AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02640.t1 MTR_3g089045 91.126 293 9 2 1 277 1 292 0.0 547
MS.gene02640.t1 MTR_4g082040 37.994 329 139 10 11 275 100 427 1.03e-53 180
MS.gene02640.t1 MTR_6g074860 52.809 178 62 5 14 171 2 177 1.80e-52 171
MS.gene02640.t1 MTR_5g041570 67.200 125 24 2 11 118 129 253 1.57e-51 174
MS.gene02640.t1 MTR_7g086960 37.013 308 141 7 1 277 71 356 2.50e-48 164
MS.gene02640.t1 MTR_6g027370 38.408 289 117 11 10 273 93 345 1.00e-40 144
MS.gene02640.t1 MTR_6g027340 40.698 172 83 2 16 171 16 184 8.21e-35 125
MS.gene02640.t1 MTR_6g027360 42.953 149 66 2 16 148 78 223 1.18e-33 124
MS.gene02640.t1 MTR_4g019370 53.465 101 31 1 16 100 38 138 1.51e-31 120
MS.gene02640.t1 MTR_5g016510 49.505 101 35 1 16 100 5 105 1.94e-27 108
MS.gene02640.t1 MTR_3g101290 49.505 101 35 1 16 100 37 137 1.13e-26 104
MS.gene02640.t1 MTR_4g094982 48.515 101 36 1 16 100 5 105 4.97e-26 103
MS.gene02640.t1 MTR_6g015455 45.763 118 41 2 16 117 5 115 7.03e-26 107
MS.gene02640.t1 MTR_5g082910 43.925 107 44 1 4 94 7 113 3.06e-25 102
MS.gene02640.t1 MTR_7g061330 46.535 101 38 1 16 100 113 213 7.33e-24 100
MS.gene02640.t1 MTR_7g461410 46.535 101 38 1 16 100 113 213 7.33e-24 100
MS.gene02640.t1 MTR_7g061330 46.535 101 38 1 16 100 77 177 1.43e-23 100
MS.gene02640.t1 MTR_1g100667 37.931 116 55 1 16 114 15 130 2.46e-22 93.6
MS.gene02640.t1 MTR_3g110028 42.574 101 42 1 16 100 85 185 5.77e-22 95.9
MS.gene02640.t1 MTR_1g026870 42.574 101 42 1 16 100 85 185 1.07e-21 95.1
MS.gene02640.t1 MTR_4g105660 29.520 271 147 9 16 270 180 422 1.10e-21 94.0
MS.gene02640.t1 MTR_6g055910 33.333 132 71 1 16 130 16 147 1.10e-21 92.0
MS.gene02640.t1 MTR_8g060940 42.991 107 44 1 9 98 2 108 1.77e-21 90.9
MS.gene02640.t1 MTR_0008s0390 44.118 102 40 1 16 100 15 116 2.30e-21 91.3
MS.gene02640.t1 MTR_5g049190 44.860 107 40 2 16 106 19 122 2.85e-21 90.1
MS.gene02640.t1 MTR_0008s0470 36.486 148 67 3 16 136 15 162 3.28e-21 90.9
MS.gene02640.t1 MTR_5g070020 34.337 166 79 3 6 149 112 269 5.65e-21 91.3
MS.gene02640.t1 MTR_5g079220 39.815 108 48 1 11 101 18 125 5.84e-21 90.1
MS.gene02640.t1 MTR_2g089450 42.056 107 45 2 10 99 8 114 6.30e-21 89.4
MS.gene02640.t1 MTR_3g074520 41.667 108 46 1 10 100 8 115 6.58e-21 90.9
MS.gene02640.t1 MTR_2g067420 45.098 102 39 1 10 94 10 111 7.60e-21 90.5
MS.gene02640.t1 MTR_3g463400 42.609 115 47 2 13 111 130 241 8.02e-21 91.7
MS.gene02640.t1 MTR_8g017440 37.313 134 60 2 16 132 14 140 1.42e-20 90.1
MS.gene02640.t1 MTR_2g089420 41.667 108 46 2 10 100 7 114 1.67e-20 90.9
MS.gene02640.t1 MTR_0008s0280 40.196 102 44 1 10 94 8 109 1.84e-20 87.8
MS.gene02640.t1 MTR_7g037260 43.363 113 47 2 16 112 145 256 1.97e-20 89.7
MS.gene02640.t1 MTR_2g064160 44.118 102 40 1 16 100 13 114 1.99e-20 89.4
MS.gene02640.t1 MTR_0251s0050 43.137 102 41 1 16 100 15 116 2.09e-20 88.6
MS.gene02640.t1 MTR_4g100720 33.333 141 64 2 16 126 15 155 2.20e-20 86.3
MS.gene02640.t1 MTR_5g078860 40.367 109 48 1 9 100 2 110 2.40e-20 89.0
MS.gene02640.t1 MTR_5g078800 39.450 109 49 1 9 100 2 110 2.64e-20 88.2
MS.gene02640.t1 MTR_7g110830 39.623 106 47 1 16 104 14 119 2.70e-20 89.7
MS.gene02640.t1 MTR_7g115650 42.157 102 42 1 16 100 14 115 2.83e-20 86.7
MS.gene02640.t1 MTR_1g100653 40.952 105 45 1 16 103 14 118 3.21e-20 88.6
MS.gene02640.t1 MTR_5g078910 40.367 109 48 1 9 100 2 110 3.73e-20 88.2
MS.gene02640.t1 MTR_6g055910 38.542 96 59 0 35 130 23 118 3.91e-20 87.4
MS.gene02640.t1 MTR_5g079290 39.091 110 50 1 9 101 12 121 4.06e-20 87.4
MS.gene02640.t1 MTR_3g461490 41.176 102 43 1 16 100 14 115 4.24e-20 88.6
MS.gene02640.t1 MTR_1g076150 38.261 115 54 1 16 113 14 128 4.93e-20 87.0
MS.gene02640.t1 MTR_4g105130 38.679 106 48 1 16 104 14 119 5.61e-20 88.6
MS.gene02640.t1 MTR_7g017260 37.838 111 50 1 9 100 20 130 7.10e-20 87.0
MS.gene02640.t1 MTR_8g098860 41.509 106 45 1 16 104 14 119 7.13e-20 87.8
MS.gene02640.t1 MTR_1g085640 38.679 106 48 1 16 104 14 119 9.81e-20 88.2
MS.gene02640.t1 MTR_7g076740 33.537 164 78 3 10 155 8 158 1.27e-19 87.0
MS.gene02640.t1 MTR_5g078950 39.806 103 45 1 9 94 2 104 1.51e-19 85.9
MS.gene02640.t1 MTR_7g451170 41.593 113 49 2 16 112 191 302 2.02e-19 87.4
MS.gene02640.t1 MTR_5g042030 40.196 102 44 1 16 100 9 110 2.46e-19 85.9
MS.gene02640.t1 MTR_8g017390 31.980 197 94 6 16 172 14 210 2.60e-19 87.4
MS.gene02640.t1 MTR_8g095390 41.176 102 43 1 16 100 14 115 2.71e-19 86.3
MS.gene02640.t1 MTR_5g010020 45.263 95 35 1 16 93 14 108 2.79e-19 86.3
MS.gene02640.t1 MTR_5g010650 45.652 92 34 1 19 94 113 204 2.79e-19 87.4
MS.gene02640.t1 MTR_4g073420 41.176 102 43 1 16 100 14 115 3.24e-19 85.5
MS.gene02640.t1 MTR_8g017540 37.500 120 58 1 16 118 60 179 3.33e-19 86.7
MS.gene02640.t1 MTR_0197s0010 41.414 99 41 1 19 100 6 104 3.44e-19 84.3
MS.gene02640.t1 MTR_5g079670 39.815 108 48 1 10 100 7 114 3.51e-19 84.0
