AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene026400

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026400.t1 MTR_1g034240 95.111 450 5 1 1 450 1 433 0.0 885
MS.gene026400.t1 MTR_4g068320 60.927 453 147 7 3 450 2 429 0.0 545
MS.gene026400.t1 MTR_1g034210 55.830 446 94 9 1 420 1 369 1.45e-153 440
MS.gene026400.t1 MTR_1g034210 53.117 401 85 9 1 375 1 324 2.17e-126 369
MS.gene026400.t1 MTR_5g070440 49.495 99 50 0 7 105 21 119 8.69e-30 117
MS.gene026400.t1 MTR_3g005480 44.828 116 63 1 7 122 21 135 4.98e-29 115
MS.gene026400.t1 MTR_3g005480 32.895 152 70 5 267 410 134 261 1.50e-12 68.2
MS.gene026400.t1 MTR_3g005490 46.789 109 53 1 2 105 11 119 9.57e-29 114
MS.gene026400.t1 MTR_3g005420 45.455 99 54 0 7 105 289 387 4.90e-24 105
MS.gene026400.t1 MTR_3g005420 38.793 116 65 2 7 116 40 155 6.14e-21 95.9
MS.gene026400.t1 MTR_3g005420 30.822 146 73 4 268 409 415 536 1.27e-12 70.1
MS.gene026400.t1 MTR_3g005495 44.444 99 55 0 7 105 243 341 1.09e-23 103
MS.gene026400.t1 MTR_3g005495 44.681 94 51 1 22 115 28 120 2.16e-19 90.9
MS.gene026400.t1 MTR_3g005460 44.037 109 60 1 7 115 25 132 1.30e-23 103
MS.gene026400.t1 MTR_3g005460 46.000 100 53 1 7 105 262 361 1.80e-23 103
MS.gene026400.t1 MTR_7g050580 41.525 118 65 2 4 120 9 123 3.32e-22 97.1
MS.gene026400.t1 MTR_3g005440 44.444 99 55 0 7 105 242 340 5.30e-22 98.2
MS.gene026400.t1 MTR_3g005440 44.706 85 47 0 21 105 34 118 1.14e-19 91.3
MS.gene026400.t1 MTR_3g061290 36.170 141 80 2 7 147 12 142 5.54e-22 94.0
MS.gene026400.t1 MTR_7g050710 44.444 99 55 0 7 105 13 111 9.75e-22 95.9
MS.gene026400.t1 MTR_7g050560 42.424 99 57 0 7 105 13 111 1.12e-21 95.5
MS.gene026400.t1 MTR_3g061320 42.424 99 55 1 7 105 12 108 3.27e-21 93.6
MS.gene026400.t1 MTR_7g050720 42.857 105 60 0 3 107 6 110 4.00e-21 94.0
MS.gene026400.t1 MTR_3g005420 38.793 116 65 2 7 116 21 136 4.36e-21 95.9
MS.gene026400.t1 MTR_3g005420 43.662 71 40 0 7 77 270 340 1.30e-15 79.3
MS.gene026400.t1 MTR_3g005420 30.612 147 74 4 268 410 361 483 1.18e-12 70.1
MS.gene026400.t1 MTR_3g061340 37.500 112 67 2 7 117 12 121 7.52e-21 92.4
MS.gene026400.t1 MTR_3g061330 41.176 102 58 1 7 108 12 111 1.25e-20 91.3
MS.gene026400.t1 MTR_3g061310 38.596 114 66 2 1 114 8 117 4.44e-20 90.5
MS.gene026400.t1 MTR_3g098790 41.414 99 58 0 7 105 13 111 4.76e-20 91.3
MS.gene026400.t1 MTR_3g098790 26.126 222 124 7 209 409 97 299 1.90e-13 71.6
MS.gene026400.t1 MTR_7g050590 44.578 83 46 0 23 105 2 84 1.93e-19 89.0
MS.gene026400.t1 MTR_8g103940 41.000 100 59 0 7 106 39 138 1.96e-19 90.9
MS.gene026400.t1 MTR_8g103940 27.586 174 98 5 243 415 191 337 4.62e-14 74.3
MS.gene026400.t1 MTR_5g044670 39.604 101 61 0 7 107 16 116 6.24e-19 87.8
MS.gene026400.t1 MTR_1g035460 36.585 123 65 2 23 142 2 114 9.40e-19 88.2
MS.gene026400.t1 MTR_1g035460 30.935 139 71 3 287 425 187 300 1.54e-14 75.5
MS.gene026400.t1 MTR_3g061350 37.963 108 65 1 7 114 12 117 3.88e-18 84.7
MS.gene026400.t1 MTR_1g021270 23.002 413 243 13 4 413 13 353 4.96e-17 84.0
MS.gene026400.t1 MTR_3g061370 35.185 108 68 1 7 114 9 114 6.97e-17 81.3
MS.gene026400.t1 MTR_7g050640 39.785 93 56 0 7 99 13 105 1.45e-16 75.9
MS.gene026400.t1 MTR_1g021330 22.194 392 229 10 19 406 38 357 5.19e-15 76.6
MS.gene026400.t1 MTR_3g061220 33.945 109 57 2 7 115 12 105 2.34e-14 69.7
MS.gene026400.t1 MTR_1g108780 36.364 121 62 3 22 142 12 117 2.51e-14 75.1
MS.gene026400.t1 MTR_1g108780 31.507 146 73 5 274 417 178 298 4.15e-13 71.2
MS.gene026400.t1 MTR_1g021400 44.304 79 44 0 19 97 42 120 1.29e-12 69.3
MS.gene026400.t1 MTR_1g021350 39.773 88 53 0 10 97 24 111 2.86e-12 68.2
MS.gene026400.t1 MTR_1g021440 38.462 91 55 1 7 97 23 112 7.12e-12 66.6
MS.gene026400.t1 MTR_1g021440 38.462 91 55 1 7 97 23 112 8.23e-12 66.2
MS.gene026400.t1 MTR_1g021320 37.931 87 53 1 11 97 187 272 1.27e-11 67.4
MS.gene026400.t1 MTR_1g021440 41.772 79 46 0 19 97 34 112 1.86e-11 65.9
MS.gene026400.t1 MTR_1g021360 39.560 91 54 1 7 97 26 115 2.03e-11 66.2
MS.gene026400.t1 MTR_1g021360 40.506 79 47 0 19 97 194 272 4.27e-11 65.1
MS.gene026400.t1 MTR_1g021440 41.772 79 46 0 19 97 34 112 2.14e-11 65.9
MS.gene026400.t1 MTR_1g035570 33.333 111 67 3 5 115 7 110 3.09e-11 65.5
MS.gene026400.t1 MTR_1g021410 41.772 79 46 0 19 97 34 112 5.29e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene026400.t1 AT3G18990 49.392 411 134 8 3 412 2 339 2.00e-126 370
MS.gene026400.t1 AT3G18990 49.148 411 135 8 3 412 2 339 6.11e-125 367
MS.gene026400.t1 AT1G49480 64.972 177 43 3 237 412 66 224 8.60e-74 231
