Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026896.t1 | AES66525.2 | 98.4 | 243 | 4 | 0 | 1 | 243 | 73 | 315 | 1.80E-124 | 455.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026896.t1 | Q9ZV88 | 60.2 | 261 | 77 | 8 | 1 | 243 | 73 | 324 | 7.0e-61 | 235.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026896.t1 | G7IR04 | 98.4 | 243 | 4 | 0 | 1 | 243 | 73 | 315 | 1.3e-124 | 455.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene026896.t1 | TF | BES1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026896.t1 | MTR_2g075400 | 98.354 | 243 | 4 | 0 | 1 | 243 | 73 | 315 | 6.03e-175 | 491 |
| MS.gene026896.t1 | MTR_2g075410 | 67.600 | 250 | 74 | 1 | 1 | 243 | 73 | 322 | 1.09e-112 | 326 |
| MS.gene026896.t1 | MTR_2g075410 | 68.670 | 233 | 66 | 1 | 18 | 243 | 3 | 235 | 7.44e-105 | 303 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene026896.t1 | AT1G78700 | 60.536 | 261 | 76 | 8 | 1 | 243 | 73 | 324 | 2.61e-85 | 257 |
| MS.gene026896.t1 | AT4G18890 | 52.209 | 249 | 75 | 8 | 1 | 243 | 73 | 283 | 5.73e-64 | 201 |
| MS.gene026896.t1 | AT4G18890 | 51.429 | 245 | 75 | 8 | 5 | 243 | 1 | 207 | 4.44e-61 | 191 |
| MS.gene026896.t1 | AT1G19350 | 33.449 | 287 | 103 | 14 | 1 | 242 | 111 | 354 | 1.79e-14 | 72.4 |
| MS.gene026896.t1 | AT1G19350 | 33.449 | 287 | 103 | 14 | 1 | 242 | 89 | 332 | 2.20e-14 | 71.6 |
| MS.gene026896.t1 | AT1G19350 | 33.449 | 287 | 103 | 14 | 1 | 242 | 89 | 332 | 2.20e-14 | 71.6 |
| MS.gene026896.t1 | AT1G19350 | 33.449 | 287 | 103 | 14 | 1 | 242 | 89 | 332 | 2.20e-14 | 71.6 |
| MS.gene026896.t1 | AT1G19350 | 33.449 | 287 | 103 | 14 | 1 | 242 | 89 | 332 | 2.20e-14 | 71.6 |
| MS.gene026896.t1 | AT1G75080 | 30.662 | 287 | 111 | 14 | 1 | 242 | 90 | 333 | 1.81e-11 | 63.5 |
| MS.gene026896.t1 | AT1G75080 | 30.662 | 287 | 111 | 14 | 1 | 242 | 90 | 333 | 1.81e-11 | 63.5 |
Find 89 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAAGCCCGTTTGCCTTCA+AGG | 0.313190 | 2.3:+21328909 | MS.gene026896:CDS |
| TTGATCCCAGCAAACCATTC+AGG | 0.319016 | 2.3:-21328841 | None:intergenic |
| TACTCCTTCCTGCCTTCTTC+CGG | 0.325671 | 2.3:+21328787 | MS.gene026896:CDS |
| AAGGAAGACGAGCCGGGGCT+TGG | 0.330367 | 2.3:-21328514 | None:intergenic |
| CATTTGGAAGCAACACATTT+GGG | 0.336623 | 2.3:+21329064 | MS.gene026896:CDS |
| CTCTCCACAGCTTCATCTTC+AGG | 0.340264 | 2.3:+21328613 | MS.gene026896:CDS |
| ATGGAGCCACTATGAAAATA+AGG | 0.355143 | 2.3:-21328658 | None:intergenic |
| GCATTTGGAAGCAACACATT+TGG | 0.360050 | 2.3:+21329063 | MS.gene026896:CDS |
