Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026402.t1 | XP_024632331.1 | 72.5 | 400 | 64 | 2 | 26 | 425 | 17 | 370 | 1.50E-123 | 453 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026402.t1 | Q8L3W1 | 35.4 | 395 | 180 | 7 | 26 | 416 | 16 | 339 | 1.1e-50 | 202.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026402.t1 | A0A072VG30 | 72.5 | 400 | 64 | 2 | 26 | 425 | 17 | 370 | 1.1e-123 | 453.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene026402.t1 | TF | B3 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026402.t1 | MTR_1g034210 | 78.500 | 400 | 40 | 2 | 26 | 425 | 17 | 370 | 0.0 | 603 |
| MS.gene026402.t1 | MTR_1g034210 | 76.271 | 354 | 38 | 2 | 26 | 379 | 17 | 324 | 0.0 | 515 |
| MS.gene026402.t1 | MTR_1g034240 | 58.095 | 420 | 106 | 10 | 31 | 421 | 22 | 400 | 8.83e-142 | 412 |
| MS.gene026402.t1 | MTR_4g068320 | 42.381 | 420 | 173 | 10 | 31 | 423 | 21 | 398 | 1.13e-100 | 306 |
| MS.gene026402.t1 | MTR_3g005480 | 44.444 | 90 | 50 | 0 | 31 | 120 | 36 | 125 | 4.20e-21 | 92.8 |
| MS.gene026402.t1 | MTR_3g005480 | 35.000 | 120 | 67 | 3 | 300 | 414 | 148 | 261 | 1.68e-11 | 64.7 |
| MS.gene026402.t1 | MTR_5g070440 | 43.689 | 103 | 55 | 2 | 23 | 123 | 29 | 130 | 4.22e-21 | 92.8 |
| MS.gene026402.t1 | MTR_5g070440 | 34.266 | 143 | 82 | 5 | 274 | 413 | 135 | 268 | 1.02e-11 | 65.5 |
| MS.gene026402.t1 | MTR_3g005490 | 44.444 | 90 | 50 | 0 | 31 | 120 | 36 | 125 | 5.52e-20 | 89.4 |
| MS.gene026402.t1 | MTR_3g005440 | 45.977 | 87 | 45 | 1 | 28 | 112 | 32 | 118 | 9.83e-18 | 85.1 |
| MS.gene026402.t1 | MTR_3g005440 | 48.750 | 80 | 41 | 0 | 31 | 110 | 257 | 336 | 2.23e-14 | 75.1 |
| MS.gene026402.t1 | MTR_3g005495 | 43.396 | 106 | 56 | 3 | 20 | 123 | 19 | 122 | 2.17e-17 | 84.3 |
| MS.gene026402.t1 | MTR_3g005495 | 42.500 | 80 | 46 | 0 | 31 | 110 | 258 | 337 | 1.52e-14 | 75.9 |
| MS.gene026402.t1 | MTR_3g005420 | 45.263 | 95 | 50 | 1 | 31 | 123 | 304 | 398 | 7.75e-17 | 82.8 |
| MS.gene026402.t1 | MTR_3g005420 | 37.363 | 91 | 56 | 1 | 31 | 120 | 55 | 145 | 2.68e-14 | 75.1 |
| MS.gene026402.t1 | MTR_3g005420 | 34.167 | 120 | 68 | 4 | 298 | 413 | 424 | 536 | 7.22e-11 | 64.3 |
| MS.gene026402.t1 | MTR_3g005460 | 44.944 | 89 | 47 | 1 | 31 | 117 | 40 | 128 | 2.13e-16 | 81.6 |
| MS.gene026402.t1 | MTR_3g005460 | 46.914 | 81 | 42 | 1 | 31 | 110 | 277 | 357 | 1.16e-15 | 79.3 |
| MS.gene026402.t1 | MTR_3g061340 | 38.947 | 95 | 55 | 2 | 31 | 122 | 25 | 119 | 1.69e-15 | 76.6 |
| MS.gene026402.t1 | MTR_3g061320 | 41.379 | 87 | 49 | 1 | 31 | 115 | 25 | 111 | 5.53e-15 | 75.5 |
| MS.gene026402.t1 | MTR_3g005420 | 37.363 | 91 | 56 | 1 | 31 | 120 | 36 | 126 | 1.71e-14 | 75.5 |
| MS.gene026402.t1 | MTR_3g005420 | 34.167 | 120 | 68 | 4 | 298 | 413 | 370 | 482 | 6.17e-11 | 64.7 |
| MS.gene026402.t1 | MTR_3g061350 | 29.508 | 183 | 108 | 5 | 26 | 204 | 18 | 183 | 3.37e-14 | 73.2 |
| MS.gene026402.t1 | MTR_3g061350 | 25.668 | 187 | 103 | 7 | 236 | 412 | 124 | 284 | 1.34e-11 | 65.5 |
| MS.gene026402.t1 | MTR_3g061290 | 33.884 | 121 | 70 | 2 | 31 | 149 | 25 | 137 | 3.47e-14 | 71.6 |
| MS.gene026402.t1 | MTR_7g050710 | 38.298 | 94 | 58 | 0 | 31 | 124 | 28 | 121 | 4.01e-14 | 73.6 |
| MS.gene026402.t1 | MTR_1g108780 | 34.746 | 118 | 68 | 4 | 306 | 421 | 188 | 298 | 4.11e-14 | 74.3 |
| MS.gene026402.t1 | MTR_3g061370 | 28.415 | 183 | 110 | 5 | 26 | 204 | 15 | 180 | 1.15e-13 | 71.6 |
| MS.gene026402.t1 | MTR_3g061370 | 25.134 | 187 | 104 | 6 | 236 | 412 | 121 | 281 | 2.85e-12 | 67.4 |
| MS.gene026402.t1 | MTR_5g044670 | 37.805 | 82 | 51 | 0 | 32 | 113 | 32 | 113 | 1.19e-13 | 72.0 |
| MS.gene026402.t1 | MTR_7g050590 | 38.554 | 83 | 49 | 1 | 32 | 112 | 2 | 84 | 1.39e-13 | 71.2 |
| MS.gene026402.t1 | MTR_3g061330 | 30.055 | 183 | 106 | 6 | 26 | 204 | 18 | 182 | 3.23e-13 | 69.7 |
| MS.gene026402.t1 | MTR_1g035460 | 31.405 | 121 | 72 | 2 | 32 | 149 | 2 | 114 | 4.03e-13 | 70.9 |
| MS.gene026402.t1 | MTR_1g035460 | 33.913 | 115 | 67 | 4 | 308 | 420 | 187 | 294 | 6.76e-12 | 67.0 |
| MS.gene026402.t1 | MTR_3g061310 | 38.298 | 94 | 54 | 2 | 26 | 115 | 18 | 111 | 4.19e-13 | 69.7 |
