Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02682.t1 | XP_003603254.2 | 97.4 | 831 | 22 | 0 | 1 | 831 | 79 | 909 | 0.00E+00 | 1562.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02682.t1 | Q3S4A7 | 58.1 | 856 | 297 | 12 | 1 | 839 | 80 | 890 | 8.6e-255 | 881.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02682.t1 | G7J964 | 97.4 | 831 | 22 | 0 | 1 | 831 | 79 | 909 | 0.0e+00 | 1562.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene02682.t1 | TR | Others |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02682.t1 | MTR_3g105590 | 97.353 | 831 | 22 | 0 | 1 | 831 | 79 | 909 | 0.0 | 1678 |
| MS.gene02682.t1 | MTR_1g013360 | 68.943 | 908 | 204 | 16 | 1 | 839 | 82 | 980 | 0.0 | 1182 |
| MS.gene02682.t1 | MTR_1g014670 | 77.374 | 358 | 71 | 2 | 1 | 357 | 41 | 389 | 0.0 | 561 |
| MS.gene02682.t1 | MTR_3g085130 | 28.625 | 538 | 340 | 12 | 295 | 797 | 450 | 978 | 9.82e-43 | 169 |
| MS.gene02682.t1 | MTR_8g080770 | 36.232 | 276 | 165 | 4 | 295 | 568 | 286 | 552 | 3.33e-39 | 157 |
| MS.gene02682.t1 | MTR_8g080770 | 36.232 | 276 | 165 | 4 | 295 | 568 | 395 | 661 | 6.10e-39 | 156 |
| MS.gene02682.t1 | MTR_3g085130 | 35.395 | 291 | 177 | 5 | 295 | 582 | 240 | 522 | 3.73e-38 | 153 |
| MS.gene02682.t1 | MTR_8g106150 | 34.564 | 298 | 174 | 5 | 295 | 574 | 143 | 437 | 8.23e-36 | 145 |
| MS.gene02682.t1 | MTR_8g106150 | 34.564 | 298 | 174 | 5 | 295 | 574 | 386 | 680 | 1.21e-35 | 146 |
| MS.gene02682.t1 | MTR_5g097410 | 34.043 | 282 | 169 | 7 | 295 | 568 | 620 | 892 | 2.63e-35 | 145 |
| MS.gene02682.t1 | MTR_4g031150 | 31.778 | 343 | 179 | 11 | 253 | 587 | 349 | 644 | 2.97e-34 | 141 |
| MS.gene02682.t1 | MTR_7g109150 | 34.247 | 292 | 145 | 8 | 297 | 585 | 349 | 596 | 9.18e-33 | 135 |
| MS.gene02682.t1 | MTR_8g075340 | 31.250 | 272 | 166 | 5 | 295 | 564 | 474 | 726 | 3.60e-27 | 119 |
| MS.gene02682.t1 | MTR_5g022470 | 32.014 | 278 | 168 | 5 | 295 | 570 | 512 | 770 | 1.08e-25 | 114 |
| MS.gene02682.t1 | MTR_5g022470 | 32.014 | 278 | 168 | 5 | 295 | 570 | 512 | 770 | 1.18e-25 | 114 |
| MS.gene02682.t1 | MTR_1g090850 | 28.571 | 315 | 184 | 11 | 266 | 568 | 363 | 648 | 5.34e-19 | 93.2 |
| MS.gene02682.t1 | MTR_1g087140 | 28.060 | 335 | 188 | 14 | 257 | 568 | 362 | 666 | 8.90e-18 | 89.4 |
| MS.gene02682.t1 | MTR_1g079790 | 26.531 | 196 | 128 | 5 | 253 | 437 | 327 | 517 | 6.62e-12 | 69.7 |
| MS.gene02682.t1 | MTR_1g079790 | 26.531 | 196 | 128 | 5 | 253 | 437 | 327 | 517 | 1.17e-11 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02682.t1 | AT5G10720 | 57.932 | 851 | 290 | 12 | 1 | 831 | 80 | 882 | 0.0 | 947 |
| MS.gene02682.t1 | AT1G27320 | 37.545 | 277 | 158 | 5 | 295 | 568 | 453 | 717 | 2.44e-40 | 161 |
| MS.gene02682.t1 | AT2G01830 | 35.192 | 287 | 166 | 6 | 295 | 568 | 475 | 754 | 1.16e-36 | 149 |
| MS.gene02682.t1 | AT2G01830 | 35.192 | 287 | 166 | 6 | 295 | 568 | 452 | 731 | 1.21e-36 | 149 |
| MS.gene02682.t1 | AT2G01830 | 35.192 | 287 | 166 | 6 | 295 | 568 | 452 | 731 | 1.21e-36 | 149 |
| MS.gene02682.t1 | AT2G01830 | 35.192 | 287 | 166 | 6 | 295 | 568 | 452 | 731 | 1.21e-36 | 149 |
| MS.gene02682.t1 | AT2G01830 | 35.192 | 287 | 166 | 6 | 295 | 568 | 452 | 731 | 1.21e-36 | 149 |
| MS.gene02682.t1 | AT2G01830 | 35.192 | 287 | 166 | 6 | 295 | 568 | 464 | 743 | 1.49e-36 | 149 |
| MS.gene02682.t1 | AT5G35750 | 36.879 | 282 | 160 | 8 | 295 | 568 | 590 | 861 | 1.29e-35 | 146 |
| MS.gene02682.t1 | AT2G40940 | 32.110 | 327 | 173 | 9 | 252 | 570 | 298 | 583 | 8.18e-30 | 126 |
| MS.gene02682.t1 | AT2G17820 | 31.655 | 278 | 169 | 4 | 295 | 570 | 501 | 759 | 1.24e-27 | 121 |
| MS.gene02682.t1 | AT1G66340 | 27.628 | 333 | 186 | 7 | 253 | 577 | 299 | 584 | 1.79e-27 | 119 |
| MS.gene02682.t1 | AT2G47430 | 29.022 | 317 | 197 | 10 | 263 | 568 | 366 | 665 | 7.06e-23 | 105 |
| MS.gene02682.t1 | AT5G10680 | 38.889 | 90 | 50 | 2 | 1 | 90 | 77 | 161 | 1.03e-11 | 66.2 |
| MS.gene02682.t1 | AT5G10680 | 38.889 | 90 | 50 | 2 | 1 | 90 | 77 | 161 | 1.03e-11 | 66.2 |
Find 158 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAAATGCTCCTGTTGTTAT+TGG | 0.154518 | 3.3:-86994522 | MS.gene02682:CDS |
| ATATAGAAACCGGTCGTTTA+TGG | 0.218811 | 3.3:+86994829 | None:intergenic |
| CAATTCCAACCTCCCAATTT+AGG | 0.220850 | 3.3:-86991821 | MS.gene02682:CDS |
| CAATACATAGTTTATTTAAA+AGG | 0.226595 | 3.3:-86992272 | MS.gene02682:CDS |
| TAAACGACCGGTTTCTATAT+TGG | 0.230609 | 3.3:-86994826 | MS.gene02682:CDS |
| GCTAAGGAAGTTGGAGATAT+TGG | 0.232044 | 3.3:-86994886 | MS.gene02682:CDS |
| TGGATGATATTTATGATATA+TGG | 0.239075 | 3.3:-86994806 | MS.gene02682:CDS |
| AGAGACTAGATGGCCTAAAT+TGG | 0.246731 | 3.3:+86991808 | None:intergenic |
| GCTTGAAGACCATCCATAAT+TGG | 0.260574 | 3.3:+86991139 | None:intergenic |
| GAGATAAGATCTCCACTTTC+TGG | 0.266189 | 3.3:-86993731 | MS.gene02682:CDS |
| CAATAACAACAGGAGCATTT+TGG | 0.278884 | 3.3:+86994523 | None:intergenic |
| CATCCTGTCTTTGTTTGTTT+AGG | 0.281414 | 3.3:+86994913 | None:intergenic |
| GCCTTCATTTGTAAATTTGA+TGG | 0.281976 | 3.3:+86992726 | None:intergenic |
| AAACTTCCCTCTTAAAATCT+TGG | 0.284644 | 3.3:+86994293 | None:intergenic |
| AACATAGATGTTGTCAATAA+TGG | 0.290513 | 3.3:-86991389 | MS.gene02682:CDS |
| TACCTCTCTAGGTCGAAATT+TGG | 0.290931 | 3.3:+86993195 | None:intergenic |