MS.gene026400.t1 AT1G49480 64.972 177 43 3 237 412 66 224 8.60e-74 231
MS.gene026400.t1 AT1G49480 64.972 177 43 3 237 412 66 224 8.60e-74 231
MS.gene026400.t1 AT4G01580 42.718 103 59 0 3 105 26 128 5.36e-24 99.4
MS.gene026400.t1 AT3G18960 40.777 103 61 0 3 105 26 128 9.46e-23 95.9
MS.gene026400.t1 AT3G18960 40.777 103 61 0 3 105 26 128 1.19e-22 95.9
MS.gene026400.t1 AT1G49475 35.849 106 64 2 3 105 27 131 7.64e-17 79.0
MS.gene026400.t1 AT3G18960 40.000 90 54 0 16 105 2 91 1.38e-16 77.8

Find 105 sgRNAs with CRISPR-Local

Find 240 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTACATTAGAGAACAATTT+AGG 0.133108 1.1:+19026615 MS.gene026400:CDS
AAGAATTTGAACGGTGTTTC+AGG 0.187714 1.1:+19026498 MS.gene026400:CDS
AAAAGGTTGACAACCGAATT+TGG 0.209979 1.1:+19025328 MS.gene026400:CDS
TCATTGCAGAATTTGTTTAA+TGG 0.251640 1.1:+19025675 MS.gene026400:CDS
CTAAACTCAACCACGTTAAC+TGG 0.274983 1.1:+19025703 MS.gene026400:CDS
CATTGCAGAATTTGTTTAAT+GGG 0.276665 1.1:+19025676 MS.gene026400:CDS
TTATTAACCCCTTCCTCATT+AGG 0.282526 1.1:-19025843 None:intergenic
TGATGGCACTGTCTGGCGTC+TGG 0.293334 1.1:+19025299 MS.gene026400:CDS
TATCGACTCCTTTGAATTCC+TGG 0.294296 1.1:+19025557 MS.gene026400:CDS
TATTTCCTAAGAAAATTATC+TGG 0.317191 1.1:-19025237 None:intergenic
TTACATTAGAGAACAATTTA+GGG 0.336001 1.1:+19026616 MS.gene026400:CDS
CTGGCGTCTGGGATTGAAAA+AGG 0.342376 1.1:+19025311 MS.gene026400:CDS
CAAAGCAGGAAGGCAAATAC+TGG 0.378699 1.1:-19026470 None:intergenic
ATCCTTGGCTTAACTTTGCT+CGG 0.390374 1.1:-19026584 None:intergenic
CGTGTAAAAGAGGACGAGTC+AGG 0.395227 1.1:+19026705 MS.gene026400:CDS
TTACCAATTGTCTAGTTTGA+AGG 0.397207 1.1:-19023458 None:intergenic
ATCCCTTCAAACTAGACAAT+TGG 0.398966 1.1:+19023455 MS.gene026400:CDS
TTGCTCGGCCTCCTTTATAT+AGG 0.399413 1.1:-19026569 None:intergenic
TTTATATAGAGGATGTATAA+TGG 0.403472 1.1:+19026361 MS.gene026400:CDS
CGGCCCTCTTATTTATATAG+AGG 0.407946 1.1:+19026350 MS.gene026400:CDS
TTTCTAGTATTCACTTATGA+AGG 0.411457 1.1:+19025405 MS.gene026400:CDS
ATTCAGTCAACCAGAGATAT+AGG 0.424869 1.1:+19025762 MS.gene026400:CDS
AGCCATCGACAAACCAAATT+CGG 0.433503 1.1:-19025341 None:intergenic
CTGTTCCTGATGGCACTGTC+TGG 0.439890 1.1:+19025292 MS.gene026400:CDS
CTTGCAATGCACCAGGAGTA+AGG 0.441488 1.1:-19025596 None:intergenic
GAATTTGGTTTGTCGATGGC+TGG 0.442071 1.1:+19025343 MS.gene026400:CDS
TATATCTCTGGTTGACTGAA+TGG 0.443124 1.1:-19025760 None:intergenic
TTAAACAAATTCTGCAATGA+TGG 0.444180 1.1:-19025672 None:intergenic
CACTTTGTTTCGTGTAAAAG+AGG 0.446820 1.1:+19026695 MS.gene026400:CDS
ACATCCTCTATATAAATAAG+AGG 0.453294 1.1:-19026354 None:intergenic
TTTGTTCAACGTTACTCCAT+TGG 0.453832 1.1:+19025372 MS.gene026400:CDS
CAACGTTACTCCATTGGCAT+TGG 0.459331 1.1:+19025378 MS.gene026400:CDS
ATGTAAATTCATACCATCCT+TGG 0.460863 1.1:-19026599 None:intergenic
GATGGCACTGTCTGGCGTCT+GGG 0.465269 1.1:+19025300 MS.gene026400:CDS
TGTCTAGTTTGAAGGGATGA+AGG 0.472503 1.1:-19023450 None:intergenic
CCTTTATATAGGCAGCGAAC+AGG 0.472865 1.1:-19026558 None:intergenic
ATTAAGCTTCAGATCTCTGA+TGG 0.476714 1.1:+19026525 MS.gene026400:CDS
CACGTTAACTGGGGAGATAT+CGG 0.483067 1.1:+19025714 MS.gene026400:CDS
GACTTGCAGCACTACCTCTC+TGG 0.488129 1.1:-19026673 None:intergenic
GCACCAGGAGTAAGGTTTGA+AGG 0.495370 1.1:-19025588 None:intergenic
GGGTTGCAATAGTCGAAAGC+TGG 0.499258 1.1:-19025266 None:intergenic
CCCTTCAGTACGGCTTCTCA+TGG 0.501141 1.1:-19025490 None:intergenic
TAACAGCAGAAGAAAGAGAA+AGG 0.504497 1.1:+19026270 MS.gene026400:CDS
GAACTGAACACCTATATCTC+TGG 0.504709 1.1:-19025772 None:intergenic
CTGATTTAGTTGAGCTGACA+CGG 0.508771 1.1:-19026800 None:intergenic
ACTCTACAGAATGGATTGGT+TGG 0.509007 1.1:-19026320 None:intergenic
TAAACTCAACCACGTTAACT+GGG 0.517161 1.1:+19025704 MS.gene026400:CDS
TACCAATTGTCTAGTTTGAA+GGG 0.519590 1.1:-19023457 None:intergenic
CCTGTTCGCTGCCTATATAA+AGG 0.526982 1.1:+19026558 MS.gene026400:CDS
TCACCTTCAAACCTTACTCC+TGG 0.530653 1.1:+19025585 MS.gene026400:CDS
AGACGCCAGACAGTGCCATC+AGG 0.531089 1.1:-19025297 None:intergenic
CATAGCAAGGCCCTTCAGTA+CGG 0.538460 1.1:-19025500 None:intergenic
AACAGCAGAAGAAAGAGAAA+GGG 0.540440 1.1:+19026271 MS.gene026400:CDS
GTCTAGTTTGAAGGGATGAA+GGG 0.543517 1.1:-19023449 None:intergenic
GGTTTGAAGGTGATGAATCC+AGG 0.544026 1.1:-19025575 None:intergenic
GGATGATAATTTGCATAGCA+AGG 0.545527 1.1:-19025513 None:intergenic
AGAATGAGCTTGTGAAAAGA+AGG 0.547922 1.1:-19023426 None:intergenic
ATTGCAGAATTTGTTTAATG+GGG 0.548631 1.1:+19025677 MS.gene026400:CDS