| MS.gene026402.t1 | MTR_7g050560 | 38.554 | 83 | 49 | 1 | 32 | 112 | 29 | 111 | 4.69e-13 | 70.1 |
| MS.gene026402.t1 | MTR_7g050580 | 40.000 | 85 | 49 | 1 | 32 | 114 | 29 | 113 | 1.25e-12 | 68.9 |
| MS.gene026402.t1 | MTR_8g103940 | 28.169 | 213 | 127 | 9 | 226 | 418 | 130 | 336 | 1.69e-12 | 69.3 |
| MS.gene026402.t1 | MTR_3g098790 | 31.967 | 122 | 77 | 2 | 298 | 413 | 178 | 299 | 3.38e-12 | 67.8 |
| MS.gene026402.t1 | MTR_3g098790 | 32.773 | 119 | 64 | 1 | 32 | 150 | 29 | 131 | 5.54e-12 | 67.0 |
| MS.gene026402.t1 | MTR_3g061300 | 32.143 | 112 | 65 | 5 | 305 | 411 | 17 | 122 | 3.67e-12 | 63.5 |
| MS.gene026402.t1 | MTR_7g050720 | 39.241 | 79 | 48 | 0 | 32 | 110 | 26 | 104 | 3.79e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026402.t1 | AT3G18990 | 40.609 | 394 | 161 | 9 | 26 | 416 | 16 | 339 | 9.36e-84 | 260 |
| MS.gene026402.t1 | AT3G18990 | 40.506 | 395 | 160 | 10 | 26 | 416 | 16 | 339 | 2.51e-82 | 258 |
| MS.gene026402.t1 | AT1G49480 | 57.647 | 170 | 65 | 5 | 248 | 416 | 61 | 224 | 4.22e-53 | 177 |
| MS.gene026402.t1 | AT1G49480 | 57.647 | 170 | 65 | 5 | 248 | 416 | 61 | 224 | 4.22e-53 | 177 |
| MS.gene026402.t1 | AT1G49480 | 57.647 | 170 | 65 | 5 | 248 | 416 | 61 | 224 | 4.22e-53 | 177 |
| MS.gene026402.t1 | AT4G01580 | 38.384 | 99 | 58 | 2 | 17 | 112 | 30 | 128 | 6.88e-15 | 73.2 |
| MS.gene026402.t1 | AT3G18960 | 36.559 | 93 | 58 | 1 | 17 | 108 | 30 | 122 | 1.31e-13 | 70.1 |
| MS.gene026402.t1 | AT3G18960 | 36.559 | 93 | 58 | 1 | 17 | 108 | 30 | 122 | 2.53e-13 | 68.9 |
| MS.gene026402.t1 | AT3G18960 | 38.462 | 78 | 48 | 0 | 31 | 108 | 8 | 85 | 2.15e-12 | 65.5 |
Find 92 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACATTACGGCCAAGGATTTC+TGG | 0.187282 | 1.1:-19005699 | None:intergenic |
| GCAAATTTGAAGGGTGTTTC+AGG | 0.187865 | 1.1:+19008779 | MS.gene026402:CDS |
| TATCGACTCCTTTGATTTCC+TGG | 0.264885 | 1.1:+19006453 | MS.gene026402:CDS |
| TTTACACAAGAGAACGGTTT+AGG | 0.281466 | 1.1:+19008899 | MS.gene026402:CDS |
| CAGTATTTGCCTACCAGATT+TGG | 0.288300 | 1.1:+19008755 | MS.gene026402:intron |
| CTCCTTTGATTTCCTGGATT+CGG | 0.304226 | 1.1:+19006459 | MS.gene026402:CDS |
| TATGCATCCCCTATATAAAT+AGG | 0.310663 | 1.1:-19008642 | None:intergenic |
| CTTCAAATTTGCTCCAAATC+TGG | 0.314432 | 1.1:-19008768 | None:intergenic |
| CCAACAAAGACAAGAAAATA+AGG | 0.331796 | 1.1:+19006564 | MS.gene026402:CDS |
| TCTTGCAGACGCACGTTCAT+AGG | 0.341018 | 1.1:-19008519 | None:intergenic |
| CTATTCCTGGCGGCACCGTC+TGG | 0.365680 | 1.1:+19006194 | MS.gene026402:CDS |
| GCGAGCCTCCTATTTATATA+GGG | 0.371848 | 1.1:+19008634 | MS.gene026402:CDS |
| TTACACAAGAGAACGGTTTA+GGG | 0.383205 | 1.1:+19008900 | MS.gene026402:CDS |
| GTCGCAACTGTCACTATTCC+TGG | 0.396303 | 1.1:+19006181 | MS.gene026402:CDS |
| TTTATTCAACGCTACTCAAT+TGG | 0.396344 | 1.1:+19006274 | MS.gene026402:CDS |
| CATAGAAAGGCTCTTCAGTC+TGG | 0.399131 | 1.1:-19006396 | None:intergenic |
| TGCGAGCCTCCTATTTATAT+AGG | 0.401271 | 1.1:+19008633 | MS.gene026402:CDS |
| TTTATATAGGGGATGCATAA+TGG | 0.404335 | 1.1:+19008646 | MS.gene026402:CDS |
| CAAGGATTCTGCTGGATGTA+TGG | 0.411184 | 1.1:+19006513 | MS.gene026402:CDS |
| CAAGAAAACTTCAAGAAAGA+AGG | 0.440243 | 1.1:+19008144 | MS.gene026402:CDS |
| TACTTTGTTTCGTCTAAAAG+AGG | 0.450484 | 1.1:+19008979 | MS.gene026402:CDS |
| GGATCCTTTCTTCCCATGAC+TGG | 0.450600 | 1.1:+19005610 | None:intergenic |
| GTGTAAATTCGTACCATCCT+TGG | 0.456711 | 1.1:-19008883 | None:intergenic |
| GGTTTGAAGGTGCCGAATCC+AGG | 0.469504 | 1.1:-19006471 | None:intergenic |
| AATGCACCAGTAGGGTTTGA+AGG | 0.471364 | 1.1:-19006484 | None:intergenic |
| GGATCCTTCTGCCTTGCTCT+AGG | 0.475314 | 1.1:+19005631 | MS.gene026402:CDS |
| CAGATTTGGAGCAAATTTGA+AGG | 0.476313 | 1.1:+19008769 | MS.gene026402:CDS |
| GGCGGCACCGTCTGGCGTCT+AGG | 0.484238 | 1.1:+19006202 | MS.gene026402:CDS |
| TGCTTTGCAATGCACCAGTA+GGG | 0.484811 | 1.1:-19006492 | None:intergenic |
| CGTCTAGGATTGAAGAAGGT+TGG | 0.492329 | 1.1:+19006217 | MS.gene026402:CDS |
| CAACGCTACTCAATTGGCAT+TGG | 0.496965 | 1.1:+19006280 | MS.gene026402:CDS |
| AACTTGCAACACTACATCTC+TGG | 0.504545 | 1.1:-19008957 | None:intergenic |