MS.gene02640.t1 MTR_1g085040 37.143 105 49 1 16 103 14 118 3.82e-19 86.3
MS.gene02640.t1 MTR_3g097450 40.196 102 44 1 16 100 14 115 3.86e-19 85.5
MS.gene02640.t1 MTR_8g017340 42.718 103 41 1 16 100 14 116 4.87e-19 86.7
MS.gene02640.t1 MTR_0001s0360 40.196 102 44 1 16 100 9 110 5.68e-19 84.3
MS.gene02640.t1 MTR_4g065017 37.383 107 50 1 16 105 19 125 5.89e-19 85.5
MS.gene02640.t1 MTR_1g043080 39.623 106 47 1 12 100 10 115 7.25e-19 84.0
MS.gene02640.t1 MTR_3g077110 38.679 106 48 1 16 104 14 119 7.92e-19 85.1
MS.gene02640.t1 MTR_5g007370 37.500 112 53 1 6 100 4 115 1.17e-18 84.3
MS.gene02640.t1 MTR_2g099740 42.157 102 42 1 16 100 14 115 1.20e-18 85.1
MS.gene02640.t1 MTR_3g077650 40.351 114 49 2 16 113 181 291 1.21e-18 85.5
MS.gene02640.t1 MTR_2g097910 38.318 107 49 1 16 105 22 128 1.22e-18 84.3
MS.gene02640.t1 MTR_5g029840 39.815 108 48 1 10 100 8 115 1.41e-18 84.3
MS.gene02640.t1 MTR_5g088610 39.062 128 52 5 4 113 2 121 1.55e-18 84.3
MS.gene02640.t1 MTR_8g017500 33.557 149 75 2 16 147 14 155 1.88e-18 84.3
MS.gene02640.t1 MTR_1g112760 37.736 106 49 1 16 104 15 120 2.02e-18 82.4
MS.gene02640.t1 MTR_8g031360 48.315 89 43 2 12 100 32 117 2.17e-18 83.2
MS.gene02640.t1 MTR_5g062790 39.316 117 47 4 4 102 2 112 2.51e-18 83.2
MS.gene02640.t1 MTR_7g111290 40.625 96 40 1 16 94 14 109 2.53e-18 84.3
MS.gene02640.t1 MTR_3g052450 37.838 111 52 1 10 103 36 146 2.59e-18 84.7
MS.gene02640.t1 MTR_2g011660 37.168 113 54 1 5 100 4 116 2.60e-18 84.0
MS.gene02640.t1 MTR_4g091490 38.739 111 51 1 7 100 6 116 2.62e-18 84.0
MS.gene02640.t1 MTR_5g014990 36.667 120 52 2 10 111 8 121 2.80e-18 83.2
MS.gene02640.t1 MTR_4g478180 38.889 108 49 1 10 100 9 116 3.17e-18 83.6
MS.gene02640.t1 MTR_8g027345 36.364 110 53 1 16 108 14 123 3.20e-18 82.8
MS.gene02640.t1 MTR_0063s0090 34.646 127 57 3 10 118 8 126 3.26e-18 81.6
MS.gene02640.t1 MTR_3g052430 39.048 105 47 1 16 103 43 147 3.32e-18 84.3
MS.gene02640.t1 MTR_3g103570 35.780 109 52 1 10 100 8 116 3.49e-18 83.6
MS.gene02640.t1 MTR_4g088015 42.056 107 43 2 16 106 221 324 3.53e-18 84.0
MS.gene02640.t1 MTR_1g021230 37.302 126 57 2 16 124 59 179 4.73e-18 84.0
MS.gene02640.t1 MTR_3g083540 39.216 102 45 1 16 100 43 144 4.98e-18 82.4
MS.gene02640.t1 MTR_8g017350 41.748 103 42 1 16 100 14 116 5.28e-18 84.0
MS.gene02640.t1 MTR_4g057635 36.697 109 51 1 10 100 8 116 6.40e-18 82.4
MS.gene02640.t1 MTR_7g117730 36.697 109 52 1 16 107 14 122 8.38e-18 80.9
MS.gene02640.t1 MTR_4g125520 36.190 105 50 1 16 103 14 118 9.00e-18 81.6
MS.gene02640.t1 MTR_1g017140 35.780 109 52 1 10 100 8 116 1.36e-17 81.6
MS.gene02640.t1 MTR_4g485530 39.216 102 45 1 16 100 14 115 1.51e-17 79.0
MS.gene02640.t1 MTR_3g028740 38.462 104 47 1 16 102 24 127 1.52e-17 81.6
MS.gene02640.t1 MTR_5g079120 35.965 114 56 1 9 105 56 169 1.68e-17 80.9
MS.gene02640.t1 MTR_8g042410 35.772 123 62 1 16 121 39 161 1.72e-17 82.4
MS.gene02640.t1 MTR_8g020490 47.143 70 37 0 35 104 46 115 3.00e-17 79.3
MS.gene02640.t1 MTR_7g010210 36.036 111 54 1 10 103 8 118 3.34e-17 80.5
MS.gene02640.t1 MTR_1g043050 36.111 108 52 1 10 100 8 115 3.86e-17 79.3
MS.gene02640.t1 MTR_7g096930 51.515 66 32 0 35 100 50 115 3.88e-17 79.7
MS.gene02640.t1 MTR_1g083630 35.537 121 57 2 4 107 2 118 4.27e-17 81.3
MS.gene02640.t1 MTR_7g035350 42.391 92 37 1 19 94 228 319 4.29e-17 80.9
MS.gene02640.t1 MTR_4g063100 40.741 108 46 2 16 106 9 115 4.55e-17 79.0
MS.gene02640.t1 MTR_1g017000 36.697 109 51 1 10 100 8 116 5.64e-17 78.6
MS.gene02640.t1 MTR_4g063100 51.389 72 34 1 35 106 16 86 5.92e-17 78.2
MS.gene02640.t1 MTR_4g097570 33.594 128 63 2 10 115 8 135 6.00e-17 79.3
MS.gene02640.t1 MTR_6g009430 37.963 108 50 1 10 100 8 115 6.50e-17 79.7
MS.gene02640.t1 MTR_7g010210 36.036 111 54 1 10 103 8 118 6.76e-17 79.0
MS.gene02640.t1 MTR_2g095520 35.577 104 49 1 10 95 8 111 7.32e-17 79.3
MS.gene02640.t1 MTR_4g097570 33.333 129 63 2 10 115 8 136 7.54e-17 79.0
MS.gene02640.t1 MTR_7g037130 42.708 96 39 1 16 95 145 240 1.26e-16 79.0
MS.gene02640.t1 MTR_0247s0040 38.614 101 45 1 10 93 3 103 1.48e-16 75.9
MS.gene02640.t1 MTR_2g089620 48.571 70 36 0 31 100 46 115 1.66e-16 78.6
MS.gene02640.t1 MTR_0140s0030 39.216 102 45 1 16 100 15 116 1.68e-16 78.6
MS.gene02640.t1 MTR_0489s0020 39.216 102 45 1 16 100 15 116 1.68e-16 78.6
MS.gene02640.t1 MTR_4g128190 37.037 108 60 3 5 107 2 106 2.10e-16 77.0
MS.gene02640.t1 MTR_5g078930 38.095 105 48 1 19 106 14 118 2.12e-16 76.6
MS.gene02640.t1 MTR_6g012180 36.893 103 48 1 10 95 8 110 2.74e-16 77.8
MS.gene02640.t1 MTR_1g062940 36.508 126 61 3 16 122 8 133 2.88e-16 76.3
MS.gene02640.t1 MTR_7g102110 33.945 109 54 1 10 100 8 116 3.07e-16 77.0
MS.gene02640.t1 MTR_4g121460 35.000 120 56 2 16 118 14 128 3.28e-16 77.8
MS.gene02640.t1 MTR_1g110460 34.783 115 58 1 16 113 28 142 3.87e-16 77.4
