Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027373.t1 | AES79015.2 | 84.3 | 561 | 37 | 4 | 1 | 515 | 1 | 556 | 7.90E-239 | 836.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027373.t1 | Q8GZB6 | 54.0 | 337 | 148 | 5 | 184 | 515 | 290 | 624 | 1.7e-101 | 371.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027373.t1 | G7KY38 | 84.3 | 561 | 37 | 4 | 1 | 515 | 1 | 556 | 5.7e-239 | 836.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene027373.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027373.t1 | MTR_7g052480 | 86.096 | 561 | 27 | 4 | 1 | 515 | 1 | 556 | 0.0 | 962 |
MS.gene027373.t1 | MTR_7g084090 | 55.357 | 336 | 146 | 3 | 184 | 515 | 422 | 757 | 6.91e-124 | 380 |
MS.gene027373.t1 | MTR_6g061270 | 55.060 | 336 | 147 | 3 | 184 | 515 | 359 | 694 | 9.00e-122 | 373 |
MS.gene027373.t1 | MTR_6g061200 | 51.190 | 336 | 131 | 4 | 184 | 515 | 359 | 665 | 5.62e-107 | 333 |
MS.gene027373.t1 | MTR_5g013420 | 46.207 | 290 | 142 | 8 | 229 | 515 | 811 | 1089 | 2.41e-69 | 241 |
MS.gene027373.t1 | MTR_5g013420 | 45.862 | 290 | 143 | 8 | 229 | 515 | 811 | 1089 | 2.56e-68 | 238 |
MS.gene027373.t1 | MTR_4g010830 | 43.537 | 294 | 152 | 9 | 225 | 515 | 698 | 980 | 1.54e-64 | 226 |
MS.gene027373.t1 | MTR_7g084090 | 49.321 | 221 | 108 | 3 | 184 | 400 | 422 | 642 | 1.15e-63 | 219 |
MS.gene027373.t1 | MTR_4g010550 | 39.249 | 293 | 148 | 7 | 226 | 515 | 199 | 464 | 1.55e-56 | 196 |
MS.gene027373.t1 | MTR_7g088370 | 30.816 | 331 | 200 | 6 | 186 | 511 | 395 | 701 | 1.26e-46 | 173 |
MS.gene027373.t1 | MTR_3g011440 | 31.566 | 396 | 229 | 12 | 151 | 511 | 272 | 660 | 2.07e-43 | 163 |
MS.gene027373.t1 | MTR_8g042750 | 34.471 | 293 | 179 | 6 | 225 | 511 | 399 | 684 | 3.10e-43 | 163 |
MS.gene027373.t1 | MTR_7g445710 | 33.663 | 303 | 155 | 10 | 225 | 515 | 275 | 543 | 2.35e-42 | 159 |
MS.gene027373.t1 | MTR_8g070075 | 32.680 | 306 | 188 | 10 | 186 | 485 | 456 | 749 | 6.96e-42 | 160 |
MS.gene027373.t1 | MTR_8g070070 | 33.660 | 306 | 185 | 10 | 186 | 485 | 463 | 756 | 4.52e-41 | 157 |
MS.gene027373.t1 | MTR_1g035420 | 33.013 | 312 | 195 | 8 | 186 | 493 | 352 | 653 | 1.31e-40 | 155 |
MS.gene027373.t1 | MTR_1g035400 | 32.372 | 312 | 193 | 9 | 186 | 491 | 271 | 570 | 1.47e-39 | 151 |
MS.gene027373.t1 | MTR_8g071030 | 35.249 | 261 | 154 | 7 | 229 | 485 | 487 | 736 | 2.27e-39 | 152 |
MS.gene027373.t1 | MTR_7g450730 | 32.069 | 290 | 145 | 7 | 228 | 515 | 266 | 505 | 1.96e-38 | 147 |
MS.gene027373.t1 | MTR_0376s0030 | 31.511 | 311 | 189 | 11 | 186 | 485 | 264 | 561 | 3.42e-36 | 142 |