| AGAGAACGGTTTAGGGGAAG+GGG | 0.514068 | 1.1:+19008907 | MS.gene026402:CDS |
| TTGTGGAACTGCAGGTGCAC+AGG | 0.514227 | 1.1:+19006894 | MS.gene026402:intron |
| TTGTGGAACTGCAGGTGCAC+AGG | 0.514227 | 1.1:+19008075 | MS.gene026402:intron |
| TGTTTCCTCAGAAAATTATC+CGG | 0.517233 | 1.1:-19006139 | None:intergenic |
| TGTCAGATGAAGAAAGAGAA+AGG | 0.518068 | 1.1:+19008555 | MS.gene026402:CDS |
| AGACGCCAGACGGTGCCGCC+AGG | 0.521079 | 1.1:-19006199 | None:intergenic |
| CTAACGCAGTGCTGCAAGTG+AGG | 0.521510 | 1.1:-19009008 | None:intergenic |
| GCCTTGCGGCCAGAAATCCT+TGG | 0.521606 | 1.1:+19005690 | MS.gene026402:CDS |
| ACAAGACAGTAAGGATTAGT+TGG | 0.522215 | 1.1:-19008605 | None:intergenic |
| TAATTATAGTCTTCATAGAA+AGG | 0.526871 | 1.1:-19006409 | None:intergenic |
| AAGAAAACTTCAAGAAAGAA+GGG | 0.528573 | 1.1:+19008145 | MS.gene026402:CDS |
| AAGAGAACGGTTTAGGGGAA+GGG | 0.530709 | 1.1:+19008906 | MS.gene026402:CDS |
| TTGCAAAGCAAGGATTCTGC+TGG | 0.532722 | 1.1:+19006505 | MS.gene026402:CDS |
| AGGCAGAAGGATCCAGTCAT+GGG | 0.534665 | 1.1:-19005622 | None:intergenic |
| TTGCTTTGCAATGCACCAGT+AGG | 0.535055 | 1.1:-19006493 | None:intergenic |
| CAAGAGAACGGTTTAGGGGA+AGG | 0.536429 | 1.1:+19008905 | MS.gene026402:CDS |
| TGTTGGCTATGATTCTCCGC+TGG | 0.543021 | 1.1:-19006547 | None:intergenic |
| AGCCATCCACAAAACAAATA+CGG | 0.548306 | 1.1:-19006243 | None:intergenic |
| AGATTTGGAGCAAATTTGAA+GGG | 0.548691 | 1.1:+19008770 | MS.gene026402:CDS |
| GCCAAGGATTTCTGGCCGCA+AGG | 0.551599 | 1.1:-19005691 | None:intergenic |
| TCGGCACCTTCAAACCCTAC+TGG | 0.554321 | 1.1:+19006478 | MS.gene026402:CDS |
| GTCAGATGAAGAAAGAGAAA+GGG | 0.559696 | 1.1:+19008556 | MS.gene026402:CDS |
| AAGAGAAAGGGCAATGAATG+AGG | 0.560927 | 1.1:+19008568 | MS.gene026402:CDS |
| CGCAGACTAACAAGACAGTA+AGG | 0.562349 | 1.1:-19008614 | None:intergenic |
| GCTGCCTTGATGACAAAGGC+CGG | 0.563135 | 1.1:+19008849 | MS.gene026402:CDS |
| AAGGCAGAAGGATCCAGTCA+TGG | 0.572576 | 1.1:-19005623 | None:intergenic |
| TACTATTCACATACGAAGGA+AGG | 0.576020 | 1.1:+19006311 | MS.gene026402:CDS |
| ACGCCACTGTTTCTCACCAT+CGG | 0.581074 | 1.1:-19008822 | None:intergenic |
| TTCTTATGCTCGTTGCCTTG+CGG | 0.583101 | 1.1:+19005676 | MS.gene026402:CDS |
| CAGTTGCGACAGTCGAAAGT+TGG | 0.587358 | 1.1:-19006168 | None:intergenic |
| CATAGTTTAACTCAGTAGTA+CGG | 0.587876 | 1.1:-19006357 | None:intergenic |
| CTGGCGTCTAGGATTGAAGA+AGG | 0.588061 | 1.1:+19006213 | MS.gene026402:CDS |
| ATTCCGCTTCAGACATCCGA+TGG | 0.591154 | 1.1:+19008806 | MS.gene026402:CDS |
| TACTGGTGCATTGCAAAGCA+AGG | 0.593014 | 1.1:+19006495 | MS.gene026402:CDS |
| TGTGCACAACATTACGGCCA+AGG | 0.593452 | 1.1:-19005707 | None:intergenic |
| ACAGGTAAGTTCCTAGAGCA+AGG | 0.595607 | 1.1:-19005642 | None:intergenic |
| AAATTTGCTCCAAATCTGGT+AGG | 0.596789 | 1.1:-19008764 | None:intergenic |
| CGAGCCTCCTATTTATATAG+GGG | 0.597293 | 1.1:+19008635 | MS.gene026402:CDS |
| AGTTCCTAGAGCAAGGCAGA+AGG | 0.600350 | 1.1:-19005635 | None:intergenic |
| TACGAATTTACACAAGAGAA+CGG | 0.605728 | 1.1:+19008893 | MS.gene026402:CDS |
| CTCCACTGAAAATGATGAGG+AGG | 0.606101 | 1.1:+19006921 | MS.gene026402:CDS |
| CTCCACTGAAAATGATGAGG+AGG | 0.606101 | 1.1:+19008102 | MS.gene026402:CDS |
| TAACGCAGTGCTGCAAGTGA+GGG | 0.609733 | 1.1:-19009007 | None:intergenic |
| AGAAAACTTCAAGAAAGAAG+CGG | 0.610439 | 1.1:+19006593 | MS.gene026402:CDS |
| AGAAAACTTCAAGAAAGAAG+CGG | 0.610439 | 1.1:+19006965 | MS.gene026402:CDS |
| TGCCGAATCCAGGAAATCAA+AGG | 0.612101 | 1.1:-19006461 | None:intergenic |
| GCATCCCCTATATAAATAGG+AGG | 0.614656 | 1.1:-19008639 | None:intergenic |
| CTTCAATCCTAGACGCCAGA+CGG | 0.620774 | 1.1:-19006209 | None:intergenic |
| TCACCATCGGATGTCTGAAG+CGG | 0.621327 | 1.1:-19008809 | None:intergenic |
| CAAGAAAGAAGCGGAAATCG+TGG | 0.628100 | 1.1:+19006602 | MS.gene026402:CDS |
| CATCCGATGGTGAGAAACAG+TGG | 0.644228 | 1.1:+19008819 | MS.gene026402:CDS |
| AGCCTCCACTGAAAATGATG+AGG | 0.645254 | 1.1:+19006918 | MS.gene026402:CDS |
| AGCCTCCACTGAAAATGATG+AGG | 0.645254 | 1.1:+19008099 | MS.gene026402:CDS |
| GTTCGCTGCCTTGATGACAA+AGG | 0.645710 | 1.1:+19008845 | MS.gene026402:CDS |