| TTTAGGCTTTGATATGGATT+TGG | 0.311499 | 3.3:+86991481 | None:intergenic |
| GGATGTGTGCATGCCAATTA+TGG | 0.314902 | 3.3:-86991152 | MS.gene02682:CDS |
| GGGTAGACTTTGCTCGATTC+CGG | 0.321938 | 3.3:+86991060 | None:intergenic |
| CATGTTGTCATCTGGAGATT+TGG | 0.337835 | 3.3:-86993639 | MS.gene02682:CDS |
| ATCTGCTACATGTCCTTCTA+TGG | 0.343030 | 3.3:+86993123 | None:intergenic |
| GATCTTTCCAAGGTTGAATC+AGG | 0.345581 | 3.3:-86993590 | MS.gene02682:intron |
| AAGAATCTGCAATACCATTC+TGG | 0.355194 | 3.3:+86991567 | None:intergenic |
| TTGGCTCTTGCACAACATAA+AGG | 0.355853 | 3.3:+86992689 | None:intergenic |
| AGTTGATGATTCAAATTCAT+TGG | 0.362860 | 3.3:-86991666 | MS.gene02682:CDS |
| GTGAGTTCTGTTTGCTCCGC+TGG | 0.364472 | 3.3:+86991784 | None:intergenic |
| CAGATGATATCAAGTTGCTT+GGG | 0.368202 | 3.3:-86990094 | MS.gene02682:CDS |
| ATGGGAATTCGCTTTGTAGA+TGG | 0.376345 | 3.3:+86991013 | None:intergenic |
| TTTCACTACATTCACAGAAA+TGG | 0.384669 | 3.3:+86992618 | None:intergenic |
| GTAGATCACGCTCGAAAGTA+TGG | 0.384965 | 3.3:-86992234 | MS.gene02682:CDS |
| CTTTCGAGGAAACAGGCAAT+TGG | 0.386287 | 3.3:-86991099 | MS.gene02682:CDS |
| CATTCGTAATTGCAGGTCAT+TGG | 0.389666 | 3.3:-86992961 | MS.gene02682:intron |
| CAGAAAATATTAACCATAGA+AGG | 0.390045 | 3.3:-86993136 | MS.gene02682:CDS |
| AATAAAACCATTCACATAAC+AGG | 0.395118 | 3.3:-86993899 | MS.gene02682:intron |
| TGCAGATTCTTCTCAGCATA+TGG | 0.396404 | 3.3:-86991555 | MS.gene02682:CDS |
| TTCAAGCAACAAAACTAATT+CGG | 0.398524 | 3.3:-86991123 | MS.gene02682:CDS |
| AAATGTGTCATCACCTCTAT+AGG | 0.404208 | 3.3:+86993094 | None:intergenic |
| CTAAATTGGGAGGTTGGAAT+TGG | 0.404734 | 3.3:+86991822 | None:intergenic |
| CAATCAACCTGTTATGTGAA+TGG | 0.404844 | 3.3:+86993892 | None:intergenic |
| TGTTGTACAAATTACTAATC+AGG | 0.405019 | 3.3:+86990038 | None:intergenic |
| ATTCGGTCTTTCGAGGAAAC+AGG | 0.407480 | 3.3:-86991106 | MS.gene02682:CDS |
| TCCTGTTGTTATTGGCCATC+AGG | 0.408491 | 3.3:-86994514 | MS.gene02682:CDS |
| GCCATCAAATTTACAAATGA+AGG | 0.414139 | 3.3:-86992727 | MS.gene02682:CDS |
| TTTACAAATGAAGGCAAAGT+AGG | 0.421277 | 3.3:-86992718 | MS.gene02682:CDS |
| GTGTCTAGCAAAGAACAAAA+TGG | 0.421334 | 3.3:-86991974 | MS.gene02682:CDS |
| TTCTGCATAGGTTGAGTTGA+TGG | 0.425115 | 3.3:-86992011 | MS.gene02682:intron |
| TTGGATGTCATGTTGTCATC+TGG | 0.426050 | 3.3:-86993647 | MS.gene02682:CDS |
| AGCAAGGCAGGTGAAACAAT+TGG | 0.429476 | 3.3:-86994178 | MS.gene02682:CDS |
| ATCGAGCATTCACTCTTAAC+CGG | 0.430609 | 3.3:+86992559 | None:intergenic |
| CAAGCGATCGAGACCTTGTA+TGG | 0.430770 | 3.3:+86991929 | None:intergenic |
| TCACCTGCCTTGCTGAAGAC+AGG | 0.433507 | 3.3:+86994187 | None:intergenic |
| GCTCGAAAGTATGGTGGGAC+AGG | 0.435553 | 3.3:-86992225 | MS.gene02682:CDS |
| TCAGATGATATCAAGTTGCT+TGG | 0.437873 | 3.3:-86990095 | MS.gene02682:CDS |
| AGCGTACAAAAGATTAGTTC+AGG | 0.440570 | 3.3:-86992649 | MS.gene02682:CDS |
| AAGTATGGTGGGACAGGGCT+AGG | 0.445638 | 3.3:-86992219 | MS.gene02682:CDS |
| GGATGTTGAGCTAAGGAAGT+TGG | 0.448739 | 3.3:-86994895 | MS.gene02682:CDS |
| ACTTTCTGGTGTTGTTAGCA+TGG | 0.454583 | 3.3:-86993717 | MS.gene02682:CDS |
| ATTCACTGGATCTGGTGTTA+AGG | 0.458619 | 3.3:-86994320 | MS.gene02682:CDS |
| CTCCGCTGGAAGAGACTAGA+TGG | 0.459344 | 3.3:+86991798 | None:intergenic |
| TCCAATGACAACATATCAAA+AGG | 0.462175 | 3.3:-86991698 | MS.gene02682:CDS |
| ATATCATCCAATATAGAAAC+CGG | 0.463376 | 3.3:+86994819 | None:intergenic |
| ATTACCTCCTCATGTAAACT+TGG | 0.464486 | 3.3:+86994453 | None:intergenic |
| TCCTGATGGCCAATAACAAC+AGG | 0.466242 | 3.3:+86994513 | None:intergenic |
| GGTTGTGATGTATATGATAC+AGG | 0.469429 | 3.3:-86992484 | MS.gene02682:CDS |
| AAAACTAATTCGGTCTTTCG+AGG | 0.469760 | 3.3:-86991113 | MS.gene02682:CDS |
| ACTAGCAATATGCAAACAAC+TGG | 0.471382 | 3.3:-86992196 | MS.gene02682:intron |
| TTTCGAGGAAACAGGCAATT+GGG | 0.473287 | 3.3:-86991098 | MS.gene02682:CDS |
| AGCCTACCTTATGAAACATT+GGG | 0.475348 | 3.3:-86994985 | None:intergenic |
| ATTTGAGAGAGTTCTTCAAC+AGG | 0.477140 | 3.3:+86994582 | None:intergenic |
| TTACTTTCACAGTTATTCAC+AGG | 0.477586 | 3.3:-86990069 | MS.gene02682:CDS |
| GATGCACTTGGAAAAGTTGT+TGG | 0.486450 | 3.3:-86994682 | MS.gene02682:CDS |
| GAGACTAGATGGCCTAAATT+GGG | 0.487886 | 3.3:+86991809 | None:intergenic |
| TCTTGTTATCTTCAACAAGA+AGG | 0.489724 | 3.3:+86991456 | None:intergenic |
| ACCTCAACTCTTTGTCCTGA+TGG | 0.491700 | 3.3:+86994499 | None:intergenic |
| GAACCTGTCTTCAGCAAGGC+AGG | 0.495617 | 3.3:-86994190 | MS.gene02682:CDS |
| ATGACCCAACTGTTTCATCA+TGG | 0.497053 | 3.3:+86991412 | None:intergenic |
| CACATTCATACTTCCATACA+AGG | 0.497367 | 3.3:-86991942 | MS.gene02682:CDS |
| TAGCCTACCTTATGAAACAT+TGG | 0.501009 | 3.3:-86994986 | None:intergenic |
| TTTCCAACCTGATTCAACCT+TGG | 0.502835 | 3.3:+86993583 | None:intergenic |
| GGGAATGGATGTAACAGATC+AGG | 0.507588 | 3.3:-86994143 | MS.gene02682:intron |
| ATAATATTCATAATCTCGAT+TGG | 0.508357 | 3.3:+86991039 | None:intergenic |
| CAAGGAGCAAAGACAGCTGT+TGG | 0.510482 | 3.3:-86993666 | MS.gene02682:CDS |
| TGGAATCAATTACATGGGAA+TGG | 0.513449 | 3.3:-86994158 | MS.gene02682:CDS |
| GTCGAAATATTCACTGGATC+TGG | 0.516463 | 3.3:-86994328 | MS.gene02682:CDS |
| AGTATGATACTGTTGTGTAC+TGG | 0.516963 | 3.3:-86994716 | MS.gene02682:CDS |