TCCTGGTGCATTGCAAGACA+AGG 0.548892 1.1:+19025602 MS.gene026400:CDS
ACCTTGTCTTGCAATGCACC+AGG 0.549286 1.1:-19025603 None:intergenic
TTGTGTAACTGTAGGTGCAC+TGG 0.551946 1.1:+19026172 MS.gene026400:intron
GCCATGAGAAGCCGTACTGA+AGG 0.554864 1.1:+19025489 MS.gene026400:CDS
CTGACACGGTGCTGCAAGTG+AGG 0.554904 1.1:-19026786 None:intergenic
TTGCGCTATCCTAATGAGGA+AGG 0.562431 1.1:+19025834 MS.gene026400:CDS
TATATAAATAAGAGGGCCGC+AGG 0.564081 1.1:-19026346 None:intergenic
TTAGAGAACAATTTAGGGGA+AGG 0.568521 1.1:+19026621 MS.gene026400:CDS
GGCCGAGCAAAGTTAAGCCA+AGG 0.570951 1.1:+19026582 MS.gene026400:CDS
CATCCTCTATATAAATAAGA+GGG 0.573160 1.1:-19026353 None:intergenic
TTTGGCTTGGTTGTGAAGAA+GGG 0.575829 1.1:-19026737 None:intergenic
AACCGAATTTGGTTTGTCGA+TGG 0.576855 1.1:+19025339 MS.gene026400:CDS
TGCAGAATTTGTTTAATGGG+GGG 0.577486 1.1:+19025679 MS.gene026400:CDS
TTGCAGAATTTGTTTAATGG+GGG 0.578544 1.1:+19025678 MS.gene026400:CDS
TGCGCTATCCTAATGAGGAA+GGG 0.580496 1.1:+19025835 MS.gene026400:CDS
GAAATTGCGCTATCCTAATG+AGG 0.581484 1.1:+19025830 MS.gene026400:CDS
TTTGCAGAAAAGAATTTGAA+CGG 0.582980 1.1:+19026489 MS.gene026400:CDS
GGTTGCAATAGTCGAAAGCT+GGG 0.584695 1.1:-19025265 None:intergenic
TGATGAATCCAGGAATTCAA+AGG 0.585718 1.1:-19025565 None:intergenic
GCGCTATCCTAATGAGGAAG+GGG 0.586754 1.1:+19025836 MS.gene026400:CDS
GACAACTCTACAGAATGGAT+TGG 0.593488 1.1:-19026324 None:intergenic
CGATATCTCCCCAGTTAACG+TGG 0.595115 1.1:-19025713 None:intergenic
TAGAAAGTATCCAATGCCAA+TGG 0.595339 1.1:-19025388 None:intergenic
CACTGCTGAAAATGATGAGG+AGG 0.595680 1.1:+19026199 MS.gene026400:CDS
CGCAGGACAACTCTACAGAA+TGG 0.599765 1.1:-19026329 None:intergenic
GCAACCCTCACTGTTCCTGA+TGG 0.602871 1.1:+19025282 MS.gene026400:CDS
TTAAGCTTCAGATCTCTGAT+GGG 0.604595 1.1:+19026526 MS.gene026400:CDS
AGAAAACTTCAAGAAAGAAG+CGG 0.610439 1.1:+19025877 MS.gene026400:CDS
GCGCAATTTCAATCCTTCAG+TGG 0.610517 1.1:-19025817 None:intergenic
GATGGAGTATGATTCTTCGC+TGG 0.611475 1.1:-19025654 None:intergenic
CCATGAGAAGCCGTACTGAA+GGG 0.612450 1.1:+19025490 MS.gene026400:CDS
AGATCTCTGATGGGAGACAG+TGG 0.629937 1.1:+19026535 MS.gene026400:CDS
TACATTAGAGAACAATTTAG+GGG 0.630150 1.1:+19026617 MS.gene026400:CDS
GTGTAAAAGAGGACGAGTCA+GGG 0.630504 1.1:+19026706 MS.gene026400:CDS
GAGCAAAGTTAAGCCAAGGA+TGG 0.643193 1.1:+19026586 MS.gene026400:CDS
TGACACGGTGCTGCAAGTGA+GGG 0.655075 1.1:-19026785 None:intergenic
TATCTTTAATATGAGTACTG+CGG 0.656513 1.1:+19025449 MS.gene026400:CDS
GTTCGCTGCCTATATAAAGG+AGG 0.657822 1.1:+19026561 MS.gene026400:CDS
AGTGCCATCAGGAACAGTGA+GGG 0.674235 1.1:-19025286 None:intergenic
TGAGCTGCTTAGAACCAGAG+AGG 0.682743 1.1:+19026659 MS.gene026400:CDS
AGCCACTGCTGAAAATGATG+AGG 0.685162 1.1:+19026196 MS.gene026400:CDS
CAGTGCCATCAGGAACAGTG+AGG 0.694859 1.1:-19025287 None:intergenic
TTGTGAAAAGAAGGACGAGG+AGG 0.697547 1.1:-19023417 None:intergenic
AGCTTGTGAAAAGAAGGACG+AGG 0.710821 1.1:-19023420 None:intergenic
AAACTCAACCACGTTAACTG+GGG 0.714026 1.1:+19025705 MS.gene026400:CDS
CATTCTGTAGAGTTGTCCTG+CGG 0.717327 1.1:+19026330 MS.gene026400:CDS
GTTAACTGGGGAGATATCGG+TGG 0.726802 1.1:+19025717 MS.gene026400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTATTATTAAATAAAT+TGG - chr1.1:19024968-19024987 None:intergenic 0.0%
!!! CATTTTTTTTTTTTTTGAAT+TGG + chr1.1:19023504-19023523 MS.gene026400:intron 10.0%
!! ATCCAAACTTTATAAAAAAA+AGG - chr1.1:19023652-19023671 None:intergenic 15.0%
!! CTTAAAATCATTAATATATG+TGG + chr1.1:19024002-19024021 MS.gene026400:intron 15.0%
!! TCCAAACTTTATAAAAAAAA+GGG - chr1.1:19023651-19023670 None:intergenic 15.0%
!!! ATAATTTTCTTAGGAAATAT+GGG + chr1.1:19025241-19025260 MS.gene026400:CDS 15.0%
!!! CACATATATTAATGATTTTA+AGG - chr1.1:19024004-19024023 None:intergenic 15.0%
!!! TATAAAGTTTGGATTTTTTT+AGG + chr1.1:19023658-19023677 MS.gene026400:intron 15.0%
!!! TATGAATTTAAGTTTACATA+AGG + chr1.1:19025032-19025051 MS.gene026400:intron 15.0%
!!! TCTTTTGATCTTTTTAATTT+TGG + chr1.1:19024586-19024605 MS.gene026400:intron 15.0%
!! CCAAACTTTATAAAAAAAAG+GGG - chr1.1:19023650-19023669 None:intergenic 20.0%
!! TATTTCCTAAGAAAATTATC+TGG - chr1.1:19025240-19025259 None:intergenic 20.0%
!! TTACATTAGAGAACAATTTA+GGG + chr1.1:19026616-19026635 MS.gene026400:CDS 20.0%
!! TTATGAGCATTACTAATATT+TGG + chr1.1:19025182-19025201 MS.gene026400:intron 20.0%
!! TTATGATTGTTGTAAGAAAA+GGG + chr1.1:19023564-19023583 MS.gene026400:intron 20.0%
!! TTTAATTGAGACTATCATAT+TGG + chr1.1:19024158-19024177 MS.gene026400:intron 20.0%