MS.gene02640.t1 MTR_6g090405 35.780 109 52 1 10 100 8 116 4.85e-16 76.3
MS.gene02640.t1 MTR_6g012690 34.259 108 54 1 10 100 8 115 4.94e-16 77.4
MS.gene02640.t1 MTR_4g082230 35.294 102 49 1 16 100 14 115 5.18e-16 77.8
MS.gene02640.t1 MTR_4g128670 36.538 104 48 1 10 95 8 111 5.88e-16 77.0
MS.gene02640.t1 MTR_5g088080 37.838 111 45 4 10 102 11 115 6.10e-16 76.3
MS.gene02640.t1 MTR_5g088150 37.838 111 45 4 10 102 11 115 6.10e-16 76.3
MS.gene02640.t1 MTR_5g488210 37.838 111 45 4 10 102 11 115 6.10e-16 76.3
MS.gene02640.t1 MTR_4g082290 36.275 102 48 1 16 100 14 115 7.02e-16 77.4
MS.gene02640.t1 MTR_2g096380 38.393 112 61 3 35 146 25 128 7.22e-16 75.1
MS.gene02640.t1 MTR_5g088640 37.838 111 45 4 10 102 11 115 7.40e-16 75.9
MS.gene02640.t1 MTR_7g111290 48.438 64 33 0 31 94 4 67 8.15e-16 76.6
MS.gene02640.t1 MTR_1g086530 35.088 114 57 1 7 103 26 139 8.38e-16 75.9
MS.gene02640.t1 MTR_5g488170 37.838 111 45 4 10 102 11 115 9.75e-16 75.1
MS.gene02640.t1 MTR_7g011170 36.275 102 48 1 16 100 14 115 9.79e-16 76.3
MS.gene02640.t1 MTR_3g011610 37.500 104 48 1 16 102 39 142 1.25e-15 77.0
MS.gene02640.t1 MTR_2g096380 33.784 148 73 4 16 146 8 147 1.38e-15 74.7
MS.gene02640.t1 MTR_7g087130 38.235 102 46 1 16 100 14 115 1.95e-15 75.5
MS.gene02640.t1 MTR_3g045430 46.479 71 36 2 31 100 47 116 2.14e-15 75.1
MS.gene02640.t1 MTR_2g088170 41.346 104 44 1 16 102 31 134 2.57e-15 75.9
MS.gene02640.t1 MTR_1g073170 47.059 68 36 0 35 102 58 125 2.75e-15 73.9
MS.gene02640.t1 MTR_1g057980 35.398 113 55 2 16 112 80 190 2.76e-15 74.7
MS.gene02640.t1 MTR_4g102380 37.037 108 51 1 10 100 8 115 3.13e-15 74.3
MS.gene02640.t1 MTR_3g039990 35.238 105 51 1 16 103 15 119 4.87e-15 73.9
MS.gene02640.t1 MTR_8g006470 40.952 105 44 2 7 93 3 107 5.44e-15 73.6
MS.gene02640.t1 MTR_0193s0090 33.884 121 56 2 10 106 3 123 6.91e-15 72.0
MS.gene02640.t1 MTR_2g034790 35.294 102 49 1 16 100 14 115 9.88e-15 73.6
MS.gene02640.t1 MTR_1g045610 48.529 68 35 0 35 102 59 126 1.04e-14 72.4
MS.gene02640.t1 MTR_7g035075 43.590 78 42 1 31 106 48 125 1.14e-14 71.6
MS.gene02640.t1 MTR_7g450950 37.374 99 46 1 11 93 152 250 1.51e-14 72.8
MS.gene02640.t1 MTR_3g065440 34.513 113 57 1 10 105 8 120 1.57e-14 72.8
MS.gene02640.t1 MTR_5g078140 46.377 69 37 0 35 103 50 118 3.51e-14 71.6
MS.gene02640.t1 MTR_1g086510 37.255 102 59 2 17 117 44 141 4.29e-14 70.9
MS.gene02640.t1 MTR_6g006030 39.535 86 51 1 31 116 48 132 1.29e-13 68.6
MS.gene02640.t1 MTR_1g008970 41.429 70 41 0 21 90 112 181 2.26e-13 68.6
MS.gene02640.t1 MTR_7g061550 37.383 107 48 1 16 103 7 113 4.33e-13 68.9
MS.gene02640.t1 MTR_4g029540 39.048 105 46 2 16 102 12 116 9.26e-13 67.4
MS.gene02640.t1 MTR_7g109320 39.216 102 45 1 16 100 14 115 1.55e-12 67.4
MS.gene02640.t1 MTR_2g033170 36.782 87 55 0 31 117 58 144 7.80e-12 65.1
MS.gene02640.t1 MTR_4g123040 31.008 129 72 1 6 117 16 144 1.44e-11 63.9
MS.gene02640.t1 MTR_6g055910 32.895 76 51 0 55 130 2 77 3.41e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02640.t1 AT1G17950 40.550 291 98 7 14 277 3 245 9.87e-55 177
MS.gene02640.t1 AT4G33450 38.361 305 102 8 1 276 3 250 6.38e-52 170
MS.gene02640.t1 AT1G73410 75.229 109 11 1 14 106 4 112 2.15e-50 166
MS.gene02640.t1 AT1G73410 75.229 109 11 1 14 106 4 112 5.49e-50 164
MS.gene02640.t1 AT5G17800 68.142 113 20 1 10 106 87 199 3.04e-49 166
MS.gene02640.t1 AT1G69560 71.560 109 15 1 13 105 104 212 5.56e-49 165
MS.gene02640.t1 AT1G69560 71.560 109 15 1 13 105 120 228 6.59e-49 165
MS.gene02640.t1 AT1G26780 66.667 114 22 1 16 113 98 211 1.24e-47 160
MS.gene02640.t1 AT1G26780 66.667 114 22 1 16 113 98 211 4.23e-47 161
MS.gene02640.t1 AT3G29020 63.063 111 25 1 11 105 60 170 1.15e-44 151
MS.gene02640.t1 AT3G29020 63.063 111 25 1 11 105 62 172 9.28e-44 151
MS.gene02640.t1 AT5G39700 52.212 113 38 1 9 105 49 161 2.64e-31 115
MS.gene02640.t1 AT5G67300 52.475 101 32 1 16 100 6 106 5.29e-28 109
MS.gene02640.t1 AT2G39880 46.218 119 48 1 5 107 39 157 5.97e-28 110
MS.gene02640.t1 AT3G50060 50.495 101 34 1 16 100 6 106 5.26e-27 107
MS.gene02640.t1 AT3G55730 47.525 101 37 1 16 100 56 156 2.77e-26 106
MS.gene02640.t1 AT3G09230 48.515 101 36 1 16 100 55 155 2.80e-26 106
MS.gene02640.t1 AT3G09370 37.791 172 75 3 16 171 135 290 1.83e-25 105
MS.gene02640.t1 AT3G09370 37.791 172 75 3 16 171 130 285 1.97e-25 105
MS.gene02640.t1 AT4G37260 44.037 109 45 1 16 108 13 121 2.44e-25 102
MS.gene02640.t1 AT3G09370 37.791 172 75 3 16 171 143 298 2.95e-25 105
MS.gene02640.t1 AT2G23290 47.525 101 37 1 16 100 13 113 5.70e-25 101
MS.gene02640.t1 AT5G11510 42.574 101 42 1 16 100 81 181 7.26e-23 98.6
MS.gene02640.t1 AT5G11510 42.574 101 42 1 16 100 81 181 7.26e-23 98.6
MS.gene02640.t1 AT5G11510 42.574 101 42 1 16 100 81 181 7.26e-23 98.6
MS.gene02640.t1 AT5G11510 42.574 101 42 1 16 100 81 181 9.13e-23 98.2