| TTACTACTATTCACATACGA+AGG | 0.656130 | 1.1:+19006307 | MS.gene026402:CDS |
| ATAAGAACAGCGCACAACAC+AGG | 0.665326 | 1.1:-19005660 | None:intergenic |
| TACACAAGAGAACGGTTTAG+GGG | 0.668422 | 1.1:+19008901 | MS.gene026402:CDS |
| CAAGAAAGAAGGGAAAATCG+CGG | 0.697880 | 1.1:+19008155 | MS.gene026402:CDS |
| TATGGATCAACTGATACCAG+CGG | 0.714314 | 1.1:+19006531 | MS.gene026402:CDS |
| GCAACTGTCACTATTCCTGG+CGG | 0.770854 | 1.1:+19006184 | MS.gene026402:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAATAAATTGGTT+TGG | - | chr1.1:19005883-19005902 | None:intergenic | 10.0% |
| !! | TCTCTATTAAATAAATAAAT+TGG | - | chr1.1:19005888-19005907 | None:intergenic | 10.0% |
| !!! | AAAAAAAATAGTTTAAAATG+TGG | - | chr1.1:19007308-19007327 | None:intergenic | 10.0% |
| !!! | AATTTTTTGATATTTTTCTT+TGG | + | chr1.1:19008684-19008703 | MS.gene026402:intron | 10.0% |
| !!! | ACATTTTAAACTATTTTTTT+TGG | + | chr1.1:19007307-19007326 | MS.gene026402:intron | 10.0% |
| !! | TTGAAGTTTGAATAAAAATA+TGG | + | chr1.1:19007902-19007921 | MS.gene026402:intron | 15.0% |
| !! | ATTGCTTCTGATAAAAAAAT+TGG | - | chr1.1:19007772-19007791 | None:intergenic | 20.0% |
| !! | ATTGTCATCAATATAATTTG+TGG | + | chr1.1:19006877-19006896 | MS.gene026402:intron | 20.0% |
| !! | CAAATTTGATTACTGAAAAA+TGG | - | chr1.1:19007636-19007655 | None:intergenic | 20.0% |
| !! | TAATTATAGTCTTCATAGAA+AGG | - | chr1.1:19006412-19006431 | None:intergenic | 20.0% |
| !! | TGTATAATTAAGAAAGTTGT+TGG | - | chr1.1:19007468-19007487 | None:intergenic | 20.0% |
| !! | TTAATTATACAGAGAAAGAA+TGG | + | chr1.1:19007477-19007496 | MS.gene026402:intron | 20.0% |
| !!! | AATATTATTTTCAATTGCAG+AGG | + | chr1.1:19006113-19006132 | MS.gene026402:intron | 20.0% |
| !!! | CATTTTTCAGTAATCAAATT+TGG | + | chr1.1:19007634-19007653 | MS.gene026402:intron | 20.0% |
| !!! | GACTATAATTATGTTTTTGA+AGG | + | chr1.1:19006421-19006440 | MS.gene026402:CDS | 20.0% |
| !!! | TATTTCACGTTTTCAAATTA+CGG | + | chr1.1:19006773-19006792 | MS.gene026402:intron | 20.0% |
| !!! | TATTTCACGTTTTCAAATTA+TGG | + | chr1.1:19006773-19006792 | MS.gene026402:intron | 20.0% |
| ! | AAAACTAAAAACCTGATAAC+CGG | - | chr1.1:19007951-19007970 | None:intergenic | 25.0% |
| ! | AAGAAAACTTCAAGAAAGAA+GGG | + | chr1.1:19006592-19006611 | MS.gene026402:CDS | 25.0% |
| ! | ATTGTCATCAGAATAATTTG+TGG | + | chr1.1:19008422-19008441 | MS.gene026402:intron | 25.0% |
| ! | TATGAGCATTTACTAACATT+TGG | + | chr1.1:19006084-19006103 | MS.gene026402:intron | 25.0% |
| ! | TCAAACACTCTTTCAATTAT+TGG | - | chr1.1:19007993-19008012 | None:intergenic | 25.0% |
| ! | TCAGTAATCAAATTTGGATT+TGG | + | chr1.1:19007640-19007659 | MS.gene026402:intron | 25.0% |
| ! | TGTGCTCTATTTATTTGATT+TGG | - | chr1.1:19007605-19007624 | None:intergenic | 25.0% |
| ! | TTTACTATACTATGTAGCAT+TGG | + | chr1.1:19006664-19006683 | MS.gene026402:intron | 25.0% |
| !! | TATTTCACGTTTTCAAACTA+CGG | + | chr1.1:19007136-19007155 | MS.gene026402:intron | 25.0% |
| !!! | AAACTATTTTTTTTGGCTAC+CGG | + | chr1.1:19007314-19007333 | MS.gene026402:intron | 25.0% |
| !!! | GTTTGAGATTAATGTTCTTT+TGG | + | chr1.1:19007822-19007841 | MS.gene026402:intron | 25.0% |
| !!! | GTTTTAAAAAAGTGATGATG+TGG | + | chr1.1:19007966-19007985 | MS.gene026402:intron | 25.0% |
| !!! | TTTTTTCCTCTTTTTGATTC+TGG | + | chr1.1:19006029-19006048 | MS.gene026402:intron | 25.0% |
| AACATCACAAACTTGTCAAA+TGG | + | chr1.1:19007535-19007554 | MS.gene026402:intron | 30.0% | |
| ACATCACAAACTTGTCAAAT+GGG | + | chr1.1:19007536-19007555 | MS.gene026402:intron | 30.0% | |
| AGAAAACTTCAAGAAAGAAG+CGG | + | chr1.1:19006593-19006612 | MS.gene026402:CDS | 30.0% | |
| CAAGAAAACTTCAAGAAAGA+AGG | + | chr1.1:19006591-19006610 | MS.gene026402:CDS | 30.0% | |
| CATAGTTTAACTCAGTAGTA+CGG | - | chr1.1:19006360-19006379 | None:intergenic | 30.0% | |
| CCAACAAAGACAAGAAAATA+AGG | + | chr1.1:19006564-19006583 | MS.gene026402:CDS | 30.0% | |
| GCAGATGAGATAATTAAAGA+TGG | + | chr1.1:19007719-19007738 | MS.gene026402:intron | 30.0% | |
| TACGAATTTACACAAGAGAA+CGG | + | chr1.1:19008893-19008912 | MS.gene026402:CDS | 30.0% | |