!! TTTACATTAGAGAACAATTT+AGG + chr1.1:19026615-19026634 MS.gene026400:CDS 20.0%
!! TTTATATAGAGGATGTATAA+TGG + chr1.1:19026361-19026380 MS.gene026400:CDS 20.0%
!!! AAGCATAAAAGTATTTTTGT+TGG - chr1.1:19025013-19025032 None:intergenic 20.0%
!!! AATTTAATTTGTGTAACTGT+AGG + chr1.1:19026164-19026183 MS.gene026400:intron 20.0%
!!! CTTTTTAATTTTGGTAAAAG+AGG + chr1.1:19024595-19024614 MS.gene026400:intron 20.0%
!!! GATAATTTTCTTAGGAAATA+TGG + chr1.1:19025240-19025259 MS.gene026400:CDS 20.0%
!!! TAATTTTCTTAGGAAATATG+GGG + chr1.1:19025242-19025261 MS.gene026400:CDS 20.0%
!!! TTTTGTTTCATGTTTTTGAT+TGG + chr1.1:19023529-19023548 MS.gene026400:intron 20.0%
! AAAAACTACTCATTTCCAAA+TGG - chr1.1:19024706-19024725 None:intergenic 25.0%
! AAAACCTCTTCTATTAAGTA+TGG + chr1.1:19024655-19024674 MS.gene026400:intron 25.0%
! AAAAGATCAAAAGAAGTTCA+AGG - chr1.1:19024580-19024599 None:intergenic 25.0%
! ACATCCTCTATATAAATAAG+AGG - chr1.1:19026357-19026376 None:intergenic 25.0%
! AGACAATGAAATCATAAACA+TGG - chr1.1:19025116-19025135 None:intergenic 25.0%
! AGTCTCAATTAAAACACATT+TGG - chr1.1:19024151-19024170 None:intergenic 25.0%
! ATAAACATGGAATCATAACA+CGG - chr1.1:19025103-19025122 None:intergenic 25.0%
! CATCCTCTATATAAATAAGA+GGG - chr1.1:19026356-19026375 None:intergenic 25.0%
! GTTATGATTGTTGTAAGAAA+AGG + chr1.1:19023563-19023582 MS.gene026400:intron 25.0%
! TACATTAGAGAACAATTTAG+GGG + chr1.1:19026617-19026636 MS.gene026400:CDS 25.0%
! TCTTCAATGTCTTCAAAAAT+AGG - chr1.1:19025537-19025556 None:intergenic 25.0%
! TTAAACAAATTCTGCAATGA+TGG - chr1.1:19025675-19025694 None:intergenic 25.0%
! TTCTATTAAGTATGGAAAGT+TGG + chr1.1:19024663-19024682 MS.gene026400:intron 25.0%
! TTTGCAGAAAAGAATTTGAA+CGG + chr1.1:19026489-19026508 MS.gene026400:CDS 25.0%
!! AACCAACCAATTCAATTTTA+GGG - chr1.1:19023872-19023891 None:intergenic 25.0%
!! ATTGCAGAATTTGTTTAATG+GGG + chr1.1:19025677-19025696 MS.gene026400:CDS 25.0%
!! CATTGCAGAATTTGTTTAAT+GGG + chr1.1:19025676-19025695 MS.gene026400:CDS 25.0%
!! TAACCAACCAATTCAATTTT+AGG - chr1.1:19023873-19023892 None:intergenic 25.0%
!! TATCTTTAATATGAGTACTG+CGG + chr1.1:19025449-19025468 MS.gene026400:CDS 25.0%
!! TCATTGCAGAATTTGTTTAA+TGG + chr1.1:19025675-19025694 MS.gene026400:CDS 25.0%
!! TTGTAAGAAAAGGGTTTTTA+GGG + chr1.1:19023573-19023592 MS.gene026400:intron 25.0%
!! TTTCTAGTATTCACTTATGA+AGG + chr1.1:19025405-19025424 MS.gene026400:CDS 25.0%
!! TTTTAGCCCTAAAATTGAAT+TGG + chr1.1:19023863-19023882 MS.gene026400:intron 25.0%
!!! AATGTTATTTTCAATTGCAG+AGG + chr1.1:19025211-19025230 MS.gene026400:intron 25.0%
!!! AATTTGATTCAGTGTTGTTT+AGG + chr1.1:19023785-19023804 MS.gene026400:intron 25.0%
!!! ATTTTTAGTCACTCATTCAA+AGG - chr1.1:19024478-19024497 None:intergenic 25.0%
!!! CCCCTTTTTTTTATAAAGTT+TGG + chr1.1:19023647-19023666 MS.gene026400:intron 25.0%
!!! GTTTAGGTTTTGTGATTTTT+CGG + chr1.1:19023801-19023820 MS.gene026400:intron 25.0%
!!! TATAAAAAAAAGGGGTATCA+GGG - chr1.1:19023642-19023661 None:intergenic 25.0%
!!! TGATTTTAAGGAAAACATCA+AGG - chr1.1:19023992-19024011 None:intergenic 25.0%
!!! TTATAAAAAAAAGGGGTATC+AGG - chr1.1:19023643-19023662 None:intergenic 25.0%
!!! TTTAGGTTTTGTGATTTTTC+GGG + chr1.1:19023802-19023821 MS.gene026400:intron 25.0%
AAAAAAAACGCACCTTTGAA+CGG + chr1.1:19024867-19024886 MS.gene026400:intron 30.0%
AAAAGAAGTTCAAGGATTTG+GGG - chr1.1:19024572-19024591 None:intergenic 30.0%
AAACTCAGTGATCAAAATCA+TGG - chr1.1:19023697-19023716 None:intergenic 30.0%
AACTCAGTGATCAAAATCAT+GGG - chr1.1:19023696-19023715 None:intergenic 30.0%
ACTAACTACCATGCTAAAAA+CGG - chr1.1:19024742-19024761 None:intergenic 30.0%
AGAAAACTTCAAGAAAGAAG+CGG + chr1.1:19025877-19025896 MS.gene026400:CDS 30.0%
ATGTAAATTCATACCATCCT+TGG - chr1.1:19026602-19026621 None:intergenic 30.0%
CAAAAGAAGTTCAAGGATTT+GGG - chr1.1:19024573-19024592 None:intergenic 30.0%
CTGTTATGATTCTTGATGAA+GGG + chr1.1:19023724-19023743 MS.gene026400:intron 30.0%
CTTATCTAAAAGAGCTTACT+TGG - chr1.1:19025912-19025931 None:intergenic 30.0%
CTTTCCATACTTAATAGAAG+AGG - chr1.1:19024662-19024681 None:intergenic 30.0%
CTTTGAATGAGAAATTCTTG+TGG + chr1.1:19023916-19023935 MS.gene026400:intron 30.0%
TCAAAAGAAGTTCAAGGATT+TGG - chr1.1:19024574-19024593 None:intergenic 30.0%
TCTGTTATGATTCTTGATGA+AGG + chr1.1:19023723-19023742 MS.gene026400:intron 30.0%
TCTTCTCTTTCACTTAAAAC+AGG - chr1.1:19024087-19024106 None:intergenic 30.0%
TTTAAACTCGAGATTTGACT+CGG - chr1.1:19025147-19025166 None:intergenic 30.0%
TTTAACTACCATGCTGAAAA+TGG - chr1.1:19024304-19024323 None:intergenic 30.0%