MS.gene027373.t1 | MTR_8g078490 | 30.145 | 345 | 171 | 11 | 210 | 515 | 940 | 1253 | 1.60e-34 | 139 |
MS.gene027373.t1 | MTR_1g048950 | 33.227 | 313 | 161 | 10 | 210 | 515 | 262 | 533 | 5.17e-34 | 135 |
MS.gene027373.t1 | MTR_6g044690 | 28.615 | 325 | 184 | 11 | 184 | 485 | 264 | 563 | 3.80e-32 | 130 |
MS.gene027373.t1 | MTR_7g445530 | 32.721 | 272 | 137 | 10 | 225 | 484 | 275 | 512 | 3.86e-32 | 129 |
MS.gene027373.t1 | MTR_5g018850 | 30.723 | 332 | 158 | 11 | 225 | 515 | 1207 | 1507 | 1.52e-30 | 127 |
MS.gene027373.t1 | MTR_4g132610 | 36.652 | 221 | 115 | 5 | 296 | 515 | 851 | 1047 | 2.28e-30 | 126 |
MS.gene027373.t1 | MTR_1g069570 | 30.792 | 341 | 150 | 14 | 229 | 511 | 430 | 742 | 2.35e-30 | 125 |
MS.gene027373.t1 | MTR_6g043960 | 30.258 | 271 | 166 | 10 | 225 | 485 | 224 | 481 | 2.19e-28 | 118 |
MS.gene027373.t1 | MTR_1g080340 | 30.499 | 341 | 158 | 13 | 228 | 513 | 268 | 584 | 2.81e-28 | 119 |
MS.gene027373.t1 | MTR_8g078505 | 35.616 | 219 | 105 | 5 | 297 | 510 | 346 | 533 | 2.39e-27 | 115 |
MS.gene027373.t1 | MTR_7g098390 | 28.743 | 334 | 164 | 11 | 229 | 511 | 388 | 698 | 1.71e-25 | 110 |
MS.gene027373.t1 | MTR_2g054460 | 29.858 | 211 | 119 | 4 | 287 | 485 | 270 | 463 | 1.47e-23 | 103 |
MS.gene027373.t1 | MTR_7g445600 | 32.692 | 156 | 62 | 1 | 329 | 484 | 243 | 355 | 8.60e-22 | 97.1 |
MS.gene027373.t1 | MTR_1g069570 | 29.779 | 272 | 109 | 12 | 229 | 443 | 430 | 676 | 1.73e-19 | 92.4 |
MS.gene027373.t1 | MTR_1g012890 | 28.814 | 177 | 92 | 5 | 338 | 514 | 225 | 367 | 3.97e-12 | 68.2 |
MS.gene027373.t1 | MTR_1g064770 | 47.368 | 57 | 29 | 1 | 312 | 367 | 31 | 87 | 1.75e-11 | 60.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027373.t1 | AT5G13960 | 55.357 | 336 | 145 | 4 | 184 | 515 | 156 | 490 | 6.91e-129 | 384 |
MS.gene027373.t1 | AT5G13960 | 55.357 | 336 | 145 | 4 | 184 | 515 | 290 | 624 | 3.38e-128 | 387 |
MS.gene027373.t1 | AT2G22740 | 38.629 | 321 | 155 | 9 | 214 | 515 | 493 | 790 | 2.70e-56 | 201 |
MS.gene027373.t1 | AT2G22740 | 38.629 | 321 | 155 | 9 | 214 | 515 | 493 | 790 | 2.70e-56 | 201 |
MS.gene027373.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 439 | 758 | 1.56e-55 | 199 |
MS.gene027373.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027373.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027373.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027373.t1 | AT2G35160 | 35.014 | 357 | 187 | 9 | 167 | 515 | 475 | 794 | 3.13e-55 | 198 |