| GATGGCCTAAATTGGGAGGT+TGG | 0.523038 | 3.3:+86991816 | None:intergenic |
| AACAATTGGAATCAATTACA+TGG | 0.523571 | 3.3:-86994164 | MS.gene02682:CDS |
| AGCAGATGATGTACCTATAG+AGG | 0.523933 | 3.3:-86993107 | MS.gene02682:intron |
| CAACCTAAACAAACAAAGAC+AGG | 0.527200 | 3.3:-86994916 | MS.gene02682:CDS |
| ATTGGAAGAACATAGATTTG+AGG | 0.528522 | 3.3:-86994868 | MS.gene02682:CDS |
| CTGTGTAGGAGTTATGAAGT+TGG | 0.528994 | 3.3:-86993224 | MS.gene02682:intron |
| ATGCTAACAACACCAGAAAG+TGG | 0.529641 | 3.3:+86993719 | None:intergenic |
| TCTGCATAGGTTGAGTTGAT+GGG | 0.531045 | 3.3:-86992010 | MS.gene02682:intron |
| CTTTCCAAGTTTACATGAGG+AGG | 0.532167 | 3.3:-86994457 | MS.gene02682:intron |
| ACTGATGTCGAAATATTCAC+TGG | 0.534032 | 3.3:-86994334 | MS.gene02682:CDS |
| ACATGCTTTACTACCTCTCT+AGG | 0.534889 | 3.3:+86993184 | None:intergenic |
| GATGTATATGATACAGGCAT+TGG | 0.535140 | 3.3:-86992478 | MS.gene02682:CDS |
| CTCAGATGAATTCTCAGACA+TGG | 0.538037 | 3.3:-86991891 | MS.gene02682:CDS |
| CTAGTGCTTACCGCAACAAT+GGG | 0.538212 | 3.3:+86990995 | None:intergenic |
| TAATATTCATAATCTCGATT+GGG | 0.540994 | 3.3:+86991040 | None:intergenic |
| AGATGATATCAAGTTGCTTG+GGG | 0.541317 | 3.3:-86990093 | MS.gene02682:CDS |
| ACAATCCATGATGAAACAGT+TGG | 0.545179 | 3.3:-86991417 | MS.gene02682:CDS |
| TCTAGTGCTTACCGCAACAA+TGG | 0.547183 | 3.3:+86990994 | None:intergenic |
| TAATGATGAGTGTAGATCTC+CGG | 0.548746 | 3.3:-86992578 | MS.gene02682:CDS |
| GAAACATTGGGAGTATAAGC+AGG | 0.551772 | 3.3:-86994973 | MS.gene02682:CDS |
| TGGAGCAGAGGCGGTGCGTG+CGG | 0.557895 | 3.3:-86991369 | MS.gene02682:CDS |
| TTACAAATGAAGGCAAAGTA+GGG | 0.560913 | 3.3:-86992717 | MS.gene02682:CDS |
| TATGTTGTCATTGGAAGTAG+AGG | 0.564452 | 3.3:+86991706 | None:intergenic |
| TGACATACTTGATCTTTCCA+AGG | 0.565536 | 3.3:-86993600 | MS.gene02682:CDS |
| TACATATGACCTGGTTCTGA+TGG | 0.568683 | 3.3:-86991336 | MS.gene02682:intron |
| GCACTTGGAAAAGTTGTTGG+AGG | 0.568733 | 3.3:-86994679 | MS.gene02682:CDS |
| GAAACAGCGAGCGATGCACT+TGG | 0.570341 | 3.3:-86994694 | MS.gene02682:CDS |
| CAATCCATGATGAAACAGTT+GGG | 0.571813 | 3.3:-86991416 | MS.gene02682:CDS |
| AGATAACAAGATTAACATCA+TGG | 0.572107 | 3.3:-86991444 | MS.gene02682:CDS |
| CATTATATAGATGATGTTTG+TGG | 0.574874 | 3.3:+86991603 | None:intergenic |
| TTCCACCACAAAACTTGACA+AGG | 0.576173 | 3.3:-86993684 | MS.gene02682:CDS |
| TATGAGAGCAAAGAAAGTGC+TGG | 0.576593 | 3.3:-86993768 | MS.gene02682:CDS |
| GGAGTATAAGCAGGCGAGCG+TGG | 0.578452 | 3.3:-86994964 | MS.gene02682:CDS |
| ATGATGCTGCGGCTGTCTGA+AGG | 0.579152 | 3.3:+86993161 | None:intergenic |
| CCTCATGTAAACTTGGAAAG+TGG | 0.579172 | 3.3:+86994460 | None:intergenic |
| AGATTTGAGGACGAAAGATA+CGG | 0.579302 | 3.3:-86994855 | MS.gene02682:CDS |
| ATCTATATAATGCTCATGCA+TGG | 0.579361 | 3.3:-86991592 | MS.gene02682:CDS |
| TCTGATGATACAACAACAGA+AGG | 0.580893 | 3.3:-86991851 | MS.gene02682:CDS |
| CCACTTTCCAAGTTTACATG+AGG | 0.590769 | 3.3:-86994460 | MS.gene02682:CDS |
| AAAGACAGGATGTTGAGCTA+AGG | 0.596277 | 3.3:-86994902 | MS.gene02682:CDS |
| CTCGAAAGTATGGTGGGACA+GGG | 0.596487 | 3.3:-86992224 | MS.gene02682:CDS |
| TACCAAATTTCGACCTAGAG+AGG | 0.598602 | 3.3:-86993197 | MS.gene02682:CDS |
| GCTCATGCATGGTTCCAGAA+TGG | 0.599781 | 3.3:-86991581 | MS.gene02682:CDS |
| AAGAGTGAATGCTCGATGAA+CGG | 0.601254 | 3.3:-86992553 | MS.gene02682:CDS |
| GGCCATCTAGTCTCTTCCAG+CGG | 0.607869 | 3.3:-86991800 | MS.gene02682:CDS |
| GATACAGGCATTGGAATACC+AGG | 0.612622 | 3.3:-86992469 | MS.gene02682:intron |
| AAAGCGAATTCCCATTGTTG+CGG | 0.612866 | 3.3:-86991005 | MS.gene02682:intron |
| AATGCAACAACAGTGTGGAT+AGG | 0.617754 | 3.3:-86992505 | MS.gene02682:CDS |
| ACAATTGGAATCAATTACAT+GGG | 0.619533 | 3.3:-86994163 | MS.gene02682:CDS |
| ATCACGCTCGAAAGTATGGT+GGG | 0.619892 | 3.3:-86992230 | MS.gene02682:CDS |
| TACTTTCACAGTTATTCACA+GGG | 0.620593 | 3.3:-86990068 | MS.gene02682:CDS |
| CATAAATTACCATCAGAACC+AGG | 0.627013 | 3.3:+86991327 | None:intergenic |
| TGTAGAACCTGTCTTCAGCA+AGG | 0.629088 | 3.3:-86994194 | MS.gene02682:CDS |
| GTGTGCATGCCAATTATGGA+TGG | 0.635228 | 3.3:-86991148 | MS.gene02682:CDS |
| AAATTCTCACAAATTTAACC+AGG | 0.643959 | 3.3:-86992918 | MS.gene02682:intron |
| GCATAGGTTGAGTTGATGGG+AGG | 0.644228 | 3.3:-86992007 | MS.gene02682:intron |
| TCAGCGCTGTACATATGACC+TGG | 0.644473 | 3.3:-86991345 | MS.gene02682:CDS |
| ATACGGAGGCCATAAACGAC+CGG | 0.646119 | 3.3:-86994838 | MS.gene02682:CDS |
| AGATTCTTCTCAGCATATGG+TGG | 0.646433 | 3.3:-86991552 | MS.gene02682:CDS |
| GATTGCTGTTCAGAAAGCAA+AGG | 0.648370 | 3.3:-86993933 | MS.gene02682:CDS |
| TGTCAATAATGGAGCAGAGG+CGG | 0.649552 | 3.3:-86991378 | MS.gene02682:CDS |
| GAAAATCCACAAAATTTGTG+CGG | 0.650564 | 3.3:+86991749 | None:intergenic |
| ATGTTGTCATTGGAAGTAGA+GGG | 0.650718 | 3.3:+86991707 | None:intergenic |
| GATCACGCTCGAAAGTATGG+TGG | 0.655464 | 3.3:-86992231 | MS.gene02682:CDS |
| GCCATCAGGACAAAGAGTTG+AGG | 0.656169 | 3.3:-86994500 | MS.gene02682:CDS |
| GATGATATCAAGTTGCTTGG+GGG | 0.658880 | 3.3:-86990092 | MS.gene02682:CDS |
| TGTTGTCAATAATGGAGCAG+AGG | 0.659976 | 3.3:-86991381 | MS.gene02682:CDS |
| ACTAGATGGCCTAAATTGGG+AGG | 0.678417 | 3.3:+86991812 | None:intergenic |
| ACTCAAATGCAACAACAGTG+TGG | 0.687455 | 3.3:-86992510 | MS.gene02682:CDS |