MS.gene02640.t1 AT5G11510 42.574 101 42 1 16 100 81 181 1.01e-22 98.2
MS.gene02640.t1 AT4G25560 37.410 139 52 2 16 119 12 150 1.72e-22 94.4
MS.gene02640.t1 AT3G12720 45.283 106 41 1 16 104 24 129 1.83e-22 94.7
MS.gene02640.t1 AT3G48920 42.857 112 43 2 16 106 20 131 1.97e-22 94.0
MS.gene02640.t1 AT5G14750 42.574 101 53 2 1 100 23 119 2.72e-22 92.0
MS.gene02640.t1 AT2G26950 41.964 112 45 2 12 106 14 122 4.23e-22 94.7
MS.gene02640.t1 AT5G02320 43.564 101 41 1 16 100 127 227 5.03e-22 95.9
MS.gene02640.t1 AT5G02320 43.564 101 41 1 16 100 127 227 5.03e-22 95.9
MS.gene02640.t1 AT5G02320 43.564 101 41 1 16 100 67 167 6.75e-22 95.1
MS.gene02640.t1 AT5G40330 41.584 101 54 2 1 100 19 115 9.99e-22 90.9
MS.gene02640.t1 AT1G18570 42.157 102 42 1 16 100 15 116 1.33e-21 93.2
MS.gene02640.t1 AT5G65230 40.179 112 50 1 6 100 4 115 8.78e-21 90.1
MS.gene02640.t1 AT4G32730 41.584 101 43 1 16 100 87 187 9.67e-21 92.4
MS.gene02640.t1 AT4G32730 41.584 101 43 1 16 100 87 187 9.67e-21 92.4
MS.gene02640.t1 AT4G32730 41.584 101 43 1 16 100 87 187 9.67e-21 92.4
MS.gene02640.t1 AT4G32730 41.584 101 43 1 16 100 87 187 9.67e-21 92.4
MS.gene02640.t1 AT4G32730 41.584 101 43 1 16 100 87 187 1.06e-20 92.0
MS.gene02640.t1 AT5G58850 41.129 124 54 2 4 111 93 213 1.17e-20 91.3
MS.gene02640.t1 AT5G14750 53.030 66 31 0 35 100 20 85 1.28e-20 86.7
MS.gene02640.t1 AT1G79180 40.741 108 47 1 10 100 10 117 1.35e-20 89.4
MS.gene02640.t1 AT3G23250 44.118 102 40 2 16 100 14 115 1.45e-20 89.4
MS.gene02640.t1 AT5G10280 40.179 112 50 1 6 100 4 115 1.51e-20 90.1
MS.gene02640.t1 AT5G11050 43.307 127 52 3 12 122 101 223 1.74e-20 90.9
MS.gene02640.t1 AT3G27920 53.030 66 31 0 35 100 52 117 1.82e-20 87.8
MS.gene02640.t1 AT5G54230 42.157 102 42 1 16 100 14 115 2.64e-20 89.0
MS.gene02640.t1 AT3G53200 40.566 106 46 1 16 104 11 116 3.59e-20 87.0
MS.gene02640.t1 AT4G38620 42.157 102 42 1 16 100 14 115 4.94e-20 87.8
MS.gene02640.t1 AT4G00540 42.056 107 43 1 13 100 100 206 5.57e-20 89.0
MS.gene02640.t1 AT3G27785 33.333 156 84 3 13 152 186 337 6.44e-20 89.4
MS.gene02640.t1 AT3G13890 36.913 149 69 4 16 141 14 160 7.03e-20 88.6
MS.gene02640.t1 AT1G74080 44.211 95 36 1 16 93 14 108 8.76e-20 87.8
MS.gene02640.t1 AT4G00540 42.056 107 43 1 13 100 98 204 1.05e-19 88.6
MS.gene02640.t1 AT3G53200 47.436 78 41 0 27 104 6 83 1.70e-19 84.7
MS.gene02640.t1 AT1G63910 41.905 105 44 1 16 103 14 118 1.77e-19 87.4
MS.gene02640.t1 AT4G01680 39.423 104 46 1 16 102 14 117 1.81e-19 85.5
MS.gene02640.t1 AT4G01680 39.423 104 46 1 16 102 14 117 2.35e-19 86.7
MS.gene02640.t1 AT5G23000 38.532 109 49 1 10 100 8 116 2.52e-19 86.7
MS.gene02640.t1 AT4G05100 38.938 113 52 1 5 100 4 116 2.69e-19 86.3
MS.gene02640.t1 AT4G26930 41.905 105 44 1 16 103 21 125 2.77e-19 87.0
MS.gene02640.t1 AT2G26960 40.000 120 53 2 2 102 6 125 2.92e-19 87.4
MS.gene02640.t1 AT1G74430 38.889 108 49 1 10 100 8 115 3.71e-19 85.1
MS.gene02640.t1 AT1G22640 52.857 70 33 0 31 100 46 115 3.71e-19 84.7
MS.gene02640.t1 AT5G60890 39.252 107 48 2 16 105 14 120 4.35e-19 85.5
MS.gene02640.t1 AT5G61420 38.679 106 48 1 16 104 14 119 7.02e-19 85.5
MS.gene02640.t1 AT2G16720 40.196 102 44 1 16 100 14 115 7.21e-19 84.3
MS.gene02640.t1 AT5G52600 36.066 122 56 2 16 115 14 135 9.37e-19 82.4
MS.gene02640.t1 AT3G02940 39.815 108 48 1 10 100 8 115 9.48e-19 84.7
MS.gene02640.t1 AT5G12870 34.746 118 60 1 5 105 9 126 9.85e-19 84.0
MS.gene02640.t1 AT1G66370 37.719 114 54 1 8 104 2 115 1.00e-18 83.6
MS.gene02640.t1 AT5G16770 39.815 108 48 1 10 100 8 115 1.02e-18 84.7
MS.gene02640.t1 AT5G16770 39.815 108 48 1 10 100 8 115 1.02e-18 84.7
MS.gene02640.t1 AT5G40360 38.318 107 50 1 16 106 158 264 1.04e-18 85.1
MS.gene02640.t1 AT3G13540 39.252 107 48 1 16 105 25 131 1.05e-18 83.6
MS.gene02640.t1 AT3G61250 41.176 102 43 1 16 100 14 115 1.07e-18 84.3
MS.gene02640.t1 AT2G32460 36.441 118 58 1 2 102 6 123 1.11e-18 85.9
MS.gene02640.t1 AT4G17785 38.053 113 53 1 5 100 4 116 1.22e-18 84.7
MS.gene02640.t1 AT4G17785 38.053 113 53 1 5 100 4 116 1.26e-18 84.7
MS.gene02640.t1 AT1G35515 39.216 102 45 1 16 100 14 115 1.33e-18 82.4
MS.gene02640.t1 AT3G02940 42.593 108 45 2 10 100 8 115 1.39e-18 84.3
MS.gene02640.t1 AT3G02940 42.593 108 45 2 10 100 8 115 1.39e-18 84.3
MS.gene02640.t1 AT3G13890 34.810 158 69 4 16 141 14 169 1.49e-18 84.7
MS.gene02640.t1 AT4G09460 38.235 102 46 1 16 100 14 115 1.52e-18 82.8
MS.gene02640.t1 AT2G31180 40.196 102 44 1 16 100 14 115 1.63e-18 82.8
MS.gene02640.t1 AT5G16770 39.815 108 48 1 10 100 8 115 1.67e-18 84.3
MS.gene02640.t1 AT5G16770 39.815 108 48 1 10 100 8 115 1.67e-18 84.3
MS.gene02640.t1 AT5G52260 42.157 102 42 1 16 100 14 115 1.77e-18 83.2
MS.gene02640.t1 AT3G30210 38.739 111 51 1 13 106 26 136 1.79e-18 83.2
MS.gene02640.t1 AT1G57560 39.216 102 45 1 16 100 14 115 1.82e-18 84.0
