Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027370.t1 | AES79015.2 | 84.3 | 561 | 37 | 4 | 1 | 515 | 1 | 556 | 7.90E-239 | 836.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027370.t1 | Q8GZB6 | 54.0 | 337 | 148 | 5 | 184 | 515 | 290 | 624 | 1.7e-101 | 371.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027370.t1 | G7KY38 | 84.3 | 561 | 37 | 4 | 1 | 515 | 1 | 556 | 5.7e-239 | 836.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene027370.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027370.t1 | MTR_7g052480 | 86.096 | 561 | 27 | 4 | 1 | 515 | 1 | 556 | 0.0 | 962 |
MS.gene027370.t1 | MTR_7g084090 | 55.357 | 336 | 146 | 3 | 184 | 515 | 422 | 757 | 6.91e-124 | 380 |
MS.gene027370.t1 | MTR_6g061270 | 55.060 | 336 | 147 | 3 | 184 | 515 | 359 | 694 | 9.00e-122 | 373 |
MS.gene027370.t1 | MTR_6g061200 | 51.190 | 336 | 131 | 4 | 184 | 515 | 359 | 665 | 5.62e-107 | 333 |
MS.gene027370.t1 | MTR_5g013420 | 46.207 | 290 | 142 | 8 | 229 | 515 | 811 | 1089 | 2.41e-69 | 241 |
MS.gene027370.t1 | MTR_5g013420 | 45.862 | 290 | 143 | 8 | 229 | 515 | 811 | 1089 | 2.56e-68 | 238 |
MS.gene027370.t1 | MTR_4g010830 | 43.537 | 294 | 152 | 9 | 225 | 515 | 698 | 980 | 1.54e-64 | 226 |
MS.gene027370.t1 | MTR_7g084090 | 49.321 | 221 | 108 | 3 | 184 | 400 | 422 | 642 | 1.15e-63 | 219 |
MS.gene027370.t1 | MTR_4g010550 | 39.249 | 293 | 148 | 7 | 226 | 515 | 199 | 464 | 1.55e-56 | 196 |
MS.gene027370.t1 | MTR_7g088370 | 30.816 | 331 | 200 | 6 | 186 | 511 | 395 | 701 | 1.26e-46 | 173 |
MS.gene027370.t1 | MTR_3g011440 | 31.566 | 396 | 229 | 12 | 151 | 511 | 272 | 660 | 2.07e-43 | 163 |
MS.gene027370.t1 | MTR_8g042750 | 34.471 | 293 | 179 | 6 | 225 | 511 | 399 | 684 | 3.10e-43 | 163 |
MS.gene027370.t1 | MTR_7g445710 | 33.663 | 303 | 155 | 10 | 225 | 515 | 275 | 543 | 2.35e-42 | 159 |
MS.gene027370.t1 | MTR_8g070075 | 32.680 | 306 | 188 | 10 | 186 | 485 | 456 | 749 | 6.96e-42 | 160 |
MS.gene027370.t1 | MTR_8g070070 | 33.660 | 306 | 185 | 10 | 186 | 485 | 463 | 756 | 4.52e-41 | 157 |
MS.gene027370.t1 | MTR_1g035420 | 33.013 | 312 | 195 | 8 | 186 | 493 | 352 | 653 | 1.31e-40 | 155 |
MS.gene027370.t1 | MTR_1g035400 | 32.372 | 312 | 193 | 9 | 186 | 491 | 271 | 570 | 1.47e-39 | 151 |
MS.gene027370.t1 | MTR_8g071030 | 35.249 | 261 | 154 | 7 | 229 | 485 | 487 | 736 | 2.27e-39 | 152 |
MS.gene027370.t1 | MTR_7g450730 | 32.069 | 290 | 145 | 7 | 228 | 515 | 266 | 505 | 1.96e-38 | 147 |
MS.gene027370.t1 | MTR_0376s0030 | 31.511 | 311 | 189 | 11 | 186 | 485 | 264 | 561 | 3.42e-36 | 142 |
MS.gene027370.t1 | MTR_8g078490 | 30.145 | 345 | 171 | 11 | 210 | 515 | 940 | 1253 | 1.60e-34 | 139 |
MS.gene027370.t1 | MTR_1g048950 | 33.227 | 313 | 161 | 10 | 210 | 515 | 262 | 533 | 5.17e-34 | 135 |
MS.gene027370.t1 | MTR_6g044690 | 28.615 | 325 | 184 | 11 | 184 | 485 | 264 | 563 | 3.80e-32 | 130 |
MS.gene027370.t1 | MTR_7g445530 | 32.721 | 272 | 137 | 10 | 225 | 484 | 275 | 512 | 3.86e-32 | 129 |
MS.gene027370.t1 | MTR_5g018850 | 30.723 | 332 | 158 | 11 | 225 | 515 | 1207 | 1507 | 1.52e-30 | 127 |
MS.gene027370.t1 | MTR_4g132610 | 36.652 | 221 | 115 | 5 | 296 | 515 | 851 | 1047 | 2.28e-30 | 126 |
MS.gene027370.t1 | MTR_1g069570 | 30.792 | 341 | 150 | 14 | 229 | 511 | 430 | 742 | 2.35e-30 | 125 |
MS.gene027370.t1 | MTR_6g043960 | 30.258 | 271 | 166 | 10 | 225 | 485 | 224 | 481 | 2.19e-28 | 118 |
MS.gene027370.t1 | MTR_1g080340 | 30.499 | 341 | 158 | 13 | 228 | 513 | 268 | 584 | 2.81e-28 | 119 |
MS.gene027370.t1 | MTR_8g078505 | 35.616 | 219 | 105 | 5 | 297 | 510 | 346 | 533 | 2.39e-27 | 115 |
MS.gene027370.t1 | MTR_7g098390 | 28.743 | 334 | 164 | 11 | 229 | 511 | 388 | 698 | 1.71e-25 | 110 |
MS.gene027370.t1 | MTR_2g054460 | 29.858 | 211 | 119 | 4 | 287 | 485 | 270 | 463 | 1.47e-23 | 103 |
MS.gene027370.t1 | MTR_7g445600 | 32.692 | 156 | 62 | 1 | 329 | 484 | 243 | 355 | 8.60e-22 | 97.1 |
MS.gene027370.t1 | MTR_1g069570 | 29.779 | 272 | 109 | 12 | 229 | 443 | 430 | 676 | 1.73e-19 | 92.4 |
MS.gene027370.t1 | MTR_1g012890 | 28.814 | 177 | 92 | 5 | 338 | 514 | 225 | 367 | 3.97e-12 | 68.2 |
MS.gene027370.t1 | MTR_1g064770 | 47.368 | 57 | 29 | 1 | 312 | 367 | 31 | 87 | 1.75e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027370.t1 | AT5G13960 | 55.357 | 336 | 145 | 4 | 184 | 515 | 156 | 490 | 6.91e-129 | 384 |
MS.gene027370.t1 | AT5G13960 | 55.357 | 336 | 145 | 4 | 184 | 515 | 290 | 624 | 3.38e-128 | 387 |
MS.gene027370.t1 | AT2G22740 | 38.629 | 321 | 155 | 9 | 214 | 515 | 493 | 790 | 2.70e-56 | 201 |
MS.gene027370.t1 | AT2G22740 | 38.629 | 321 | 155 | 9 | 214 | 515 | 493 | 790 | 2.70e-56 | 201 |
