Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027369.t1 | AES79015.2 | 84.3 | 561 | 37 | 4 | 1 | 515 | 1 | 556 | 7.90E-239 | 836.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027369.t1 | Q8GZB6 | 54.0 | 337 | 148 | 5 | 184 | 515 | 290 | 624 | 1.7e-101 | 371.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027369.t1 | G7KY38 | 84.3 | 561 | 37 | 4 | 1 | 515 | 1 | 556 | 5.7e-239 | 836.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene027369.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027369.t1 | MTR_7g052480 | 86.096 | 561 | 27 | 4 | 1 | 515 | 1 | 556 | 0.0 | 962 |
MS.gene027369.t1 | MTR_7g084090 | 55.357 | 336 | 146 | 3 | 184 | 515 | 422 | 757 | 6.91e-124 | 380 |
MS.gene027369.t1 | MTR_6g061270 | 55.060 | 336 | 147 | 3 | 184 | 515 | 359 | 694 | 9.00e-122 | 373 |
MS.gene027369.t1 | MTR_6g061200 | 51.190 | 336 | 131 | 4 | 184 | 515 | 359 | 665 | 5.62e-107 | 333 |
MS.gene027369.t1 | MTR_5g013420 | 46.207 | 290 | 142 | 8 | 229 | 515 | 811 | 1089 | 2.41e-69 | 241 |
MS.gene027369.t1 | MTR_5g013420 | 45.862 | 290 | 143 | 8 | 229 | 515 | 811 | 1089 | 2.56e-68 | 238 |
MS.gene027369.t1 | MTR_4g010830 | 43.537 | 294 | 152 | 9 | 225 | 515 | 698 | 980 | 1.54e-64 | 226 |
MS.gene027369.t1 | MTR_7g084090 | 49.321 | 221 | 108 | 3 | 184 | 400 | 422 | 642 | 1.15e-63 | 219 |
MS.gene027369.t1 | MTR_4g010550 | 39.249 | 293 | 148 | 7 | 226 | 515 | 199 | 464 | 1.55e-56 | 196 |
MS.gene027369.t1 | MTR_7g088370 | 30.816 | 331 | 200 | 6 | 186 | 511 | 395 | 701 | 1.26e-46 | 173 |
MS.gene027369.t1 | MTR_3g011440 | 31.566 | 396 | 229 | 12 | 151 | 511 | 272 | 660 | 2.07e-43 | 163 |
MS.gene027369.t1 | MTR_8g042750 | 34.471 | 293 | 179 | 6 | 225 | 511 | 399 | 684 | 3.10e-43 | 163 |
MS.gene027369.t1 | MTR_7g445710 | 33.663 | 303 | 155 | 10 | 225 | 515 | 275 | 543 | 2.35e-42 | 159 |
MS.gene027369.t1 | MTR_8g070075 | 32.680 | 306 | 188 | 10 | 186 | 485 | 456 | 749 | 6.96e-42 | 160 |
MS.gene027369.t1 | MTR_8g070070 | 33.660 | 306 | 185 | 10 | 186 | 485 | 463 | 756 | 4.52e-41 | 157 |
MS.gene027369.t1 | MTR_1g035420 | 33.013 | 312 | 195 | 8 | 186 | 493 | 352 | 653 | 1.31e-40 | 155 |
MS.gene027369.t1 | MTR_1g035400 | 32.372 | 312 | 193 | 9 | 186 | 491 | 271 | 570 | 1.47e-39 | 151 |
MS.gene027369.t1 | MTR_8g071030 | 35.249 | 261 | 154 | 7 | 229 | 485 | 487 | 736 | 2.27e-39 | 152 |
MS.gene027369.t1 | MTR_7g450730 | 32.069 | 290 | 145 | 7 | 228 | 515 | 266 | 505 | 1.96e-38 | 147 |
MS.gene027369.t1 | MTR_0376s0030 | 31.511 | 311 | 189 | 11 | 186 | 485 | 264 | 561 | 3.42e-36 | 142 |
MS.gene027369.t1 | MTR_8g078490 | 30.145 | 345 | 171 | 11 | 210 | 515 | 940 | 1253 | 1.60e-34 | 139 |
MS.gene027369.t1 | MTR_1g048950 | 33.227 | 313 | 161 | 10 | 210 | 515 | 262 | 533 | 5.17e-34 | 135 |
MS.gene027369.t1 | MTR_6g044690 | 28.615 | 325 | 184 | 11 | 184 | 485 | 264 | 563 | 3.80e-32 | 130 |
MS.gene027369.t1 | MTR_7g445530 | 32.721 | 272 | 137 | 10 | 225 | 484 | 275 | 512 | 3.86e-32 | 129 |
MS.gene027369.t1 | MTR_5g018850 | 30.723 | 332 | 158 | 11 | 225 | 515 | 1207 | 1507 | 1.52e-30 | 127 |
MS.gene027369.t1 | MTR_4g132610 | 36.652 | 221 | 115 | 5 | 296 | 515 | 851 | 1047 | 2.28e-30 | 126 |
MS.gene027369.t1 | MTR_1g069570 | 30.792 | 341 | 150 | 14 | 229 | 511 | 430 | 742 | 2.35e-30 | 125 |
MS.gene027369.t1 | MTR_6g043960 | 30.258 | 271 | 166 | 10 | 225 | 485 | 224 | 481 | 2.19e-28 | 118 |
MS.gene027369.t1 | MTR_1g080340 | 30.499 | 341 | 158 | 13 | 228 | 513 | 268 | 584 | 2.81e-28 | 119 |
MS.gene027369.t1 | MTR_8g078505 | 35.616 | 219 | 105 | 5 | 297 | 510 | 346 | 533 | 2.39e-27 | 115 |
MS.gene027369.t1 | MTR_7g098390 | 28.743 | 334 | 164 | 11 | 229 | 511 | 388 | 698 | 1.71e-25 | 110 |
MS.gene027369.t1 | MTR_2g054460 | 29.858 | 211 | 119 | 4 | 287 | 485 | 270 | 463 | 1.47e-23 | 103 |
MS.gene027369.t1 | MTR_7g445600 | 32.692 | 156 | 62 | 1 | 329 | 484 | 243 | 355 | 8.60e-22 | 97.1 |
MS.gene027369.t1 | MTR_1g069570 | 29.779 | 272 | 109 | 12 | 229 | 443 | 430 | 676 | 1.73e-19 | 92.4 |
MS.gene027369.t1 | MTR_1g012890 | 28.814 | 177 | 92 | 5 | 338 | 514 | 225 | 367 | 3.97e-12 | 68.2 |
MS.gene027369.t1 | MTR_1g064770 | 47.368 | 57 | 29 | 1 | 312 | 367 | 31 | 87 | 1.75e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027369.t1 | AT5G13960 | 55.357 | 336 | 145 | 4 | 184 | 515 | 156 | 490 | 6.91e-129 | 384 |
MS.gene027369.t1 | AT5G13960 | 55.357 | 336 | 145 | 4 | 184 | 515 | 290 | 624 | 3.38e-128 | 387 |
MS.gene027369.t1 | AT2G22740 | 38.629 | 321 | 155 | 9 | 214 | 515 | 493 | 790 | 2.70e-56 | 201 |
MS.gene027369.t1 | AT2G22740 | 38.629 | 321 | 155 | 9 | 214 | 515 | 493 | 790 | 2.70e-56 | 201 |