| ATGTGGACCCCTGGACAGTC+AGG | 0.369643 | 2.3:+21328961 | MS.gene026896:CDS |
| GCCTTTAGAGAACATGGATA+TGG | 0.373174 | 2.3:+21328450 | MS.gene026896:CDS |
| ATCTCAGATGAATTTGCATT+TGG | 0.385434 | 2.3:+21329048 | MS.gene026896:CDS |
| CTTGGGAAGGAAGACGAGCC+GGG | 0.389874 | 2.3:-21328520 | None:intergenic |
| TCTGCACGGCCCGGGTGGAC+TGG | 0.392696 | 2.3:+21328757 | MS.gene026896:CDS |
| GTTGATCCTGAATGGTTTGC+TGG | 0.393927 | 2.3:+21328835 | MS.gene026896:CDS |
| ACTATCTGACGGCCAGGGCT+TGG | 0.399313 | 2.3:-21328814 | None:intergenic |
| GAGCTCAGGGGAGGTGTGAC+AGG | 0.403615 | 2.3:-21328688 | None:intergenic |
| CATCTGCTACAAATTCTTCA+TGG | 0.405598 | 2.3:-21329116 | None:intergenic |
| AAATAAGGATGAGGAAGTTT+CGG | 0.409483 | 2.3:-21328643 | None:intergenic |
| CATTTGGGATTGTGAAGCCT+TGG | 0.410546 | 2.3:+21329079 | MS.gene026896:CDS |
| CCGTTTGCCTTCAAGGAAGA+TGG | 0.417625 | 2.3:+21328916 | MS.gene026896:CDS |
| TCAAAGCCTGCTGGAATAGC+TGG | 0.418647 | 2.3:-21328994 | None:intergenic |
| ACGGCCAGGGCTTGGAGGAC+CGG | 0.427775 | 2.3:-21328806 | None:intergenic |
| CATCTTCCTTGAAGGCAAAC+GGG | 0.432171 | 2.3:-21328915 | None:intergenic |
| GAACATGCCCCTGACTGTCC+AGG | 0.438349 | 2.3:-21328970 | None:intergenic |
| TTCTAGCAGTCGGAGAGCTC+AGG | 0.440476 | 2.3:-21328702 | None:intergenic |
| CCATCTTCCTTGAAGGCAAA+CGG | 0.441836 | 2.3:-21328916 | None:intergenic |
| TCTGAGATGGCTTCAGACAT+TGG | 0.466820 | 2.3:-21329033 | None:intergenic |
| AGATTGAATGTCGGAGAAGT+TGG | 0.467632 | 2.3:-21328880 | None:intergenic |
| GGGCTTGGAGGACCGGAAGA+AGG | 0.476639 | 2.3:-21328799 | None:intergenic |
| TGGATCCTTTCTCCTTCCCA+AGG | 0.477640 | 2.3:-21329096 | None:intergenic |
| CAGGCAGCGGTTCGCGCATG+TGG | 0.479649 | 2.3:+21328944 | MS.gene026896:CDS |
| GCGTTACGATTTGCAGCGTA+AGG | 0.480138 | 2.3:-21328556 | None:intergenic |
| ATGATCAATCTGCACGGCCC+GGG | 0.481435 | 2.3:+21328749 | MS.gene026896:CDS |
| ATCTGACGGCCAGGGCTTGG+AGG | 0.481702 | 2.3:-21328811 | None:intergenic |
| GTCAGATAGTTGATCCTGAA+TGG | 0.488622 | 2.3:+21328827 | MS.gene026896:CDS |
| ATTTGGGATTGTGAAGCCTT+GGG | 0.491602 | 2.3:+21329080 | MS.gene026896:CDS |
| ACTTGGGAAGGAAGACGAGC+CGG | 0.496049 | 2.3:-21328521 | None:intergenic |
| TCTTCCGGTCCTCCAAGCCC+TGG | 0.498896 | 2.3:+21328802 | MS.gene026896:CDS |
| AAATGCAAATTCATCTGAGA+TGG | 0.501657 | 2.3:-21329046 | None:intergenic |
| GATGATCAATCTGCACGGCC+CGG | 0.503778 | 2.3:+21328748 | MS.gene026896:CDS |
| TAAGGGGATGAAGATGGACT+TGG | 0.504786 | 2.3:-21328538 | None:intergenic |
| TTGGAGGACCGGAAGAAGGC+AGG | 0.505728 | 2.3:-21328795 | None:intergenic |