MS.gene027370.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 439 | 758 | 1.56e-55 | 199 |
MS.gene027370.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027370.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027370.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027370.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027370.t1 | AT1G73100 | 30.155 | 388 | 250 | 10 | 129 | 511 | 294 | 665 | 1.96e-46 | 172 |
MS.gene027370.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027370.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027370.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027370.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027370.t1 | AT4G13460 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 1.10e-41 | 158 |
MS.gene027370.t1 | AT4G13460 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 1.10e-41 | 158 |
MS.gene027370.t1 | AT5G04940 | 32.660 | 297 | 188 | 7 | 219 | 511 | 378 | 666 | 2.17e-41 | 158 |
MS.gene027370.t1 | AT5G04940 | 32.660 | 297 | 188 | 7 | 219 | 511 | 378 | 666 | 2.17e-41 | 158 |
MS.gene027370.t1 | AT1G17770 | 31.579 | 304 | 187 | 9 | 219 | 511 | 396 | 689 | 8.29e-35 | 139 |
MS.gene027370.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1066 | 1374 | 5.42e-32 | 131 |
MS.gene027370.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027370.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027370.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027370.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 146 | 460 | 1.64e-26 | 113 |
MS.gene027370.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 119 | 433 | 1.72e-26 | 112 |
MS.gene027370.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 130 | 444 | 1.86e-26 | 112 |
MS.gene027370.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 146 | 460 | 2.02e-26 | 112 |
MS.gene027370.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 119 | 433 | 2.19e-26 | 112 |
MS.gene027370.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 103 | 417 | 2.57e-26 | 112 |
MS.gene027370.t1 | AT2G24740 | 30.405 | 296 | 176 | 11 | 225 | 511 | 477 | 751 | 1.08e-25 | 111 |
MS.gene027370.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 438 | 617 | 3.45e-24 | 107 |
MS.gene027370.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 542 | 721 | 3.57e-24 | 107 |
MS.gene027370.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 542 | 721 | 3.57e-24 | 107 |
MS.gene027370.t1 | AT2G23740 | 32.959 | 267 | 121 | 13 | 210 | 443 | 1073 | 1314 | 6.54e-22 | 100 |
MS.gene027370.t1 | AT2G23740 | 32.959 | 267 | 121 | 13 | 210 | 443 | 1073 | 1314 | 6.54e-22 | 100 |
MS.gene027370.t1 | AT3G03750 | 31.933 | 238 | 126 | 7 | 274 | 510 | 143 | 345 | 1.01e-21 | 97.1 |
MS.gene027370.t1 | AT4G30860 | 28.218 | 202 | 103 | 6 | 313 | 514 | 305 | 464 | 7.75e-12 | 68.2 |
Find 100 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTCCAATGTTCGTCTTTGA+TGG | 0.216021 | 7.4:+50364533 | MS.gene027370:CDS |
TGCATAGATGCTGGTTCTTT+TGG | 0.238650 | 7.4:+50367615 | MS.gene027370:CDS |
AACTGACCATACCTCTCTTA+TGG | 0.257716 | 7.4:-50364415 | None:intergenic |
GAAACTTTGTTTCCACATTT+AGG | 0.257839 | 7.4:-50367116 | None:intergenic |
TTGGCTTTAGGTTCATTTAA+TGG | 0.273794 | 7.4:+50366311 | MS.gene027370:intron |
GTTTGCTCACAACTTCAAAA+TGG | 0.284170 | 7.4:+50364368 | MS.gene027370:CDS |
TCTTACCGCCCAACCTTTCT+TGG | 0.287241 | 7.4:-50367270 | None:intergenic |
ACTGACCATACCTCTCTTAT+GGG | 0.344917 | 7.4:-50364414 | None:intergenic |
TGGAAGTAAAGAGGAAAGTT+TGG | 0.346273 | 7.4:+50364331 | MS.gene027370:CDS |
CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7.4:-50367606 | None:intergenic |
CACACAATCAATAGTGTAGA+TGG | 0.372069 | 7.4:+50367410 | MS.gene027370:CDS |
AGAAGACATACCTCCCTATC+AGG | 0.387240 | 7.4:+50367746 | MS.gene027370:CDS |
TGTTCTTGTGCTAATCATAA+TGG | 0.392666 | 7.4:+50366845 | MS.gene027370:CDS |
GCACCAGTTGTCGAGTATAT+TGG | 0.400887 | 7.4:+50367317 | MS.gene027370:CDS |
ATTGATAACGAATACGTTCC+TGG | 0.401461 | 7.4:+50365771 | MS.gene027370:CDS |
TGGAAACAAAGTTTCTCAAC+AGG | 0.404546 | 7.4:+50367124 | MS.gene027370:CDS |
AGTATCTGATAAATAAGCTT+CGG | 0.405640 | 7.4:+50365808 | MS.gene027370:CDS |
TTGCATCCCGCAGCACTAGA+TGG | 0.412772 | 7.4:-50366794 | None:intergenic |
CTCTTATGGGAAATATCATC+TGG | 0.416121 | 7.4:-50364401 | None:intergenic |
GTATCTGATAAATAAGCTTC+GGG | 0.422102 | 7.4:+50365809 | MS.gene027370:CDS |
CTTACCGCCCAACCTTTCTT+GGG | 0.422197 | 7.4:-50367269 | None:intergenic |
GATAAATTGTTTATAGGCAA+TGG | 0.426330 | 7.4:-50367552 | None:intergenic |
CAGGAACTCACATATGACTA+TGG | 0.430156 | 7.4:+50367943 | MS.gene027370:intron |