! GGATTCCAGATAATTTTCTT+AGG + chr1.1:19025232-19025251 MS.gene026400:CDS 30.0%
! GTTGTAAGAAAAGGGTTTTT+AGG + chr1.1:19023572-19023591 MS.gene026400:intron 30.0%
! TACCAATTGTCTAGTTTGAA+GGG - chr1.1:19023460-19023479 None:intergenic 30.0%
! TTACCAATTGTCTAGTTTGA+AGG - chr1.1:19023461-19023480 None:intergenic 30.0%
! TTGCAGAATTTGTTTAATGG+GGG + chr1.1:19025678-19025697 MS.gene026400:CDS 30.0%
! TTTTTAACAGGTCATGTACT+CGG - chr1.1:19024852-19024871 None:intergenic 30.0%
!! ATGATTTTGATCACTGAGTT+TGG + chr1.1:19023696-19023715 MS.gene026400:intron 30.0%
!!! AAAGGTGCGTTTTTTTTAAC+AGG - chr1.1:19024864-19024883 None:intergenic 30.0%
!!! AGGGTTTTGGTTGATTTTTT+AGG + chr1.1:19023592-19023611 MS.gene026400:intron 30.0%
!!! GGGTTTTGGTTGATTTTTTA+GGG + chr1.1:19023593-19023612 MS.gene026400:intron 30.0%
AAAAGGTTGACAACCGAATT+TGG + chr1.1:19025328-19025347 MS.gene026400:CDS 35.0%
AACAGCAGAAGAAAGAGAAA+GGG + chr1.1:19026271-19026290 MS.gene026400:CDS 35.0%
AAGAATTTGAACGGTGTTTC+AGG + chr1.1:19026498-19026517 MS.gene026400:CDS 35.0%
ACACATTTCCAAATTGCTAC+TGG - chr1.1:19024264-19024283 None:intergenic 35.0%
AGAATGAGCTTGTGAAAAGA+AGG - chr1.1:19023429-19023448 None:intergenic 35.0%
AGCCCTAAAATTGAATTGGT+TGG + chr1.1:19023867-19023886 MS.gene026400:intron 35.0%
ATCCCTTCAAACTAGACAAT+TGG + chr1.1:19023455-19023474 MS.gene026400:CDS 35.0%
ATTAAGCTTCAGATCTCTGA+TGG + chr1.1:19026525-19026544 MS.gene026400:CDS 35.0%
ATTCAGTCAACCAGAGATAT+AGG + chr1.1:19025762-19025781 MS.gene026400:CDS 35.0%
CACTTAGTAAGTATGACCTT+TGG + chr1.1:19024228-19024247 MS.gene026400:intron 35.0%
CTAGGAAATTTGAGGATTTG+CGG - chr1.1:19024623-19024642 None:intergenic 35.0%
GAAATGTCGAAGAAGACTAA+AGG - chr1.1:19026419-19026438 None:intergenic 35.0%
GAGTTTAAAAAGTCCACTGA+AGG + chr1.1:19025804-19025823 MS.gene026400:CDS 35.0%
TAAACTCAACCACGTTAACT+GGG + chr1.1:19025704-19025723 MS.gene026400:CDS 35.0%
TAACAGCAGAAGAAAGAGAA+AGG + chr1.1:19026270-19026289 MS.gene026400:CDS 35.0%
TACTGGCAATAACAATCCAA+AGG - chr1.1:19024247-19024266 None:intergenic 35.0%
TATATCTCTGGTTGACTGAA+TGG - chr1.1:19025763-19025782 None:intergenic 35.0%
TGATGAATCCAGGAATTCAA+AGG - chr1.1:19025568-19025587 None:intergenic 35.0%
TGTTATTGCCAGTAGCAATT+TGG + chr1.1:19024253-19024272 MS.gene026400:intron 35.0%
TTAAGCTTCAGATCTCTGAT+GGG + chr1.1:19026526-19026545 MS.gene026400:CDS 35.0%
TTAGAGAACAATTTAGGGGA+AGG + chr1.1:19026621-19026640 MS.gene026400:CDS 35.0%
TTATTAACCCCTTCCTCATT+AGG - chr1.1:19025846-19025865 None:intergenic 35.0%
TTGCATGTCTAGGAAATTTG+AGG - chr1.1:19024631-19024650 None:intergenic 35.0%
TTTAACAGGGGTCATATACT+CGG - chr1.1:19024446-19024465 None:intergenic 35.0%
TTTGTTCAACGTTACTCCAT+TGG + chr1.1:19025372-19025391 MS.gene026400:CDS 35.0%
! AAACCTTTTCTCACCAGAAA+AGG + chr1.1:19024544-19024563 MS.gene026400:intron 35.0%
! ATGAATCTCCATTTTCAGCA+TGG + chr1.1:19024293-19024312 MS.gene026400:intron 35.0%
! CAAATTCTTTTCTGCAAAGC+AGG - chr1.1:19026487-19026506 None:intergenic 35.0%
! CACTTTGTTTCGTGTAAAAG+AGG + chr1.1:19026695-19026714 MS.gene026400:CDS 35.0%
! GGATGATAATTTGCATAGCA+AGG - chr1.1:19025516-19025535 None:intergenic 35.0%
! GGTTTTTCATTTGCATGTCT+AGG - chr1.1:19024641-19024660 None:intergenic 35.0%
! TGCAGAATTTGTTTAATGGG+GGG + chr1.1:19025679-19025698 MS.gene026400:CDS 35.0%
! TTTTTGCATGGCTCACATTT+TGG - chr1.1:19026758-19026777 None:intergenic 35.0%
!! AAATTGGTTCGACCTAAGTA+TGG - chr1.1:19024952-19024971 None:intergenic 35.0%
!! AATTGGTTCGACCTAAGTAT+GGG - chr1.1:19024951-19024970 None:intergenic 35.0%
!! GCACTGACATTTTAGATCAA+AGG + chr1.1:19025961-19025980 MS.gene026400:intron 35.0%
!! GTGTTGAAATTTTGATCACC+AGG + chr1.1:19023828-19023847 MS.gene026400:intron 35.0%
!! GTTAGTTTGTTTGTGTCTAG+TGG + chr1.1:19023889-19023908 MS.gene026400:intron 35.0%
!! TAGAAAGTATCCAATGCCAA+TGG - chr1.1:19025391-19025410 None:intergenic 35.0%
!! TTGCAAGACAAGGTTTTTAG+TGG + chr1.1:19025612-19025631 MS.gene026400:CDS 35.0%
!!! AAAGGTGCGTTGTTTTTAAC+AGG - chr1.1:19024460-19024479 None:intergenic 35.0%
!!! AAGGTGCGTTGTTTTTAACA+GGG - chr1.1:19024459-19024478 None:intergenic 35.0%
!!! CAAGGTTTTTAGTGGATCTT+TGG + chr1.1:19025620-19025639 MS.gene026400:CDS 35.0%
!!! GAAAAGGGTTTTTAGGGTTT+TGG + chr1.1:19023579-19023598 MS.gene026400:intron 35.0%
!!! GGTTGATTTTTTAGGGTATG+TGG + chr1.1:19023600-19023619 MS.gene026400:intron 35.0%
!!! TCACCTTTTGAAATGATGAC+CGG + chr1.1:19026059-19026078 MS.gene026400:intron 35.0%
AAACTCAACCACGTTAACTG+GGG + chr1.1:19025705-19025724 MS.gene026400:CDS 40.0%