| TGAAGCCTTGGGAAGGAGAA+AGG | 0.506728 | 2.3:+21329091 | MS.gene026896:CDS |
| TGTTCTCCAGCTATTCCAGC+AGG | 0.507117 | 2.3:+21328988 | MS.gene026896:CDS |
| GGATCAACTATCTGACGGCC+AGG | 0.508622 | 2.3:-21328820 | None:intergenic |
| ATGGTAATTCCCTCATTCCA+TGG | 0.516736 | 2.3:+21328581 | MS.gene026896:CDS |
| AGGTGTGACAGGAGCACTGA+TGG | 0.518748 | 2.3:-21328677 | None:intergenic |
| ACCATATCCATGTTCTCTAA+AGG | 0.525017 | 2.3:-21328451 | None:intergenic |
| GCAGTTTGATCAAAGCCTGC+TGG | 0.525201 | 2.3:-21329003 | None:intergenic |
| GAGAACATGGATATGGTTGG+TGG | 0.530636 | 2.3:+21328457 | MS.gene026896:CDS |
| CGTTACGATTTGCAGCGTAA+GGG | 0.534170 | 2.3:-21328555 | None:intergenic |
| AAGACGAGCCGGGGCTTGGA+TGG | 0.534291 | 2.3:-21328510 | None:intergenic |
| GTTACGATTTGCAGCGTAAG+GGG | 0.536907 | 2.3:-21328554 | None:intergenic |
| GCTGCAAATCGTAACGCTGA+TGG | 0.540162 | 2.3:+21328562 | MS.gene026896:CDS |
| TTGGGAAGGAAGACGAGCCG+GGG | 0.553399 | 2.3:-21328519 | None:intergenic |
| TCTAGCAGTCGGAGAGCTCA+GGG | 0.554727 | 2.3:-21328701 | None:intergenic |
| AACATGCCCCTGACTGTCCA+GGG | 0.556233 | 2.3:-21328969 | None:intergenic |
| CCACTATGAAAATAAGGATG+AGG | 0.557357 | 2.3:-21328652 | None:intergenic |
| GTAATGTTGTCCAGTCCACC+CGG | 0.557358 | 2.3:-21328767 | None:intergenic |
| GGTTCGCGCATGTGGACCCC+TGG | 0.559214 | 2.3:+21328952 | MS.gene026896:CDS |
| GGATGAAGATGGACTTGGGA+AGG | 0.561521 | 2.3:-21328533 | None:intergenic |
| TCATCTTACCATCCAAGCCC+CGG | 0.562153 | 2.3:+21328502 | MS.gene026896:CDS |
| GCAGCGTAAGGGGATGAAGA+TGG | 0.565277 | 2.3:-21328544 | None:intergenic |
| ATCAATCTGCACGGCCCGGG+TGG | 0.570226 | 2.3:+21328752 | MS.gene026896:CDS |
| TTGATCCTGAATGGTTTGCT+GGG | 0.572973 | 2.3:+21328836 | MS.gene026896:CDS |
| TGTGGACCCCTGGACAGTCA+GGG | 0.577345 | 2.3:+21328962 | MS.gene026896:CDS |
| ATGCAAGCCTTTAGAGAACA+TGG | 0.577571 | 2.3:+21328444 | MS.gene026896:CDS |
| GGGATTGTGAAGCCTTGGGA+AGG | 0.580106 | 2.3:+21329084 | MS.gene026896:CDS |
| TTAGAGAACATGGATATGGT+TGG | 0.590409 | 2.3:+21328454 | MS.gene026896:CDS |
| AGGACCGGAAGAAGGCAGGA+AGG | 0.591677 | 2.3:-21328791 | None:intergenic |
| GTGGACCCCTGGACAGTCAG+GGG | 0.607774 | 2.3:+21328963 | MS.gene026896:CDS |
| CGAGATACAAGATTGAATGT+CGG | 0.609297 | 2.3:-21328889 | None:intergenic |
| CTTGGATGGTAAGATGAACA+AGG | 0.613106 | 2.3:-21328496 | None:intergenic |
| GATCAACTATCTGACGGCCA+GGG | 0.614613 | 2.3:-21328819 | None:intergenic |
| AATCGCGGTGTTCTAGCAGT+CGG | 0.621032 | 2.3:-21328712 | None:intergenic |
| CACTTGGTAACTCAAAGACC+AGG | 0.624367 | 2.3:+21329151 | MS.gene026896:CDS |