MS.gene027369.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 439 | 758 | 1.56e-55 | 199 |
MS.gene027369.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027369.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027369.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027369.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027369.t1 | AT1G73100 | 30.155 | 388 | 250 | 10 | 129 | 511 | 294 | 665 | 1.96e-46 | 172 |
MS.gene027369.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027369.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027369.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027369.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027369.t1 | AT4G13460 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 1.10e-41 | 158 |
MS.gene027369.t1 | AT4G13460 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 1.10e-41 | 158 |
MS.gene027369.t1 | AT5G04940 | 32.660 | 297 | 188 | 7 | 219 | 511 | 378 | 666 | 2.17e-41 | 158 |
MS.gene027369.t1 | AT5G04940 | 32.660 | 297 | 188 | 7 | 219 | 511 | 378 | 666 | 2.17e-41 | 158 |
MS.gene027369.t1 | AT1G17770 | 31.579 | 304 | 187 | 9 | 219 | 511 | 396 | 689 | 8.29e-35 | 139 |
MS.gene027369.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1066 | 1374 | 5.42e-32 | 131 |
MS.gene027369.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027369.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027369.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027369.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 146 | 460 | 1.64e-26 | 113 |
MS.gene027369.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 119 | 433 | 1.72e-26 | 112 |
MS.gene027369.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 130 | 444 | 1.86e-26 | 112 |
MS.gene027369.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 146 | 460 | 2.02e-26 | 112 |
MS.gene027369.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 119 | 433 | 2.19e-26 | 112 |
MS.gene027369.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 103 | 417 | 2.57e-26 | 112 |
MS.gene027369.t1 | AT2G24740 | 30.405 | 296 | 176 | 11 | 225 | 511 | 477 | 751 | 1.08e-25 | 111 |
MS.gene027369.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 438 | 617 | 3.45e-24 | 107 |
MS.gene027369.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 542 | 721 | 3.57e-24 | 107 |
MS.gene027369.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 542 | 721 | 3.57e-24 | 107 |
MS.gene027369.t1 | AT2G23740 | 32.959 | 267 | 121 | 13 | 210 | 443 | 1073 | 1314 | 6.54e-22 | 100 |
MS.gene027369.t1 | AT2G23740 | 32.959 | 267 | 121 | 13 | 210 | 443 | 1073 | 1314 | 6.54e-22 | 100 |
MS.gene027369.t1 | AT3G03750 | 31.933 | 238 | 126 | 7 | 274 | 510 | 143 | 345 | 1.01e-21 | 97.1 |
MS.gene027369.t1 | AT4G30860 | 28.218 | 202 | 103 | 6 | 313 | 514 | 305 | 464 | 7.75e-12 | 68.2 |
Find 100 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTCCAATGTTCGTCTTTGA+TGG | 0.216021 | 7.4:+50326063 | MS.gene027369:CDS |
TGCATAGATGCTGGTTCTTT+TGG | 0.238650 | 7.4:+50329145 | MS.gene027369:CDS |
AACTGACCATACCTCTCTTA+TGG | 0.257716 | 7.4:-50325945 | None:intergenic |
GAAACTTTGTTTCCACATTT+AGG | 0.257839 | 7.4:-50328646 | None:intergenic |
TTGGCTTTAGGTTCATTTAA+TGG | 0.273794 | 7.4:+50327841 | MS.gene027369:intron |
GTTTGCTCACAACTTCAAAA+TGG | 0.284170 | 7.4:+50325898 | MS.gene027369:CDS |
TCTTACCGCCCAACCTTTCT+TGG | 0.287241 | 7.4:-50328800 | None:intergenic |
ACTGACCATACCTCTCTTAT+GGG | 0.344917 | 7.4:-50325944 | None:intergenic |
TGGAAGTAAAGAGGAAAGTT+TGG | 0.346273 | 7.4:+50325861 | MS.gene027369:CDS |
CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7.4:-50329136 | None:intergenic |
CACACAATCAATAGTGTAGA+TGG | 0.372069 | 7.4:+50328940 | MS.gene027369:CDS |
AGAAGACATACCTCCCTATC+AGG | 0.387240 | 7.4:+50329276 | MS.gene027369:CDS |
TGTTCTTGTGCTAATCATAA+TGG | 0.392666 | 7.4:+50328375 | MS.gene027369:CDS |
GCACCAGTTGTCGAGTATAT+TGG | 0.400887 | 7.4:+50328847 | MS.gene027369:CDS |
ATTGATAACGAATACGTTCC+TGG | 0.401461 | 7.4:+50327301 | MS.gene027369:CDS |
TGGAAACAAAGTTTCTCAAC+AGG | 0.404546 | 7.4:+50328654 | MS.gene027369:CDS |
AGTATCTGATAAATAAGCTT+CGG | 0.405640 | 7.4:+50327338 | MS.gene027369:CDS |
TTGCATCCCGCAGCACTAGA+TGG | 0.412772 | 7.4:-50328324 | None:intergenic |
CTCTTATGGGAAATATCATC+TGG | 0.416121 | 7.4:-50325931 | None:intergenic |
GTATCTGATAAATAAGCTTC+GGG | 0.422102 | 7.4:+50327339 | MS.gene027369:CDS |
CTTACCGCCCAACCTTTCTT+GGG | 0.422197 | 7.4:-50328799 | None:intergenic |
GATAAATTGTTTATAGGCAA+TGG | 0.426330 | 7.4:-50329082 | None:intergenic |
CAGGAACTCACATATGACTA+TGG | 0.430156 | 7.4:+50329473 | MS.gene027369:intron |