MS.gene027373.t1 | AT1G73100 | 30.155 | 388 | 250 | 10 | 129 | 511 | 294 | 665 | 1.96e-46 | 172 |
MS.gene027373.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027373.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027373.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027373.t1 | AT2G33290 | 35.577 | 312 | 167 | 11 | 204 | 493 | 346 | 645 | 3.69e-43 | 162 |
MS.gene027373.t1 | AT4G13460 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 1.10e-41 | 158 |
MS.gene027373.t1 | AT4G13460 | 32.581 | 310 | 193 | 9 | 186 | 489 | 342 | 641 | 1.10e-41 | 158 |
MS.gene027373.t1 | AT5G04940 | 32.660 | 297 | 188 | 7 | 219 | 511 | 378 | 666 | 2.17e-41 | 158 |
MS.gene027373.t1 | AT5G04940 | 32.660 | 297 | 188 | 7 | 219 | 511 | 378 | 666 | 2.17e-41 | 158 |
MS.gene027373.t1 | AT1G17770 | 31.579 | 304 | 187 | 9 | 219 | 511 | 396 | 689 | 8.29e-35 | 139 |
MS.gene027373.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1066 | 1374 | 5.42e-32 | 131 |
MS.gene027373.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027373.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027373.t1 | AT2G23740 | 32.544 | 338 | 166 | 14 | 210 | 514 | 1073 | 1381 | 5.59e-32 | 131 |
MS.gene027373.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 146 | 460 | 1.64e-26 | 113 |
MS.gene027373.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 119 | 433 | 1.72e-26 | 112 |
MS.gene027373.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 130 | 444 | 1.86e-26 | 112 |
MS.gene027373.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 146 | 460 | 2.02e-26 | 112 |
MS.gene027373.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 119 | 433 | 2.19e-26 | 112 |
MS.gene027373.t1 | AT3G04380 | 28.402 | 338 | 166 | 10 | 229 | 513 | 103 | 417 | 2.57e-26 | 112 |
MS.gene027373.t1 | AT2G24740 | 30.405 | 296 | 176 | 11 | 225 | 511 | 477 | 751 | 1.08e-25 | 111 |
MS.gene027373.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 438 | 617 | 3.45e-24 | 107 |
MS.gene027373.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 542 | 721 | 3.57e-24 | 107 |
MS.gene027373.t1 | AT1G04050 | 32.524 | 206 | 109 | 6 | 312 | 513 | 542 | 721 | 3.57e-24 | 107 |
MS.gene027373.t1 | AT2G23740 | 32.959 | 267 | 121 | 13 | 210 | 443 | 1073 | 1314 | 6.54e-22 | 100 |
MS.gene027373.t1 | AT2G23740 | 32.959 | 267 | 121 | 13 | 210 | 443 | 1073 | 1314 | 6.54e-22 | 100 |
MS.gene027373.t1 | AT3G03750 | 31.933 | 238 | 126 | 7 | 274 | 510 | 143 | 345 | 1.01e-21 | 97.1 |