TGTCCTTGAGAGAAACATCT+AGG | 0.434783 | 7.4:+50364576 | MS.gene027370:CDS |
ATTAGCACAAGAACATCGTT+TGG | 0.435566 | 7.4:-50366837 | None:intergenic |
AGCGAGAATCGACACAAGAT+AGG | 0.441709 | 7.4:+50365290 | MS.gene027370:CDS |
CATGATGAAAAGATTGAACT+TGG | 0.452253 | 7.4:+50364311 | MS.gene027370:CDS |
ACACATTGTACAAAGAGGTT+TGG | 0.458185 | 7.4:-50367672 | None:intergenic |
ATCGTACTCCCAAGAAAGGT+TGG | 0.459933 | 7.4:+50367261 | MS.gene027370:CDS |
TACAAAGAGGAATACCTGAT+AGG | 0.463396 | 7.4:-50367760 | None:intergenic |
TGGAGGATCATCAAAATCAT+TGG | 0.466153 | 7.4:-50366524 | None:intergenic |
TTCTGAAAATGAGGCTATGA+TGG | 0.472623 | 7.4:+50364199 | MS.gene027370:CDS |
ACACCAATATACTCGACAAC+TGG | 0.483092 | 7.4:-50367320 | None:intergenic |
AGTCTTGAACTCACTCTTGT+TGG | 0.483801 | 7.4:-50364224 | None:intergenic |
TCTTCTCAAAGAGTTGAGCT+TGG | 0.484140 | 7.4:-50364465 | None:intergenic |
ACATGGGACTTTATCCCATC+AGG | 0.487648 | 7.4:+50367293 | MS.gene027370:CDS |
ACAAAGAGGAATACCTGATA+GGG | 0.490411 | 7.4:-50367759 | None:intergenic |
GCTTCGGGAACTTGCTAAAG+TGG | 0.493084 | 7.4:+50365824 | MS.gene027370:CDS |
CTTAGCAAGGAGACGAAGAT+TGG | 0.494551 | 7.4:-50364603 | None:intergenic |
TCGTACTCCCAAGAAAGGTT+GGG | 0.500282 | 7.4:+50367262 | MS.gene027370:CDS |
CTAGATGGAACTTCAATGCT+TGG | 0.505910 | 7.4:-50366779 | None:intergenic |
TACACACTCGATAGTGTGTC+TGG | 0.507324 | 7.4:+50367967 | MS.gene027370:CDS |
CGACAACTGGTGCACCTGAT+GGG | 0.509774 | 7.4:-50367307 | None:intergenic |
TACTTCGAAGTAGTGATTCC+AGG | 0.513375 | 7.4:-50365789 | None:intergenic |
GTTTATCGTACTCCCAAGAA+AGG | 0.517387 | 7.4:+50367257 | MS.gene027370:CDS |
TCGACAACTGGTGCACCTGA+TGG | 0.518260 | 7.4:-50367308 | None:intergenic |
CAATCTTCGTCTCCTTGCTA+AGG | 0.519599 | 7.4:+50364604 | MS.gene027370:CDS |
GTTTCAAGATTTATCAACCA+TGG | 0.524532 | 7.4:+50367642 | MS.gene027370:CDS |
GAAGTTCCATCTAGTGCTGC+GGG | 0.529357 | 7.4:+50366788 | MS.gene027370:CDS |
AAACTCTTTCTTCTTCTCCA+AGG | 0.531848 | 7.4:+50366349 | MS.gene027370:CDS |
TGCTAAAGTGGGAACATACA+AGG | 0.533120 | 7.4:+50365836 | MS.gene027370:CDS |
TTTCATACAATAACATTGGC+CGG | 0.533464 | 7.4:+50366876 | MS.gene027370:CDS |
CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7.4:+50367606 | MS.gene027370:CDS |
CTAAGTAGAGACGATGAGCT+AGG | 0.538306 | 7.4:+50367344 | MS.gene027370:CDS |
TTTAGGTTCATTTAATGGAA+GGG | 0.538367 | 7.4:+50366316 | MS.gene027370:intron |
CTTTAGGTTCATTTAATGGA+AGG | 0.538474 | 7.4:+50366315 | MS.gene027370:intron |
GATAGTGTGTCTGGTTCTGA+TGG | 0.539465 | 7.4:+50367976 | MS.gene027370:CDS |
CACTAAGAGTTCTGAAAATG+AGG | 0.540450 | 7.4:+50364190 | MS.gene027370:CDS |
AGAGGTTTGGCTCACATCCA+TGG | 0.542639 | 7.4:-50367659 | None:intergenic |
CTAGACATCGTGGTCGAATG+TGG | 0.546755 | 7.4:+50367074 | MS.gene027370:CDS |
GATTGAACTTGGAAGTAAAG+AGG | 0.553834 | 7.4:+50364322 | MS.gene027370:CDS |
ACAATGTCATTGTGGTTCAA+AGG | 0.554813 | 7.4:+50368014 | MS.gene027370:CDS |
AAGGTTGGGCGGTAAGAACA+TGG | 0.558115 | 7.4:+50367276 | MS.gene027370:CDS |
AAGCCTAGATGTTTCTCTCA+AGG | 0.570477 | 7.4:-50364579 | None:intergenic |
GGGCTTAAGTTACCGACTTG+AGG | 0.574958 | 7.4:+50367145 | MS.gene027370:CDS |
GCGAGAATCGACACAAGATA+GGG | 0.577011 | 7.4:+50365291 | MS.gene027370:CDS |
TGTCATTCAAGTTCAAGAAG+TGG | 0.578513 | 7.4:+50364497 | MS.gene027370:CDS |
AGTCCATCAAAGACGAACAT+TGG | 0.579758 | 7.4:-50364536 | None:intergenic |
TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7.4:-50367677 | None:intergenic |
GAAGATATAATCATTTCCGT+TGG | 0.584617 | 7.4:-50367372 | None:intergenic |
TGTGGACCGCAATGTGGATG+CGG | 0.588020 | 7.4:+50367092 | MS.gene027370:CDS |
TGCTGCGGGATGCAATTGCA+AGG | 0.591722 | 7.4:+50366802 | MS.gene027370:CDS |
GTATGCAAGGACATTAGCAA+TGG | 0.598177 | 7.4:+50366475 | MS.gene027370:CDS |
TTACCTGTGGGTGCAACTGG+AGG | 0.602916 | 7.4:-50366541 | None:intergenic |
CTTCGGGAACTTGCTAAAGT+GGG | 0.602929 | 7.4:+50365825 | MS.gene027370:CDS |
TATTTCCCATAAGAGAGGTA+TGG | 0.605924 | 7.4:+50364409 | MS.gene027370:CDS |
GATCCTCCAGTTGCACCCAC+AGG | 0.606455 | 7.4:+50366538 | MS.gene027370:CDS |
AAGTTTGGTATCAACAACAA+AGG | 0.612619 | 7.4:+50364346 | MS.gene027370:CDS |
TGTGGATGCGGTCCTAAATG+TGG | 0.617446 | 7.4:+50367104 | MS.gene027370:CDS |
AGCACTACACGAGCTAGTCT+AGG | 0.619841 | 7.4:-50367714 | None:intergenic |
AATGTTATTGTATGAAAACT+CGG | 0.621218 | 7.4:-50366870 | None:intergenic |
CATTCGACCACGATGTCTAG+AGG | 0.624366 | 7.4:-50367071 | None:intergenic |
TATAATATTTACAACAGCAG+CGG | 0.628158 | 7.4:+50364269 | MS.gene027370:CDS |
CAATAGTGTAGATGGAAGAG+AGG | 0.628379 | 7.4:+50367418 | MS.gene027370:CDS |
ATTGTAAAATGACCTCAAGT+CGG | 0.632516 | 7.4:-50367157 | None:intergenic |