TGTCCTTGAGAGAAACATCT+AGG | 0.434783 | 7.4:+50326106 | MS.gene027369:CDS |
ATTAGCACAAGAACATCGTT+TGG | 0.435566 | 7.4:-50328367 | None:intergenic |
AGCGAGAATCGACACAAGAT+AGG | 0.441709 | 7.4:+50326820 | MS.gene027369:CDS |
CATGATGAAAAGATTGAACT+TGG | 0.452253 | 7.4:+50325841 | MS.gene027369:CDS |
ACACATTGTACAAAGAGGTT+TGG | 0.458185 | 7.4:-50329202 | None:intergenic |
ATCGTACTCCCAAGAAAGGT+TGG | 0.459933 | 7.4:+50328791 | MS.gene027369:CDS |
TACAAAGAGGAATACCTGAT+AGG | 0.463396 | 7.4:-50329290 | None:intergenic |
TGGAGGATCATCAAAATCAT+TGG | 0.466153 | 7.4:-50328054 | None:intergenic |
TTCTGAAAATGAGGCTATGA+TGG | 0.472623 | 7.4:+50325729 | MS.gene027369:CDS |
ACACCAATATACTCGACAAC+TGG | 0.483092 | 7.4:-50328850 | None:intergenic |
AGTCTTGAACTCACTCTTGT+TGG | 0.483801 | 7.4:-50325754 | None:intergenic |
TCTTCTCAAAGAGTTGAGCT+TGG | 0.484140 | 7.4:-50325995 | None:intergenic |
ACATGGGACTTTATCCCATC+AGG | 0.487648 | 7.4:+50328823 | MS.gene027369:CDS |
ACAAAGAGGAATACCTGATA+GGG | 0.490411 | 7.4:-50329289 | None:intergenic |
GCTTCGGGAACTTGCTAAAG+TGG | 0.493084 | 7.4:+50327354 | MS.gene027369:CDS |
CTTAGCAAGGAGACGAAGAT+TGG | 0.494551 | 7.4:-50326133 | None:intergenic |
TCGTACTCCCAAGAAAGGTT+GGG | 0.500282 | 7.4:+50328792 | MS.gene027369:CDS |
CTAGATGGAACTTCAATGCT+TGG | 0.505910 | 7.4:-50328309 | None:intergenic |
TACACACTCGATAGTGTGTC+TGG | 0.507324 | 7.4:+50329497 | MS.gene027369:CDS |
CGACAACTGGTGCACCTGAT+GGG | 0.509774 | 7.4:-50328837 | None:intergenic |
TACTTCGAAGTAGTGATTCC+AGG | 0.513375 | 7.4:-50327319 | None:intergenic |
GTTTATCGTACTCCCAAGAA+AGG | 0.517387 | 7.4:+50328787 | MS.gene027369:CDS |
TCGACAACTGGTGCACCTGA+TGG | 0.518260 | 7.4:-50328838 | None:intergenic |
CAATCTTCGTCTCCTTGCTA+AGG | 0.519599 | 7.4:+50326134 | MS.gene027369:CDS |
GTTTCAAGATTTATCAACCA+TGG | 0.524532 | 7.4:+50329172 | MS.gene027369:CDS |
GAAGTTCCATCTAGTGCTGC+GGG | 0.529357 | 7.4:+50328318 | MS.gene027369:CDS |
AAACTCTTTCTTCTTCTCCA+AGG | 0.531848 | 7.4:+50327879 | MS.gene027369:CDS |
TGCTAAAGTGGGAACATACA+AGG | 0.533120 | 7.4:+50327366 | MS.gene027369:CDS |
TTTCATACAATAACATTGGC+CGG | 0.533464 | 7.4:+50328406 | MS.gene027369:CDS |
CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7.4:+50329136 | MS.gene027369:CDS |
CTAAGTAGAGACGATGAGCT+AGG | 0.538306 | 7.4:+50328874 | MS.gene027369:CDS |
TTTAGGTTCATTTAATGGAA+GGG | 0.538367 | 7.4:+50327846 | MS.gene027369:intron |
CTTTAGGTTCATTTAATGGA+AGG | 0.538474 | 7.4:+50327845 | MS.gene027369:intron |
GATAGTGTGTCTGGTTCTGA+TGG | 0.539465 | 7.4:+50329506 | MS.gene027369:CDS |
CACTAAGAGTTCTGAAAATG+AGG | 0.540450 | 7.4:+50325720 | MS.gene027369:CDS |
AGAGGTTTGGCTCACATCCA+TGG | 0.542639 | 7.4:-50329189 | None:intergenic |
CTAGACATCGTGGTCGAATG+TGG | 0.546755 | 7.4:+50328604 | MS.gene027369:CDS |
GATTGAACTTGGAAGTAAAG+AGG | 0.553834 | 7.4:+50325852 | MS.gene027369:CDS |
ACAATGTCATTGTGGTTCAA+AGG | 0.554813 | 7.4:+50329544 | MS.gene027369:CDS |
AAGGTTGGGCGGTAAGAACA+TGG | 0.558115 | 7.4:+50328806 | MS.gene027369:CDS |
AAGCCTAGATGTTTCTCTCA+AGG | 0.570477 | 7.4:-50326109 | None:intergenic |
GGGCTTAAGTTACCGACTTG+AGG | 0.574958 | 7.4:+50328675 | MS.gene027369:CDS |
GCGAGAATCGACACAAGATA+GGG | 0.577011 | 7.4:+50326821 | MS.gene027369:CDS |
TGTCATTCAAGTTCAAGAAG+TGG | 0.578513 | 7.4:+50326027 | MS.gene027369:CDS |
AGTCCATCAAAGACGAACAT+TGG | 0.579758 | 7.4:-50326066 | None:intergenic |
TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7.4:-50329207 | None:intergenic |
GAAGATATAATCATTTCCGT+TGG | 0.584617 | 7.4:-50328902 | None:intergenic |
TGTGGACCGCAATGTGGATG+CGG | 0.588020 | 7.4:+50328622 | MS.gene027369:CDS |
TGCTGCGGGATGCAATTGCA+AGG | 0.591722 | 7.4:+50328332 | MS.gene027369:CDS |
GTATGCAAGGACATTAGCAA+TGG | 0.598177 | 7.4:+50328005 | MS.gene027369:CDS |
TTACCTGTGGGTGCAACTGG+AGG | 0.602916 | 7.4:-50328071 | None:intergenic |
CTTCGGGAACTTGCTAAAGT+GGG | 0.602929 | 7.4:+50327355 | MS.gene027369:CDS |
TATTTCCCATAAGAGAGGTA+TGG | 0.605924 | 7.4:+50325939 | MS.gene027369:CDS |
GATCCTCCAGTTGCACCCAC+AGG | 0.606455 | 7.4:+50328068 | MS.gene027369:CDS |
AAGTTTGGTATCAACAACAA+AGG | 0.612619 | 7.4:+50325876 | MS.gene027369:CDS |
TGTGGATGCGGTCCTAAATG+TGG | 0.617446 | 7.4:+50328634 | MS.gene027369:CDS |
AGCACTACACGAGCTAGTCT+AGG | 0.619841 | 7.4:-50329244 | None:intergenic |
AATGTTATTGTATGAAAACT+CGG | 0.621218 | 7.4:-50328400 | None:intergenic |
CATTCGACCACGATGTCTAG+AGG | 0.624366 | 7.4:-50328601 | None:intergenic |
TATAATATTTACAACAGCAG+CGG | 0.628158 | 7.4:+50325799 | MS.gene027369:CDS |
CAATAGTGTAGATGGAAGAG+AGG | 0.628379 | 7.4:+50328948 | MS.gene027369:CDS |
ATTGTAAAATGACCTCAAGT+CGG | 0.632516 | 7.4:-50328687 | None:intergenic |