| CTCGATGAACGGAGACACAG+AGG | 0.693267 | 3.3:-86992542 | MS.gene02682:CDS |
| GTATGGAAGTATGAATGTGA+AGG | 0.713387 | 3.3:+86991946 | None:intergenic |
| TTTGAGGACGAAAGATACGG+AGG | 0.715280 | 3.3:-86994852 | MS.gene02682:CDS |
| ACTTTCACAGTTATTCACAG+GGG | 0.742375 | 3.3:-86990067 | MS.gene02682:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTATTTAAACTTATCTAT+TGG | - | chr3.3:86991508-86991527 | MS.gene02682:CDS | 10.0% |
| !!! | CTTCTTATTTTTTAAATTTT+TGG | - | chr3.3:86990994-86991013 | MS.gene02682:intron | 10.0% |
| !!! | TTCTATTATATTTTGTTATA+GGG | - | chr3.3:86991644-86991663 | MS.gene02682:CDS | 10.0% |
| !!! | TTTCTATTATATTTTGTTAT+AGG | - | chr3.3:86991643-86991662 | MS.gene02682:CDS | 10.0% |
| !!! | TTTTCTAATTAATATGTTAA+TGG | + | chr3.3:86994068-86994087 | None:intergenic | 10.0% |
| !! | CAATACATAGTTTATTTAAA+AGG | - | chr3.3:86992755-86992774 | MS.gene02682:intron | 15.0% |
| !! | TTAAATAATTCAATCTAAAC+AGG | + | chr3.3:86991498-86991517 | None:intergenic | 15.0% |
| !!! | AAAACTAATTAATTTGATAG+AGG | + | chr3.3:86991192-86991211 | None:intergenic | 15.0% |
| !! | ATAATATTCATAATCTCGAT+TGG | + | chr3.3:86993991-86994010 | None:intergenic | 20.0% |
| !! | CTTGAATCAATACAATTATT+AGG | - | chr3.3:86994892-86994911 | MS.gene02682:CDS | 20.0% |
| !! | TAATATTCATAATCTCGATT+GGG | + | chr3.3:86993990-86994009 | None:intergenic | 20.0% |
| !! | TGGATGATATTTATGATATA+TGG | - | chr3.3:86990221-86990240 | MS.gene02682:intron | 20.0% |
| !!! | TTTTGGTAAAGTAAATTCTT+GGG | - | chr3.3:86994760-86994779 | MS.gene02682:CDS | 20.0% |
| !!! | TTTTTGGTAAAGTAAATTCT+TGG | - | chr3.3:86994759-86994778 | MS.gene02682:CDS | 20.0% |
| ! | AAACAGAAGAATAGAGATTA+AGG | + | chr3.3:86992631-86992650 | None:intergenic | 25.0% |
| ! | AAATGTGTAGAGATATAATG+AGG | - | chr3.3:86994714-86994733 | MS.gene02682:CDS | 25.0% |
| ! | AAATTCTCACAAATTTAACC+AGG | - | chr3.3:86992109-86992128 | MS.gene02682:intron | 25.0% |
| ! | AACAATTGGAATCAATTACA+TGG | - | chr3.3:86990863-86990882 | MS.gene02682:intron | 25.0% |
| ! | AACATAGATGTTGTCAATAA+TGG | - | chr3.3:86993638-86993657 | MS.gene02682:CDS | 25.0% |
| ! | AATAAAACCATTCACATAAC+AGG | - | chr3.3:86991128-86991147 | MS.gene02682:CDS | 25.0% |
| ! | AATATATCAATAAGCAGCAT+TGG | + | chr3.3:86993802-86993821 | None:intergenic | 25.0% |
| ! | ACAATTGGAATCAATTACAT+GGG | - | chr3.3:86990864-86990883 | MS.gene02682:intron | 25.0% |
| ! | AGATAACAAGATTAACATCA+TGG | - | chr3.3:86993583-86993602 | MS.gene02682:intron | 25.0% |
| ! | AGCAACAAAGATATAGAAAT+TGG | + | chr3.3:86994847-86994866 | None:intergenic | 25.0% |
| ! | AGTGTATTGAACAATACTTA+AGG | - | chr3.3:86994319-86994338 | MS.gene02682:CDS | 25.0% |
| ! | ATAAAATGTAACTTCTGCAT+AGG | - | chr3.3:86993004-86993023 | MS.gene02682:intron | 25.0% |
| ! | ATATATACAATACCAAAGAG+AGG | - | chr3.3:86994820-86994839 | MS.gene02682:CDS | 25.0% |
| ! | ATATCATCCAATATAGAAAC+CGG | + | chr3.3:86990211-86990230 | None:intergenic | 25.0% |
| ! | ATGAATCTCTTGAAAAATGT+AGG | - | chr3.3:86991034-86991053 | MS.gene02682:CDS | 25.0% |
| ! | CAGAAAATATTAACCATAGA+AGG | - | chr3.3:86991891-86991910 | MS.gene02682:CDS | 25.0% |
| ! | CATTATATAGATGATGTTTG+TGG | + | chr3.3:86993427-86993446 | None:intergenic | 25.0% |
| ! | GTAGTGAAAGAAGAAAAATA+TGG | - | chr3.3:86992423-86992442 | MS.gene02682:intron | 25.0% |
| ! | TAGTTATAGTAGATAATACC+TGG | + | chr3.3:86992579-86992598 | None:intergenic | 25.0% |
| ! | TATATACAATACCAAAGAGA+GGG | - | chr3.3:86994821-86994840 | MS.gene02682:CDS | 25.0% |
| ! | TATGCAACAAGAAATTACAA+AGG | + | chr3.3:86994353-86994372 | None:intergenic | 25.0% |
| ! | TCACATAAAAATTTAGTACC+TGG | + | chr3.3:86992130-86992149 | None:intergenic | 25.0% |
| ! | TGTTGCATATAAGAGAATTA+AGG | - | chr3.3:86994364-86994383 | MS.gene02682:intron | 25.0% |
| ! | TTAATCTACACTAGTTAAGT+TGG | - | chr3.3:86994587-86994606 | MS.gene02682:CDS | 25.0% |
| ! | TTCAAGCAACAAAACTAATT+CGG | - | chr3.3:86993904-86993923 | MS.gene02682:CDS | 25.0% |
| ! | TTTCCTCTATTAAAAAGATG+AGG | + | chr3.3:86991238-86991257 | None:intergenic | 25.0% |
| !! | AATTTCTTGTGTAGAGTATT+TGG | - | chr3.3:86992856-86992875 | MS.gene02682:intron | 25.0% |
| !! | ACTGATGATAGCATAATTTT+TGG | - | chr3.3:86994743-86994762 | MS.gene02682:CDS | 25.0% |
| !! | ATTTTCTGTCATCTTTTTTC+AGG | - | chr3.3:86990656-86990675 | MS.gene02682:intron | 25.0% |
| !! | TATAAATACTGCCTTGATTT+TGG | - | chr3.3:86994484-86994503 | MS.gene02682:CDS | 25.0% |
| !! | TTTCCTCATCTTTTTAATAG+AGG | - | chr3.3:86991232-86991251 | MS.gene02682:intron | 25.0% |
| !!! | AGTTGATGATTCAAATTCAT+TGG | - | chr3.3:86993361-86993380 | MS.gene02682:intron | 25.0% |
| !!! | ATCTTTTTTCAGGACATAAT+AGG | - | chr3.3:86990666-86990685 | MS.gene02682:intron | 25.0% |
| AAACTTCCCTCTTAAAATCT+TGG | + | chr3.3:86990737-86990756 | None:intergenic | 30.0% | |
| AATTATTCGTAGAGAGAAAG+TGG | + | chr3.3:86993747-86993766 | None:intergenic | 30.0% | |
| AGCTATCTTAAAGACTTTAC+AGG | + | chr3.3:86991585-86991604 | None:intergenic | 30.0% | |
| ATCCTTACTATGAATGTCTT+TGG | - | chr3.3:86994162-86994181 | MS.gene02682:CDS | 30.0% | |
| ATCTATATAATGCTCATGCA+TGG | - | chr3.3:86993435-86993454 | MS.gene02682:intron | 30.0% | |
| ATTGGAAGAACATAGATTTG+AGG | - | chr3.3:86990159-86990178 | MS.gene02682:intron | 30.0% | |