| TATGCATCCCCTATATAAAT+AGG | - | chr1.1:19008645-19008664 | None:intergenic | 30.0% | |
| TCACTGTGTAAGTAAATAAC+CGG | - | chr1.1:19007336-19007355 | None:intergenic | 30.0% | |
| TGTTTCCTCAGAAAATTATC+CGG | - | chr1.1:19006142-19006161 | None:intergenic | 30.0% | |
| TTACTACTATTCACATACGA+AGG | + | chr1.1:19006307-19006326 | MS.gene026402:CDS | 30.0% | |
| TTTATATAGGGGATGCATAA+TGG | + | chr1.1:19008646-19008665 | MS.gene026402:CDS | 30.0% | |
| TTTATTCAACGCTACTCAAT+TGG | + | chr1.1:19006274-19006293 | MS.gene026402:CDS | 30.0% | |
| TTTGTGATGTTGAAGCTTAA+TGG | - | chr1.1:19007526-19007545 | None:intergenic | 30.0% | |
| ! | AATATAATTTGTGGAACTGC+AGG | + | chr1.1:19006886-19006905 | MS.gene026402:intron | 30.0% |
| ! | AGATTTGGAGCAAATTTGAA+GGG | + | chr1.1:19008770-19008789 | MS.gene026402:CDS | 30.0% |
| ! | AGTTTAAAATGTGGATGACT+TGG | - | chr1.1:19007299-19007318 | None:intergenic | 30.0% |
| ! | ATTAAGAAAGTTGTTGGTTG+TGG | - | chr1.1:19007462-19007481 | None:intergenic | 30.0% |
| ! | ATTAGTTTCATCATGAGAGA+TGG | + | chr1.1:19007849-19007868 | MS.gene026402:intron | 30.0% |
| ! | CTTCTTTCTTGAAGTTTTCT+TGG | - | chr1.1:19006593-19006612 | None:intergenic | 30.0% |
| ! | TACTTTGTTTCGTCTAAAAG+AGG | + | chr1.1:19008979-19008998 | MS.gene026402:CDS | 30.0% |
| !! | ATAATTTTCTGAGGAAACAC+GGG | + | chr1.1:19006143-19006162 | MS.gene026402:CDS | 30.0% |
| !! | GATAATTTTCTGAGGAAACA+CGG | + | chr1.1:19006142-19006161 | MS.gene026402:CDS | 30.0% |
| !! | TTGTGCAATTCTTTGCTTTT+TGG | + | chr1.1:19005829-19005848 | MS.gene026402:intron | 30.0% |
| !!! | CCTTATTTTCTTGTCTTTGT+TGG | - | chr1.1:19006567-19006586 | None:intergenic | 30.0% |
| !!! | GCTGTGATATAGGTTTTTTA+TGG | + | chr1.1:19007697-19007716 | MS.gene026402:intron | 30.0% |
| !!! | TGTGCAATTCTTTGCTTTTT+GGG | + | chr1.1:19005830-19005849 | MS.gene026402:intron | 30.0% |
| AATGAGCCAGAATCAAAAAG+AGG | - | chr1.1:19006038-19006057 | None:intergenic | 35.0% | |
| AGCCATCCACAAAACAAATA+CGG | - | chr1.1:19006246-19006265 | None:intergenic | 35.0% | |
| CAGAATTGTGCACAACATTA+CGG | - | chr1.1:19005716-19005735 | None:intergenic | 35.0% | |
| CTCTCATGATGAAACTAATG+AGG | - | chr1.1:19007848-19007867 | None:intergenic | 35.0% | |
| GTCAGATGAAGAAAGAGAAA+GGG | + | chr1.1:19008556-19008575 | MS.gene026402:CDS | 35.0% | |
| TACTATTCACATACGAAGGA+AGG | + | chr1.1:19006311-19006330 | MS.gene026402:CDS | 35.0% | |
| TCAAAGAACCTGCGTTAATT+GGG | + | chr1.1:19007563-19007582 | MS.gene026402:intron | 35.0% | |
| TGTCAGATGAAGAAAGAGAA+AGG | + | chr1.1:19008555-19008574 | MS.gene026402:CDS | 35.0% | |
| TGTTAGTAAACCAGTATAGC+CGG | + | chr1.1:19007929-19007948 | MS.gene026402:intron | 35.0% | |
| TTACACAAGAGAACGGTTTA+GGG | + | chr1.1:19008900-19008919 | MS.gene026402:CDS | 35.0% | |
| TTCAAAGAACCTGCGTTAAT+TGG | + | chr1.1:19007562-19007581 | MS.gene026402:intron | 35.0% | |
| TTGAATATAACCACACGTGT+TGG | - | chr1.1:19006752-19006771 | None:intergenic | 35.0% | |
| TTTACACAAGAGAACGGTTT+AGG | + | chr1.1:19008899-19008918 | MS.gene026402:CDS | 35.0% | |
| ! | AAATTTGCTCCAAATCTGGT+AGG | - | chr1.1:19008767-19008786 | None:intergenic | 35.0% |
| ! | ACAAGACAGTAAGGATTAGT+TGG | - | chr1.1:19008608-19008627 | None:intergenic | 35.0% |
| ! | AGAATAATTTGTGGAACTGC+AGG | + | chr1.1:19008431-19008450 | MS.gene026402:intron | 35.0% |
| ! | CAGATTTGGAGCAAATTTGA+AGG | + | chr1.1:19008769-19008788 | MS.gene026402:CDS | 35.0% |
| ! | CTTCAAATTTGCTCCAAATC+TGG | - | chr1.1:19008771-19008790 | None:intergenic | 35.0% |
| ! | GCATTGACATTTCAGATTGA+AGG | + | chr1.1:19008233-19008252 | MS.gene026402:intron | 35.0% |
| ! | TCACGTTTTCAAATTATGGC+TGG | + | chr1.1:19008330-19008349 | MS.gene026402:intron | 35.0% |
| ! | TTTTCAATTGCAGAGGATTC+CGG | + | chr1.1:19006120-19006139 | MS.gene026402:intron | 35.0% |
| !! | AAATTGGTTTGGCCTAAGTA+TGG | - | chr1.1:19005872-19005891 | None:intergenic | 35.0% |
| !! | AAGCAAACTTGCTGTGATAT+AGG | + | chr1.1:19007687-19007706 | MS.gene026402:intron | 35.0% |
| !! | ATCCTTGGCTTAACTTTTTC+CGG | - | chr1.1:19008871-19008890 | None:intergenic | 35.0% |