GATGATATTTCCCATAAGAG+AGG | 0.634933 | 7.4:+50325934 | MS.gene027369:CDS |
TGAAGTTCCATCTAGTGCTG+CGG | 0.634941 | 7.4:+50328317 | MS.gene027369:CDS |
TTGTATCACACACCTTAGCA+AGG | 0.638217 | 7.4:-50326146 | None:intergenic |
AAACAGCTACAATGTCATTG+TGG | 0.648614 | 7.4:+50329536 | MS.gene027369:CDS |
AAGAGGAATACCTGATAGGG+AGG | 0.649275 | 7.4:-50329286 | None:intergenic |
CTTGAACTTGAATGACAGCG+AGG | 0.651390 | 7.4:-50326021 | None:intergenic |
GCTGCGGGATGCAATTGCAA+GGG | 0.655088 | 7.4:+50328333 | MS.gene027369:CDS |
AGGTTGGGCGGTAAGAACAT+GGG | 0.665196 | 7.4:+50328807 | MS.gene027369:CDS |
TACTCCCAAGAAAGGTTGGG+CGG | 0.669811 | 7.4:+50328795 | MS.gene027369:CDS |
GTCGAATGTGGACCGCAATG+TGG | 0.680163 | 7.4:+50328616 | MS.gene027369:CDS |
GGAAACAAAGTTTCTCAACA+GGG | 0.682009 | 7.4:+50328655 | MS.gene027369:CDS |
TTAGGACCGCATCCACATTG+CGG | 0.698881 | 7.4:-50328628 | None:intergenic |
GATGAGCTAGGAAGTGCCAA+CGG | 0.706121 | 7.4:+50328886 | MS.gene027369:CDS |
GATTGAGCCTCTAGACATCG+TGG | 0.722557 | 7.4:+50328594 | MS.gene027369:CDS |
GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7.4:-50329234 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATATGTATGAAATTT+AGG | + | chr7.4:50329002-50329021 | MS.gene027369:intron | 10.0% |
!! | GTAAAAATTTAATAAACAAT+TGG | + | chr7.4:50329433-50329452 | MS.gene027369:intron | 10.0% |
!! | TAAAATATGTATGAAATTTA+GGG | + | chr7.4:50329003-50329022 | MS.gene027369:intron | 10.0% |
!!! | GTTTTTTCATTTTTAAAAAA+GGG | - | chr7.4:50328123-50328142 | None:intergenic | 10.0% |
!!! | TAATATCTTATTAGAATTTT+GGG | + | chr7.4:50327650-50327669 | MS.gene027369:intron | 10.0% |
!!! | TAATTGATTTTATTAGTTTT+TGG | + | chr7.4:50326742-50326761 | MS.gene027369:intron | 10.0% |
!!! | TGTTTTTTCATTTTTAAAAA+AGG | - | chr7.4:50328124-50328143 | None:intergenic | 10.0% |
!!! | TTAATATCTTATTAGAATTT+TGG | + | chr7.4:50327649-50327668 | MS.gene027369:intron | 10.0% |
!! | AAACAATTTATCTGAAAAAA+GGG | + | chr7.4:50329093-50329112 | MS.gene027369:CDS | 15.0% |
!! | ATTGTATTTATACAATTATG+AGG | + | chr7.4:50326437-50326456 | MS.gene027369:intron | 15.0% |
!! | GAAAAAAAAAAAAGGAAAAA+GGG | - | chr7.4:50328167-50328186 | None:intergenic | 15.0% |
!! | GAAAATACAAAGAAAATTAT+TGG | - | chr7.4:50327043-50327062 | None:intergenic | 15.0% |
!! | GTAAAACAAAAAATATTAGA+TGG | + | chr7.4:50328090-50328109 | MS.gene027369:intron | 15.0% |
!! | TAAACAATTTATCTGAAAAA+AGG | + | chr7.4:50329092-50329111 | MS.gene027369:CDS | 15.0% |
!! | TTATTTAACATTAAGTCAAA+AGG | - | chr7.4:50326885-50326904 | None:intergenic | 15.0% |
!!! | ATTTAAAATCATGATATCAA+GGG | - | chr7.4:50326983-50327002 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTAAACATGA+TGG | + | chr7.4:50329366-50329385 | MS.gene027369:intron | 15.0% |
!!! | TCATGATGTTTTAAAATTTT+AGG | + | chr7.4:50328255-50328274 | MS.gene027369:intron | 15.0% |
!!! | TTATTAAATTTTTACCATGA+AGG | - | chr7.4:50329428-50329447 | None:intergenic | 15.0% |
!!! | TTTTCAGATAAATTGTTTAT+AGG | - | chr7.4:50329091-50329110 | None:intergenic | 15.0% |
!! | AATGTTATTGTATGAAAACT+CGG | - | chr7.4:50328403-50328422 | None:intergenic | 20.0% |
!! | ACATAAATAATATGCAACAT+TGG | - | chr7.4:50326214-50326233 | None:intergenic | 20.0% |
!! | CGAAAAAAAAAAAAGGAAAA+AGG | - | chr7.4:50328168-50328187 | None:intergenic | 20.0% |
!! | TAAAGTTACTCCTAATAAAT+TGG | - | chr7.4:50327146-50327165 | None:intergenic | 20.0% |
!! | TCAACTAAGAAATTAACTAT+AGG | - | chr7.4:50326700-50326719 | None:intergenic | 20.0% |
!! | TCGTATTCTAATATTCAATT+TGG | + | chr7.4:50327822-50327841 | MS.gene027369:intron | 20.0% |
!! | TGTAGTAAGATGTATAAATA+TGG | + | chr7.4:50326377-50326396 | MS.gene027369:intron | 20.0% |
!! | TTACATATTACAAACATCAA+TGG | - | chr7.4:50328738-50328757 | None:intergenic | 20.0% |
!! | TTCTAATAAGATATTAAAGC+CGG | - | chr7.4:50327646-50327665 | None:intergenic | 20.0% |
!!! | AAAATTGAACAAAAGTACAA+AGG | - | chr7.4:50327499-50327518 | None:intergenic | 20.0% |
!!! | AATATTTTTTGTTTTACCTG+TGG | - | chr7.4:50328087-50328106 | None:intergenic | 20.0% |
!!! | ACATGTTTTATTTAAGGTTT+AGG | - | chr7.4:50326957-50326976 | None:intergenic | 20.0% |
!!! | AGACTATTTTCATCAATATA+TGG | - | chr7.4:50327211-50327230 | None:intergenic | 20.0% |
!!! | ATATTTTTTGTTTTACCTGT+GGG | - | chr7.4:50328086-50328105 | None:intergenic | 20.0% |
!!! | ATTTGTTTTTTTTCTTGTCA+GGG | + | chr7.4:50328446-50328465 | MS.gene027369:intron | 20.0% |
!!! | CATGTTTTATTTAAGGTTTA+GGG | - | chr7.4:50326956-50326975 | None:intergenic | 20.0% |
!!! | GAATATTGTTTCTTTTAGTT+TGG | + | chr7.4:50327983-50328002 | MS.gene027369:intron | 20.0% |