GATGATATTTCCCATAAGAG+AGG | 0.634933 | 7.4:+50364404 | MS.gene027370:CDS |
TGAAGTTCCATCTAGTGCTG+CGG | 0.634941 | 7.4:+50366787 | MS.gene027370:CDS |
TTGTATCACACACCTTAGCA+AGG | 0.638217 | 7.4:-50364616 | None:intergenic |
AAACAGCTACAATGTCATTG+TGG | 0.648614 | 7.4:+50368006 | MS.gene027370:CDS |
AAGAGGAATACCTGATAGGG+AGG | 0.649275 | 7.4:-50367756 | None:intergenic |
CTTGAACTTGAATGACAGCG+AGG | 0.651390 | 7.4:-50364491 | None:intergenic |
GCTGCGGGATGCAATTGCAA+GGG | 0.655088 | 7.4:+50366803 | MS.gene027370:CDS |
AGGTTGGGCGGTAAGAACAT+GGG | 0.665196 | 7.4:+50367277 | MS.gene027370:CDS |
TACTCCCAAGAAAGGTTGGG+CGG | 0.669811 | 7.4:+50367265 | MS.gene027370:CDS |
GTCGAATGTGGACCGCAATG+TGG | 0.680163 | 7.4:+50367086 | MS.gene027370:CDS |
GGAAACAAAGTTTCTCAACA+GGG | 0.682009 | 7.4:+50367125 | MS.gene027370:CDS |
TTAGGACCGCATCCACATTG+CGG | 0.698881 | 7.4:-50367098 | None:intergenic |
GATGAGCTAGGAAGTGCCAA+CGG | 0.706121 | 7.4:+50367356 | MS.gene027370:CDS |
GATTGAGCCTCTAGACATCG+TGG | 0.722557 | 7.4:+50367064 | MS.gene027370:CDS |
GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7.4:-50367704 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATATGTATGAAATTT+AGG | + | chr7.4:50367472-50367491 | MS.gene027370:intron | 10.0% |
!! | GTAAAAATTTAATAAACAAT+TGG | + | chr7.4:50367903-50367922 | MS.gene027370:intron | 10.0% |
!! | TAAAATATGTATGAAATTTA+GGG | + | chr7.4:50367473-50367492 | MS.gene027370:intron | 10.0% |
!!! | GTTTTTTCATTTTTAAAAAA+GGG | - | chr7.4:50366593-50366612 | None:intergenic | 10.0% |
!!! | TAATATCTTATTAGAATTTT+GGG | + | chr7.4:50366120-50366139 | MS.gene027370:intron | 10.0% |
!!! | TAATTGATTTTATTAGTTTT+TGG | + | chr7.4:50365212-50365231 | MS.gene027370:intron | 10.0% |
!!! | TGTTTTTTCATTTTTAAAAA+AGG | - | chr7.4:50366594-50366613 | None:intergenic | 10.0% |
!!! | TTAATATCTTATTAGAATTT+TGG | + | chr7.4:50366119-50366138 | MS.gene027370:intron | 10.0% |
!! | AAACAATTTATCTGAAAAAA+GGG | + | chr7.4:50367563-50367582 | MS.gene027370:CDS | 15.0% |
!! | ATTGTATTTATACAATTATG+AGG | + | chr7.4:50364907-50364926 | MS.gene027370:intron | 15.0% |
!! | GAAAAAAAAAAAAGGAAAAA+GGG | - | chr7.4:50366637-50366656 | None:intergenic | 15.0% |
!! | GAAAATACAAAGAAAATTAT+TGG | - | chr7.4:50365513-50365532 | None:intergenic | 15.0% |
!! | GTAAAACAAAAAATATTAGA+TGG | + | chr7.4:50366560-50366579 | MS.gene027370:intron | 15.0% |
!! | TAAACAATTTATCTGAAAAA+AGG | + | chr7.4:50367562-50367581 | MS.gene027370:CDS | 15.0% |
!! | TTATTTAACATTAAGTCAAA+AGG | - | chr7.4:50365355-50365374 | None:intergenic | 15.0% |
!!! | ATTTAAAATCATGATATCAA+GGG | - | chr7.4:50365453-50365472 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTAAACATGA+TGG | + | chr7.4:50367836-50367855 | MS.gene027370:intron | 15.0% |
!!! | TCATGATGTTTTAAAATTTT+AGG | + | chr7.4:50366725-50366744 | MS.gene027370:intron | 15.0% |
!!! | TTATTAAATTTTTACCATGA+AGG | - | chr7.4:50367898-50367917 | None:intergenic | 15.0% |
!!! | TTTTCAGATAAATTGTTTAT+AGG | - | chr7.4:50367561-50367580 | None:intergenic | 15.0% |
!! | AATGTTATTGTATGAAAACT+CGG | - | chr7.4:50366873-50366892 | None:intergenic | 20.0% |
!! | ACATAAATAATATGCAACAT+TGG | - | chr7.4:50364684-50364703 | None:intergenic | 20.0% |
!! | CGAAAAAAAAAAAAGGAAAA+AGG | - | chr7.4:50366638-50366657 | None:intergenic | 20.0% |
!! | TAAAGTTACTCCTAATAAAT+TGG | - | chr7.4:50365616-50365635 | None:intergenic | 20.0% |
!! | TCAACTAAGAAATTAACTAT+AGG | - | chr7.4:50365170-50365189 | None:intergenic | 20.0% |
!! | TCGTATTCTAATATTCAATT+TGG | + | chr7.4:50366292-50366311 | MS.gene027370:intron | 20.0% |
!! | TGTAGTAAGATGTATAAATA+TGG | + | chr7.4:50364847-50364866 | MS.gene027370:intron | 20.0% |
!! | TTACATATTACAAACATCAA+TGG | - | chr7.4:50367208-50367227 | None:intergenic | 20.0% |
!! | TTCTAATAAGATATTAAAGC+CGG | - | chr7.4:50366116-50366135 | None:intergenic | 20.0% |
!!! | AAAATTGAACAAAAGTACAA+AGG | - | chr7.4:50365969-50365988 | None:intergenic | 20.0% |
!!! | AATATTTTTTGTTTTACCTG+TGG | - | chr7.4:50366557-50366576 | None:intergenic | 20.0% |
!!! | ACATGTTTTATTTAAGGTTT+AGG | - | chr7.4:50365427-50365446 | None:intergenic | 20.0% |
!!! | AGACTATTTTCATCAATATA+TGG | - | chr7.4:50365681-50365700 | None:intergenic | 20.0% |
!!! | ATATTTTTTGTTTTACCTGT+GGG | - | chr7.4:50366556-50366575 | None:intergenic | 20.0% |
!!! | ATTTGTTTTTTTTCTTGTCA+GGG | + | chr7.4:50366916-50366935 | MS.gene027370:intron | 20.0% |
!!! | CATGTTTTATTTAAGGTTTA+GGG | - | chr7.4:50365426-50365445 | None:intergenic | 20.0% |
!!! | GAATATTGTTTCTTTTAGTT+TGG | + | chr7.4:50366453-50366472 | MS.gene027370:intron | 20.0% |