| GATGATCTTGAACTCACACT+TGG | 0.629133 | 2.3:+21329135 | MS.gene026896:CDS |
| AAGGGGATGAAGATGGACTT+GGG | 0.629431 | 2.3:-21328537 | None:intergenic |
| CTGAAGATGAAGCTGTGGAG+AGG | 0.631008 | 2.3:-21328612 | None:intergenic |
| GCAGTCGGAGAGCTCAGGGG+AGG | 0.643740 | 2.3:-21328697 | None:intergenic |
| TGATCCTGAAGATGAAGCTG+TGG | 0.648099 | 2.3:-21328617 | None:intergenic |
| GGAGAAGTTGGACTAGCATG+TGG | 0.648324 | 2.3:-21328868 | None:intergenic |
| TAATGTTGTCCAGTCCACCC+GGG | 0.661081 | 2.3:-21328766 | None:intergenic |
| ACATGCCCCTGACTGTCCAG+GGG | 0.666992 | 2.3:-21328968 | None:intergenic |
| CTAGCAGTCGGAGAGCTCAG+GGG | 0.684940 | 2.3:-21328700 | None:intergenic |
| ATTCAGGATCAACTATCTGA+CGG | 0.695991 | 2.3:-21328825 | None:intergenic |
| TTGGATGGTAAGATGAACAA+GGG | 0.701552 | 2.3:-21328495 | None:intergenic |
| ACTTCGATGATCAATCTGCA+CGG | 0.712290 | 2.3:+21328743 | MS.gene026896:CDS |
| TCGAAGTCAGCATTCAATCG+CGG | 0.720698 | 2.3:-21328727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAATAAGGATGAGGAAGTTT+CGG | - | chr2.3:21328646-21328665 | None:intergenic | 30.0% | |
| AAATGCAAATTCATCTGAGA+TGG | - | chr2.3:21329049-21329068 | None:intergenic | 30.0% | |
| ATCTCAGATGAATTTGCATT+TGG | + | chr2.3:21329048-21329067 | MS.gene026896:CDS | 30.0% | |
| ACCATATCCATGTTCTCTAA+AGG | - | chr2.3:21328454-21328473 | None:intergenic | 35.0% | |
| ATGGAGCCACTATGAAAATA+AGG | - | chr2.3:21328661-21328680 | None:intergenic | 35.0% | |
| ATTCAGGATCAACTATCTGA+CGG | - | chr2.3:21328828-21328847 | None:intergenic | 35.0% | |
| CATCTGCTACAAATTCTTCA+TGG | - | chr2.3:21329119-21329138 | None:intergenic | 35.0% | |
| CATTTGGAAGCAACACATTT+GGG | + | chr2.3:21329064-21329083 | MS.gene026896:CDS | 35.0% | |
| CCACTATGAAAATAAGGATG+AGG | - | chr2.3:21328655-21328674 | None:intergenic | 35.0% | |
| CGAGATACAAGATTGAATGT+CGG | - | chr2.3:21328892-21328911 | None:intergenic | 35.0% | |
| TGAAAAACCATCTTCCTTGA+AGG | - | chr2.3:21328926-21328945 | None:intergenic | 35.0% | |
| TTAGAGAACATGGATATGGT+TGG | + | chr2.3:21328454-21328473 | MS.gene026896:CDS | 35.0% | |
| TTGGATGGTAAGATGAACAA+GGG | - | chr2.3:21328498-21328517 | None:intergenic | 35.0% | |
| ! | TTCAAGGAAGATGGTTTTTC+AGG | + | chr2.3:21328925-21328944 | MS.gene026896:CDS | 35.0% |
| !!! | CCTCATCCTTATTTTCATAG+TGG | + | chr2.3:21328652-21328671 | MS.gene026896:CDS | 35.0% |
| ACTTCGATGATCAATCTGCA+CGG | + | chr2.3:21328743-21328762 | MS.gene026896:CDS | 40.0% | |
| AGATTGAATGTCGGAGAAGT+TGG | - | chr2.3:21328883-21328902 | None:intergenic | 40.0% | |