!!! | GATTTAAAATCATGATATCA+AGG | - | chr7.4:50326984-50327003 | None:intergenic | 20.0% |
!!! | GATTTTATTAGTTTTTGGTT+CGG | + | chr7.4:50326747-50326766 | MS.gene027369:intron | 20.0% |
! | AAGATGTATTAATATGGTTG+TGG | + | chr7.4:50327010-50327029 | MS.gene027369:intron | 25.0% |
! | AATATGTATGAAATTTAGGG+CGG | + | chr7.4:50329006-50329025 | MS.gene027369:intron | 25.0% |
! | AGTATCTGATAAATAAGCTT+CGG | + | chr7.4:50327338-50327357 | MS.gene027369:CDS | 25.0% |
! | ATCCAAAAGTAAAACAATAC+CGG | - | chr7.4:50328428-50328447 | None:intergenic | 25.0% |
! | ATTAGAATACGACATATAAG+TGG | - | chr7.4:50327814-50327833 | None:intergenic | 25.0% |
! | GATAAATTGTTTATAGGCAA+TGG | - | chr7.4:50329085-50329104 | None:intergenic | 25.0% |
! | GCTGTTAAGATGTATTAATA+TGG | + | chr7.4:50327004-50327023 | MS.gene027369:intron | 25.0% |
! | TATAATATTTACAACAGCAG+CGG | + | chr7.4:50325799-50325818 | MS.gene027369:CDS | 25.0% |
!! | ATTAACTTTCATTTTGTTGC+AGG | + | chr7.4:50327264-50327283 | MS.gene027369:intron | 25.0% |
!! | CGTATTAGTTTCTTTCTTTA+TGG | + | chr7.4:50326643-50326662 | MS.gene027369:intron | 25.0% |
!! | GAGTTTTCATACAATAACAT+TGG | + | chr7.4:50328402-50328421 | MS.gene027369:CDS | 25.0% |
!! | GGTATATTTTCTAACTTAAC+AGG | + | chr7.4:50329454-50329473 | MS.gene027369:intron | 25.0% |
!! | TTCAATCTTTTCATCATGTT+GGG | - | chr7.4:50325839-50325858 | None:intergenic | 25.0% |
!! | TTTAGGTTCATTTAATGGAA+GGG | + | chr7.4:50327846-50327865 | MS.gene027369:intron | 25.0% |
!! | TTTTATGATAACTTCCTTCA+TGG | + | chr7.4:50329411-50329430 | MS.gene027369:intron | 25.0% |
!!! | AAATCTCAAGTAATTTGCTT+TGG | - | chr7.4:50326552-50326571 | None:intergenic | 25.0% |
!!! | ATCTTATTAGAATTTTGGGT+TGG | + | chr7.4:50327654-50327673 | MS.gene027369:intron | 25.0% |
!!! | CTAATATTCAATTTGGCTTT+AGG | + | chr7.4:50327829-50327848 | MS.gene027369:intron | 25.0% |
!!! | GATTTGTTTTTTTTCTTGTC+AGG | + | chr7.4:50328445-50328464 | MS.gene027369:intron | 25.0% |
!!! | GGGAATACATGTTTTATTTA+AGG | - | chr7.4:50326963-50326982 | None:intergenic | 25.0% |
!!! | GGTTTGTTATTGCATATATA+TGG | + | chr7.4:50329387-50329406 | MS.gene027369:intron | 25.0% |
!!! | TCTTTGAAATTTTTCAGAGA+CGG | + | chr7.4:50329047-50329066 | MS.gene027369:intron | 25.0% |
AAGGAAAAAGGGACATATAT+TGG | - | chr7.4:50328156-50328175 | None:intergenic | 30.0% | |
AAGTTTGGTATCAACAACAA+AGG | + | chr7.4:50325876-50325895 | MS.gene027369:CDS | 30.0% | |
AGGTATTCCTCTTTGTAATA+AGG | + | chr7.4:50329296-50329315 | MS.gene027369:intron | 30.0% | |
ATTGTAAAATGACCTCAAGT+CGG | - | chr7.4:50328690-50328709 | None:intergenic | 30.0% | |
CATGATGAAAAGATTGAACT+TGG | + | chr7.4:50325841-50325860 | MS.gene027369:CDS | 30.0% | |
CATGCAGCGAAAAAAAAAAA+AGG | - | chr7.4:50328175-50328194 | None:intergenic | 30.0% | |
CTAAGATCCTTATTACAAAG+AGG | - | chr7.4:50329306-50329325 | None:intergenic | 30.0% | |
CTCTTTGTAATAAGGATCTT+AGG | + | chr7.4:50329304-50329323 | MS.gene027369:intron | 30.0% | |
CTTACAAAATCAGCTTGTAA+AGG | + | chr7.4:50327689-50327708 | MS.gene027369:intron | 30.0% | |
GAAGATATAATCATTTCCGT+TGG | - | chr7.4:50328905-50328924 | None:intergenic | 30.0% | |
GATTTCCAAACATCAATGAA+GGG | - | chr7.4:50326593-50326612 | None:intergenic | 30.0% | |
GTATCTGATAAATAAGCTTC+GGG | + | chr7.4:50327339-50327358 | MS.gene027369:CDS | 30.0% | |
GTTTCAAGATTTATCAACCA+TGG | + | chr7.4:50329172-50329191 | MS.gene027369:CDS | 30.0% | |
TAGAAAAAGTTTAGACGAGT+TGG | + | chr7.4:50326290-50326309 | MS.gene027369:intron | 30.0% | |
TATATCCCTTCATTGATGTT+TGG | + | chr7.4:50326585-50326604 | MS.gene027369:intron | 30.0% | |
TGATTTCCAAACATCAATGA+AGG | - | chr7.4:50326594-50326613 | None:intergenic | 30.0% | |
TGTTCTTGTGCTAATCATAA+TGG | + | chr7.4:50328375-50328394 | MS.gene027369:CDS | 30.0% | |
TTTCATACAATAACATTGGC+CGG | + | chr7.4:50328406-50328425 | MS.gene027369:CDS | 30.0% | |
TTTCTTGCTGCCAATTTATT+AGG | + | chr7.4:50327133-50327152 | MS.gene027369:intron | 30.0% | |
! | AAAATATTGCGACACTTTTG+AGG | + | chr7.4:50326845-50326864 | MS.gene027369:CDS | 30.0% |
! | AAATATTGCGACACTTTTGA+GGG | + | chr7.4:50326846-50326865 | MS.gene027369:CDS | 30.0% |
! | AAGAGATAAAGCCTTATCAT+GGG | - | chr7.4:50327738-50327757 | None:intergenic | 30.0% |
! | CTTTAGGTTCATTTAATGGA+AGG | + | chr7.4:50327845-50327864 | MS.gene027369:intron | 30.0% |
! | GAAACTTTGTTTCCACATTT+AGG | - | chr7.4:50328649-50328668 | None:intergenic | 30.0% |
! | GTTCAATCTTTTCATCATGT+TGG | - | chr7.4:50325840-50325859 | None:intergenic | 30.0% |
! | TGATCTTCATTTTCCTACTA+TGG | + | chr7.4:50327073-50327092 | MS.gene027369:intron | 30.0% |
! | TGCATGATGTCTTATTGAAT+GGG | + | chr7.4:50326526-50326545 | MS.gene027369:intron | 30.0% |