MS.gene02640.t1 AT1G57560 39.216 102 45 1 16 100 14 115 2.36e-18 82.8
MS.gene02640.t1 AT1G18710 37.037 108 51 1 10 100 8 115 2.64e-18 82.8
MS.gene02640.t1 AT4G18770 42.991 107 42 2 16 106 217 320 2.71e-18 84.3
MS.gene02640.t1 AT4G28110 40.741 108 47 2 10 100 8 115 2.84e-18 82.8
MS.gene02640.t1 AT1G34670 39.815 108 48 1 10 100 8 115 3.81e-18 83.6
MS.gene02640.t1 AT5G56110 38.889 108 49 1 10 100 8 115 3.97e-18 83.2
MS.gene02640.t1 AT5G57620 36.697 109 51 1 10 100 8 116 4.02e-18 83.2
MS.gene02640.t1 AT5G06100 37.273 110 52 1 10 102 28 137 4.05e-18 84.3
MS.gene02640.t1 AT5G06100 37.273 110 52 1 10 102 28 137 4.05e-18 84.3
MS.gene02640.t1 AT5G06100 37.273 110 52 1 10 102 28 137 4.05e-18 84.3
MS.gene02640.t1 AT5G06100 37.273 110 52 1 10 102 28 137 4.05e-18 84.3
MS.gene02640.t1 AT5G06100 37.273 110 52 1 10 102 28 137 4.08e-18 84.0
MS.gene02640.t1 AT4G34990 40.196 102 44 1 16 100 14 115 4.20e-18 82.4
MS.gene02640.t1 AT5G26660 38.462 104 47 1 16 102 14 117 5.12e-18 83.2
MS.gene02640.t1 AT3G01140 37.037 108 51 1 10 100 8 115 5.42e-18 82.8
MS.gene02640.t1 AT1G09540 37.736 106 49 1 16 104 14 119 6.30e-18 82.8
MS.gene02640.t1 AT3G12820 36.752 117 57 1 1 100 1 117 6.41e-18 81.3
MS.gene02640.t1 AT3G01140 37.037 108 51 1 10 100 51 158 7.23e-18 82.8
MS.gene02640.t1 AT5G07690 38.614 101 45 1 16 99 14 114 7.84e-18 82.4
MS.gene02640.t1 AT3G11440 38.462 104 47 1 16 102 43 146 8.58e-18 83.2
MS.gene02640.t1 AT3G11440 38.462 104 47 1 16 102 43 146 8.65e-18 83.2
MS.gene02640.t1 AT3G11440 38.462 104 47 1 16 102 43 146 8.65e-18 83.2
MS.gene02640.t1 AT3G11440 38.462 104 47 1 16 102 43 146 8.65e-18 83.2
MS.gene02640.t1 AT3G46130 45.679 81 44 0 26 106 16 96 8.95e-18 80.5
MS.gene02640.t1 AT3G47600 36.207 116 57 1 10 108 8 123 9.37e-18 82.0
MS.gene02640.t1 AT4G01680 35.345 116 46 1 16 102 14 129 1.09e-17 82.0
MS.gene02640.t1 AT1G79180 50.704 71 35 0 35 105 85 155 1.18e-17 81.6
MS.gene02640.t1 AT3G49690 36.697 109 51 1 10 100 8 116 1.25e-17 81.6
MS.gene02640.t1 AT5G07700 39.216 102 45 1 16 100 14 115 1.32e-17 81.6
MS.gene02640.t1 AT5G07700 39.216 102 45 1 16 100 14 115 1.32e-17 81.6
MS.gene02640.t1 AT2G32460 39.423 104 46 1 16 102 8 111 1.49e-17 82.4
MS.gene02640.t1 AT1G16490 39.130 115 53 2 10 107 10 124 1.79e-17 80.5
MS.gene02640.t1 AT4G21440 40.196 102 44 1 16 100 14 115 2.13e-17 81.3
MS.gene02640.t1 AT3G12820 51.515 66 32 0 35 100 4 69 2.55e-17 78.6
MS.gene02640.t1 AT5G59780 45.000 80 44 0 27 106 17 96 2.82e-17 79.0
MS.gene02640.t1 AT2G25230 36.111 108 50 2 18 109 28 132 3.32e-17 79.0
MS.gene02640.t1 AT1G06180 42.000 100 53 3 16 113 32 128 3.64e-17 79.3
MS.gene02640.t1 AT1G56160 36.111 108 52 1 10 100 10 117 3.77e-17 80.1
MS.gene02640.t1 AT5G14340 38.462 104 47 1 16 102 26 129 4.77e-17 79.3
MS.gene02640.t1 AT5G49330 39.216 102 45 1 16 100 14 115 5.04e-17 80.1
MS.gene02640.t1 AT3G46130 48.611 72 37 0 35 106 15 86 5.14e-17 78.2
MS.gene02640.t1 AT5G65790 33.600 125 61 2 10 116 8 128 5.18e-17 80.5
MS.gene02640.t1 AT5G15310 36.111 108 52 1 10 100 8 115 5.38e-17 79.7
MS.gene02640.t1 AT5G35550 42.105 95 38 1 16 93 16 110 6.02e-17 79.0
MS.gene02640.t1 AT5G15310 36.111 108 52 1 10 100 8 115 6.36e-17 79.7
MS.gene02640.t1 AT5G59780 48.611 72 37 0 35 106 46 117 7.55e-17 78.2
MS.gene02640.t1 AT3G08500 37.500 104 48 1 16 102 32 135 9.11e-17 79.3
MS.gene02640.t1 AT3G46130 48.611 72 37 0 35 106 47 118 1.18e-16 77.8
MS.gene02640.t1 AT5G55020 39.048 105 47 1 16 103 28 132 1.67e-16 79.3
MS.gene02640.t1 AT3G28470 39.604 101 44 1 10 93 8 108 1.71e-16 78.6
MS.gene02640.t1 AT5G35550 51.562 64 31 0 31 94 51 114 1.72e-16 77.4
MS.gene02640.t1 AT5G15310 36.111 108 52 1 10 100 8 115 1.80e-16 77.4
MS.gene02640.t1 AT1G66380 39.831 118 48 2 1 101 1 112 1.86e-16 74.7
MS.gene02640.t1 AT1G56650 35.507 138 71 2 11 130 5 142 2.15e-16 77.0
MS.gene02640.t1 AT5G62470 37.500 104 49 1 16 103 14 117 2.68e-16 78.2
MS.gene02640.t1 AT1G74650 38.235 102 46 1 16 100 14 115 2.87e-16 77.8
MS.gene02640.t1 AT3G28910 37.037 108 51 1 10 100 8 115 3.73e-16 77.4
MS.gene02640.t1 AT5G62470 37.143 105 49 1 16 103 14 118 4.33e-16 77.4
MS.gene02640.t1 AT2G47460 39.216 102 45 1 16 100 14 115 5.97e-16 77.4
MS.gene02640.t1 AT5G16600 36.036 111 54 1 10 103 8 118 8.24e-16 76.6
MS.gene02640.t1 AT2G36890 36.697 109 51 1 10 100 8 116 8.67e-16 76.3
MS.gene02640.t1 AT2G36890 36.697 109 51 1 10 100 49 157 9.97e-16 76.3
MS.gene02640.t1 AT5G26660 44.444 72 40 0 31 102 15 86 1.01e-15 76.3
MS.gene02640.t1 AT1G25340 40.230 87 52 0 30 116 46 132 1.05e-15 75.5
MS.gene02640.t1 AT3G47600 46.575 73 39 0 36 108 45 117 1.34e-15 75.9
MS.gene02640.t1 AT4G12350 36.275 102 48 1 16 100 14 115 1.61e-15 75.1
MS.gene02640.t1 AT1G25340 40.230 87 52 0 30 116 46 132 1.65e-15 75.5
MS.gene02640.t1 AT1G25340 39.535 86 52 0 31 116 52 137 2.07e-15 74.7
MS.gene02640.t1 AT1G08810 37.037 108 51 1 10 100 8 115 2.08e-15 74.7