| ATTTCATAGTTGCACTTTAC+AGG | - | chr3.3:86993854-86993873 | MS.gene02682:intron | 30.0% | |
| CAATCTAAACAGGTCTAATA+TGG | + | chr3.3:86991488-86991507 | None:intergenic | 30.0% | |
| GAAAATCCACAAAATTTGTG+CGG | + | chr3.3:86993281-86993300 | None:intergenic | 30.0% | |
| GCCATCAAATTTACAAATGA+AGG | - | chr3.3:86992300-86992319 | MS.gene02682:intron | 30.0% | |
| GCCTTCATTTGTAAATTTGA+TGG | + | chr3.3:86992304-86992323 | None:intergenic | 30.0% | |
| TAAACAGGTCTAATATGGAT+TGG | + | chr3.3:86991483-86991502 | None:intergenic | 30.0% | |
| TACTTTCACAGTTATTCACA+GGG | - | chr3.3:86994959-86994978 | MS.gene02682:CDS | 30.0% | |
| TCCAATGACAACATATCAAA+AGG | - | chr3.3:86993329-86993348 | MS.gene02682:intron | 30.0% | |
| TCCTTACTATGAATGTCTTT+GGG | - | chr3.3:86994163-86994182 | MS.gene02682:CDS | 30.0% | |
| TGTAGGTTAGAAAAAGAGAA+AGG | - | chr3.3:86991051-86991070 | MS.gene02682:CDS | 30.0% | |
| TTACAAATGAAGGCAAAGTA+GGG | - | chr3.3:86992310-86992329 | MS.gene02682:intron | 30.0% | |
| TTACTTTCACAGTTATTCAC+AGG | - | chr3.3:86994958-86994977 | MS.gene02682:CDS | 30.0% | |
| TTTACAAATGAAGGCAAAGT+AGG | - | chr3.3:86992309-86992328 | MS.gene02682:intron | 30.0% | |
| TTTCACTACATTCACAGAAA+TGG | + | chr3.3:86992412-86992431 | None:intergenic | 30.0% | |
| ! | ACTAATCTTTTGTACGCTTT+CGG | + | chr3.3:86992376-86992395 | None:intergenic | 30.0% |
| ! | AGAATGTTTTGCTAATGGTA+TGG | - | chr3.3:86994254-86994273 | MS.gene02682:CDS | 30.0% |
| ! | ATCTAGTTTATGTATCACTG+AGG | + | chr3.3:86991744-86991763 | None:intergenic | 30.0% |
| ! | GCAAAAAAGTATATGTATCC+TGG | + | chr3.3:86990946-86990965 | None:intergenic | 30.0% |
| ! | TCCTTTTGATATGTTGTCAT+TGG | + | chr3.3:86993333-86993352 | None:intergenic | 30.0% |
| ! | TCTTCAACAAGAAGGATTTT+AGG | + | chr3.3:86993566-86993585 | None:intergenic | 30.0% |
| ! | TCTTGTTATCTTCAACAAGA+AGG | + | chr3.3:86993574-86993593 | None:intergenic | 30.0% |
| ! | TTTAGGCTTTGATATGGATT+TGG | + | chr3.3:86993549-86993568 | None:intergenic | 30.0% |
| !! | AAGGATTTTAGGCTTTGATA+TGG | + | chr3.3:86993555-86993574 | None:intergenic | 30.0% |
| !! | AGATTTTAAGAGGGAAGTTT+TGG | - | chr3.3:86990737-86990756 | MS.gene02682:intron | 30.0% |
| !! | ATAAGTTGTTTTCAGCGTAT+CGG | - | chr3.3:86991532-86991551 | MS.gene02682:CDS | 30.0% |
| !! | TCTAATATGGATTGGAAACA+AGG | + | chr3.3:86991475-86991494 | None:intergenic | 30.0% |
| !!! | ACAACATTACTTTTTCTGCA+AGG | + | chr3.3:86990259-86990278 | None:intergenic | 30.0% |
| !!! | ACTTTTGAGACAGAACTATT+TGG | - | chr3.3:86990789-86990808 | MS.gene02682:intron | 30.0% |
| !!! | TTGGTGATGTTTTAAGGATT+CGG | - | chr3.3:86992085-86992104 | MS.gene02682:intron | 30.0% |
| AAAAAGGATTGCCTGCAAAA+AGG | - | chr3.3:86990760-86990779 | MS.gene02682:intron | 35.0% | |
| AAAACTAATTCGGTCTTTCG+AGG | - | chr3.3:86993914-86993933 | MS.gene02682:CDS | 35.0% | |
| AAAAGGATTGCCTGCAAAAA+GGG | - | chr3.3:86990761-86990780 | MS.gene02682:intron | 35.0% | |
| AAATGTGTCATCACCTCTAT+AGG | + | chr3.3:86991936-86991955 | None:intergenic | 35.0% | |
| AAGAATCTGCAATACCATTC+TGG | + | chr3.3:86993463-86993482 | None:intergenic | 35.0% | |
| ACAATCCATGATGAAACAGT+TGG | - | chr3.3:86993610-86993629 | MS.gene02682:CDS | 35.0% | |
| ACTAGCAATATGCAAACAAC+TGG | - | chr3.3:86992831-86992850 | MS.gene02682:intron | 35.0% | |
| ACTGATGTCGAAATATTCAC+TGG | - | chr3.3:86990693-86990712 | MS.gene02682:intron | 35.0% | |
| ACTTTCACAGTTATTCACAG+GGG | - | chr3.3:86994960-86994979 | MS.gene02682:CDS | 35.0% | |
| AGAACTGCATACCAAAATCA+AGG | + | chr3.3:86994498-86994517 | None:intergenic | 35.0% | |
| AGATTTGAGGACGAAAGATA+CGG | - | chr3.3:86990172-86990191 | MS.gene02682:intron | 35.0% | |
| AGTATGATACTGTTGTGTAC+TGG | - | chr3.3:86990311-86990330 | MS.gene02682:intron | 35.0% | |
| ATATAGAAACCGGTCGTTTA+TGG | + | chr3.3:86990201-86990220 | None:intergenic | 35.0% | |
| ATGTTGTCATTGGAAGTAGA+GGG | + | chr3.3:86993323-86993342 | None:intergenic | 35.0% | |
| ATTACCTCCTCATGTAAACT+TGG | + | chr3.3:86990577-86990596 | None:intergenic | 35.0% | |
| ATTTGAGAGAGTTCTTCAAC+AGG | + | chr3.3:86990448-86990467 | None:intergenic | 35.0% | |
| CAAAATGCTCCTGTTGTTAT+TGG | - | chr3.3:86990505-86990524 | MS.gene02682:intron | 35.0% | |
| CAACCTAAACAAACAAAGAC+AGG | - | chr3.3:86990111-86990130 | MS.gene02682:CDS | 35.0% | |
| CAATCAACCTGTTATGTGAA+TGG | + | chr3.3:86991138-86991157 | None:intergenic | 35.0% | |
| CAATCCATGATGAAACAGTT+GGG | - | chr3.3:86993611-86993630 | MS.gene02682:CDS | 35.0% | |
| CACATTCATACTTCCATACA+AGG | - | chr3.3:86993085-86993104 | MS.gene02682:intron | 35.0% | |
| CATAAATTACCATCAGAACC+AGG | + | chr3.3:86993703-86993722 | None:intergenic | 35.0% | |
| GATGTATATGATACAGGCAT+TGG | - | chr3.3:86992549-86992568 | MS.gene02682:CDS | 35.0% | |
| GCATGGTATAGTTATTAGCT+AGG | - | chr3.3:86994453-86994472 | MS.gene02682:intron | 35.0% | |
| GGTTAGAAAAAGAGAAAGGA+TGG | - | chr3.3:86991055-86991074 | MS.gene02682:CDS | 35.0% | |
| GGTTGTGATGTATATGATAC+AGG | - | chr3.3:86992543-86992562 | MS.gene02682:CDS | 35.0% | |
| GTGTCTAGCAAAGAACAAAA+TGG | - | chr3.3:86993053-86993072 | MS.gene02682:intron | 35.0% | |
| TAATGATGAGTGTAGATCTC+CGG | - | chr3.3:86992449-86992468 | MS.gene02682:intron | 35.0% | |