! | TTGCATGATGTCTTATTGAA+TGG | + | chr7.4:50326525-50326544 | MS.gene027369:intron | 30.0% |
!! | CTTTACAAGCTGATTTTGTA+AGG | - | chr7.4:50327691-50327710 | None:intergenic | 30.0% |
!! | GATTTGTTGATAACATACCT+TGG | - | chr7.4:50327899-50327918 | None:intergenic | 30.0% |
!! | TTGGCTTTAGGTTCATTTAA+TGG | + | chr7.4:50327841-50327860 | MS.gene027369:intron | 30.0% |
!!! | CTTTGATGGACTTGATTTTA+GGG | + | chr7.4:50326077-50326096 | MS.gene027369:CDS | 30.0% |
!!! | TCTTTGATGGACTTGATTTT+AGG | + | chr7.4:50326076-50326095 | MS.gene027369:CDS | 30.0% |
!!! | TTCTTTTAGTTTGGTATGCA+AGG | + | chr7.4:50327992-50328011 | MS.gene027369:intron | 30.0% |
!!! | TTTGATGGACTTGATTTTAG+GGG | + | chr7.4:50326078-50326097 | MS.gene027369:CDS | 30.0% |
AAACAGCTACAATGTCATTG+TGG | + | chr7.4:50329536-50329555 | MS.gene027369:CDS | 35.0% | |
AAACTACCTTTCTCTTACAC+AGG | + | chr7.4:50328765-50328784 | MS.gene027369:intron | 35.0% | |
AAACTCTTTCTTCTTCTCCA+AGG | + | chr7.4:50327879-50327898 | MS.gene027369:CDS | 35.0% | |
AAACTTCAAATGTCCAGTCA+TGG | - | chr7.4:50327573-50327592 | None:intergenic | 35.0% | |
ACAAAGAGGAATACCTGATA+GGG | - | chr7.4:50329292-50329311 | None:intergenic | 35.0% | |
ACAATGTCATTGTGGTTCAA+AGG | + | chr7.4:50329544-50329563 | MS.gene027369:CDS | 35.0% | |
ACACATTGTACAAAGAGGTT+TGG | - | chr7.4:50329205-50329224 | None:intergenic | 35.0% | |
AGAATGTGTGACAATTTCCA+TGG | - | chr7.4:50326333-50326352 | None:intergenic | 35.0% | |
ATTAGCACAAGAACATCGTT+TGG | - | chr7.4:50328370-50328389 | None:intergenic | 35.0% | |
CACACAATCAATAGTGTAGA+TGG | + | chr7.4:50328940-50328959 | MS.gene027369:CDS | 35.0% | |
CTCATCAAACATACCATAGT+AGG | - | chr7.4:50327089-50327108 | None:intergenic | 35.0% | |
CTCTTATGGGAAATATCATC+TGG | - | chr7.4:50325934-50325953 | None:intergenic | 35.0% | |
GATAAACCTGTGTAAGAGAA+AGG | - | chr7.4:50328774-50328793 | None:intergenic | 35.0% | |
GATGATATTTCCCATAAGAG+AGG | + | chr7.4:50325934-50325953 | MS.gene027369:CDS | 35.0% | |
GATTGAACTTGGAAGTAAAG+AGG | + | chr7.4:50325852-50325871 | MS.gene027369:CDS | 35.0% | |
GCAGCAAGAAATTGACTAAT+TGG | - | chr7.4:50327124-50327143 | None:intergenic | 35.0% | |
GGAAACAAAGTTTCTCAACA+GGG | + | chr7.4:50328655-50328674 | MS.gene027369:CDS | 35.0% | |
GTTTGCTCACAACTTCAAAA+TGG | + | chr7.4:50325898-50325917 | MS.gene027369:CDS | 35.0% | |
TACAAAGAGGAATACCTGAT+AGG | - | chr7.4:50329293-50329312 | None:intergenic | 35.0% | |
TACTACCAGATTTCCACTAT+CGG | - | chr7.4:50327599-50327618 | None:intergenic | 35.0% | |
TATTTCCCATAAGAGAGGTA+TGG | + | chr7.4:50325939-50325958 | MS.gene027369:CDS | 35.0% | |
TCACCTATAAACCCATGATA+AGG | + | chr7.4:50327724-50327743 | MS.gene027369:intron | 35.0% | |
TGAAAAAAGGGACGAGTTAA+TGG | + | chr7.4:50329105-50329124 | MS.gene027369:CDS | 35.0% | |
TGAGAACACATTGTACAAAG+AGG | - | chr7.4:50329210-50329229 | None:intergenic | 35.0% | |
TGGAAACAAAGTTTCTCAAC+AGG | + | chr7.4:50328654-50328673 | MS.gene027369:CDS | 35.0% | |
TGGAAGTAAAGAGGAAAGTT+TGG | + | chr7.4:50325861-50325880 | MS.gene027369:CDS | 35.0% | |
TGGAGGATCATCAAAATCAT+TGG | - | chr7.4:50328057-50328076 | None:intergenic | 35.0% | |
TTATCATGGGTTTATAGGTG+AGG | - | chr7.4:50327725-50327744 | None:intergenic | 35.0% | |
TTGTTGCAGGTAGAGAAAAA+TGG | + | chr7.4:50327277-50327296 | MS.gene027369:intron | 35.0% | |
! | AAGCCTTATCATGGGTTTAT+AGG | - | chr7.4:50327730-50327749 | None:intergenic | 35.0% |
! | AGGTTTAGGGTTTAAGCATT+AGG | - | chr7.4:50326943-50326962 | None:intergenic | 35.0% |
! | CTCATTTTCAGAACTCTTAG+TGG | - | chr7.4:50325722-50325741 | None:intergenic | 35.0% |
! | GAAGAGATAAAGCCTTATCA+TGG | - | chr7.4:50327739-50327758 | None:intergenic | 35.0% |
! | GGTTTAGGGTTTAAGCATTA+GGG | - | chr7.4:50326942-50326961 | None:intergenic | 35.0% |
! | TGTCATTCAAGTTCAAGAAG+TGG | + | chr7.4:50326027-50326046 | MS.gene027369:CDS | 35.0% |
! | TTCTGAAAATGAGGCTATGA+TGG | + | chr7.4:50325729-50325748 | MS.gene027369:CDS | 35.0% |
!! | ATTGATAACGAATACGTTCC+TGG | + | chr7.4:50327301-50327320 | MS.gene027369:CDS | 35.0% |
!! | CAAGCTGATTTTGTAAGGTT+TGG | - | chr7.4:50327686-50327705 | None:intergenic | 35.0% |
!! | CACTAAGAGTTCTGAAAATG+AGG | + | chr7.4:50325720-50325739 | MS.gene027369:CDS | 35.0% |
!! | GAAATTTTTCAGAGACGGTT+GGG | + | chr7.4:50329052-50329071 | MS.gene027369:intron | 35.0% |
!! | TGAAATTTTTCAGAGACGGT+TGG | + | chr7.4:50329051-50329070 | MS.gene027369:intron | 35.0% |
!! | TTTTCGCTGCATGCTTTATT+TGG | + | chr7.4:50328182-50328201 | MS.gene027369:intron | 35.0% |
AAAATCAGCTTGTAAAGGCG+AGG | + | chr7.4:50327694-50327713 | MS.gene027369:intron | 40.0% | |