AAATTAACACACACGACCAC+AGG - chr1.1:19024419-19024438 None:intergenic 40.0%
AATGATGTGTGTCAGACACT+CGG - chr1.1:19025992-19026011 None:intergenic 40.0%
ACACCGGTCATCATTTCAAA+AGG - chr1.1:19026065-19026084 None:intergenic 40.0%
AGCCATCGACAAACCAAATT+CGG - chr1.1:19025344-19025363 None:intergenic 40.0%
ATATCGCACCTAATCACTGA+TGG + chr1.1:19024820-19024839 MS.gene026400:intron 40.0%
ATCCTTGGCTTAACTTTGCT+CGG - chr1.1:19026587-19026606 None:intergenic 40.0%
ATCTCAAACCTAATCGCAGA+TGG + chr1.1:19024387-19024406 MS.gene026400:intron 40.0%
CAAGGAAGTTTGAGGATTCT+CGG - chr1.1:19024898-19024917 None:intergenic 40.0%
CTAAAATCAACTCAGCAACC+TGG - chr1.1:19023849-19023868 None:intergenic 40.0%
CTAAACTCAACCACGTTAAC+TGG + chr1.1:19025703-19025722 MS.gene026400:CDS 40.0%
CTGATTTAGTTGAGCTGACA+CGG - chr1.1:19026803-19026822 None:intergenic 40.0%
GAAATTGCGCTATCCTAATG+AGG + chr1.1:19025830-19025849 MS.gene026400:CDS 40.0%
GAACTGAACACCTATATCTC+TGG - chr1.1:19025775-19025794 None:intergenic 40.0%
GACAACTCTACAGAATGGAT+TGG - chr1.1:19026327-19026346 None:intergenic 40.0%
GGCAAAAACCATCAGTGATT+AGG - chr1.1:19024831-19024850 None:intergenic 40.0%
GGCTTTACATTTGCAGATCT+AGG - chr1.1:19024511-19024530 None:intergenic 40.0%
TATATAAATAAGAGGGCCGC+AGG - chr1.1:19026349-19026368 None:intergenic 40.0%
TGGTCGTGTGTGTTAATTTC+AGG + chr1.1:19024420-19024439 MS.gene026400:intron 40.0%
! CGGCCCTCTTATTTATATAG+AGG + chr1.1:19026350-19026369 MS.gene026400:CDS 40.0%
! GAAAGTTGGATTGCTATTGC+TGG + chr1.1:19024677-19024696 MS.gene026400:intron 40.0%
! GAGGGTTCAACATTTTTGCA+TGG - chr1.1:19026770-19026789 None:intergenic 40.0%
! GTCTAGTTTGAAGGGATGAA+GGG - chr1.1:19023452-19023471 None:intergenic 40.0%
! TCTGGTGAGAAAAGGTTTTC+TGG - chr1.1:19024542-19024561 None:intergenic 40.0%
! TGTCTAGTTTGAAGGGATGA+AGG - chr1.1:19023453-19023472 None:intergenic 40.0%
! TTCTTTTCTGCAAAGCAGGA+AGG - chr1.1:19026483-19026502 None:intergenic 40.0%
!! AAAGGTTTTCTGGTGAGAAG+AGG - chr1.1:19024532-19024551 None:intergenic 40.0%
!! AACCGAATTTGGTTTGTCGA+TGG + chr1.1:19025339-19025358 MS.gene026400:CDS 40.0%
!! ACTCTACAGAATGGATTGGT+TGG - chr1.1:19026323-19026342 None:intergenic 40.0%
!! TATCGACTCCTTTGAATTCC+TGG + chr1.1:19025557-19025576 MS.gene026400:CDS 40.0%
!! TTTGGCTTGGTTGTGAAGAA+GGG - chr1.1:19026740-19026759 None:intergenic 40.0%
!!! ACGAATCTCCGTTTTTAGCA+TGG + chr1.1:19024731-19024750 MS.gene026400:intron 40.0%
!!! AGGTGCGTTGTTTTTAACAG+GGG - chr1.1:19024458-19024477 None:intergenic 40.0%
!!! TTTTGGCTTGGTTGTGAAGA+AGG - chr1.1:19026741-19026760 None:intergenic 40.0%
AGCCACTGCTGAAAATGATG+AGG + chr1.1:19026196-19026215 MS.gene026400:CDS 45.0%
AGCTTGTGAAAAGAAGGACG+AGG - chr1.1:19023423-19023442 None:intergenic 45.0%
ATGATGTGTGTCAGACACTC+GGG - chr1.1:19025991-19026010 None:intergenic 45.0%
CAAAGCAGGAAGGCAAATAC+TGG - chr1.1:19026473-19026492 None:intergenic 45.0%
CAACGTTACTCCATTGGCAT+TGG + chr1.1:19025378-19025397 MS.gene026400:CDS 45.0%
CACGTTAACTGGGGAGATAT+CGG + chr1.1:19025714-19025733 MS.gene026400:CDS 45.0%
CACTGCTGAAAATGATGAGG+AGG + chr1.1:19026199-19026218 MS.gene026400:CDS 45.0%
CATTCTGTAGAGTTGTCCTG+CGG + chr1.1:19026330-19026349 MS.gene026400:CDS 45.0%
CCTGTTCGCTGCCTATATAA+AGG + chr1.1:19026558-19026577 MS.gene026400:CDS 45.0%
CCTTTATATAGGCAGCGAAC+AGG - chr1.1:19026561-19026580 None:intergenic 45.0%
CGAGAATCCTCAAACTTCCT+TGG + chr1.1:19024896-19024915 MS.gene026400:intron 45.0%
CTTCCTGTGTCAGTGTTTCA+TGG + chr1.1:19026104-19026123 MS.gene026400:intron 45.0%
GAGCAAAGTTAAGCCAAGGA+TGG + chr1.1:19026586-19026605 MS.gene026400:CDS 45.0%
GATGGAGTATGATTCTTCGC+TGG - chr1.1:19025657-19025676 None:intergenic 45.0%
GCAAAGACCAAGGAAGTTTG+AGG - chr1.1:19024906-19024925 None:intergenic 45.0%
GCGCAATTTCAATCCTTCAG+TGG - chr1.1:19025820-19025839 None:intergenic 45.0%
GGCAAAAACCATCTGCGATT+AGG - chr1.1:19024398-19024417 None:intergenic 45.0%
GGTTGCAATAGTCGAAAGCT+GGG - chr1.1:19025268-19025287 None:intergenic 45.0%
GGTTTGAAGGTGATGAATCC+AGG - chr1.1:19025578-19025597 None:intergenic 45.0%
GTGTAAAAGAGGACGAGTCA+GGG + chr1.1:19026706-19026725 MS.gene026400:CDS 45.0%
GTTCGCTGCCTATATAAAGG+AGG + chr1.1:19026561-19026580 MS.gene026400:CDS 45.0%
TAGCCATGAAACACTGACAC+AGG - chr1.1:19026110-19026129 None:intergenic 45.0%
TCACCTTCAAACCTTACTCC+TGG + chr1.1:19025585-19025604 MS.gene026400:CDS 45.0%
TGCGCTATCCTAATGAGGAA+GGG + chr1.1:19025835-19025854 MS.gene026400:CDS 45.0%
TGCTATTGCTGGTAGCCATT+TGG + chr1.1:19024688-19024707 MS.gene026400:intron 45.0%