!!! | GATTTAAAATCATGATATCA+AGG | - | chr7.4:50365454-50365473 | None:intergenic | 20.0% |
!!! | GATTTTATTAGTTTTTGGTT+CGG | + | chr7.4:50365217-50365236 | MS.gene027370:intron | 20.0% |
! | AAGATGTATTAATATGGTTG+TGG | + | chr7.4:50365480-50365499 | MS.gene027370:intron | 25.0% |
! | AATATGTATGAAATTTAGGG+CGG | + | chr7.4:50367476-50367495 | MS.gene027370:intron | 25.0% |
! | AGTATCTGATAAATAAGCTT+CGG | + | chr7.4:50365808-50365827 | MS.gene027370:CDS | 25.0% |
! | ATCCAAAAGTAAAACAATAC+CGG | - | chr7.4:50366898-50366917 | None:intergenic | 25.0% |
! | ATTAGAATACGACATATAAG+TGG | - | chr7.4:50366284-50366303 | None:intergenic | 25.0% |
! | GATAAATTGTTTATAGGCAA+TGG | - | chr7.4:50367555-50367574 | None:intergenic | 25.0% |
! | GCTGTTAAGATGTATTAATA+TGG | + | chr7.4:50365474-50365493 | MS.gene027370:intron | 25.0% |
! | TATAATATTTACAACAGCAG+CGG | + | chr7.4:50364269-50364288 | MS.gene027370:CDS | 25.0% |
!! | ATTAACTTTCATTTTGTTGC+AGG | + | chr7.4:50365734-50365753 | MS.gene027370:intron | 25.0% |
!! | CGTATTAGTTTCTTTCTTTA+TGG | + | chr7.4:50365113-50365132 | MS.gene027370:intron | 25.0% |
!! | GAGTTTTCATACAATAACAT+TGG | + | chr7.4:50366872-50366891 | MS.gene027370:CDS | 25.0% |
!! | GGTATATTTTCTAACTTAAC+AGG | + | chr7.4:50367924-50367943 | MS.gene027370:intron | 25.0% |
!! | TTCAATCTTTTCATCATGTT+GGG | - | chr7.4:50364309-50364328 | None:intergenic | 25.0% |
!! | TTTAGGTTCATTTAATGGAA+GGG | + | chr7.4:50366316-50366335 | MS.gene027370:intron | 25.0% |
!! | TTTTATGATAACTTCCTTCA+TGG | + | chr7.4:50367881-50367900 | MS.gene027370:intron | 25.0% |
!!! | AAATCTCAAGTAATTTGCTT+TGG | - | chr7.4:50365022-50365041 | None:intergenic | 25.0% |
!!! | ATCTTATTAGAATTTTGGGT+TGG | + | chr7.4:50366124-50366143 | MS.gene027370:intron | 25.0% |
!!! | CTAATATTCAATTTGGCTTT+AGG | + | chr7.4:50366299-50366318 | MS.gene027370:intron | 25.0% |
!!! | GATTTGTTTTTTTTCTTGTC+AGG | + | chr7.4:50366915-50366934 | MS.gene027370:intron | 25.0% |
!!! | GGGAATACATGTTTTATTTA+AGG | - | chr7.4:50365433-50365452 | None:intergenic | 25.0% |
!!! | GGTTTGTTATTGCATATATA+TGG | + | chr7.4:50367857-50367876 | MS.gene027370:intron | 25.0% |
!!! | TCTTTGAAATTTTTCAGAGA+CGG | + | chr7.4:50367517-50367536 | MS.gene027370:intron | 25.0% |
AAGGAAAAAGGGACATATAT+TGG | - | chr7.4:50366626-50366645 | None:intergenic | 30.0% | |
AAGTTTGGTATCAACAACAA+AGG | + | chr7.4:50364346-50364365 | MS.gene027370:CDS | 30.0% | |
AGGTATTCCTCTTTGTAATA+AGG | + | chr7.4:50367766-50367785 | MS.gene027370:intron | 30.0% | |
ATTGTAAAATGACCTCAAGT+CGG | - | chr7.4:50367160-50367179 | None:intergenic | 30.0% | |
CATGATGAAAAGATTGAACT+TGG | + | chr7.4:50364311-50364330 | MS.gene027370:CDS | 30.0% | |
CATGCAGCGAAAAAAAAAAA+AGG | - | chr7.4:50366645-50366664 | None:intergenic | 30.0% | |
CTAAGATCCTTATTACAAAG+AGG | - | chr7.4:50367776-50367795 | None:intergenic | 30.0% | |
CTCTTTGTAATAAGGATCTT+AGG | + | chr7.4:50367774-50367793 | MS.gene027370:intron | 30.0% | |
CTTACAAAATCAGCTTGTAA+AGG | + | chr7.4:50366159-50366178 | MS.gene027370:intron | 30.0% | |
GAAGATATAATCATTTCCGT+TGG | - | chr7.4:50367375-50367394 | None:intergenic | 30.0% | |
GATTTCCAAACATCAATGAA+GGG | - | chr7.4:50365063-50365082 | None:intergenic | 30.0% | |
GTATCTGATAAATAAGCTTC+GGG | + | chr7.4:50365809-50365828 | MS.gene027370:CDS | 30.0% | |
GTTTCAAGATTTATCAACCA+TGG | + | chr7.4:50367642-50367661 | MS.gene027370:CDS | 30.0% | |
TAGAAAAAGTTTAGACGAGT+TGG | + | chr7.4:50364760-50364779 | MS.gene027370:intron | 30.0% | |
TATATCCCTTCATTGATGTT+TGG | + | chr7.4:50365055-50365074 | MS.gene027370:intron | 30.0% | |
TGATTTCCAAACATCAATGA+AGG | - | chr7.4:50365064-50365083 | None:intergenic | 30.0% | |
TGTTCTTGTGCTAATCATAA+TGG | + | chr7.4:50366845-50366864 | MS.gene027370:CDS | 30.0% | |
TTTCATACAATAACATTGGC+CGG | + | chr7.4:50366876-50366895 | MS.gene027370:CDS | 30.0% | |
TTTCTTGCTGCCAATTTATT+AGG | + | chr7.4:50365603-50365622 | MS.gene027370:intron | 30.0% | |
! | AAAATATTGCGACACTTTTG+AGG | + | chr7.4:50365315-50365334 | MS.gene027370:CDS | 30.0% |
! | AAATATTGCGACACTTTTGA+GGG | + | chr7.4:50365316-50365335 | MS.gene027370:CDS | 30.0% |
! | AAGAGATAAAGCCTTATCAT+GGG | - | chr7.4:50366208-50366227 | None:intergenic | 30.0% |
! | CTTTAGGTTCATTTAATGGA+AGG | + | chr7.4:50366315-50366334 | MS.gene027370:intron | 30.0% |
! | GAAACTTTGTTTCCACATTT+AGG | - | chr7.4:50367119-50367138 | None:intergenic | 30.0% |
! | GTTCAATCTTTTCATCATGT+TGG | - | chr7.4:50364310-50364329 | None:intergenic | 30.0% |
! | TGATCTTCATTTTCCTACTA+TGG | + | chr7.4:50365543-50365562 | MS.gene027370:intron | 30.0% |
! | TGCATGATGTCTTATTGAAT+GGG | + | chr7.4:50364996-50365015 | MS.gene027370:intron | 30.0% |