AACTGACCATACCTCTCTTA+TGG | - | chr7.4:50325948-50325967 | None:intergenic | 40.0% | |
AAGCCTAGATGTTTCTCTCA+AGG | - | chr7.4:50326112-50326131 | None:intergenic | 40.0% | |
ACACCAATATACTCGACAAC+TGG | - | chr7.4:50328853-50328872 | None:intergenic | 40.0% | |
ACTACCAGATTTCCACTATC+GGG | - | chr7.4:50327598-50327617 | None:intergenic | 40.0% | |
ACTGACCATACCTCTCTTAT+GGG | - | chr7.4:50325947-50325966 | None:intergenic | 40.0% | |
AGTCCATCAAAGACGAACAT+TGG | - | chr7.4:50326069-50326088 | None:intergenic | 40.0% | |
AGTCTTGAACTCACTCTTGT+TGG | - | chr7.4:50325757-50325776 | None:intergenic | 40.0% | |
AGTGAGCCGATAGTGAATAT+TGG | + | chr7.4:50327619-50327638 | MS.gene027369:intron | 40.0% | |
CAATAGTGTAGATGGAAGAG+AGG | + | chr7.4:50328948-50328967 | MS.gene027369:CDS | 40.0% | |
CAGGAACTCACATATGACTA+TGG | + | chr7.4:50329473-50329492 | MS.gene027369:intron | 40.0% | |
CCAGCATCTATGCAATATTC+AGG | - | chr7.4:50329139-50329158 | None:intergenic | 40.0% | |
CCTGAATATTGCATAGATGC+TGG | + | chr7.4:50329136-50329155 | MS.gene027369:CDS | 40.0% | |
CTAGATGGAACTTCAATGCT+TGG | - | chr7.4:50328312-50328331 | None:intergenic | 40.0% | |
GTAACAACATCATTTGCAGC+AGG | + | chr7.4:50326783-50326802 | MS.gene027369:intron | 40.0% | |
GTATGCAAGGACATTAGCAA+TGG | + | chr7.4:50328005-50328024 | MS.gene027369:CDS | 40.0% | |
GTTTATCGTACTCCCAAGAA+AGG | + | chr7.4:50328787-50328806 | MS.gene027369:CDS | 40.0% | |
TACTTCGAAGTAGTGATTCC+AGG | - | chr7.4:50327322-50327341 | None:intergenic | 40.0% | |
TCTTCTCAAAGAGTTGAGCT+TGG | - | chr7.4:50325998-50326017 | None:intergenic | 40.0% | |
TGCTAAAGTGGGAACATACA+AGG | + | chr7.4:50327366-50327385 | MS.gene027369:CDS | 40.0% | |
TGTCCTTGAGAGAAACATCT+AGG | + | chr7.4:50326106-50326125 | MS.gene027369:CDS | 40.0% | |
TTGTATCACACACCTTAGCA+AGG | - | chr7.4:50326149-50326168 | None:intergenic | 40.0% | |
! | CGAGTTGGATTTCAGACTTT+CGG | + | chr7.4:50326305-50326324 | MS.gene027369:intron | 40.0% |
! | TTTGAAGTTTGACCCGATAG+TGG | + | chr7.4:50327583-50327602 | MS.gene027369:intron | 40.0% |
!! | GGCCGGTATTGTTTTACTTT+TGG | + | chr7.4:50328423-50328442 | MS.gene027369:intron | 40.0% |
!!! | TGCATAGATGCTGGTTCTTT+TGG | + | chr7.4:50329145-50329164 | MS.gene027369:CDS | 40.0% |
AAGAGGAATACCTGATAGGG+AGG | - | chr7.4:50329289-50329308 | None:intergenic | 45.0% | |
ACATGGGACTTTATCCCATC+AGG | + | chr7.4:50328823-50328842 | MS.gene027369:CDS | 45.0% | |
AGAAGACATACCTCCCTATC+AGG | + | chr7.4:50329276-50329295 | MS.gene027369:CDS | 45.0% | |
AGCGAGAATCGACACAAGAT+AGG | + | chr7.4:50326820-50326839 | MS.gene027369:CDS | 45.0% | |
ATCGTACTCCCAAGAAAGGT+TGG | + | chr7.4:50328791-50328810 | MS.gene027369:CDS | 45.0% | |
ATTTCAGACTTTCGGAGCCA+TGG | + | chr7.4:50326313-50326332 | MS.gene027369:intron | 45.0% | |
CAATCTTCGTCTCCTTGCTA+AGG | + | chr7.4:50326134-50326153 | MS.gene027369:CDS | 45.0% | |
CGAGTTGTATCATGCAGCTA+GGG | - | chr7.4:50327186-50327205 | None:intergenic | 45.0% | |
CGTCCAATGTTCGTCTTTGA+TGG | + | chr7.4:50326063-50326082 | MS.gene027369:CDS | 45.0% | |
CTAAGTAGAGACGATGAGCT+AGG | + | chr7.4:50328874-50328893 | MS.gene027369:CDS | 45.0% | |
CTTAGCAAGGAGACGAAGAT+TGG | - | chr7.4:50326136-50326155 | None:intergenic | 45.0% | |
CTTGAACTTGAATGACAGCG+AGG | - | chr7.4:50326024-50326043 | None:intergenic | 45.0% | |
GCACCAGTTGTCGAGTATAT+TGG | + | chr7.4:50328847-50328866 | MS.gene027369:CDS | 45.0% | |
GCCGATAGTGAATATTGGAC+CGG | + | chr7.4:50327624-50327643 | MS.gene027369:intron | 45.0% | |
GCCGGTCCAATATTCACTAT+CGG | - | chr7.4:50327628-50327647 | None:intergenic | 45.0% | |
GCGAGAATCGACACAAGATA+GGG | + | chr7.4:50326821-50326840 | MS.gene027369:CDS | 45.0% | |
GGGTTTAAGCATTAGGGCTA+AGG | - | chr7.4:50326936-50326955 | None:intergenic | 45.0% | |
TACACACTCGATAGTGTGTC+TGG | + | chr7.4:50329497-50329516 | MS.gene027369:CDS | 45.0% | |
TCGTACTCCCAAGAAAGGTT+GGG | + | chr7.4:50328792-50328811 | MS.gene027369:CDS | 45.0% | |
TGAAGTTCCATCTAGTGCTG+CGG | + | chr7.4:50328317-50328336 | MS.gene027369:CDS | 45.0% | |
!! | CTTCGGGAACTTGCTAAAGT+GGG | + | chr7.4:50327355-50327374 | MS.gene027369:CDS | 45.0% |
!! | GATAGTGTGTCTGGTTCTGA+TGG | + | chr7.4:50329506-50329525 | MS.gene027369:CDS | 45.0% |
!! | TTGACCCGATAGTGGAAATC+TGG | + | chr7.4:50327591-50327610 | MS.gene027369:intron | 45.0% |
AAGGTTGGGCGGTAAGAACA+TGG | + | chr7.4:50328806-50328825 | MS.gene027369:CDS | 50.0% | |
AGGTTGGGCGGTAAGAACAT+GGG | + | chr7.4:50328807-50328826 | MS.gene027369:CDS | 50.0% | |
CATTCGACCACGATGTCTAG+AGG | - | chr7.4:50328604-50328623 | None:intergenic | 50.0% | |
CTAGACATCGTGGTCGAATG+TGG | + | chr7.4:50328604-50328623 | MS.gene027369:CDS | 50.0% | |