| TATGTTGTCATTGGAAGTAG+AGG | + | chr3.3:86993324-86993343 | None:intergenic | 35.0% | |
| TCCCAAAGACATTCATAGTA+AGG | + | chr3.3:86994167-86994186 | None:intergenic | 35.0% | |
| TCTGATGATACAACAACAGA+AGG | - | chr3.3:86993176-86993195 | MS.gene02682:CDS | 35.0% | |
| TGACATACTTGATCTTTCCA+AGG | - | chr3.3:86991427-86991446 | MS.gene02682:CDS | 35.0% | |
| TGCTTATATATCGTTCCAGA+GGG | - | chr3.3:86990963-86990982 | MS.gene02682:intron | 35.0% | |
| TGGAATCAATTACATGGGAA+TGG | - | chr3.3:86990869-86990888 | MS.gene02682:intron | 35.0% | |
| TGTTGAAGCTCTTCTTGAAA+AGG | - | chr3.3:86990606-86990625 | MS.gene02682:intron | 35.0% | |
| TTGCTTATATATCGTTCCAG+AGG | - | chr3.3:86990962-86990981 | MS.gene02682:intron | 35.0% | |
| TTTACACCTTCAGTGTGTAT+CGG | - | chr3.3:86992210-86992229 | MS.gene02682:CDS | 35.0% | |
| ! | AAAGTGATTTCCCTTTTTGC+AGG | + | chr3.3:86990774-86990793 | None:intergenic | 35.0% |
| ! | AGATGATATCAAGTTGCTTG+GGG | - | chr3.3:86994934-86994953 | MS.gene02682:CDS | 35.0% |
| ! | AGCGTACAAAAGATTAGTTC+AGG | - | chr3.3:86992378-86992397 | MS.gene02682:intron | 35.0% |
| ! | AGGAGAACCAAGATTTTAAG+AGG | - | chr3.3:86990727-86990746 | MS.gene02682:intron | 35.0% |
| ! | CAGATGATATCAAGTTGCTT+GGG | - | chr3.3:86994933-86994952 | MS.gene02682:CDS | 35.0% |
| ! | CATCCTGTCTTTGTTTGTTT+AGG | + | chr3.3:86990117-86990136 | None:intergenic | 35.0% |
| ! | CTAATCTTTTGTACGCTTTC+GGG | + | chr3.3:86992375-86992394 | None:intergenic | 35.0% |
| ! | CTACACAGAATGCAGATTTT+GGG | + | chr3.3:86991791-86991810 | None:intergenic | 35.0% |
| ! | GCTGAAGAATGTTTTGCTAA+TGG | - | chr3.3:86994249-86994268 | MS.gene02682:CDS | 35.0% |
| ! | GTATGGAAGTATGAATGTGA+AGG | + | chr3.3:86993084-86993103 | None:intergenic | 35.0% |
| ! | GTGTAGAGTATTTGGTTACA+TGG | - | chr3.3:86992864-86992883 | MS.gene02682:intron | 35.0% |
| ! | GTGTTGTCAATTAGTTTCGT+TGG | - | chr3.3:86994797-86994816 | MS.gene02682:CDS | 35.0% |
| ! | GTTACTCCCTACGAAATTTT+TGG | - | chr3.3:86990919-86990938 | MS.gene02682:intron | 35.0% |
| ! | TAAACGACCGGTTTCTATAT+TGG | - | chr3.3:86990201-86990220 | MS.gene02682:intron | 35.0% |
| ! | TATTTTCTGCAATGATGCTG+CGG | + | chr3.3:86991880-86991899 | None:intergenic | 35.0% |
| ! | TCAGATGATATCAAGTTGCT+TGG | - | chr3.3:86994932-86994951 | MS.gene02682:CDS | 35.0% |
| ! | TTATTGCCGCACAAATTTTG+TGG | - | chr3.3:86993272-86993291 | MS.gene02682:intron | 35.0% |
| ! | TTCAATTTTCGTAAACTCGC+AGG | + | chr3.3:86994297-86994316 | None:intergenic | 35.0% |
| !! | CTGGTTCTGATGGTAATTTA+TGG | - | chr3.3:86993701-86993720 | MS.gene02682:CDS | 35.0% |
| !! | GGAGAACCAAGATTTTAAGA+GGG | - | chr3.3:86990728-86990747 | MS.gene02682:intron | 35.0% |
| !!! | AAGAGGGAAGTTTTGGAAAA+AGG | - | chr3.3:86990744-86990763 | MS.gene02682:intron | 35.0% |
| !!! | AGGTCATTGGTGATGTTTTA+AGG | - | chr3.3:86992079-86992098 | MS.gene02682:intron | 35.0% |
| !!! | CAATAACAACAGGAGCATTT+TGG | + | chr3.3:86990507-86990526 | None:intergenic | 35.0% |
| !!! | CTTTCGGGTTTTGTAAAACT+TGG | + | chr3.3:86992360-86992379 | None:intergenic | 35.0% |
| AAAGACAGGATGTTGAGCTA+AGG | - | chr3.3:86990125-86990144 | MS.gene02682:intron | 40.0% | |
| AAAGCGAATTCCCATTGTTG+CGG | - | chr3.3:86994022-86994041 | MS.gene02682:intron | 40.0% | |
| AAGAGTGAATGCTCGATGAA+CGG | - | chr3.3:86992474-86992493 | MS.gene02682:CDS | 40.0% | |
| AATGCAACAACAGTGTGGAT+AGG | - | chr3.3:86992522-86992541 | MS.gene02682:CDS | 40.0% | |
| ACATGCTTTACTACCTCTCT+AGG | + | chr3.3:86991846-86991865 | None:intergenic | 40.0% | |
| ACTCAAATGCAACAACAGTG+TGG | - | chr3.3:86992517-86992536 | MS.gene02682:CDS | 40.0% | |
| ACTTAACCGATACACACTGA+AGG | + | chr3.3:86992219-86992238 | None:intergenic | 40.0% | |
| AGAGACTAGATGGCCTAAAT+TGG | + | chr3.3:86993222-86993241 | None:intergenic | 40.0% | |
| AGATTCTTCTCAGCATATGG+TGG | - | chr3.3:86993475-86993494 | MS.gene02682:intron | 40.0% | |
| AGCAGATGATGTACCTATAG+AGG | - | chr3.3:86991920-86991939 | MS.gene02682:CDS | 40.0% | |
| ATAGAAATTGGCCCTCTCTT+TGG | + | chr3.3:86994835-86994854 | None:intergenic | 40.0% | |
| ATCGAGCATTCACTCTTAAC+CGG | + | chr3.3:86992471-86992490 | None:intergenic | 40.0% | |
| ATCTGCTACATGTCCTTCTA+TGG | + | chr3.3:86991907-86991926 | None:intergenic | 40.0% | |
| ATGACCCAACTGTTTCATCA+TGG | + | chr3.3:86993618-86993637 | None:intergenic | 40.0% | |
| ATGCTAACAACACCAGAAAG+TGG | + | chr3.3:86991311-86991330 | None:intergenic | 40.0% | |
| ATGGGAATTCGCTTTGTAGA+TGG | + | chr3.3:86994017-86994036 | None:intergenic | 40.0% | |
| CAATTCCAACCTCCCAATTT+AGG | - | chr3.3:86993206-86993225 | MS.gene02682:CDS | 40.0% | |
| CATGTTGTCATCTGGAGATT+TGG | - | chr3.3:86991388-86991407 | MS.gene02682:CDS | 40.0% | |
| CATTCGTAATTGCAGGTCAT+TGG | - | chr3.3:86992066-86992085 | MS.gene02682:intron | 40.0% | |
| CCAAAATCTGCATTCTGTGT+AGG | - | chr3.3:86991789-86991808 | MS.gene02682:CDS | 40.0% | |
| CCACTTTCCAAGTTTACATG+AGG | - | chr3.3:86990567-86990586 | MS.gene02682:intron | 40.0% | |
| CCTCATGTAAACTTGGAAAG+TGG | + | chr3.3:86990570-86990589 | None:intergenic | 40.0% | |
| CCTGGTCCAAAAATTTCGTA+GGG | + | chr3.3:86990928-86990947 | None:intergenic | 40.0% | |
| CTAAATTGGGAGGTTGGAAT+TGG | + | chr3.3:86993208-86993227 | None:intergenic | 40.0% | |