| ATGGTAATTCCCTCATTCCA+TGG | + | chr2.3:21328581-21328600 | MS.gene026896:CDS | 40.0% | |
| CTTGGATGGTAAGATGAACA+AGG | - | chr2.3:21328499-21328518 | None:intergenic | 40.0% | |
| GATGATCTTGAACTCACACT+TGG | + | chr2.3:21329135-21329154 | MS.gene026896:CDS | 40.0% | |
| GCATTTGGAAGCAACACATT+TGG | + | chr2.3:21329063-21329082 | MS.gene026896:CDS | 40.0% | |
| GTCAGATAGTTGATCCTGAA+TGG | + | chr2.3:21328827-21328846 | MS.gene026896:CDS | 40.0% | |
| ! | ACTTGGTAACTCAAAGACCA+GGG | + | chr2.3:21329152-21329171 | MS.gene026896:CDS | 40.0% |
| ! | ATGCAAGCCTTTAGAGAACA+TGG | + | chr2.3:21328444-21328463 | MS.gene026896:CDS | 40.0% |
| ! | ATTTGGGATTGTGAAGCCTT+GGG | + | chr2.3:21329080-21329099 | MS.gene026896:CDS | 40.0% |
| ! | GCCTTTAGAGAACATGGATA+TGG | + | chr2.3:21328450-21328469 | MS.gene026896:CDS | 40.0% |
| !! | GTTTTTGAGCCATGGAATGA+GGG | - | chr2.3:21328593-21328612 | None:intergenic | 40.0% |
| !! | TTGATCCTGAATGGTTTGCT+GGG | + | chr2.3:21328836-21328855 | MS.gene026896:CDS | 40.0% |
| CATCTTCCTTGAAGGCAAAC+GGG | - | chr2.3:21328918-21328937 | None:intergenic | 45.0% | |
| CCATCTTCCTTGAAGGCAAA+CGG | - | chr2.3:21328919-21328938 | None:intergenic | 45.0% | |
| CGTTACGATTTGCAGCGTAA+GGG | - | chr2.3:21328558-21328577 | None:intergenic | 45.0% | |
| GAGAACATGGATATGGTTGG+TGG | + | chr2.3:21328457-21328476 | MS.gene026896:CDS | 45.0% | |
| GTTACGATTTGCAGCGTAAG+GGG | - | chr2.3:21328557-21328576 | None:intergenic | 45.0% | |
| TCGAAGTCAGCATTCAATCG+CGG | - | chr2.3:21328730-21328749 | None:intergenic | 45.0% | |
| TGATCCTGAAGATGAAGCTG+TGG | - | chr2.3:21328620-21328639 | None:intergenic | 45.0% | |
| TTGATCCCAGCAAACCATTC+AGG | - | chr2.3:21328844-21328863 | None:intergenic | 45.0% | |
| ! | AAGGGGATGAAGATGGACTT+GGG | - | chr2.3:21328540-21328559 | None:intergenic | 45.0% |
| ! | CACTTGGTAACTCAAAGACC+AGG | + | chr2.3:21329151-21329170 | MS.gene026896:CDS | 45.0% |
| ! | CATTTGGGATTGTGAAGCCT+TGG | + | chr2.3:21329079-21329098 | MS.gene026896:CDS | 45.0% |
| ! | GTTGATCCTGAATGGTTTGC+TGG | + | chr2.3:21328835-21328854 | MS.gene026896:CDS | 45.0% |
| ! | TAAGGGGATGAAGATGGACT+TGG | - | chr2.3:21328541-21328560 | None:intergenic | 45.0% |
| ! | TCTGAGATGGCTTCAGACAT+TGG | - | chr2.3:21329036-21329055 | None:intergenic | 45.0% |
| !! | GGTTTTTGAGCCATGGAATG+AGG | - | chr2.3:21328594-21328613 | None:intergenic | 45.0% |
| !!! | GAAGATGGTTTTTCAGGCAG+CGG | + | chr2.3:21328931-21328950 | MS.gene026896:CDS | 45.0% |
| AATCGCGGTGTTCTAGCAGT+CGG | - | chr2.3:21328715-21328734 | None:intergenic | 50.0% | |