! | TTGCATGATGTCTTATTGAA+TGG | + | chr7.4:50364995-50365014 | MS.gene027370:intron | 30.0% |
!! | CTTTACAAGCTGATTTTGTA+AGG | - | chr7.4:50366161-50366180 | None:intergenic | 30.0% |
!! | GATTTGTTGATAACATACCT+TGG | - | chr7.4:50366369-50366388 | None:intergenic | 30.0% |
!! | TTGGCTTTAGGTTCATTTAA+TGG | + | chr7.4:50366311-50366330 | MS.gene027370:intron | 30.0% |
!!! | CTTTGATGGACTTGATTTTA+GGG | + | chr7.4:50364547-50364566 | MS.gene027370:CDS | 30.0% |
!!! | TCTTTGATGGACTTGATTTT+AGG | + | chr7.4:50364546-50364565 | MS.gene027370:CDS | 30.0% |
!!! | TTCTTTTAGTTTGGTATGCA+AGG | + | chr7.4:50366462-50366481 | MS.gene027370:intron | 30.0% |
!!! | TTTGATGGACTTGATTTTAG+GGG | + | chr7.4:50364548-50364567 | MS.gene027370:CDS | 30.0% |
AAACAGCTACAATGTCATTG+TGG | + | chr7.4:50368006-50368025 | MS.gene027370:CDS | 35.0% | |
AAACTACCTTTCTCTTACAC+AGG | + | chr7.4:50367235-50367254 | MS.gene027370:intron | 35.0% | |
AAACTCTTTCTTCTTCTCCA+AGG | + | chr7.4:50366349-50366368 | MS.gene027370:CDS | 35.0% | |
AAACTTCAAATGTCCAGTCA+TGG | - | chr7.4:50366043-50366062 | None:intergenic | 35.0% | |
ACAAAGAGGAATACCTGATA+GGG | - | chr7.4:50367762-50367781 | None:intergenic | 35.0% | |
ACAATGTCATTGTGGTTCAA+AGG | + | chr7.4:50368014-50368033 | MS.gene027370:CDS | 35.0% | |
ACACATTGTACAAAGAGGTT+TGG | - | chr7.4:50367675-50367694 | None:intergenic | 35.0% | |
AGAATGTGTGACAATTTCCA+TGG | - | chr7.4:50364803-50364822 | None:intergenic | 35.0% | |
ATTAGCACAAGAACATCGTT+TGG | - | chr7.4:50366840-50366859 | None:intergenic | 35.0% | |
CACACAATCAATAGTGTAGA+TGG | + | chr7.4:50367410-50367429 | MS.gene027370:CDS | 35.0% | |
CTCATCAAACATACCATAGT+AGG | - | chr7.4:50365559-50365578 | None:intergenic | 35.0% | |
CTCTTATGGGAAATATCATC+TGG | - | chr7.4:50364404-50364423 | None:intergenic | 35.0% | |
GATAAACCTGTGTAAGAGAA+AGG | - | chr7.4:50367244-50367263 | None:intergenic | 35.0% | |
GATGATATTTCCCATAAGAG+AGG | + | chr7.4:50364404-50364423 | MS.gene027370:CDS | 35.0% | |
GATTGAACTTGGAAGTAAAG+AGG | + | chr7.4:50364322-50364341 | MS.gene027370:CDS | 35.0% | |
GCAGCAAGAAATTGACTAAT+TGG | - | chr7.4:50365594-50365613 | None:intergenic | 35.0% | |
GGAAACAAAGTTTCTCAACA+GGG | + | chr7.4:50367125-50367144 | MS.gene027370:CDS | 35.0% | |
GTTTGCTCACAACTTCAAAA+TGG | + | chr7.4:50364368-50364387 | MS.gene027370:CDS | 35.0% | |
TACAAAGAGGAATACCTGAT+AGG | - | chr7.4:50367763-50367782 | None:intergenic | 35.0% | |
TACTACCAGATTTCCACTAT+CGG | - | chr7.4:50366069-50366088 | None:intergenic | 35.0% | |
TATTTCCCATAAGAGAGGTA+TGG | + | chr7.4:50364409-50364428 | MS.gene027370:CDS | 35.0% | |
TCACCTATAAACCCATGATA+AGG | + | chr7.4:50366194-50366213 | MS.gene027370:intron | 35.0% | |
TGAAAAAAGGGACGAGTTAA+TGG | + | chr7.4:50367575-50367594 | MS.gene027370:CDS | 35.0% | |
TGAGAACACATTGTACAAAG+AGG | - | chr7.4:50367680-50367699 | None:intergenic | 35.0% | |
TGGAAACAAAGTTTCTCAAC+AGG | + | chr7.4:50367124-50367143 | MS.gene027370:CDS | 35.0% | |
TGGAAGTAAAGAGGAAAGTT+TGG | + | chr7.4:50364331-50364350 | MS.gene027370:CDS | 35.0% | |
TGGAGGATCATCAAAATCAT+TGG | - | chr7.4:50366527-50366546 | None:intergenic | 35.0% | |
TTATCATGGGTTTATAGGTG+AGG | - | chr7.4:50366195-50366214 | None:intergenic | 35.0% | |
TTGTTGCAGGTAGAGAAAAA+TGG | + | chr7.4:50365747-50365766 | MS.gene027370:intron | 35.0% | |
! | AAGCCTTATCATGGGTTTAT+AGG | - | chr7.4:50366200-50366219 | None:intergenic | 35.0% |
! | AGGTTTAGGGTTTAAGCATT+AGG | - | chr7.4:50365413-50365432 | None:intergenic | 35.0% |
! | CTCATTTTCAGAACTCTTAG+TGG | - | chr7.4:50364192-50364211 | None:intergenic | 35.0% |
! | GAAGAGATAAAGCCTTATCA+TGG | - | chr7.4:50366209-50366228 | None:intergenic | 35.0% |
! | GGTTTAGGGTTTAAGCATTA+GGG | - | chr7.4:50365412-50365431 | None:intergenic | 35.0% |
! | TGTCATTCAAGTTCAAGAAG+TGG | + | chr7.4:50364497-50364516 | MS.gene027370:CDS | 35.0% |
! | TTCTGAAAATGAGGCTATGA+TGG | + | chr7.4:50364199-50364218 | MS.gene027370:CDS | 35.0% |
!! | ATTGATAACGAATACGTTCC+TGG | + | chr7.4:50365771-50365790 | MS.gene027370:CDS | 35.0% |
!! | CAAGCTGATTTTGTAAGGTT+TGG | - | chr7.4:50366156-50366175 | None:intergenic | 35.0% |
!! | CACTAAGAGTTCTGAAAATG+AGG | + | chr7.4:50364190-50364209 | MS.gene027370:CDS | 35.0% |
!! | GAAATTTTTCAGAGACGGTT+GGG | + | chr7.4:50367522-50367541 | MS.gene027370:intron | 35.0% |
!! | TGAAATTTTTCAGAGACGGT+TGG | + | chr7.4:50367521-50367540 | MS.gene027370:intron | 35.0% |
!! | TTTTCGCTGCATGCTTTATT+TGG | + | chr7.4:50366652-50366671 | MS.gene027370:intron | 35.0% |
AAAATCAGCTTGTAAAGGCG+AGG | + | chr7.4:50366164-50366183 | MS.gene027370:intron | 40.0% | |