| CTAGTGCATCCCAAAATCAA+GGG | - | chr3.3:86994425-86994444 | MS.gene02682:intron | 40.0% | |
| CTCAGATGAATTCTCAGACA+TGG | - | chr3.3:86993136-86993155 | MS.gene02682:CDS | 40.0% | |
| CTGTGTAGGAGTTATGAAGT+TGG | - | chr3.3:86991803-86991822 | MS.gene02682:CDS | 40.0% | |
| CTTTCCAAGTTTACATGAGG+AGG | - | chr3.3:86990570-86990589 | MS.gene02682:intron | 40.0% | |
| GAGACTAGATGGCCTAAATT+GGG | + | chr3.3:86993221-86993240 | None:intergenic | 40.0% | |
| GAGATAAGATCTCCACTTTC+TGG | - | chr3.3:86991296-86991315 | MS.gene02682:intron | 40.0% | |
| GATCTTTCCAAGGTTGAATC+AGG | - | chr3.3:86991437-86991456 | MS.gene02682:CDS | 40.0% | |
| GATGCACTTGGAAAAGTTGT+TGG | - | chr3.3:86990345-86990364 | MS.gene02682:intron | 40.0% | |
| GCTAAGGAAGTTGGAGATAT+TGG | - | chr3.3:86990141-86990160 | MS.gene02682:intron | 40.0% | |
| GCTTGAAGACCATCCATAAT+TGG | + | chr3.3:86993891-86993910 | None:intergenic | 40.0% | |
| GTCGAAATATTCACTGGATC+TGG | - | chr3.3:86990699-86990718 | MS.gene02682:intron | 40.0% | |
| TAAGAAGTCAATACTCCCTC+TGG | + | chr3.3:86990981-86991000 | None:intergenic | 40.0% | |
| TACCAAATTTCGACCTAGAG+AGG | - | chr3.3:86991830-86991849 | MS.gene02682:CDS | 40.0% | |
| TACCTCTCTAGGTCGAAATT+TGG | + | chr3.3:86991835-86991854 | None:intergenic | 40.0% | |
| TCATGTCCATCTAGTACACA+TGG | + | chr3.3:86991984-86992003 | None:intergenic | 40.0% | |
| TCCTGGTCCAAAAATTTCGT+AGG | + | chr3.3:86990929-86990948 | None:intergenic | 40.0% | |
| TCTGCTTCATTCGTAATTGC+AGG | - | chr3.3:86992059-86992078 | MS.gene02682:intron | 40.0% | |
| TGCAGATTCTTCTCAGCATA+TGG | - | chr3.3:86993472-86993491 | MS.gene02682:intron | 40.0% | |
| TTCCACCACAAAACTTGACA+AGG | - | chr3.3:86991343-86991362 | MS.gene02682:CDS | 40.0% | |
| TTGGATGTCATGTTGTCATC+TGG | - | chr3.3:86991380-86991399 | MS.gene02682:CDS | 40.0% | |
| TTTCCAACCTGATTCAACCT+TGG | + | chr3.3:86991447-86991466 | None:intergenic | 40.0% | |
| TTTCCAAGGTTGAATCAGGT+TGG | - | chr3.3:86991441-86991460 | MS.gene02682:CDS | 40.0% | |
| TTTCGAGGAAACAGGCAATT+GGG | - | chr3.3:86993929-86993948 | MS.gene02682:CDS | 40.0% | |
| ! | ATGCAGACTCCCTTGATTTT+GGG | + | chr3.3:86994437-86994456 | None:intergenic | 40.0% |
| ! | ATTCACTGGATCTGGTGTTA+AGG | - | chr3.3:86990707-86990726 | MS.gene02682:intron | 40.0% |
| ! | CCTACACAGAATGCAGATTT+TGG | + | chr3.3:86991792-86991811 | None:intergenic | 40.0% |
| ! | GAAACATTGGGAGTATAAGC+AGG | - | chr3.3:86990054-86990073 | MS.gene02682:CDS | 40.0% |
| ! | GATGATATCAAGTTGCTTGG+GGG | - | chr3.3:86994935-86994954 | MS.gene02682:CDS | 40.0% |
| ! | GATTGCTGTTCAGAAAGCAA+AGG | - | chr3.3:86991094-86991113 | MS.gene02682:CDS | 40.0% |
| ! | TATGAGAGCAAAGAAAGTGC+TGG | - | chr3.3:86991259-86991278 | MS.gene02682:intron | 40.0% |
| ! | TGTTGTCAATAATGGAGCAG+AGG | - | chr3.3:86993646-86993665 | MS.gene02682:CDS | 40.0% |
| ! | TTGCTCCTTGTCAAGTTTTG+TGG | + | chr3.3:86991351-86991370 | None:intergenic | 40.0% |
| ! | TTGGCTCTTGCACAACATAA+AGG | + | chr3.3:86992341-86992360 | None:intergenic | 40.0% |
| !! | ACTTTCTGGTGTTGTTAGCA+TGG | - | chr3.3:86991310-86991329 | MS.gene02682:intron | 40.0% |
| !! | TACATATGACCTGGTTCTGA+TGG | - | chr3.3:86993691-86993710 | MS.gene02682:CDS | 40.0% |
| !! | TCTGCATAGGTTGAGTTGAT+GGG | - | chr3.3:86993017-86993036 | MS.gene02682:intron | 40.0% |
| !! | TTCTGCATAGGTTGAGTTGA+TGG | - | chr3.3:86993016-86993035 | MS.gene02682:intron | 40.0% |
| ACCTCAACTCTTTGTCCTGA+TGG | + | chr3.3:86990531-86990550 | None:intergenic | 45.0% | |
| ACTAGATGGCCTAAATTGGG+AGG | + | chr3.3:86993218-86993237 | None:intergenic | 45.0% | |
| AGCAAGGCAGGTGAAACAAT+TGG | - | chr3.3:86990849-86990868 | MS.gene02682:intron | 45.0% | |
| ATTCGGTCTTTCGAGGAAAC+AGG | - | chr3.3:86993921-86993940 | MS.gene02682:CDS | 45.0% | |
| CAAAATCAAGGGAGTCTGCA+TGG | - | chr3.3:86994436-86994455 | MS.gene02682:intron | 45.0% | |
| CTTTCGAGGAAACAGGCAAT+TGG | - | chr3.3:86993928-86993947 | MS.gene02682:CDS | 45.0% | |
| GCACTTGGAAAAGTTGTTGG+AGG | - | chr3.3:86990348-86990367 | MS.gene02682:intron | 45.0% | |
| GCTAGTGCATCCCAAAATCA+AGG | - | chr3.3:86994424-86994443 | MS.gene02682:intron | 45.0% | |
| GGATGTGTGCATGCCAATTA+TGG | - | chr3.3:86993875-86993894 | MS.gene02682:intron | 45.0% | |
| GGATGTTGAGCTAAGGAAGT+TGG | - | chr3.3:86990132-86990151 | MS.gene02682:intron | 45.0% | |
| GGGAATGGATGTAACAGATC+AGG | - | chr3.3:86990884-86990903 | MS.gene02682:intron | 45.0% | |
| GTAGATCACGCTCGAAAGTA+TGG | - | chr3.3:86992793-86992812 | MS.gene02682:intron | 45.0% | |
| GTGTGCATGCCAATTATGGA+TGG | - | chr3.3:86993879-86993898 | MS.gene02682:intron | 45.0% | |
| GTGTTGCCATGTGTACTAGA+TGG | - | chr3.3:86991975-86991994 | MS.gene02682:CDS | 45.0% | |
| TCCTGATGGCCAATAACAAC+AGG | + | chr3.3:86990517-86990536 | None:intergenic | 45.0% | |
| TGGGATGCTGCAAAAAATGC+CGG | - | chr3.3:86993948-86993967 | MS.gene02682:CDS | 45.0% | |
| TGTAGAACCTGTCTTCAGCA+AGG | - | chr3.3:86990833-86990852 | MS.gene02682:intron | 45.0% | |
| TTTGAGGACGAAAGATACGG+AGG | - | chr3.3:86990175-86990194 | MS.gene02682:intron | 45.0% | |
| ! | ATCACGCTCGAAAGTATGGT+GGG | - | chr3.3:86992797-86992816 | MS.gene02682:intron | 45.0% |
| ! | CACAGAATGCAGATTTTGGG+AGG | + | chr3.3:86991788-86991807 | None:intergenic | 45.0% |