MS.gene02640.t1 AT1G68320 43.836 73 41 0 31 103 53 125 3.10e-15 74.3
MS.gene02640.t1 AT4G37780 33.028 109 55 1 10 100 8 116 3.21e-15 74.7
MS.gene02640.t1 AT3G01530 43.421 76 43 0 31 106 59 134 3.78e-15 72.8
MS.gene02640.t1 AT2G47190 38.202 89 55 0 31 119 54 142 4.08e-15 73.9
MS.gene02640.t1 AT4G22680 36.111 108 52 1 10 100 8 115 4.48e-15 73.6
MS.gene02640.t1 AT4G13480 39.785 93 48 1 31 115 40 132 5.60e-15 73.2
MS.gene02640.t1 AT5G62320 51.515 66 32 0 35 100 58 123 1.16e-14 72.0
MS.gene02640.t1 AT1G66390 37.963 108 50 1 11 101 5 112 1.31e-14 72.0
MS.gene02640.t1 AT5G40350 50.847 59 29 0 35 93 10 68 1.61e-14 70.1
MS.gene02640.t1 AT1G66230 34.513 113 57 1 10 105 8 120 1.69e-14 72.4
MS.gene02640.t1 AT3G24310 45.833 72 39 0 31 102 52 123 1.80e-14 72.0
MS.gene02640.t1 AT3G27810 47.619 63 33 0 31 93 5 67 2.37e-14 70.1
MS.gene02640.t1 AT1G71030 44.118 68 38 0 33 100 2 69 3.16e-14 69.7
MS.gene02640.t1 AT1G71030 44.118 68 38 0 33 100 16 83 4.14e-14 69.7
MS.gene02640.t1 AT3G62610 36.275 102 48 1 16 100 14 115 4.63e-14 71.6
MS.gene02640.t1 AT5G40350 50.847 59 29 0 35 93 55 113 4.77e-14 70.1
MS.gene02640.t1 AT5G14750 46.552 58 31 0 43 100 1 58 6.71e-14 67.8
MS.gene02640.t1 AT5G14750 46.552 58 31 0 43 100 1 58 6.71e-14 67.8
MS.gene02640.t1 AT3G27810 47.619 63 33 0 31 93 54 116 7.81e-14 69.7
MS.gene02640.t1 AT1G66380 47.368 76 40 0 36 111 14 89 1.27e-13 66.2
MS.gene02640.t1 AT3G06490 35.714 112 55 1 9 103 14 125 1.44e-13 70.1
MS.gene02640.t1 AT3G60460 40.625 96 39 2 16 93 13 108 1.63e-13 69.7
MS.gene02640.t1 AT1G48000 38.947 95 41 1 16 93 34 128 3.51e-13 68.2
MS.gene02640.t1 AT1G22640 50.000 58 29 0 43 100 1 58 8.70e-13 66.2
MS.gene02640.t1 AT5G40430 24.615 195 115 4 2 170 40 228 9.31e-13 67.0
MS.gene02640.t1 AT3G23250 46.552 58 31 0 43 100 1 58 9.36e-13 66.6
MS.gene02640.t1 AT5G49620 28.902 173 93 3 6 161 18 177 2.41e-12 66.2
MS.gene02640.t1 AT2G02820 30.645 124 70 1 19 126 33 156 1.63e-11 64.7
MS.gene02640.t1 AT2G02820 30.645 124 70 1 19 126 33 156 1.67e-11 63.9
MS.gene02640.t1 AT2G02820 30.645 124 70 1 19 126 33 156 1.84e-11 64.3

Find 47 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGCAACCCTCTTGTAATT+TGG 0.255085 3.1:+72204006 None:intergenic
AAAGGTCTTCTGTTAATTCT+TGG 0.287343 3.1:+72204471 None:intergenic
TTTCTTGTGATGCAATTATC+AGG 0.303432 3.1:+72204105 None:intergenic
TTCCCTTACACAACGAGAAT+TGG 0.308544 3.1:-72204240 MS.gene02640:CDS
CGTCAACTTGTTGAACAATA+TGG 0.317875 3.1:-72205149 MS.gene02640:intron
CTTCTAGTTCTCTTGCCTCT+TGG 0.331265 3.1:-72204185 MS.gene02640:CDS
GAATCATTGGCATGTTATAA+TGG 0.349760 3.1:-72204343 MS.gene02640:CDS
AAAGGATCTAATATTTATAA+AGG 0.368916 3.1:-72204084 MS.gene02640:CDS
ACTTCTCTTGCCACATAACT+TGG 0.368979 3.1:+72204299 None:intergenic
AATTGGCAGGGAAAAGTTGT+AGG 0.376520 3.1:-72204518 MS.gene02640:intron
TGGAAGGATAAAGAAGGATT+TGG 0.388713 3.1:-72203950 MS.gene02640:CDS
ATCGGATTCACGGGAACAAA+TGG 0.391338 3.1:-72204413 MS.gene02640:CDS
TATCCAATTCTCGTTGTGTA+AGG 0.414572 3.1:+72204237 None:intergenic
AGTGACGAGAATGCTTGATT+TGG 0.421130 3.1:+72204030 None:intergenic
GATAATTGCATCACAAGAAA+AGG 0.455907 3.1:-72204102 MS.gene02640:CDS
TCTTCTTCCTCTTCAGTGAA+AGG 0.457342 3.1:+72204453 None:intergenic
CAGGGAAAAGTTGTAGGTTG+AGG 0.483082 3.1:-72204512 MS.gene02640:CDS
GTAAGGGAAATTAAGTATAG+AGG 0.483574 3.1:+72204254 None:intergenic
CAGAAGACCTTTCACTGAAG+AGG 0.493817 3.1:-72204460 MS.gene02640:CDS
TTGCGGCTCATCGGATTCAC+GGG 0.496141 3.1:-72204422 MS.gene02640:CDS
AGAGTTGTCCACGTGGTCAC+TGG 0.498220 3.1:-72205196 MS.gene02640:CDS
ATAATGCTGTGAAGAATCAT+TGG 0.498884 3.1:-72204356 MS.gene02640:CDS
CTTGCGGCTCATCGGATTCA+CGG 0.514410 3.1:-72204423 MS.gene02640:CDS
ACGAGAATTGGATATGAGAA+TGG 0.514578 3.1:-72204228 MS.gene02640:CDS
TCGGATTCACGGGAACAAAT+GGG 0.515800 3.1:-72204412 MS.gene02640:CDS
TAAATTCTTCTGATGATGGA+AGG 0.520438 3.1:-72203966 MS.gene02640:CDS
CAAGAGGCAAGAGAACTAGA+AGG 0.520571 3.1:+72204186 None:intergenic
GTGACCACGTGGACAACTCT+TGG 0.531230 3.1:+72205199 None:intergenic
TATAATGGCTAGAAAACAAA+GGG 0.536500 3.1:-72204328 MS.gene02640:CDS
GCGATCTTGCTCTTTGTCCG+TGG 0.543861 3.1:+72203876 None:intergenic
ACAGCATTATCAGTTCTACC+AGG 0.552201 3.1:+72204369 None:intergenic
AGAGACTACTTGCGGCTCAT+CGG 0.552562 3.1:-72204431 MS.gene02640:CDS
TGATGATGGAAGGATAAAGA+AGG 0.563335 3.1:-72203956 MS.gene02640:CDS
CACAAACTTAAAGTCTTCCA+CGG 0.571039 3.1:-72203893 MS.gene02640:CDS
GGAAAAGTTGTAGGTTGAGG+TGG 0.578152 3.1:-72204509 MS.gene02640:CDS
ATCCAATTCTCGTTGTGTAA+GGG 0.578227 3.1:+72204238 None:intergenic
CGTCACTTCCAAATTACAAG+AGG 0.581461 3.1:-72204014 MS.gene02640:CDS
AGGGAACAATCCAAGTTATG+TGG 0.586173 3.1:-72204309 MS.gene02640:CDS
ACACCAAGAAAATCAATGAA+AGG 0.589466 3.1:+72203820 None:intergenic
TTATAATGGCTAGAAAACAA+AGG 0.628974 3.1:-72204329 MS.gene02640:CDS