AACTGACCATACCTCTCTTA+TGG | - | chr7.4:50364418-50364437 | None:intergenic | 40.0% | |
AAGCCTAGATGTTTCTCTCA+AGG | - | chr7.4:50364582-50364601 | None:intergenic | 40.0% | |
ACACCAATATACTCGACAAC+TGG | - | chr7.4:50367323-50367342 | None:intergenic | 40.0% | |
ACTACCAGATTTCCACTATC+GGG | - | chr7.4:50366068-50366087 | None:intergenic | 40.0% | |
ACTGACCATACCTCTCTTAT+GGG | - | chr7.4:50364417-50364436 | None:intergenic | 40.0% | |
AGTCCATCAAAGACGAACAT+TGG | - | chr7.4:50364539-50364558 | None:intergenic | 40.0% | |
AGTCTTGAACTCACTCTTGT+TGG | - | chr7.4:50364227-50364246 | None:intergenic | 40.0% | |
AGTGAGCCGATAGTGAATAT+TGG | + | chr7.4:50366089-50366108 | MS.gene027370:intron | 40.0% | |
CAATAGTGTAGATGGAAGAG+AGG | + | chr7.4:50367418-50367437 | MS.gene027370:CDS | 40.0% | |
CAGGAACTCACATATGACTA+TGG | + | chr7.4:50367943-50367962 | MS.gene027370:intron | 40.0% | |
CCAGCATCTATGCAATATTC+AGG | - | chr7.4:50367609-50367628 | None:intergenic | 40.0% | |
CCTGAATATTGCATAGATGC+TGG | + | chr7.4:50367606-50367625 | MS.gene027370:CDS | 40.0% | |
CTAGATGGAACTTCAATGCT+TGG | - | chr7.4:50366782-50366801 | None:intergenic | 40.0% | |
GTAACAACATCATTTGCAGC+AGG | + | chr7.4:50365253-50365272 | MS.gene027370:intron | 40.0% | |
GTATGCAAGGACATTAGCAA+TGG | + | chr7.4:50366475-50366494 | MS.gene027370:CDS | 40.0% | |
GTTTATCGTACTCCCAAGAA+AGG | + | chr7.4:50367257-50367276 | MS.gene027370:CDS | 40.0% | |
TACTTCGAAGTAGTGATTCC+AGG | - | chr7.4:50365792-50365811 | None:intergenic | 40.0% | |
TCTTCTCAAAGAGTTGAGCT+TGG | - | chr7.4:50364468-50364487 | None:intergenic | 40.0% | |
TGCTAAAGTGGGAACATACA+AGG | + | chr7.4:50365836-50365855 | MS.gene027370:CDS | 40.0% | |
TGTCCTTGAGAGAAACATCT+AGG | + | chr7.4:50364576-50364595 | MS.gene027370:CDS | 40.0% | |
TTGTATCACACACCTTAGCA+AGG | - | chr7.4:50364619-50364638 | None:intergenic | 40.0% | |
! | CGAGTTGGATTTCAGACTTT+CGG | + | chr7.4:50364775-50364794 | MS.gene027370:intron | 40.0% |
! | TTTGAAGTTTGACCCGATAG+TGG | + | chr7.4:50366053-50366072 | MS.gene027370:intron | 40.0% |
!! | GGCCGGTATTGTTTTACTTT+TGG | + | chr7.4:50366893-50366912 | MS.gene027370:intron | 40.0% |
!!! | TGCATAGATGCTGGTTCTTT+TGG | + | chr7.4:50367615-50367634 | MS.gene027370:CDS | 40.0% |
AAGAGGAATACCTGATAGGG+AGG | - | chr7.4:50367759-50367778 | None:intergenic | 45.0% | |
ACATGGGACTTTATCCCATC+AGG | + | chr7.4:50367293-50367312 | MS.gene027370:CDS | 45.0% | |
AGAAGACATACCTCCCTATC+AGG | + | chr7.4:50367746-50367765 | MS.gene027370:CDS | 45.0% | |
AGCGAGAATCGACACAAGAT+AGG | + | chr7.4:50365290-50365309 | MS.gene027370:CDS | 45.0% | |
ATCGTACTCCCAAGAAAGGT+TGG | + | chr7.4:50367261-50367280 | MS.gene027370:CDS | 45.0% | |
ATTTCAGACTTTCGGAGCCA+TGG | + | chr7.4:50364783-50364802 | MS.gene027370:intron | 45.0% | |
CAATCTTCGTCTCCTTGCTA+AGG | + | chr7.4:50364604-50364623 | MS.gene027370:CDS | 45.0% | |
CGAGTTGTATCATGCAGCTA+GGG | - | chr7.4:50365656-50365675 | None:intergenic | 45.0% | |
CGTCCAATGTTCGTCTTTGA+TGG | + | chr7.4:50364533-50364552 | MS.gene027370:CDS | 45.0% | |
CTAAGTAGAGACGATGAGCT+AGG | + | chr7.4:50367344-50367363 | MS.gene027370:CDS | 45.0% | |
CTTAGCAAGGAGACGAAGAT+TGG | - | chr7.4:50364606-50364625 | None:intergenic | 45.0% | |
CTTGAACTTGAATGACAGCG+AGG | - | chr7.4:50364494-50364513 | None:intergenic | 45.0% | |
GCACCAGTTGTCGAGTATAT+TGG | + | chr7.4:50367317-50367336 | MS.gene027370:CDS | 45.0% | |
GCCGATAGTGAATATTGGAC+CGG | + | chr7.4:50366094-50366113 | MS.gene027370:intron | 45.0% | |
GCCGGTCCAATATTCACTAT+CGG | - | chr7.4:50366098-50366117 | None:intergenic | 45.0% | |
GCGAGAATCGACACAAGATA+GGG | + | chr7.4:50365291-50365310 | MS.gene027370:CDS | 45.0% | |
GGGTTTAAGCATTAGGGCTA+AGG | - | chr7.4:50365406-50365425 | None:intergenic | 45.0% | |
TACACACTCGATAGTGTGTC+TGG | + | chr7.4:50367967-50367986 | MS.gene027370:CDS | 45.0% | |
TCGTACTCCCAAGAAAGGTT+GGG | + | chr7.4:50367262-50367281 | MS.gene027370:CDS | 45.0% | |
TGAAGTTCCATCTAGTGCTG+CGG | + | chr7.4:50366787-50366806 | MS.gene027370:CDS | 45.0% | |
!! | CTTCGGGAACTTGCTAAAGT+GGG | + | chr7.4:50365825-50365844 | MS.gene027370:CDS | 45.0% |
!! | GATAGTGTGTCTGGTTCTGA+TGG | + | chr7.4:50367976-50367995 | MS.gene027370:CDS | 45.0% |
!! | TTGACCCGATAGTGGAAATC+TGG | + | chr7.4:50366061-50366080 | MS.gene027370:intron | 45.0% |
AAGGTTGGGCGGTAAGAACA+TGG | + | chr7.4:50367276-50367295 | MS.gene027370:CDS | 50.0% | |
AGGTTGGGCGGTAAGAACAT+GGG | + | chr7.4:50367277-50367296 | MS.gene027370:CDS | 50.0% | |
CATTCGACCACGATGTCTAG+AGG | - | chr7.4:50367074-50367093 | None:intergenic | 50.0% | |
CTAGACATCGTGGTCGAATG+TGG | + | chr7.4:50367074-50367093 | MS.gene027370:CDS | 50.0% | |