MS.gene027373.t1 | AT4G30860 | 28.218 | 202 | 103 | 6 | 313 | 514 | 305 | 464 | 7.75e-12 | 68.2 |
Find 100 sgRNAs with CRISPR-Local
Find 217 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTCCAATGTTCGTCTTTGA+TGG | 0.216021 | 7.4:+50386393 | MS.gene027373:CDS |
TGCATAGATGCTGGTTCTTT+TGG | 0.238650 | 7.4:+50389475 | MS.gene027373:CDS |
AACTGACCATACCTCTCTTA+TGG | 0.257716 | 7.4:-50386275 | None:intergenic |
GAAACTTTGTTTCCACATTT+AGG | 0.257839 | 7.4:-50388976 | None:intergenic |
TTGGCTTTAGGTTCATTTAA+TGG | 0.273794 | 7.4:+50388171 | MS.gene027373:intron |
GTTTGCTCACAACTTCAAAA+TGG | 0.284170 | 7.4:+50386228 | MS.gene027373:CDS |
TCTTACCGCCCAACCTTTCT+TGG | 0.287241 | 7.4:-50389130 | None:intergenic |
ACTGACCATACCTCTCTTAT+GGG | 0.344917 | 7.4:-50386274 | None:intergenic |
TGGAAGTAAAGAGGAAAGTT+TGG | 0.346273 | 7.4:+50386191 | MS.gene027373:CDS |
CCAGCATCTATGCAATATTC+AGG | 0.354345 | 7.4:-50389466 | None:intergenic |
CACACAATCAATAGTGTAGA+TGG | 0.372069 | 7.4:+50389270 | MS.gene027373:CDS |
AGAAGACATACCTCCCTATC+AGG | 0.387240 | 7.4:+50389606 | MS.gene027373:CDS |
TGTTCTTGTGCTAATCATAA+TGG | 0.392666 | 7.4:+50388705 | MS.gene027373:CDS |
GCACCAGTTGTCGAGTATAT+TGG | 0.400887 | 7.4:+50389177 | MS.gene027373:CDS |
ATTGATAACGAATACGTTCC+TGG | 0.401461 | 7.4:+50387631 | MS.gene027373:CDS |
TGGAAACAAAGTTTCTCAAC+AGG | 0.404546 | 7.4:+50388984 | MS.gene027373:CDS |
AGTATCTGATAAATAAGCTT+CGG | 0.405640 | 7.4:+50387668 | MS.gene027373:CDS |
TTGCATCCCGCAGCACTAGA+TGG | 0.412772 | 7.4:-50388654 | None:intergenic |
CTCTTATGGGAAATATCATC+TGG | 0.416121 | 7.4:-50386261 | None:intergenic |
GTATCTGATAAATAAGCTTC+GGG | 0.422102 | 7.4:+50387669 | MS.gene027373:CDS |
CTTACCGCCCAACCTTTCTT+GGG | 0.422197 | 7.4:-50389129 | None:intergenic |
GATAAATTGTTTATAGGCAA+TGG | 0.426330 | 7.4:-50389412 | None:intergenic |
CAGGAACTCACATATGACTA+TGG | 0.430156 | 7.4:+50389803 | MS.gene027373:intron |
TGTCCTTGAGAGAAACATCT+AGG | 0.434783 | 7.4:+50386436 | MS.gene027373:CDS |
ATTAGCACAAGAACATCGTT+TGG | 0.435566 | 7.4:-50388697 | None:intergenic |
AGCGAGAATCGACACAAGAT+AGG | 0.441709 | 7.4:+50387150 | MS.gene027373:CDS |
CATGATGAAAAGATTGAACT+TGG | 0.452253 | 7.4:+50386171 | MS.gene027373:CDS |
ACACATTGTACAAAGAGGTT+TGG | 0.458185 | 7.4:-50389532 | None:intergenic |
ATCGTACTCCCAAGAAAGGT+TGG | 0.459933 | 7.4:+50389121 | MS.gene027373:CDS |
TACAAAGAGGAATACCTGAT+AGG | 0.463396 | 7.4:-50389620 | None:intergenic |
TGGAGGATCATCAAAATCAT+TGG | 0.466153 | 7.4:-50388384 | None:intergenic |
TTCTGAAAATGAGGCTATGA+TGG | 0.472623 | 7.4:+50386059 | MS.gene027373:CDS |