| CCGTTTGCCTTCAAGGAAGA+TGG | + | chr2.3:21328916-21328935 | MS.gene026896:CDS | 50.0% | |
| CTCTCCACAGCTTCATCTTC+AGG | + | chr2.3:21328613-21328632 | MS.gene026896:CDS | 50.0% | |
| CTGAAGATGAAGCTGTGGAG+AGG | - | chr2.3:21328615-21328634 | None:intergenic | 50.0% | |
| GATCAACTATCTGACGGCCA+GGG | - | chr2.3:21328822-21328841 | None:intergenic | 50.0% | |
| GCAGTTTGATCAAAGCCTGC+TGG | - | chr2.3:21329006-21329025 | None:intergenic | 50.0% | |
| GCGTTACGATTTGCAGCGTA+AGG | - | chr2.3:21328559-21328578 | None:intergenic | 50.0% | |
| GCTGCAAATCGTAACGCTGA+TGG | + | chr2.3:21328562-21328581 | MS.gene026896:CDS | 50.0% | |
| GTAATGTTGTCCAGTCCACC+CGG | - | chr2.3:21328770-21328789 | None:intergenic | 50.0% | |
| TAATGTTGTCCAGTCCACCC+GGG | - | chr2.3:21328769-21328788 | None:intergenic | 50.0% | |
| TACTCCTTCCTGCCTTCTTC+CGG | + | chr2.3:21328787-21328806 | MS.gene026896:CDS | 50.0% | |
| TCAAAGCCTGCTGGAATAGC+TGG | - | chr2.3:21328997-21329016 | None:intergenic | 50.0% | |
| TCATCTTACCATCCAAGCCC+CGG | + | chr2.3:21328502-21328521 | MS.gene026896:CDS | 50.0% | |
| TGAAGCCTTGGGAAGGAGAA+AGG | + | chr2.3:21329091-21329110 | MS.gene026896:CDS | 50.0% | |
| TGGATCCTTTCTCCTTCCCA+AGG | - | chr2.3:21329099-21329118 | None:intergenic | 50.0% | |
| TGTTCTCCAGCTATTCCAGC+AGG | + | chr2.3:21328988-21329007 | MS.gene026896:CDS | 50.0% | |
| ! | GGATGAAGATGGACTTGGGA+AGG | - | chr2.3:21328536-21328555 | None:intergenic | 50.0% |
| !! | GGAGAAGTTGGACTAGCATG+TGG | - | chr2.3:21328871-21328890 | None:intergenic | 50.0% |
| !! | GTGGAGAGGTTTTTGAGCCA+TGG | - | chr2.3:21328601-21328620 | None:intergenic | 50.0% |
| AACATGCCCCTGACTGTCCA+GGG | - | chr2.3:21328972-21328991 | None:intergenic | 55.0% | |
| ACTTGGGAAGGAAGACGAGC+CGG | - | chr2.3:21328524-21328543 | None:intergenic | 55.0% | |
| ATGATCAATCTGCACGGCCC+GGG | + | chr2.3:21328749-21328768 | MS.gene026896:CDS | 55.0% | |
| GATGATCAATCTGCACGGCC+CGG | + | chr2.3:21328748-21328767 | MS.gene026896:CDS | 55.0% | |
| GCAGCGTAAGGGGATGAAGA+TGG | - | chr2.3:21328547-21328566 | None:intergenic | 55.0% | |
| GGATCAACTATCTGACGGCC+AGG | - | chr2.3:21328823-21328842 | None:intergenic | 55.0% | |
| GGGATTGTGAAGCCTTGGGA+AGG | + | chr2.3:21329084-21329103 | MS.gene026896:CDS | 55.0% | |
| TCGAAGCCCGTTTGCCTTCA+AGG | + | chr2.3:21328909-21328928 | MS.gene026896:CDS | 55.0% | |
| TCTAGCAGTCGGAGAGCTCA+GGG | - | chr2.3:21328704-21328723 | None:intergenic | 55.0% | |
| TTCTAGCAGTCGGAGAGCTC+AGG | - | chr2.3:21328705-21328724 | None:intergenic | 55.0% | |
