG | - | chr1.1:19248326-19248345 | None:intergenic | 45.0% |
| !!! | GGTTCCATCCCTGTCATTTT+TGG | - | chr1.1:19243940-19243959 | None:intergenic | 45.0% |
| !!! | CTATTTTATTAAATTATTAT+TGG | - | chr1.1:19245023-19245042 | None:intergenic | 5.0% |
| !!! | TAATTTTTTATATAAATATG+TGG | + | chr1.1:19244116-19244135 | MS.gene026383:intron | 5.0% |
| AACCCACCTATCGGGATTGT+TGG | - | chr1.1:19247487-19247506 | None:intergenic | 50.0% | |
| AAGTAAGGAGCAGCTGCAAG+TGG | - | chr1.1:19243310-19243329 | None:intergenic | 50.0% | |
| ACAGGGATGGAACCTCAATG+AGG | + | chr1.1:19243946-19243965 | MS.gene026383:CDS | 50.0% | |
| ACAGTCCTTGCCTTACGAGT+TGG | - | chr1.1:19244863-19244882 | None:intergenic | 50.0% | |
| AGGCACATCAGATGGACAAG+TGG | - | chr1.1:19248130-19248149 | None:intergenic | 50.0% | |
| AGTGGAATTCACGCCGTTAC+TGG | + | chr1.1:19247306-19247325 | MS.gene026383:intron | 50.0% | |
| CAGATGGACAAGTGGGAGTA+GGG | - | chr1.1:19248122-19248141 | None:intergenic | 50.0% | |
| CGTTTGGCCTGGCTTATTCT+AGG | + | chr1.1:19248296-19248315 | MS.gene026383:intron | 50.0% | |
| CTACCTGCACTTTGCTGACA+TGG | + | chr1.1:19248157-19248176 | MS.gene026383:intron | 50.0% | |
| GCACCCAAAAATGACAGGGA+TGG | + | chr1.1:19243933-19243952 | MS.gene026383:CDS | 50.0% | |
| GCCAAGTTAGGCACATCAGA+TGG | - | chr1.1:19248138-19248157 | None:intergenic | 50.0% | |
| GCTTAGCAAGCGTTTGTGCT+AGG | - | chr1.1:19246911-19246930 | None:intergenic | 50.0% | |
| GGCACATCAGATGGACAAGT+GGG | - | chr1.1:19248129-19248148 | None:intergenic | 50.0% | |
| GGCGGTGGTATCATACTCAA+AGG | - | chr1.1:19248266-19248285 | None:intergenic | 50.0% | |
| GGCTCACCTCAACAACTATG+TGG | - | chr1.1:19243529-19243548 | None:intergenic | 50.0% | |
| GGGTTTATTGGACAGCCTCA+CGG | - | chr1.1:19243507-19243526 | None:intergenic | 50.0% | |
| GGTTTATTGGACAGCCTCAC+GGG | - | chr1.1:19243506-19243525 | None:intergenic | 50.0% | |
| GTAAGGTCTTCCAAACGGAG+TGG | - | chr1.1:19242950-19242969 | None:intergenic | 50.0% | |
| GTACCAACAATCCCGATAGG+TGG | + | chr1.1:19247481-19247500 | MS.gene026383:intron | 50.0% | |
| GTATGATACCACCGCCACTT+AGG | + | chr1.1:19248270-19248289 | MS.gene026383:intron | 50.0% | |
| TCAGATGGACAAGTGGGAGT+AGG | - | chr1.1:19248123-19248142 | None:intergenic | 50.0% | |
| TCCACGATGCCATGCCAAAT+TGG | + | chr1.1:19245362-19245381 | MS.gene026383:intron | 50.0% | |
| TCTTGGGCGGTAACCAGTAA+CGG | - | chr1.1:19247322-19247341 | None:intergenic | 50.0% | |
| ! | ACCAAGAGTTGGTTCTTGGG+CGG | - | chr1.1:19247335-19247354 | None:intergenic | 50.0% |
| ! | CTGGTCTGGCTCAGAATTTG+GGG | + | chr1.1:19244504-19244523 | MS.gene026383:CDS | 50.0% |
| ! | GTGCAATGCAGCAGGTTTTG+TGG | + | chr1.1:19245754-19245773 | MS.gene026383:intron | 50.0% |
| !! | AAGATCAGTTTTGGCCACGC+TGG | - | chr1.1:19245408-19245427 | None:intergenic | 50.0% |
| !! | GTGGAGCATTGACCAAGAGT+TGG | - | chr1.1:19247346-19247365 | None:intergenic | 50.0% |
| !! | GTGTGATTTGGTGGTGGAAC+AGG | + | chr1.1:19248774-19248793 | MS.gene026383:intron | 50.0% |
| AAACGCTACCTAAGTGGCGG+TGG | - | chr1.1:19248281-19248300 | None:intergenic | 55.0% | |
| AAGGAGCAGCTGCAAGTGGA+TGG | - | chr1.1:19243306-19243325 | None:intergenic | 55.0% | |
| ACCGCCACTTAGGTAGCGTT+TGG | + | chr1.1:19248280-19248299 | MS.gene026383:intron | 55.0% | |
| ACCGCCCAAGAACCAACTCT+TGG | + | chr1.1:19247331-19247350 | MS.gene026383:intron | 55.0% | |
| ATGCTCTACATGGTCCCGTG+AGG | + | chr1.1:19243489-19243508 | MS.gene026383:CDS | 55.0% | |
| CACTTAGGTAGCGTTTGGCC+TGG | + | chr1.1:19248285-19248304 | MS.gene026383:intron | 55.0% | |