CTTACCGCCCAACCTTTCTT+GGG | - | chr7.4:50367272-50367291 | None:intergenic | 50.0% | |
GAAGTTCCATCTAGTGCTGC+GGG | + | chr7.4:50366788-50366807 | MS.gene027370:CDS | 50.0% | |
GATTGAGCCTCTAGACATCG+TGG | + | chr7.4:50367064-50367083 | MS.gene027370:CDS | 50.0% | |
GCGAGTTGTATCATGCAGCT+AGG | - | chr7.4:50365657-50365676 | None:intergenic | 50.0% | |
TACTCCCAAGAAAGGTTGGG+CGG | + | chr7.4:50367265-50367284 | MS.gene027370:CDS | 50.0% | |
TCTTACCGCCCAACCTTTCT+TGG | - | chr7.4:50367273-50367292 | None:intergenic | 50.0% | |
TGTGGATGCGGTCCTAAATG+TGG | + | chr7.4:50367104-50367123 | MS.gene027370:CDS | 50.0% | |
TTAGGACCGCATCCACATTG+CGG | - | chr7.4:50367101-50367120 | None:intergenic | 50.0% | |
! | AGAGGTTTGGCTCACATCCA+TGG | - | chr7.4:50367662-50367681 | None:intergenic | 50.0% |
! | AGCACTACACGAGCTAGTCT+AGG | - | chr7.4:50367717-50367736 | None:intergenic | 50.0% |
! | GAGCTAGTCTAGGATCTCTG+TGG | - | chr7.4:50367707-50367726 | None:intergenic | 50.0% |
! | GTTTTACCTGTGGGTGCAAC+TGG | - | chr7.4:50366547-50366566 | None:intergenic | 50.0% |
!! | GATGAGCTAGGAAGTGCCAA+CGG | + | chr7.4:50367356-50367375 | MS.gene027370:CDS | 50.0% |
!! | GCTTCGGGAACTTGCTAAAG+TGG | + | chr7.4:50365824-50365843 | MS.gene027370:CDS | 50.0% |
!! | GGGCTTAAGTTACCGACTTG+AGG | + | chr7.4:50367145-50367164 | MS.gene027370:CDS | 50.0% |
CGACAACTGGTGCACCTGAT+GGG | - | chr7.4:50367310-50367329 | None:intergenic | 55.0% | |
GCTGCGGGATGCAATTGCAA+GGG | + | chr7.4:50366803-50366822 | MS.gene027370:CDS | 55.0% | |
GTCCAGTCATGGACGTGAGA+GGG | - | chr7.4:50366032-50366051 | None:intergenic | 55.0% | |
GTCGAATGTGGACCGCAATG+TGG | + | chr7.4:50367086-50367105 | MS.gene027370:CDS | 55.0% | |
TCGACAACTGGTGCACCTGA+TGG | - | chr7.4:50367311-50367330 | None:intergenic | 55.0% | |
TGCTGCGGGATGCAATTGCA+AGG | + | chr7.4:50366802-50366821 | MS.gene027370:CDS | 55.0% | |
TGTCCAGTCATGGACGTGAG+AGG | - | chr7.4:50366033-50366052 | None:intergenic | 55.0% | |
TGTGGACCGCAATGTGGATG+CGG | + | chr7.4:50367092-50367111 | MS.gene027370:CDS | 55.0% | |
TTACCTGTGGGTGCAACTGG+AGG | - | chr7.4:50366544-50366563 | None:intergenic | 55.0% | |
TTGCATCCCGCAGCACTAGA+TGG | - | chr7.4:50366797-50366816 | None:intergenic | 55.0% | |
CACCCTCTCACGTCCATGAC+TGG | + | chr7.4:50366027-50366046 | MS.gene027370:intron | 60.0% | |
GATCCTCCAGTTGCACCCAC+AGG | + | chr7.4:50366538-50366557 | MS.gene027370:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 50364182 | 50368059 | 50364182 | ID=MS.gene027370 |
chr7.4 | mRNA | 50364182 | 50368059 | 50364182 | ID=MS.gene027370.t1;Parent=MS.gene027370 |
chr7.4 | exon | 50364182 | 50364625 | 50364182 | ID=MS.gene027370.t1.exon1;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50364182 | 50364625 | 50364182 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50365272 | 50365346 | 50365272 | ID=MS.gene027370.t1.exon2;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50365272 | 50365346 | 50365272 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50365756 | 50365857 | 50365756 | ID=MS.gene027370.t1.exon3;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50365756 | 50365857 | 50365756 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50366321 | 50366370 | 50366321 | ID=MS.gene027370.t1.exon4;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50366321 | 50366370 | 50366321 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50366471 | 50366559 | 50366471 | ID=MS.gene027370.t1.exon5;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50366471 | 50366559 | 50366471 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50366747 | 50366897 | 50366747 | ID=MS.gene027370.t1.exon6;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50366747 | 50366897 | 50366747 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50367061 | 50367166 | 50367061 | ID=MS.gene027370.t1.exon7;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50367061 | 50367166 | 50367061 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50367257 | 50367439 | 50367257 | ID=MS.gene027370.t1.exon8;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50367257 | 50367439 | 50367257 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50367534 | 50367767 | 50367534 | ID=MS.gene027370.t1.exon9;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50367534 | 50367767 | 50367534 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
chr7.4 | exon | 50367946 | 50368059 | 50367946 | ID=MS.gene027370.t1.exon10;Parent=MS.gene027370.t1 |
chr7.4 | CDS | 50367946 | 50368059 | 50367946 | ID=cds.MS.gene027370.t1;Parent=MS.gene027370.t1 |
Gene Sequence |
Protein sequence |