| !! | AGGTGTGACAGGAGCACTGA+TGG | - | chr2.3:21328680-21328699 | None:intergenic | 55.0% |
| ACATGCCCCTGACTGTCCAG+GGG | - | chr2.3:21328971-21328990 | None:intergenic | 60.0% | |
| ACTATCTGACGGCCAGGGCT+TGG | - | chr2.3:21328817-21328836 | None:intergenic | 60.0% | |
| AGGACCGGAAGAAGGCAGGA+AGG | - | chr2.3:21328794-21328813 | None:intergenic | 60.0% | |
| ATGTGGACCCCTGGACAGTC+AGG | + | chr2.3:21328961-21328980 | MS.gene026896:CDS | 60.0% | |
| CTAGCAGTCGGAGAGCTCAG+GGG | - | chr2.3:21328703-21328722 | None:intergenic | 60.0% | |
| CTTGGGAAGGAAGACGAGCC+GGG | - | chr2.3:21328523-21328542 | None:intergenic | 60.0% | |
| GAACATGCCCCTGACTGTCC+AGG | - | chr2.3:21328973-21328992 | None:intergenic | 60.0% | |
| TGTGGACCCCTGGACAGTCA+GGG | + | chr2.3:21328962-21328981 | MS.gene026896:CDS | 60.0% | |
| TTGGAGGACCGGAAGAAGGC+AGG | - | chr2.3:21328798-21328817 | None:intergenic | 60.0% | |
| TTGGGAAGGAAGACGAGCCG+GGG | - | chr2.3:21328522-21328541 | None:intergenic | 60.0% | |
| AAGACGAGCCGGGGCTTGGA+TGG | - | chr2.3:21328513-21328532 | None:intergenic | 65.0% | |
| AAGGAAGACGAGCCGGGGCT+TGG | - | chr2.3:21328517-21328536 | None:intergenic | 65.0% | |
| ATCAATCTGCACGGCCCGGG+TGG | + | chr2.3:21328752-21328771 | MS.gene026896:CDS | 65.0% | |
| ATCTGACGGCCAGGGCTTGG+AGG | - | chr2.3:21328814-21328833 | None:intergenic | 65.0% | |
| GGGCTTGGAGGACCGGAAGA+AGG | - | chr2.3:21328802-21328821 | None:intergenic | 65.0% | |
| GTGGACCCCTGGACAGTCAG+GGG | + | chr2.3:21328963-21328982 | MS.gene026896:CDS | 65.0% | |
| TCTTCCGGTCCTCCAAGCCC+TGG | + | chr2.3:21328802-21328821 | MS.gene026896:CDS | 65.0% | |
| ! | GAGCTCAGGGGAGGTGTGAC+AGG | - | chr2.3:21328691-21328710 | None:intergenic | 65.0% |
| ACGGCCAGGGCTTGGAGGAC+CGG | - | chr2.3:21328809-21328828 | None:intergenic | 70.0% | |
| CAGGCAGCGGTTCGCGCATG+TGG | + | chr2.3:21328944-21328963 | MS.gene026896:CDS | 70.0% | |
| GCAGTCGGAGAGCTCAGGGG+AGG | - | chr2.3:21328700-21328719 | None:intergenic | 70.0% | |
| GGTTCGCGCATGTGGACCCC+TGG | + | chr2.3:21328952-21328971 | MS.gene026896:CDS | 70.0% | |
| TCTGCACGGCCCGGGTGGAC+TGG | + | chr2.3:21328757-21328776 | MS.gene026896:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 21328442 | 21329172 | 21328442 | ID=MS.gene026896 |
| chr2.3 | mRNA | 21328442 | 21329172 | 21328442 | ID=MS.gene026896.t1;Parent=MS.gene026896 |
| chr2.3 | exon | 21328442 | 21329172 | 21328442 | ID=MS.gene026896.t1.exon1;Parent=MS.gene026896.t1 |
| chr2.3 | CDS | 21328442 | 21329172 | 21328442 | ID=cds.MS.gene026896.t1;Parent=MS.gene026896.t1 |
| Gene Sequence |
| Protein sequence |