| CAGGCCAAACGCTACCTAAG+TGG | - | chr1.1:19248287-19248306 | None:intergenic | 55.0% | |
| CATGACTGGTGCAATGCAGC+AGG | + | chr1.1:19245746-19245765 | MS.gene026383:intron | 55.0% | |
| CTGCTGCATTGCACCAGTCA+TGG | - | chr1.1:19245748-19245767 | None:intergenic | 55.0% | |
| GAGCCATGTCAGCAAAGTGC+AGG | - | chr1.1:19248163-19248182 | None:intergenic | 55.0% | |
| GCCAAACGCTACCTAAGTGG+CGG | - | chr1.1:19248284-19248303 | None:intergenic | 55.0% | |
| GCCAATTTGGCATGGCATCG+TGG | - | chr1.1:19245366-19245385 | None:intergenic | 55.0% | |
| GGCAAAGAGGAACCCACAGT+GGG | + | chr1.1:19247235-19247254 | MS.gene026383:intron | 55.0% | |
| TGGCAAAGAGGAACCCACAG+TGG | + | chr1.1:19247234-19247253 | MS.gene026383:intron | 55.0% | |
| TGTGTGCACAGTGCAGCAAG+TGG | + | chr1.1:19244036-19244055 | MS.gene026383:intron | 55.0% | |
| ! | AGTAGGGAGTGTGTGAGGAG+AGG | - | chr1.1:19248106-19248125 | None:intergenic | 55.0% |
| !! | GTGATGGGGGCATCTCATGA+CGG | - | chr1.1:19245227-19245246 | None:intergenic | 55.0% |
| ! | GTGGGAGTAGGGAGTGTGTG+AGG | - | chr1.1:19248111-19248130 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 19242931 | 19248861 | 19242931 | ID=MS.gene026383 |
| chr1.1 | mRNA | 19242931 | 19248861 | 19242931 | ID=MS.gene026383.t1;Parent=MS.gene026383 |
| chr1.1 | exon | 19242931 | 19242993 | 19242931 | ID=MS.gene026383.t1.exon1;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19242931 | 19242993 | 19242931 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19243099 | 19243146 | 19243099 | ID=MS.gene026383.t1.exon2;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19243099 | 19243146 | 19243099 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19243262 | 19243357 | 19243262 | ID=MS.gene026383.t1.exon3;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19243262 | 19243357 | 19243262 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19243464 | 19243541 | 19243464 | ID=MS.gene026383.t1.exon4;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19243464 | 19243541 | 19243464 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19243795 | 19243967 | 19243795 | ID=MS.gene026383.t1.exon5;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19243795 | 19243967 | 19243795 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19244047 | 19244101 | 19244047 | ID=MS.gene026383.t1.exon6;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19244047 | 19244101 | 19244047 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19244289 | 19244337 | 19244289 | ID=MS.gene026383.t1.exon7;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19244289 | 19244337 | 19244289 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19244495 | 19244592 | 19244495 | ID=MS.gene026383.t1.exon8;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19244495 | 19244592 | 19244495 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19245655 | 19245732 | 19245655 | ID=MS.gene026383.t1.exon9;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19245655 | 19245732 | 19245655 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19246852 | 19246977 | 19246852 | ID=MS.gene026383.t1.exon10;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19246852 | 19246977 | 19246852 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| chr1.1 | exon | 19248796 | 19248861 | 19248796 | ID=MS.gene026383.t1.exon11;Parent=MS.gene026383.t1 |
| chr1.1 | CDS | 19248796 | 19248861 | 19248796 | ID=cds.MS.gene026383.t1;Parent=MS.gene026383.t1 |
| Gene Sequence |
| Protein sequence |