ACACCAATATACTCGACAAC+TGG | 0.483092 | 7.4:-50389180 | None:intergenic |
AGTCTTGAACTCACTCTTGT+TGG | 0.483801 | 7.4:-50386084 | None:intergenic |
TCTTCTCAAAGAGTTGAGCT+TGG | 0.484140 | 7.4:-50386325 | None:intergenic |
ACATGGGACTTTATCCCATC+AGG | 0.487648 | 7.4:+50389153 | MS.gene027373:CDS |
ACAAAGAGGAATACCTGATA+GGG | 0.490411 | 7.4:-50389619 | None:intergenic |
GCTTCGGGAACTTGCTAAAG+TGG | 0.493084 | 7.4:+50387684 | MS.gene027373:CDS |
CTTAGCAAGGAGACGAAGAT+TGG | 0.494551 | 7.4:-50386463 | None:intergenic |
TCGTACTCCCAAGAAAGGTT+GGG | 0.500282 | 7.4:+50389122 | MS.gene027373:CDS |
CTAGATGGAACTTCAATGCT+TGG | 0.505910 | 7.4:-50388639 | None:intergenic |
TACACACTCGATAGTGTGTC+TGG | 0.507324 | 7.4:+50389827 | MS.gene027373:CDS |
CGACAACTGGTGCACCTGAT+GGG | 0.509774 | 7.4:-50389167 | None:intergenic |
TACTTCGAAGTAGTGATTCC+AGG | 0.513375 | 7.4:-50387649 | None:intergenic |
GTTTATCGTACTCCCAAGAA+AGG | 0.517387 | 7.4:+50389117 | MS.gene027373:CDS |
TCGACAACTGGTGCACCTGA+TGG | 0.518260 | 7.4:-50389168 | None:intergenic |
CAATCTTCGTCTCCTTGCTA+AGG | 0.519599 | 7.4:+50386464 | MS.gene027373:CDS |
GTTTCAAGATTTATCAACCA+TGG | 0.524532 | 7.4:+50389502 | MS.gene027373:CDS |
GAAGTTCCATCTAGTGCTGC+GGG | 0.529357 | 7.4:+50388648 | MS.gene027373:CDS |
AAACTCTTTCTTCTTCTCCA+AGG | 0.531848 | 7.4:+50388209 | MS.gene027373:CDS |
TGCTAAAGTGGGAACATACA+AGG | 0.533120 | 7.4:+50387696 | MS.gene027373:CDS |
TTTCATACAATAACATTGGC+CGG | 0.533464 | 7.4:+50388736 | MS.gene027373:CDS |
CCTGAATATTGCATAGATGC+TGG | 0.535805 | 7.4:+50389466 | MS.gene027373:CDS |
CTAAGTAGAGACGATGAGCT+AGG | 0.538306 | 7.4:+50389204 | MS.gene027373:CDS |
TTTAGGTTCATTTAATGGAA+GGG | 0.538367 | 7.4:+50388176 | MS.gene027373:intron |
CTTTAGGTTCATTTAATGGA+AGG | 0.538474 | 7.4:+50388175 | MS.gene027373:intron |
GATAGTGTGTCTGGTTCTGA+TGG | 0.539465 | 7.4:+50389836 | MS.gene027373:CDS |
CACTAAGAGTTCTGAAAATG+AGG | 0.540450 | 7.4:+50386050 | MS.gene027373:CDS |
AGAGGTTTGGCTCACATCCA+TGG | 0.542639 | 7.4:-50389519 | None:intergenic |
CTAGACATCGTGGTCGAATG+TGG | 0.546755 | 7.4:+50388934 | MS.gene027373:CDS |
GATTGAACTTGGAAGTAAAG+AGG | 0.553834 | 7.4:+50386182 | MS.gene027373:CDS |
ACAATGTCATTGTGGTTCAA+AGG | 0.554813 | 7.4:+50389874 | MS.gene027373:CDS |
AAGGTTGGGCGGTAAGAACA+TGG | 0.558115 | 7.4:+50389136 | MS.gene027373:CDS |
AAGCCTAGATGTTTCTCTCA+AGG | 0.570477 | 7.4:-50386439 | None:intergenic |
GGGCTTAAGTTACCGACTTG+AGG | 0.574958 | 7.4:+50389005 | MS.gene027373:CDS |