CAGCATTATCAGTTCTACCA+GGG 0.636613 3.1:+72204370 None:intergenic
GTCACTTCCAAATTACAAGA+GGG 0.637525 3.1:-72204013 MS.gene02640:CDS
CATAGAAGCAAAATTCCAAG+AGG 0.652007 3.1:+72204170 None:intergenic
GGAAGAAGAGAGACTACTTG+CGG 0.656523 3.1:-72204439 MS.gene02640:CDS
GCGGGTCGCCAGTGACCACG+TGG 0.707521 3.1:+72205188 None:intergenic
CAAAGAGCAAGATCGCGATG+AGG 0.718817 3.1:-72203869 MS.gene02640:CDS
GATACCAAGAGTTGTCCACG+TGG 0.762573 3.1:-72205203 MS.gene02640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTCCTTTTAAT+TGG - chr3.1:72204496-72204515 MS.gene02640:CDS 10.0%
!! AAAGGATCTAATATTTATAA+AGG - chr3.1:72204947-72204966 MS.gene02640:intron 15.0%
!! ATGAATTTGAAAATTAAACA+AGG + chr3.1:72204012-72204031 None:intergenic 15.0%
!! TTTAAAAAACCAAAAACATT+TGG + chr3.1:72205049-72205068 None:intergenic 15.0%
!!! TCAACCAATAAAATTTTAAT+TGG - chr3.1:72204387-72204406 MS.gene02640:CDS 15.0%
!! AATTTGAAAATTAAACAAGG+AGG + chr3.1:72204009-72204028 None:intergenic 20.0%
!! TACATGAGATAATTAATAGA+TGG + chr3.1:72204436-72204455 None:intergenic 20.0%
!! TTCAAATTCATAGTGAAATT+GGG - chr3.1:72204021-72204040 MS.gene02640:CDS 20.0%
!! TTTCAAATTCATAGTGAAAT+TGG - chr3.1:72204020-72204039 MS.gene02640:CDS 20.0%
!!! CGTACCAATTAAAATTTTAT+TGG + chr3.1:72204394-72204413 None:intergenic 20.0%
!!! TTTGGAATTTTTGGTTATTT+TGG - chr3.1:72204295-72204314 MS.gene02640:CDS 20.0%
!!! TTTTTAAATTCTTCTGATGA+TGG - chr3.1:72205061-72205080 MS.gene02640:intron 20.0%
! TATAATGGCTAGAAAACAAA+GGG - chr3.1:72204703-72204722 MS.gene02640:intron 25.0%
! TTATAATGGCTAGAAAACAA+AGG - chr3.1:72204702-72204721 MS.gene02640:intron 25.0%
!!! GTTATTTTGGTTTTCTCTAT+TGG - chr3.1:72204308-72204327 MS.gene02640:CDS 25.0%
!!! TTTTTTCCTTTTAATTGGCA+GGG - chr3.1:72204501-72204520 MS.gene02640:CDS 25.0%
!!! TTTTTTTCCTTTTAATTGGC+AGG - chr3.1:72204500-72204519 MS.gene02640:CDS 25.0%
AAAGGTCTTCTGTTAATTCT+TGG + chr3.1:72204563-72204582 None:intergenic 30.0%
ACACCAAGAAAATCAATGAA+AGG + chr3.1:72205214-72205233 None:intergenic 30.0%
AGCAATTGAATTCCAATTCT+GGG + chr3.1:72203910-72203929 None:intergenic 30.0%
ATAATGCTGTGAAGAATCAT+TGG - chr3.1:72204675-72204694 MS.gene02640:intron 30.0%
ATGTTAAGAAGAAGGATATC+AGG - chr3.1:72204098-72204117 MS.gene02640:CDS 30.0%
GAATCATTGGCATGTTATAA+TGG - chr3.1:72204688-72204707 MS.gene02640:intron 30.0%
GATAATTGCATCACAAGAAA+AGG - chr3.1:72204929-72204948 MS.gene02640:intron 30.0%
GGTATTTATGTTAGTGAGAA+TGG - chr3.1:72204133-72204152 MS.gene02640:CDS 30.0%
GTAAGGGAAATTAAGTATAG+AGG + chr3.1:72204780-72204799 None:intergenic 30.0%
TGATATCCTTCTTCTTAACA+TGG + chr3.1:72204099-72204118 None:intergenic 30.0%
TTATGTTAGTGAGAATGGAT+CGG - chr3.1:72204138-72204157 MS.gene02640:CDS 30.0%
TTTCTTGTGATGCAATTATC+AGG + chr3.1:72204929-72204948 None:intergenic 30.0%
! ATTCAAGTTTCTGTTGTTCT+TGG - chr3.1:72204217-72204236 MS.gene02640:CDS 30.0%
! TTACATTTGCTTGTTGAGTT+TGG - chr3.1:72204277-72204296 MS.gene02640:CDS 30.0%
!! CTTGTTGAGTTTGGAATTTT+TGG - chr3.1:72204286-72204305 MS.gene02640:CDS 30.0%
!! TAAATTCTTCTGATGATGGA+AGG - chr3.1:72205065-72205084 MS.gene02640:intron 30.0%
!!! GTTCCTTTCATTGATTTTCT+TGG - chr3.1:72205208-72205227 MS.gene02640:CDS 30.0%
!!! TTCATTGATTTTCTTGGTGT+TGG - chr3.1:72205214-72205233 MS.gene02640:CDS 30.0%
AATACATACCTGATCTTCCT+TGG + chr3.1:72203941-72203960 None:intergenic 35.0%
ACGAGAATTGGATATGAGAA+TGG - chr3.1:72204803-72204822 MS.gene02640:intron 35.0%
AGTTTCTGTTGTTCTTGGAT+TGG - chr3.1:72204222-72204241 MS.gene02640:CDS 35.0%
ATCCAATTCTCGTTGTGTAA+GGG + chr3.1:72204796-72204815 None:intergenic 35.0%
CACAAACTTAAAGTCTTCCA+CGG - chr3.1:72205138-72205157 MS.gene02640:intron 35.0%
CAGCAATTGAATTCCAATTC+TGG + chr3.1:72203911-72203930 None:intergenic 35.0%
CATAGAAGCAAAATTCCAAG+AGG + chr3.1:72204864-72204883 None:intergenic 35.0%
GAAATGCCATGTTAAGAAGA+AGG - chr3.1:72204090-72204109 MS.gene02640:CDS 35.0%
GATATCAGGAAGTTTCTTGA+TGG - chr3.1:72204112-72204131 MS.gene02640:CDS 35.0%
GTCACTTCCAAATTACAAGA+GGG - chr3.1:72205018-72205037 MS.gene02640:intron 35.0%
TATCCAATTCTCGTTGTGTA+AGG + chr3.1:72204797-72204816 None:intergenic 35.0%
TCAATTGCTGAAAAACTCCA+AGG - chr3.1:72203921-72203940 MS.gene02640:CDS 35.0%
TCTTCTTAACATGGCATTTC+TGG + chr3.1:72204090-72204109 None:intergenic 35.0%
TGGAAGGATAAAGAAGGATT+TGG - chr3.1:72205081-72205100 MS.gene02640:intron 35.0%
! ACGAAGTTTTTCATCTTCAG+CGG + chr3.1:72203865-72203884 None:intergenic 35.0%
! ACTTTTCCCTGCCAATTAAA+AGG + chr3.1:72204510-72204529 None:intergenic 35.0%
!! CGTCAACTTGTTGAACAATA+TGG - chr3.1:72203882-72203901 MS.gene02640:CDS 35.0%
!! TGATGATGGAAGGATAAAGA+AGG - chr3.1:72205075-72205094 MS.gene02640:intron 35.0%
!!! TTGGATTGGTTACTGTTTTG+TGG - chr3.1:72204236-72204255 MS.gene02640:CDS 35.0%
AACAATATGGTGCCCAGAAT+TGG - chr3.1:72203895-72203914 MS.gene02640:CDS 40.0%