TTCTCGGTCAAACCGTTCAA+AGG - chr1.1:19024882-19024901 None:intergenic 45.0%
TTGCAGATCTAGGAAGTTCG+AGG - chr1.1:19024501-19024520 None:intergenic 45.0%
TTGCGCTATCCTAATGAGGA+AGG + chr1.1:19025834-19025853 MS.gene026400:CDS 45.0%
TTGCTCGGCCTCCTTTATAT+AGG - chr1.1:19026572-19026591 None:intergenic 45.0%
TTGTGAAAAGAAGGACGAGG+AGG - chr1.1:19023420-19023439 None:intergenic 45.0%
TTGTGTAACTGTAGGTGCAC+TGG + chr1.1:19026172-19026191 MS.gene026400:intron 45.0%
! CTCCTCATCATTTTCAGCAG+TGG - chr1.1:19026201-19026220 None:intergenic 45.0%
!! GAATTTGGTTTGTCGATGGC+TGG + chr1.1:19025343-19025362 MS.gene026400:CDS 45.0%
!! GCTCCTTTTCTGGTGAGAAA+AGG - chr1.1:19024550-19024569 None:intergenic 45.0%
!!! ATTTTTTTTTTTTTTGAATT+GGG + chr1.1:19023505-19023524 MS.gene026400:intron 5.0%
AACCACACGTGTCAGTGTAG+CGG - chr1.1:19026026-19026045 None:intergenic 50.0%
ACCTTGTCTTGCAATGCACC+AGG - chr1.1:19025606-19025625 None:intergenic 50.0%
AGATCTCTGATGGGAGACAG+TGG + chr1.1:19026535-19026554 MS.gene026400:CDS 50.0%
AGTGCCATCAGGAACAGTGA+GGG - chr1.1:19025289-19025308 None:intergenic 50.0%
CATAGCAAGGCCCTTCAGTA+CGG - chr1.1:19025503-19025522 None:intergenic 50.0%
CCATGAGAAGCCGTACTGAA+GGG + chr1.1:19025490-19025509 MS.gene026400:CDS 50.0%
CGACACTGAGATGACAACAC+CGG - chr1.1:19026081-19026100 None:intergenic 50.0%
CGATATCTCCCCAGTTAACG+TGG - chr1.1:19025716-19025735 None:intergenic 50.0%
CGCAGGACAACTCTACAGAA+TGG - chr1.1:19026332-19026351 None:intergenic 50.0%
CGTGTAAAAGAGGACGAGTC+AGG + chr1.1:19026705-19026724 MS.gene026400:CDS 50.0%
CTACCAACGAGCAAAGACCA+AGG - chr1.1:19024916-19024935 None:intergenic 50.0%
CTTGCAATGCACCAGGAGTA+AGG - chr1.1:19025599-19025618 None:intergenic 50.0%
GCACCAGGAGTAAGGTTTGA+AGG - chr1.1:19025591-19025610 None:intergenic 50.0%
GCGCTATCCTAATGAGGAAG+GGG + chr1.1:19025836-19025855 MS.gene026400:CDS 50.0%
GGGTTGCAATAGTCGAAAGC+TGG - chr1.1:19025269-19025288 None:intergenic 50.0%
GTTAACTGGGGAGATATCGG+TGG + chr1.1:19025717-19025736 MS.gene026400:CDS 50.0%
TCCTGGTGCATTGCAAGACA+AGG + chr1.1:19025602-19025621 MS.gene026400:CDS 50.0%
TGAGCTGCTTAGAACCAGAG+AGG + chr1.1:19026659-19026678 MS.gene026400:CDS 50.0%
! CTGGCGTCTGGGATTGAAAA+AGG + chr1.1:19025311-19025330 MS.gene026400:CDS 50.0%
! CTTCCTTGGTCTTTGCTCGT+TGG + chr1.1:19024910-19024929 MS.gene026400:intron 50.0%
! TCGCAGATGGTTTTTGCCTG+TGG + chr1.1:19024400-19024419 MS.gene026400:intron 50.0%
!! AGGATTTGGGGCTCCTTTTC+TGG - chr1.1:19024560-19024579 None:intergenic 50.0%
!! CTCGTTGGTAGTGCACCATT+GGG + chr1.1:19024925-19024944 MS.gene026400:intron 50.0%
!!! GCATGGCTCACATTTTGGCT+TGG - chr1.1:19026753-19026772 None:intergenic 50.0%
CAGTGCCATCAGGAACAGTG+AGG - chr1.1:19025290-19025309 None:intergenic 55.0%
CCCTTCAGTACGGCTTCTCA+TGG - chr1.1:19025493-19025512 None:intergenic 55.0%
CGACCTAAGTATGGGCCCAA+TGG - chr1.1:19024943-19024962 None:intergenic 55.0%
CTGTTCCTGATGGCACTGTC+TGG + chr1.1:19025292-19025311 MS.gene026400:CDS 55.0%
GACTTGCAGCACTACCTCTC+TGG - chr1.1:19026676-19026695 None:intergenic 55.0%
GCAACCCTCACTGTTCCTGA+TGG + chr1.1:19025282-19025301 MS.gene026400:CDS 55.0%
GCACCATTGGGCCCATACTT+AGG + chr1.1:19024937-19024956 MS.gene026400:intron 55.0%
GCCATGAGAAGCCGTACTGA+AGG + chr1.1:19025489-19025508 MS.gene026400:CDS 55.0%
GGCCGAGCAAAGTTAAGCCA+AGG + chr1.1:19026582-19026601 MS.gene026400:CDS 55.0%
!! GCTCGTTGGTAGTGCACCAT+TGG + chr1.1:19024924-19024943 MS.gene026400:intron 55.0%
!! TGACACGGTGCTGCAAGTGA+GGG - chr1.1:19026788-19026807 None:intergenic 55.0%
AGACGCCAGACAGTGCCATC+AGG - chr1.1:19025300-19025319 None:intergenic 60.0%
CACACGTGTCAGTGTAGCGG+CGG - chr1.1:19026023-19026042 None:intergenic 60.0%
GATGGCACTGTCTGGCGTCT+GGG + chr1.1:19025300-19025319 MS.gene026400:CDS 60.0%
TGATGGCACTGTCTGGCGTC+TGG + chr1.1:19025299-19025318 MS.gene026400:CDS 60.0%
TGTCAGTGTAGCGGCGGAGT+AGG - chr1.1:19026017-19026036 None:intergenic 60.0%
!! CTGACACGGTGCTGCAAGTG+AGG - chr1.1:19026789-19026808 None:intergenic 60.0%
CGCCGCTACACTGACACGTG+TGG + chr1.1:19026021-19026040 MS.gene026400:intron 65.0%


Chromosome Type Strat End Strand Name
chr1.1 gene 19023414 19026833 19023414 ID=MS.gene026400
chr1.1 mRNA 19023414 19026833 19023414 ID=MS.gene026400.t1;Parent=MS.gene026400
chr1.1 exon 19023414 19023476 19023414 ID=MS.gene026400.t1.exon1;Parent=MS.gene026400.t1
chr1.1 CDS 19023414 19023476 19023414 ID=cds.MS.gene026400.t1;Parent=MS.gene026400.t1
chr1.1 exon 19025231 19025912 19025231 ID=MS.gene026400.t1.exon2;Parent=MS.gene026400.t1