GCGAGAATCGACACAAGATA+GGG | 0.577011 | 7.4:+50387151 | MS.gene027373:CDS |
TGTCATTCAAGTTCAAGAAG+TGG | 0.578513 | 7.4:+50386357 | MS.gene027373:CDS |
AGTCCATCAAAGACGAACAT+TGG | 0.579758 | 7.4:-50386396 | None:intergenic |
TGAGAACACATTGTACAAAG+AGG | 0.579762 | 7.4:-50389537 | None:intergenic |
GAAGATATAATCATTTCCGT+TGG | 0.584617 | 7.4:-50389232 | None:intergenic |
TGTGGACCGCAATGTGGATG+CGG | 0.588020 | 7.4:+50388952 | MS.gene027373:CDS |
TGCTGCGGGATGCAATTGCA+AGG | 0.591722 | 7.4:+50388662 | MS.gene027373:CDS |
GTATGCAAGGACATTAGCAA+TGG | 0.598177 | 7.4:+50388335 | MS.gene027373:CDS |
TTACCTGTGGGTGCAACTGG+AGG | 0.602916 | 7.4:-50388401 | None:intergenic |
CTTCGGGAACTTGCTAAAGT+GGG | 0.602929 | 7.4:+50387685 | MS.gene027373:CDS |
TATTTCCCATAAGAGAGGTA+TGG | 0.605924 | 7.4:+50386269 | MS.gene027373:CDS |
GATCCTCCAGTTGCACCCAC+AGG | 0.606455 | 7.4:+50388398 | MS.gene027373:CDS |
AAGTTTGGTATCAACAACAA+AGG | 0.612619 | 7.4:+50386206 | MS.gene027373:CDS |
TGTGGATGCGGTCCTAAATG+TGG | 0.617446 | 7.4:+50388964 | MS.gene027373:CDS |
AGCACTACACGAGCTAGTCT+AGG | 0.619841 | 7.4:-50389574 | None:intergenic |
AATGTTATTGTATGAAAACT+CGG | 0.621218 | 7.4:-50388730 | None:intergenic |
CATTCGACCACGATGTCTAG+AGG | 0.624366 | 7.4:-50388931 | None:intergenic |
TATAATATTTACAACAGCAG+CGG | 0.628158 | 7.4:+50386129 | MS.gene027373:CDS |
CAATAGTGTAGATGGAAGAG+AGG | 0.628379 | 7.4:+50389278 | MS.gene027373:CDS |
ATTGTAAAATGACCTCAAGT+CGG | 0.632516 | 7.4:-50389017 | None:intergenic |
GATGATATTTCCCATAAGAG+AGG | 0.634933 | 7.4:+50386264 | MS.gene027373:CDS |
TGAAGTTCCATCTAGTGCTG+CGG | 0.634941 | 7.4:+50388647 | MS.gene027373:CDS |
TTGTATCACACACCTTAGCA+AGG | 0.638217 | 7.4:-50386476 | None:intergenic |
AAACAGCTACAATGTCATTG+TGG | 0.648614 | 7.4:+50389866 | MS.gene027373:CDS |
AAGAGGAATACCTGATAGGG+AGG | 0.649275 | 7.4:-50389616 | None:intergenic |
CTTGAACTTGAATGACAGCG+AGG | 0.651390 | 7.4:-50386351 | None:intergenic |
GCTGCGGGATGCAATTGCAA+GGG | 0.655088 | 7.4:+50388663 | MS.gene027373:CDS |
AGGTTGGGCGGTAAGAACAT+GGG | 0.665196 | 7.4:+50389137 | MS.gene027373:CDS |
TACTCCCAAGAAAGGTTGGG+CGG | 0.669811 | 7.4:+50389125 | MS.gene027373:CDS |
GTCGAATGTGGACCGCAATG+TGG | 0.680163 | 7.4:+50388946 | MS.gene027373:CDS |
GGAAACAAAGTTTCTCAACA+GGG | 0.682009 | 7.4:+50388985 | MS.gene027373:CDS |
TTAGGACCGCATCCACATTG+CGG | 0.698881 | 7.4:-50388958 | None:intergenic |
GATGAGCTAGGAAGTGCCAA+CGG | 0.706121 | 7.4:+50389216 | MS.gene027373:CDS |
GATTGAGCCTCTAGACATCG+TGG | 0.722557 | 7.4:+50388924 | MS.gene027373:CDS |