AATTGGCAGGGAAAAGTTGT+AGG - chr3.1:72204513-72204532 MS.gene02640:intron 40.0%
ACAGCATTATCAGTTCTACC+AGG + chr3.1:72204665-72204684 None:intergenic 40.0%
ACTTCTCTTGCCACATAACT+TGG + chr3.1:72204735-72204754 None:intergenic 40.0%
AGGGAACAATCCAAGTTATG+TGG - chr3.1:72204722-72204741 MS.gene02640:intron 40.0%
AGTGACGAGAATGCTTGATT+TGG + chr3.1:72205004-72205023 None:intergenic 40.0%
CAGCATTATCAGTTCTACCA+GGG + chr3.1:72204664-72204683 None:intergenic 40.0%
CGTCACTTCCAAATTACAAG+AGG - chr3.1:72205017-72205036 MS.gene02640:intron 40.0%
GAAAAACTCCAAGGAAGATC+AGG - chr3.1:72203930-72203949 MS.gene02640:CDS 40.0%
TCTTCTTCCTCTTCAGTGAA+AGG + chr3.1:72204581-72204600 None:intergenic 40.0%
TTCCCTTACACAACGAGAAT+TGG - chr3.1:72204791-72204810 MS.gene02640:intron 40.0%
! AGGGTTGCTCCAAATGTTTT+TGG - chr3.1:72205037-72205056 MS.gene02640:intron 40.0%
! CGAAGTTTTTCATCTTCAGC+GGG + chr3.1:72203864-72203883 None:intergenic 40.0%
! CTAATAGCAAGACTTTTCCC+TGG - chr3.1:72204644-72204663 MS.gene02640:intron 40.0%
ATCGGATTCACGGGAACAAA+TGG - chr3.1:72204618-72204637 MS.gene02640:intron 45.0%
CAAGAGGCAAGAGAACTAGA+AGG + chr3.1:72204848-72204867 None:intergenic 45.0%
CAGAAGACCTTTCACTGAAG+AGG - chr3.1:72204571-72204590 MS.gene02640:intron 45.0%
CAGGGAAAAGTTGTAGGTTG+AGG - chr3.1:72204519-72204538 MS.gene02640:intron 45.0%
GGAAGAAGAGAGACTACTTG+CGG - chr3.1:72204592-72204611 MS.gene02640:intron 45.0%
GGAGCAACCCTCTTGTAATT+TGG + chr3.1:72205028-72205047 None:intergenic 45.0%
TCGGATTCACGGGAACAAAT+GGG - chr3.1:72204619-72204638 MS.gene02640:intron 45.0%
TGTTAGTGAGAATGGATCGG+TGG - chr3.1:72204141-72204160 MS.gene02640:CDS 45.0%
! GGAAAAGTTGTAGGTTGAGG+TGG - chr3.1:72204522-72204541 MS.gene02640:intron 45.0%
!! CTTCTAGTTCTCTTGCCTCT+TGG - chr3.1:72204846-72204865 MS.gene02640:intron 45.0%
AGAGACTACTTGCGGCTCAT+CGG - chr3.1:72204600-72204619 MS.gene02640:intron 50.0%
CAAAGAGCAAGATCGCGATG+AGG - chr3.1:72205162-72205181 MS.gene02640:CDS 50.0%
GATACCAAGAGTTGTCCACG+TGG - chr3.1:72203828-72203847 MS.gene02640:CDS 50.0%
AGAGTTGTCCACGTGGTCAC+TGG - chr3.1:72203835-72203854 MS.gene02640:CDS 55.0%
CTTGCGGCTCATCGGATTCA+CGG - chr3.1:72204608-72204627 MS.gene02640:intron 55.0%
GCGATCTTGCTCTTTGTCCG+TGG + chr3.1:72205158-72205177 None:intergenic 55.0%
GTGACCACGTGGACAACTCT+TGG + chr3.1:72203835-72203854 None:intergenic 55.0%
TTGCGGCTCATCGGATTCAC+GGG - chr3.1:72204609-72204628 MS.gene02640:intron 55.0%
GCGGGTCGCCAGTGACCACG+TGG + chr3.1:72203846-72203865 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 72203801 72205252 72203801 ID=MS.gene02640
chr3.1 mRNA 72203801 72205252 72203801 ID=MS.gene02640.t1;Parent=MS.gene02640
chr3.1 exon 72205150 72205252 72205150 ID=MS.gene02640.t1.exon1;Parent=MS.gene02640.t1
chr3.1 CDS 72205150 72205252 72205150 ID=cds.MS.gene02640.t1;Parent=MS.gene02640.t1
chr3.1 exon 72203801 72204531 72203801 ID=MS.gene02640.t1.exon2;Parent=MS.gene02640.t1
chr3.1 CDS 72203801 72204531 72203801 ID=cds.MS.gene02640.t1;Parent=MS.gene02640.t1
Gene Sequence

>MS.gene02640

ATGGAGGATTCTTCTTCTGCAGCTGAAGATACCAAGAGTTGTCCACGTGGTCACTGGCGACCCGCTGAAGATGAAAAACTTCGTCAACTTGTTGAACAATATGGTGCCCAGAATTGGAATTCAATTGCTGAAAAACTCCAAGGAAGATCAGGTATGTATTATGTAATATTAATTCAAGCTTTATTATTAATTGATGATTTATTAGCCTCCTTGTTTAATTTTCAAATTCATAGTGAAATTGGGAGAGTACTGTAAACACAGAAACACAGACATGTGCTCTTATTAACCAGAAATGCCATGTTAAGAAGAAGGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGTGAGAATGGATCGGTGGTAACTGAAGAATAGATGATGATGCTCAAAATAAGCATATCTTTTTGTAGTTTAATTCAAGTTTCTGTTGTTCTTGGATTGGTTACTGTTTTGTGGCGATTACTTAGACATCTTTTACATTTGCTTGTTGAGTTTGGAATTTTTGGTTATTTTGGTTTTCTCTATTGGAATATCTTGCTTAAAAAAAAAAAAAATTGTTATGATCTCTTAAACTCATCTTGTACTCAACCAATAAAATTTTAATTGGTACGAAACTAGTATATATTGTTTCCATCTATTAATTATCTCATGTACTGTTGTATATAAAATAAATAAAAAATTAAGCAATAAGTAATTTTTTTTTTCCTTTTAATTGGCAGGGAAAAGTTGTAGGTTGAGGTGGTTCAATCAGCTAGATCCAAGAATTAACAGAAGACCTTTCACTGAAGAGGAAGAAGAGAGACTACTTGCGGCTCATCGGATTCACGGGAACAAATGGGCACTAATAGCAAGACTTTTCCCTGGTAGAACTGATAATGCTGTGAAGAATCATTGGCATGTTATAATGGCTAGAAAACAAAGGGAACAATCCAAGTTATGTGGCAAGAGAAGTTTTCAAGAAGTTTTTTCTAACTCCTCTATACTTAATTTCCCTTACACAACGAGAATTGGATATGAGAATGGAAGATTCTATGATAATACACCTTCTAGTTCTCTTGCCTCTTGGAATTTTGCTTCTATGTCAACAACAACAACAAACACTACTACTGCTACTACTATTTTACCTGATAATTGCATCACAAGAAAAGGATCTAATATTTATAAAGGCTCAGATAGATCATTTCTCTACAGAATTTGTCCAAATCAAGCATTCTCGTCACTTCCAAATTACAAGAGGGTTGCTCCAAATGTTTTTGGTTTTTTAAATTCTTCTGATGATGGAAGGATAAAGAAGGATTTGGTTAGTAGTTTATGTGATAATTCATCAACATTAATCACAAACTTAAAGTCTTCCACGGACAAAGAGCAAGATCGCGATGAGGTCGAAATTGAGCAGCACAAAGAAGTTCCTTTCATTGATTTTCTTGGTGTTGGTGTCTCTTCATCATAA
Protein sequence

>MS.gene02640.t1

MEDSSSAAEDTKSCPRGHWRPAEDEKLRQLVEQYGKSCRLRWFNQLDPRINRRPFTEEEEERLLAAHRIHGNKWALIARLFPGRTDNAVKNHWHVIMARKQREQSKLCGKRSFQEVFSNSSILNFPYTTRIGYENGRFYDNTPSSSLASWNFASMSTTTTNTTTATTILPDNCITRKGSNIYKGSDRSFLYRICPNQAFSSLPNYKRVAPNVFGFLNSSDDGRIKKDLVSSLCDNSSTLITNLKSSTDKEQDRDEVEIEQHKEVPFIDFLGVGVSSS