chr1.1 CDS 19025231 19025912 19025231 ID=cds.MS.gene026400.t1;Parent=MS.gene026400.t1
chr1.1 exon 19026186 19026382 19026186 ID=MS.gene026400.t1.exon3;Parent=MS.gene026400.t1
chr1.1 CDS 19026186 19026382 19026186 ID=cds.MS.gene026400.t1;Parent=MS.gene026400.t1
chr1.1 exon 19026423 19026833 19026423 ID=MS.gene026400.t1.exon4;Parent=MS.gene026400.t1
chr1.1 CDS 19026423 19026833 19026423 ID=cds.MS.gene026400.t1;Parent=MS.gene026400.t1
Gene Sequence

>MS.gene026400

ATGCCTCCTCGTCCTTCTTTTCACAAGCTCATTCTCCCTTCATCCCTTCAAACTAGACAATTGGTAACGAGTTTTCTCTTTTTACTCATTCATTTTTTTTTTTTTTGAATTGGGTTTTTGTTTCATGTTTTTGATTGGATTTTATTGATGTTATGATTGTTGTAAGAAAAGGGTTTTTAGGGTTTTGGTTGATTTTTTAGGGTATGTGGCACTTTAACTTATAAACCCTGATACCCCTTTTTTTTATAAAGTTTGGATTTTTTTAGGTTTTGTTTTAAACCCATGATTTTGATCACTGAGTTTGGATTTTCTGTTATGATTCTTGATGAAGGGTAGTGTTTTTTGTTTGATCAGTCGTTGAAAAGTGTTGAAATTTGATTCAGTGTTGTTTAGGTTTTGTGATTTTTCGGGACAGTGTTGAAATTTTGATCACCAGGTTGCTGAGTTGATTTTAGCCCTAAAATTGAATTGGTTGGTTAGTTTGTTTGTGTCTAGTGGCATTCTTTGAATGAGAAATTCTTGTGGCGTTGAAATTGAATTTGCTATCATATCGATTACTTGATAAAATTTATGCTCCTTGATGTTTTCCTTAAAATCATTAATATATGTGGTTCAGTGTATTAGAAAGAATTGATCTTTTTTTATTTTTTATTGAGAACTAGAAGTGTCACCTGTTTTAAGTGAAAGAGAAGAACATATAACAGAGTGAACAGATTTTTATGCTTCATATTTCTCCAAATGTGTTTTAATTGAGACTATCATATTGGAAATTTATCTATGTGTAGAAATTCTTTAGTGTAGTTACAAATTCTTGCACTTAGTAAGTATGACCTTTGGATTGTTATTGCCAGTAGCAATTTGGAAATGTGTCATTTTTTAATGAATCTCCATTTTCAGCATGGTAGTTAAATATCACATATTGACTTATTGAAATCATACAATTTTAAAATGTTTTGTGATCACTGCGATTCAGATCTCAAACCTAATCGCAGATGGTTTTTGCCTGTGGTCGTGTGTGTTAATTTCAGGCCGAGTATATGACCCCTGTTAAAAACAACGCACCTTTGAATGAGTGACTAAAAATCCTCGAACTTCCTAGATCTGCAAATGTAAAGCCTCTTCTCACCAGAAAACCTTTTCTCACCAGAAAAGGAGCCCCAAATCCTTGAACTTCTTTTGATCTTTTTAATTTTGGTAAAAGAGGAGCCGCAAATCCTCAAATTTCCTAGACATGCAAATGAAAAACCTCTTCTATTAAGTATGGAAAGTTGGATTGCTATTGCTGGTAGCCATTTGGAAATGAGTAGTTTTTTTTTAACGAATCTCCGTTTTTAGCATGGTAGTTAGTATCACACATTGAATCATTTAAATCATATATTTTTAAGATGTTTTGTGATCTCTGCGAGATATCGCACCTAATCACTGATGGTTTTTGCCGAGTACATGACCTGTTAAAAAAAACGCACCTTTGAACGGTTTGACCGAGAATCCTCAAACTTCCTTGGTCTTTGCTCGTTGGTAGTGCACCATTGGGCCCATACTTAGGTCGAACCAATTTATTTAATAATAATAATCAAATAAAAATTCAAAAACGATCCAACAAAAATACTTTTATGCTTATGAATTTAAGTTTACATAAGGATTTTATGTGTTATTTAAATGCTCTCTTTGTGAATTATGTACTATCCGTGTTATGATTCCATGTTTATGATTTCATTGTCTTTTTGATTCCGAGTCAAATCTCGAGTTTAAAATCTTCAGTCATTTATTATGAGCATTACTAATATTTGGATGATCAATGTTATTTTCAATTGCAGAGGATTCCAGATAATTTTCTTAGGAAATATGGGGCCCAGCTTTCGACTATTGCAACCCTCACTGTTCCTGATGGCACTGTCTGGCGTCTGGGATTGAAAAAGGTTGACAACCGAATTTGGTTTGTCGATGGCTGGCAAGATTTTGTTCAACGTTACTCCATTGGCATTGGATACTTTCTAGTATTCACTTATGAAGGAAATTCAAATTTCATTGTTCATATCTTTAATATGAGTACTGCGGAGTTAAACTATCAATCAGCCATGAGAAGCCGTACTGAAGGGCCTTGCTATGCAAATTATCATCCTATTTTTGAAGACATTGAAGATATCGACTCCTTTGAATTCCTGGATTCATCACCTTCAAACCTTACTCCTGGTGCATTGCAAGACAAGGTTTTTAGTGGATCTTTGGATCAACTAACACCAGCGAAGAATCATACTCCATCATTGCAGAATTTGTTTAATGGGGGGTCTAAACTCAACCACGTTAACTGGGGAGATATCGGTGGTACTCTTTCTTCAAAGAGTGCCATTCAGTCAACCAGAGATATAGGTGTTCAGTTCAATGCTAATGAGTTTAAAAAGTCCACTGAAGGATTGAAATTGCGCTATCCTAATGAGGAAGGGGTTAATAATACTGATACGAAGAAAACTTCAAGAAAGAAGCGGAAATCAGATCCAAGTAAGCTCTTTTAGATAAGTTTTTCTTCTCTTTCTATTGTACTACGTAGCACTGACATTTTAGATCAAAGGCGTGCCCGAGTGTCTGACACACATCATTGTCCTACTCCGCCGCTACACTGACACGTGTGGTTACATTCAAATATTTCACCTTTTGAAATGATGACCGGTGTTGTCATCTCAGTGTCGTGTCTTCCTGTGTCAGTGTTTCATGGCTATTATCTAGTAACATAAAAAATTAATTTTGTCATCAATTTAATTTGTGTAACTGTAGGTGCACTGGAAGCCACTGCTGAAAATGATGAGGAGGCAGAGCGCTATCGATTCTATGAAAGTGCGTCAGCAAGAAAAAGAACTGTAACAGCAGAAGAAAGAGAAAGGGCAATTAATGAGTCAAAGACTTTTGAACCAACCAATCCATTCTGTAGAGTTGTCCTGCGGCCCTCTTATTTATATAGAGGATGTATAATGGTGAGATATTGAATTCAATTTTTTTGATATTTACCTTTAGTCTTCTTCGACATTTCGTGTTGCGTACTCAGCTCGTGTTTCTGTTTTCCAGTATTTGCCTTCCTGCTTTGCAGAAAAGAATTTGAACGGTGTTTCAGGATTCATTAAGCTTCAGATCTCTGATGGGAGACAGTGGCCTGTTCGCTGCCTATATAAAGGAGGCCGAGCAAAGTTAAGCCAAGGATGGTATGAATTTACATTAGAGAACAATTTAGGGGAAGGCGATATCTGTGTTTTTGAGCTGCTTAGAACCAGAGAGGTAGTGCTGCAAGTCACTTTGTTTCGTGTAAAAGAGGACGAGTCAGGGTTATTCAACCCTTCTTCACAACCAAGCCAAAATGTGAGCCATGCAAAAATGTTGAACCCTCACTTGCAGCACCGTGTCAGCTCAACTAAATCAGCTAAAAATTAG
Protein sequence

>MS.gene026400.t1

MPPRPSFHKLILPSSLQTRQLRIPDNFLRKYGAQLSTIATLTVPDGTVWRLGLKKVDNRIWFVDGWQDFVQRYSIGIGYFLVFTYEGNSNFIVHIFNMSTAELNYQSAMRSRTEGPCYANYHPIFEDIEDIDSFEFLDSSPSNLTPGALQDKVFSGSLDQLTPAKNHTPSLQNLFNGGSKLNHVNWGDIGGTLSSKSAIQSTRDIGVQFNANEFKKSTEGLKLRYPNEEGVNNTDTKKTSRKKRKSDPSALEATAENDEEAERYRFYESASARKRTVTAEERERAINESKTFEPTNPFCRVVLRPSYLYRGCIMSSSTFRVAYSARVSVFQYLPSCFAEKNLNGVSGFIKLQISDGRQWPVRCLYKGGRAKLSQGWYEFTLENNLGEGDICVFELLRTREVVLQVTLFRVKEDESGLFNPSSQPSQNVSHAKMLNPHLQHRVSSTKSAKN