| !! | CTTTTTGGGAGTGAACAATT+GGG | + | chr1.1:19005844-19005863 | MS.gene026402:intron | 35.0% |
| !! | GGAGGCTTTTGGAAAATTAA+AGG | - | chr1.1:19007505-19007524 | None:intergenic | 35.0% |
| !! | GTTTTGTTGAGATTCGATTG+TGG | + | chr1.1:19007798-19007817 | MS.gene026402:intron | 35.0% |
| !! | TAATTTTCTGAGGAAACACG+GGG | + | chr1.1:19006144-19006163 | MS.gene026402:CDS | 35.0% |
| !! | TTTTTGGGAGTGAACAATTG+GGG | + | chr1.1:19005845-19005864 | MS.gene026402:intron | 35.0% |
| !!! | AACCGTATTTGTTTTGTGGA+TGG | + | chr1.1:19006241-19006260 | MS.gene026402:CDS | 35.0% |
| AAACCATGTGCACCCAAATA+GGG | - | chr1.1:19005790-19005809 | None:intergenic | 40.0% | |
| AACAATTGGGGACCATACTT+AGG | + | chr1.1:19005857-19005876 | MS.gene026402:intron | 40.0% | |
| AACTTGCAACACTACATCTC+TGG | - | chr1.1:19008960-19008979 | None:intergenic | 40.0% | |
| AAGAGAAAGGGCAATGAATG+AGG | + | chr1.1:19008568-19008587 | MS.gene026402:CDS | 40.0% | |
| ACGTTCTCTTTCTCTCTCTT+TGG | + | chr1.1:19007396-19007415 | MS.gene026402:intron | 40.0% | |
| AGATGAATCCCAATTAACGC+AGG | - | chr1.1:19007574-19007593 | None:intergenic | 40.0% | |
| ATAACCACTCTCTCTTTGAG+TGG | + | chr1.1:19007272-19007291 | MS.gene026402:intron | 40.0% | |
| CAAATCTGGTAGGCAAATAC+TGG | - | chr1.1:19008757-19008776 | None:intergenic | 40.0% | |
| CAAGAAAGAAGGGAAAATCG+CGG | + | chr1.1:19008155-19008174 | MS.gene026402:CDS | 40.0% | |
| CAGTATTTGCCTACCAGATT+TGG | + | chr1.1:19008755-19008774 | MS.gene026402:intron | 40.0% | |
| CGAGCCTCCTATTTATATAG+GGG | + | chr1.1:19008635-19008654 | MS.gene026402:CDS | 40.0% | |
| CTCAAAGAGAGAGTGGTTAT+TGG | - | chr1.1:19007272-19007291 | None:intergenic | 40.0% | |
| GAAGACCTTTCAAATGACAG+AGG | - | chr1.1:19007427-19007446 | None:intergenic | 40.0% | |
| GCATCCCCTATATAAATAGG+AGG | - | chr1.1:19008642-19008661 | None:intergenic | 40.0% | |
| GCGAGCCTCCTATTTATATA+GGG | + | chr1.1:19008634-19008653 | MS.gene026402:CDS | 40.0% | |
| GGAAAAAGTTAAGCCAAGGA+TGG | + | chr1.1:19008870-19008889 | MS.gene026402:CDS | 40.0% | |
| GTGATGTTGAAGCTTAATGG+AGG | - | chr1.1:19007523-19007542 | None:intergenic | 40.0% | |
| GTGTAAATTCGTACCATCCT+TGG | - | chr1.1:19008886-19008905 | None:intergenic | 40.0% | |
| TAAACCATGTGCACCCAAAT+AGG | - | chr1.1:19005791-19005810 | None:intergenic | 40.0% | |
| TACACAAGAGAACGGTTTAG+GGG | + | chr1.1:19008901-19008920 | MS.gene026402:CDS | 40.0% | |
| TATGGATCAACTGATACCAG+CGG | + | chr1.1:19006531-19006550 | MS.gene026402:CDS | 40.0% | |
| TGCGAGCCTCCTATTTATAT+AGG | + | chr1.1:19008633-19008652 | MS.gene026402:CDS | 40.0% | |
| TGCGTTAATTGGGATTCATC+TGG | + | chr1.1:19007573-19007592 | MS.gene026402:intron | 40.0% | |
| TTTGAGAGAGAGTGATAGAG+AGG | + | chr1.1:19008008-19008027 | MS.gene026402:intron | 40.0% | |
| ! | AGTTGTTGGTTGTGGTTAGA+TGG | - | chr1.1:19007454-19007473 | None:intergenic | 40.0% |
| ! | CTCCTTTGATTTCCTGGATT+CGG | + | chr1.1:19006459-19006478 | MS.gene026402:CDS | 40.0% |
| ! | GCATTGGCATTTCAGATTGA+AGG | + | chr1.1:19006680-19006699 | MS.gene026402:intron | 40.0% |
| ! | GGATTCCGGATAATTTTCTG+AGG | + | chr1.1:19006134-19006153 | MS.gene026402:CDS | 40.0% |
| ! | GTTGTTGGTTGTGGTTAGAT+GGG | - | chr1.1:19007453-19007472 | None:intergenic | 40.0% |
| ! | TCACGTTTTCAAATTACGGC+TGG | + | chr1.1:19006777-19006796 | MS.gene026402:intron | 40.0% |
| ! | TGAAGCTTAATGGAGGCTTT+TGG | - | chr1.1:19007516-19007535 | None:intergenic | 40.0% |
| ! | TTGTCTGAAACCCCCTATTT+GGG | + | chr1.1:19005775-19005794 | MS.gene026402:intron | 40.0% |
| ! | TTGTTGGTTGTGGTTAGATG+GGG | - | chr1.1:19007452-19007471 | None:intergenic | 40.0% |
| ! | TTTGTCTGAAACCCCCTATT+TGG | + | chr1.1:19005774-19005793 | MS.gene026402:intron | 40.0% |
| !! | GCAAATTTGAAGGGTGTTTC+AGG | + | chr1.1:19008779-19008798 | MS.gene026402:CDS | 40.0% |
| !! | GCTTTTTGGGAGTGAACAAT+TGG | + | chr1.1:19005843-19005862 | MS.gene026402:intron | 40.0% |
| !! | TATCGACTCCTTTGATTTCC+TGG | + | chr1.1:19006453-19006472 | MS.gene026402:CDS | 40.0% |
| !!! | GTATTTGTTTTGTGGATGGC+TGG | + | chr1.1:19006245-19006264 | MS.gene026402:CDS | 40.0% |