GAGCTAGTCTAGGATCTCTG+TGG | 0.733830 | 7.4:-50389564 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATATGTATGAAATTT+AGG | + | chr7.4:50389332-50389351 | MS.gene027373:intron | 10.0% |
!! | GTAAAAATTTAATAAACAAT+TGG | + | chr7.4:50389763-50389782 | MS.gene027373:intron | 10.0% |
!! | TAAAATATGTATGAAATTTA+GGG | + | chr7.4:50389333-50389352 | MS.gene027373:intron | 10.0% |
!!! | GTTTTTTCATTTTTAAAAAA+GGG | - | chr7.4:50388453-50388472 | None:intergenic | 10.0% |
!!! | TAATATCTTATTAGAATTTT+GGG | + | chr7.4:50387980-50387999 | MS.gene027373:intron | 10.0% |
!!! | TAATTGATTTTATTAGTTTT+TGG | + | chr7.4:50387072-50387091 | MS.gene027373:intron | 10.0% |
!!! | TGTTTTTTCATTTTTAAAAA+AGG | - | chr7.4:50388454-50388473 | None:intergenic | 10.0% |
!!! | TTAATATCTTATTAGAATTT+TGG | + | chr7.4:50387979-50387998 | MS.gene027373:intron | 10.0% |
!! | AAACAATTTATCTGAAAAAA+GGG | + | chr7.4:50389423-50389442 | MS.gene027373:CDS | 15.0% |
!! | ATTGTATTTATACAATTATG+AGG | + | chr7.4:50386767-50386786 | MS.gene027373:intron | 15.0% |
!! | GAAAAAAAAAAAAGGAAAAA+GGG | - | chr7.4:50388497-50388516 | None:intergenic | 15.0% |
!! | GAAAATACAAAGAAAATTAT+TGG | - | chr7.4:50387373-50387392 | None:intergenic | 15.0% |
!! | GTAAAACAAAAAATATTAGA+TGG | + | chr7.4:50388420-50388439 | MS.gene027373:intron | 15.0% |
!! | TAAACAATTTATCTGAAAAA+AGG | + | chr7.4:50389422-50389441 | MS.gene027373:CDS | 15.0% |
!! | TTATTTAACATTAAGTCAAA+AGG | - | chr7.4:50387215-50387234 | None:intergenic | 15.0% |
!!! | ATTTAAAATCATGATATCAA+GGG | - | chr7.4:50387313-50387332 | None:intergenic | 15.0% |
!!! | GTTTTTTTTTTTAAACATGA+TGG | + | chr7.4:50389696-50389715 | MS.gene027373:intron | 15.0% |
!!! | TCATGATGTTTTAAAATTTT+AGG | + | chr7.4:50388585-50388604 | MS.gene027373:intron | 15.0% |
!!! | TTATTAAATTTTTACCATGA+AGG | - | chr7.4:50389758-50389777 | None:intergenic | 15.0% |
!!! | TTTTCAGATAAATTGTTTAT+AGG | - | chr7.4:50389421-50389440 | None:intergenic | 15.0% |
!! | AATGTTATTGTATGAAAACT+CGG | - | chr7.4:50388733-50388752 | None:intergenic | 20.0% |
!! | ACATAAATAATATGCAACAT+TGG | - | chr7.4:50386544-50386563 | None:intergenic | 20.0% |
!! | CGAAAAAAAAAAAAGGAAAA+AGG | - | chr7.4:50388498-50388517 | None:intergenic | 20.0% |
!! | TAAAGTTACTCCTAATAAAT+TGG | - | chr7.4:50387476-50387495 | None:intergenic | 20.0% |
!! | TCAACTAAGAAATTAACTAT+AGG | - | chr7.4:50387030-50387049 | None:intergenic | 20.0% |
!! | TCGTATTCTAATATTCAATT+TGG | + | chr7.4:50388152-50388171 | MS.gene027373:intron | 20.0% |