| ! | CATGCAGACTCCCTTGATTT+TGG | + | chr3.3:86994438-86994457 | None:intergenic | 45.0% |
| ! | TCCTGTTGTTATTGGCCATC+AGG | - | chr3.3:86990513-86990532 | MS.gene02682:intron | 45.0% |
| ! | TGTCAATAATGGAGCAGAGG+CGG | - | chr3.3:86993649-86993668 | MS.gene02682:CDS | 45.0% |
| !! | CCCTACGAAATTTTTGGACC+AGG | - | chr3.3:86990925-86990944 | MS.gene02682:intron | 45.0% |
| !! | CTCCTTGTCAAGTTTTGTGG+TGG | + | chr3.3:86991348-86991367 | None:intergenic | 45.0% |
| !! | GAATGCAGATTTTGGGAGGT+AGG | + | chr3.3:86991784-86991803 | None:intergenic | 45.0% |
| !! | GATACAGGCATTGGAATACC+AGG | - | chr3.3:86992558-86992577 | MS.gene02682:CDS | 45.0% |
| !!! | ATTTTGGGATGCACTAGCGA+AGG | + | chr3.3:86994422-86994441 | None:intergenic | 45.0% |
| ATACGGAGGCCATAAACGAC+CGG | - | chr3.3:86990189-86990208 | MS.gene02682:intron | 50.0% | |
| CAAGCGATCGAGACCTTGTA+TGG | + | chr3.3:86993101-86993120 | None:intergenic | 50.0% | |
| CAAGGAGCAAAGACAGCTGT+TGG | - | chr3.3:86991361-86991380 | MS.gene02682:CDS | 50.0% | |
| GATGGCCTAAATTGGGAGGT+TGG | + | chr3.3:86993214-86993233 | None:intergenic | 50.0% | |
| GCCATCAGGACAAAGAGTTG+AGG | - | chr3.3:86990527-86990546 | MS.gene02682:intron | 50.0% | |
| GCTCATGCATGGTTCCAGAA+TGG | - | chr3.3:86993446-86993465 | MS.gene02682:intron | 50.0% | |
| GGGTAGACTTTGCTCGATTC+CGG | + | chr3.3:86993970-86993989 | None:intergenic | 50.0% | |
| TCAGCGCTGTACATATGACC+TGG | - | chr3.3:86993682-86993701 | MS.gene02682:CDS | 50.0% | |
| ! | CTCGAAAGTATGGTGGGACA+GGG | - | chr3.3:86992803-86992822 | MS.gene02682:intron | 50.0% |
| ! | GATCACGCTCGAAAGTATGG+TGG | - | chr3.3:86992796-86992815 | MS.gene02682:intron | 50.0% |
| !! | GCATAGGTTGAGTTGATGGG+AGG | - | chr3.3:86993020-86993039 | MS.gene02682:intron | 50.0% |
| ATGATGCTGCGGCTGTCTGA+AGG | + | chr3.3:86991869-86991888 | None:intergenic | 55.0% | |
| CTCCGCTGGAAGAGACTAGA+TGG | + | chr3.3:86993232-86993251 | None:intergenic | 55.0% | |
| CTCGATGAACGGAGACACAG+AGG | - | chr3.3:86992485-86992504 | MS.gene02682:CDS | 55.0% | |
| GAAACAGCGAGCGATGCACT+TGG | - | chr3.3:86990333-86990352 | MS.gene02682:intron | 55.0% | |
| GAACCTGTCTTCAGCAAGGC+AGG | - | chr3.3:86990837-86990856 | MS.gene02682:intron | 55.0% | |
| GGCCATCTAGTCTCTTCCAG+CGG | - | chr3.3:86993227-86993246 | MS.gene02682:intron | 55.0% | |
| GTGAGTTCTGTTTGCTCCGC+TGG | + | chr3.3:86993246-86993265 | None:intergenic | 55.0% | |
| TCACCTGCCTTGCTGAAGAC+AGG | + | chr3.3:86990843-86990862 | None:intergenic | 55.0% | |
| ! | AAGTATGGTGGGACAGGGCT+AGG | - | chr3.3:86992808-86992827 | MS.gene02682:intron | 55.0% |
| ! | GCTCGAAAGTATGGTGGGAC+AGG | - | chr3.3:86992802-86992821 | MS.gene02682:intron | 55.0% |
| GGAGTATAAGCAGGCGAGCG+TGG | - | chr3.3:86990063-86990082 | MS.gene02682:CDS | 60.0% | |
| TGGAGCAGAGGCGGTGCGTG+CGG | - | chr3.3:86993658-86993677 | MS.gene02682:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 86990052 | 86994997 | 86990052 | ID=MS.gene02682 |
| chr3.3 | mRNA | 86990052 | 86994997 | 86990052 | ID=MS.gene02682.t1;Parent=MS.gene02682 |
| chr3.3 | exon | 86994458 | 86994997 | 86994458 | ID=MS.gene02682.t1.exon1;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86994458 | 86994997 | 86994458 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86994144 | 86994371 | 86994144 | ID=MS.gene02682.t1.exon2;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86994144 | 86994371 | 86994144 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86993900 | 86993993 | 86993900 | ID=MS.gene02682.t1.exon3;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86993900 | 86993993 | 86993900 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86993591 | 86993797 | 86993591 | ID=MS.gene02682.t1.exon4;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86993591 | 86993797 | 86993591 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86993108 | 86993238 | 86993108 | ID=MS.gene02682.t1.exon5;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86993108 | 86993238 | 86993108 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86992919 | 86992968 | 86992919 | ID=MS.gene02682.t1.exon6;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86992919 | 86992968 | 86992919 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86992470 | 86992753 | 86992470 | ID=MS.gene02682.t1.exon7;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86992470 | 86992753 | 86992470 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86992197 | 86992300 | 86992197 | ID=MS.gene02682.t1.exon8;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86992197 | 86992300 | 86992197 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86991337 | 86992023 | 86991337 | ID=MS.gene02682.t1.exon9;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86991337 | 86992023 | 86991337 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86991006 | 86991173 | 86991006 | ID=MS.gene02682.t1.exon10;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86991006 | 86991173 | 86991006 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| chr3.3 | exon | 86990052 | 86990135 | 86990052 | ID=MS.gene02682.t1.exon11;Parent=MS.gene02682.t1 |
| chr3.3 | CDS | 86990052 | 86990135 | 86990052 | ID=cds.MS.gene02682.t1;Parent=MS.gene02682.t1 |
| Gene Sequence |
| Protein sequence |