| !!! | TGGCAACCGTATTTGTTTTG+TGG | + | chr1.1:19006237-19006256 | MS.gene026402:CDS | 40.0% |
| AACCAGTATAGCCGGTTATC+AGG | + | chr1.1:19007937-19007956 | MS.gene026402:intron | 45.0% | |
| AACCATGTGCACCCAAATAG+GGG | - | chr1.1:19005789-19005808 | None:intergenic | 45.0% | |
| AACCTGATAACCGGCTATAC+TGG | - | chr1.1:19007942-19007961 | None:intergenic | 45.0% | |
| AAGAGAACGGTTTAGGGGAA+GGG | + | chr1.1:19008906-19008925 | MS.gene026402:CDS | 45.0% | |
| AATGCACCAGTAGGGTTTGA+AGG | - | chr1.1:19006487-19006506 | None:intergenic | 45.0% | |
| ACAGGTAAGTTCCTAGAGCA+AGG | - | chr1.1:19005645-19005664 | None:intergenic | 45.0% | |
| ACATTACGGCCAAGGATTTC+TGG | - | chr1.1:19005702-19005721 | None:intergenic | 45.0% | |
| AGCCTCCACTGAAAATGATG+AGG | + | chr1.1:19006918-19006937 | MS.gene026402:CDS | 45.0% | |
| ATAAGAACAGCGCACAACAC+AGG | - | chr1.1:19005663-19005682 | None:intergenic | 45.0% | |
| ATTGATGTGTGTCAGACACC+GGG | - | chr1.1:19006710-19006729 | None:intergenic | 45.0% | |
| CAACGCTACTCAATTGGCAT+TGG | + | chr1.1:19006280-19006299 | MS.gene026402:CDS | 45.0% | |
| CAAGAAAGAAGCGGAAATCG+TGG | + | chr1.1:19006602-19006621 | MS.gene026402:CDS | 45.0% | |
| CAAGGATTCTGCTGGATGTA+TGG | + | chr1.1:19006513-19006532 | MS.gene026402:CDS | 45.0% | |
| CATAGAAAGGCTCTTCAGTC+TGG | - | chr1.1:19006399-19006418 | None:intergenic | 45.0% | |
| CATTGATGTGTGTCAGACAC+CGG | - | chr1.1:19006711-19006730 | None:intergenic | 45.0% | |
| CGCAGACTAACAAGACAGTA+AGG | - | chr1.1:19008617-19008636 | None:intergenic | 45.0% | |
| CTCCACTGAAAATGATGAGG+AGG | + | chr1.1:19006921-19006940 | MS.gene026402:CDS | 45.0% | |
| CTGGTATCAATGTCTCAGTG+CGG | + | chr1.1:19008349-19008368 | MS.gene026402:intron | 45.0% | |
| GACCTTTCAAATGACAGAGG+AGG | - | chr1.1:19007424-19007443 | None:intergenic | 45.0% | |
| TACTGGTGCATTGCAAAGCA+AGG | + | chr1.1:19006495-19006514 | MS.gene026402:CDS | 45.0% | |
| TGCCGAATCCAGGAAATCAA+AGG | - | chr1.1:19006464-19006483 | None:intergenic | 45.0% | |
| TGCTTTGCAATGCACCAGTA+GGG | - | chr1.1:19006495-19006514 | None:intergenic | 45.0% | |
| TTCTTATGCTCGTTGCCTTG+CGG | + | chr1.1:19005676-19005695 | MS.gene026402:CDS | 45.0% | |
| TTGCAAAGCAAGGATTCTGC+TGG | + | chr1.1:19006505-19006524 | MS.gene026402:CDS | 45.0% | |
| TTGCTTTGCAATGCACCAGT+AGG | - | chr1.1:19006496-19006515 | None:intergenic | 45.0% | |
| ! | CACCTCCTCTGTCATTTGAA+AGG | + | chr1.1:19007419-19007438 | MS.gene026402:intron | 45.0% |
| ! | CGTCTAGGATTGAAGAAGGT+TGG | + | chr1.1:19006217-19006236 | MS.gene026402:CDS | 45.0% |
| ! | CTCCTCATCATTTTCAGTGG+AGG | - | chr1.1:19006923-19006942 | None:intergenic | 45.0% |
| ! | TCACGTTTTCAAACTACGGC+TGG | + | chr1.1:19007140-19007159 | MS.gene026402:intron | 45.0% |
| ! | TGCCTCCTCATCATTTTCAG+TGG | - | chr1.1:19006926-19006945 | None:intergenic | 45.0% |
| ! | TTTCAGATTGAAGGCATGCC+CGG | + | chr1.1:19006689-19006708 | MS.gene026402:intron | 45.0% |
| ! | TTTTCCGGCCTTTGTCATCA+AGG | - | chr1.1:19008856-19008875 | None:intergenic | 45.0% |
| !! | TATTTAAACTTAAATTAATA+AGG | - | chr1.1:19005922-19005941 | None:intergenic | 5.0% |
| ACCATGTGCACCCAAATAGG+GGG | - | chr1.1:19005788-19005807 | None:intergenic | 50.0% | |
| AGAGAACGGTTTAGGGGAAG+GGG | + | chr1.1:19008907-19008926 | MS.gene026402:CDS | 50.0% | |
| AGTTCCTAGAGCAAGGCAGA+AGG | - | chr1.1:19005638-19005657 | None:intergenic | 50.0% | |
| ATTAGAGCAGTGCTAGCGTC+AGG | + | chr1.1:19007232-19007251 | MS.gene026402:intron | 50.0% | |
| ATTCCGCTTCAGACATCCGA+TGG | + | chr1.1:19008806-19008825 | MS.gene026402:CDS | 50.0% | |
| CAAGAGAACGGTTTAGGGGA+AGG | + | chr1.1:19008905-19008924 | MS.gene026402:CDS | 50.0% | |
| CAGACACGACACTGAGACAT+TGG | - | chr1.1:19007168-19007187 | None:intergenic | 50.0% | |
| CAGTTGCGACAGTCGAAAGT+TGG | - | chr1.1:19006171-19006190 | None:intergenic | 50.0% | |
| CATCCGATGGTGAGAAACAG+TGG | + | chr1.1:19008819-19008838 | MS.gene026402:CDS | 50.0% | |
| CTTCAATCCTAGACGCCAGA+CGG | - | chr1.1:19006212-19006231 | None:intergenic | 50.0% | |
| GCAACTGTCACTATTCCTGG+CGG | + | chr1.1:19006184-19006203 | MS.gene026402:CDS | 50.0% | |