CTTACCGCCCAACCTTTCTT+GGG | - | chr7.4:50328802-50328821 | None:intergenic | 50.0% | |
GAAGTTCCATCTAGTGCTGC+GGG | + | chr7.4:50328318-50328337 | MS.gene027369:CDS | 50.0% | |
GATTGAGCCTCTAGACATCG+TGG | + | chr7.4:50328594-50328613 | MS.gene027369:CDS | 50.0% | |
GCGAGTTGTATCATGCAGCT+AGG | - | chr7.4:50327187-50327206 | None:intergenic | 50.0% | |
TACTCCCAAGAAAGGTTGGG+CGG | + | chr7.4:50328795-50328814 | MS.gene027369:CDS | 50.0% | |
TCTTACCGCCCAACCTTTCT+TGG | - | chr7.4:50328803-50328822 | None:intergenic | 50.0% | |
TGTGGATGCGGTCCTAAATG+TGG | + | chr7.4:50328634-50328653 | MS.gene027369:CDS | 50.0% | |
TTAGGACCGCATCCACATTG+CGG | - | chr7.4:50328631-50328650 | None:intergenic | 50.0% | |
! | AGAGGTTTGGCTCACATCCA+TGG | - | chr7.4:50329192-50329211 | None:intergenic | 50.0% |
! | AGCACTACACGAGCTAGTCT+AGG | - | chr7.4:50329247-50329266 | None:intergenic | 50.0% |
! | GAGCTAGTCTAGGATCTCTG+TGG | - | chr7.4:50329237-50329256 | None:intergenic | 50.0% |
! | GTTTTACCTGTGGGTGCAAC+TGG | - | chr7.4:50328077-50328096 | None:intergenic | 50.0% |
!! | GATGAGCTAGGAAGTGCCAA+CGG | + | chr7.4:50328886-50328905 | MS.gene027369:CDS | 50.0% |
!! | GCTTCGGGAACTTGCTAAAG+TGG | + | chr7.4:50327354-50327373 | MS.gene027369:CDS | 50.0% |
!! | GGGCTTAAGTTACCGACTTG+AGG | + | chr7.4:50328675-50328694 | MS.gene027369:CDS | 50.0% |
CGACAACTGGTGCACCTGAT+GGG | - | chr7.4:50328840-50328859 | None:intergenic | 55.0% | |
GCTGCGGGATGCAATTGCAA+GGG | + | chr7.4:50328333-50328352 | MS.gene027369:CDS | 55.0% | |
GTCCAGTCATGGACGTGAGA+GGG | - | chr7.4:50327562-50327581 | None:intergenic | 55.0% | |
GTCGAATGTGGACCGCAATG+TGG | + | chr7.4:50328616-50328635 | MS.gene027369:CDS | 55.0% | |
TCGACAACTGGTGCACCTGA+TGG | - | chr7.4:50328841-50328860 | None:intergenic | 55.0% | |
TGCTGCGGGATGCAATTGCA+AGG | + | chr7.4:50328332-50328351 | MS.gene027369:CDS | 55.0% | |
TGTCCAGTCATGGACGTGAG+AGG | - | chr7.4:50327563-50327582 | None:intergenic | 55.0% | |
TGTGGACCGCAATGTGGATG+CGG | + | chr7.4:50328622-50328641 | MS.gene027369:CDS | 55.0% | |
TTACCTGTGGGTGCAACTGG+AGG | - | chr7.4:50328074-50328093 | None:intergenic | 55.0% | |
TTGCATCCCGCAGCACTAGA+TGG | - | chr7.4:50328327-50328346 | None:intergenic | 55.0% | |
CACCCTCTCACGTCCATGAC+TGG | + | chr7.4:50327557-50327576 | MS.gene027369:intron | 60.0% | |
GATCCTCCAGTTGCACCCAC+AGG | + | chr7.4:50328068-50328087 | MS.gene027369:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 50325712 | 50329589 | 50325712 | ID=MS.gene027369 |
chr7.4 | mRNA | 50325712 | 50329589 | 50325712 | ID=MS.gene027369.t1;Parent=MS.gene027369 |
chr7.4 | exon | 50325712 | 50326155 | 50325712 | ID=MS.gene027369.t1.exon1;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50325712 | 50326155 | 50325712 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50326802 | 50326876 | 50326802 | ID=MS.gene027369.t1.exon2;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50326802 | 50326876 | 50326802 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50327286 | 50327387 | 50327286 | ID=MS.gene027369.t1.exon3;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50327286 | 50327387 | 50327286 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50327851 | 50327900 | 50327851 | ID=MS.gene027369.t1.exon4;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50327851 | 50327900 | 50327851 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50328001 | 50328089 | 50328001 | ID=MS.gene027369.t1.exon5;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50328001 | 50328089 | 50328001 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50328277 | 50328427 | 50328277 | ID=MS.gene027369.t1.exon6;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50328277 | 50328427 | 50328277 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50328591 | 50328696 | 50328591 | ID=MS.gene027369.t1.exon7;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50328591 | 50328696 | 50328591 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50328787 | 50328969 | 50328787 | ID=MS.gene027369.t1.exon8;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50328787 | 50328969 | 50328787 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50329064 | 50329297 | 50329064 | ID=MS.gene027369.t1.exon9;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50329064 | 50329297 | 50329064 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
chr7.4 | exon | 50329476 | 50329589 | 50329476 | ID=MS.gene027369.t1.exon10;Parent=MS.gene027369.t1 |
chr7.4 | CDS | 50329476 | 50329589 | 50329476 | ID=cds.MS.gene027369.t1;Parent=MS.gene027369.t1 |
Gene Sequence |
Protein sequence |