| GGCCGGAAAAAGTTAAGCCA+AGG | + | chr1.1:19008866-19008885 | MS.gene026402:CDS | 50.0% | |
| GTCGCAACTGTCACTATTCC+TGG | + | chr1.1:19006181-19006200 | MS.gene026402:CDS | 50.0% | |
| TAACGCAGTGCTGCAAGTGA+GGG | - | chr1.1:19009010-19009029 | None:intergenic | 50.0% | |
| TCACCATCGGATGTCTGAAG+CGG | - | chr1.1:19008812-19008831 | None:intergenic | 50.0% | |
| TCTTGCAGACGCACGTTCAT+AGG | - | chr1.1:19008522-19008541 | None:intergenic | 50.0% | |
| TGGTCCACTCAAAGAGAGAG+TGG | - | chr1.1:19007279-19007298 | None:intergenic | 50.0% | |
| TGTGCACAACATTACGGCCA+AGG | - | chr1.1:19005710-19005729 | None:intergenic | 50.0% | |
| ! | ACGCCACTGTTTCTCACCAT+CGG | - | chr1.1:19008825-19008844 | None:intergenic | 50.0% |
| ! | CTGGCGTCTAGGATTGAAGA+AGG | + | chr1.1:19006213-19006232 | MS.gene026402:CDS | 50.0% |
| ! | GTTCGCTGCCTTGATGACAA+AGG | + | chr1.1:19008845-19008864 | MS.gene026402:CDS | 50.0% |
| ! | TGTTGGCTATGATTCTCCGC+TGG | - | chr1.1:19006550-19006569 | None:intergenic | 50.0% |
| !! | TGTTGGTGTCGCATCTGAGT+TGG | - | chr1.1:19007098-19007117 | None:intergenic | 50.0% |
| ACCCCCTATTTGGGTGCACA+TGG | + | chr1.1:19005784-19005803 | MS.gene026402:intron | 55.0% | |
| AGACGCGACACTAACACGTG+TGG | + | chr1.1:19008292-19008311 | MS.gene026402:intron | 55.0% | |
| AGATGCGACACCAACACGTG+TGG | + | chr1.1:19007102-19007121 | MS.gene026402:intron | 55.0% | |
| CAGACACGACACTGAGACGT+TGG | - | chr1.1:19006805-19006824 | None:intergenic | 55.0% | |
| CTAACGCAGTGCTGCAAGTG+AGG | - | chr1.1:19009011-19009030 | None:intergenic | 55.0% | |
| GGATCCTTCTGCCTTGCTCT+AGG | + | chr1.1:19005631-19005650 | MS.gene026402:CDS | 55.0% | |
| TCGGCACCTTCAAACCCTAC+TGG | + | chr1.1:19006478-19006497 | MS.gene026402:CDS | 55.0% | |
| TGTCAGTGTCGCGTCTGAGT+TGG | - | chr1.1:19006735-19006754 | None:intergenic | 55.0% | |
| TTGTGGAACTGCAGGTGCAC+AGG | + | chr1.1:19006894-19006913 | MS.gene026402:intron | 55.0% | |
| ! | GCTGCCTTGATGACAAAGGC+CGG | + | chr1.1:19008849-19008868 | MS.gene026402:CDS | 55.0% |
| !! | GGTTTGAAGGTGCCGAATCC+AGG | - | chr1.1:19006474-19006493 | None:intergenic | 55.0% |
| AGACGCGACACTGACACGTG+TGG | + | chr1.1:19006739-19006758 | MS.gene026402:intron | 60.0% | |
| GCCTTGCGGCCAGAAATCCT+TGG | + | chr1.1:19005690-19005709 | MS.gene026402:CDS | 60.0% | |
| !! | GCCAAGGATTTCTGGCCGCA+AGG | - | chr1.1:19005694-19005713 | None:intergenic | 60.0% |
| CTATTCCTGGCGGCACCGTC+TGG | + | chr1.1:19006194-19006213 | MS.gene026402:CDS | 65.0% | |
| GGCGGCACCGTCTGGCGTCT+AGG | + | chr1.1:19006202-19006221 | MS.gene026402:CDS | 75.0% | |
| !! | AGACGCCAGACGGTGCCGCC+AGG | - | chr1.1:19006202-19006221 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 19005625 | 19009030 | 19005625 | ID=MS.gene026402 |
| chr1.1 | mRNA | 19005625 | 19009030 | 19005625 | ID=MS.gene026402.t1;Parent=MS.gene026402 |
| chr1.1 | exon | 19005625 | 19005714 | 19005625 | ID=MS.gene026402.t1.exon1;Parent=MS.gene026402.t1 |
| chr1.1 | CDS | 19005625 | 19005714 | 19005625 | ID=cds.MS.gene026402.t1;Parent=MS.gene026402.t1 |
| chr1.1 | exon | 19006133 | 19006637 | 19006133 | ID=MS.gene026402.t1.exon2;Parent=MS.gene026402.t1 |
| chr1.1 | CDS | 19006133 | 19006637 | 19006133 | ID=cds.MS.gene026402.t1;Parent=MS.gene026402.t1 |
| chr1.1 | exon | 19006908 | 19007000 | 19006908 | ID=MS.gene026402.t1.exon3;Parent=MS.gene026402.t1 |
| chr1.1 | CDS | 19006908 | 19007000 | 19006908 | ID=cds.MS.gene026402.t1;Parent=MS.gene026402.t1 |
| chr1.1 | exon | 19008089 | 19008190 | 19008089 | ID=MS.gene026402.t1.exon4;Parent=MS.gene026402.t1 |
| chr1.1 | CDS | 19008089 | 19008190 | 19008089 | ID=cds.MS.gene026402.t1;Parent=MS.gene026402.t1 |
| chr1.1 | exon | 19008453 | 19008667 | 19008453 | ID=MS.gene026402.t1.exon5;Parent=MS.gene026402.t1 |
| chr1.1 | CDS | 19008453 | 19008667 | 19008453 | ID=cds.MS.gene026402.t1;Parent=MS.gene026402.t1 |
| chr1.1 | exon | 19008758 | 19009030 | 19008758 | ID=MS.gene026402.t1.exon6;Parent=MS.gene026402.t1 |
| chr1.1 | CDS | 19008758 | 19009030 | 19008758 | ID=cds.MS.gene026402.t1;Parent=MS.gene026402.t1 |
| Gene Sequence |
| Protein sequence |