!! | TGTAGTAAGATGTATAAATA+TGG | + | chr7.4:50386707-50386726 | MS.gene027373:intron | 20.0% |
!! | TTACATATTACAAACATCAA+TGG | - | chr7.4:50389068-50389087 | None:intergenic | 20.0% |
!! | TTCTAATAAGATATTAAAGC+CGG | - | chr7.4:50387976-50387995 | None:intergenic | 20.0% |
!!! | AAAATTGAACAAAAGTACAA+AGG | - | chr7.4:50387829-50387848 | None:intergenic | 20.0% |
!!! | AATATTTTTTGTTTTACCTG+TGG | - | chr7.4:50388417-50388436 | None:intergenic | 20.0% |
!!! | ACATGTTTTATTTAAGGTTT+AGG | - | chr7.4:50387287-50387306 | None:intergenic | 20.0% |
!!! | AGACTATTTTCATCAATATA+TGG | - | chr7.4:50387541-50387560 | None:intergenic | 20.0% |
!!! | ATATTTTTTGTTTTACCTGT+GGG | - | chr7.4:50388416-50388435 | None:intergenic | 20.0% |
!!! | ATTTGTTTTTTTTCTTGTCA+GGG | + | chr7.4:50388776-50388795 | MS.gene027373:intron | 20.0% |
!!! | CATGTTTTATTTAAGGTTTA+GGG | - | chr7.4:50387286-50387305 | None:intergenic | 20.0% |
!!! | GAATATTGTTTCTTTTAGTT+TGG | + | chr7.4:50388313-50388332 | MS.gene027373:intron | 20.0% |
!!! | GATTTAAAATCATGATATCA+AGG | - | chr7.4:50387314-50387333 | None:intergenic | 20.0% |
!!! | GATTTTATTAGTTTTTGGTT+CGG | + | chr7.4:50387077-50387096 | MS.gene027373:intron | 20.0% |
! | AAGATGTATTAATATGGTTG+TGG | + | chr7.4:50387340-50387359 | MS.gene027373:intron | 25.0% |
! | AATATGTATGAAATTTAGGG+CGG | + | chr7.4:50389336-50389355 | MS.gene027373:intron | 25.0% |
! | AGTATCTGATAAATAAGCTT+CGG | + | chr7.4:50387668-50387687 | MS.gene027373:CDS | 25.0% |
! | ATCCAAAAGTAAAACAATAC+CGG | - | chr7.4:50388758-50388777 | None:intergenic | 25.0% |
! | ATTAGAATACGACATATAAG+TGG | - | chr7.4:50388144-50388163 | None:intergenic | 25.0% |
! | GATAAATTGTTTATAGGCAA+TGG | - | chr7.4:50389415-50389434 | None:intergenic | 25.0% |
! | GCTGTTAAGATGTATTAATA+TGG | + | chr7.4:50387334-50387353 | MS.gene027373:intron | 25.0% |
! | TATAATATTTACAACAGCAG+CGG | + | chr7.4:50386129-50386148 | MS.gene027373:CDS | 25.0% |
!! | ATTAACTTTCATTTTGTTGC+AGG | + | chr7.4:50387594-50387613 | MS.gene027373:intron | 25.0% |
!! | CGTATTAGTTTCTTTCTTTA+TGG | + | chr7.4:50386973-50386992 | MS.gene027373:intron | 25.0% |
!! | GAGTTTTCATACAATAACAT+TGG | + | chr7.4:50388732-50388751 | MS.gene027373:CDS | 25.0% |
!! | GGTATATTTTCTAACTTAAC+AGG | + | chr7.4:50389784-50389803 | MS.gene027373:intron | 25.0% |
!! | TTCAATCTTTTCATCATGTT+GGG | - | chr7.4:50386169-50386188 | None:intergenic | 25.0% |
!! | TTTAGGTTCATTTAATGGAA+GGG | + | chr7.4:50388176-50388195 | MS.gene027373:intron | 25.0% |
!! | TTTTATGATAACTTCCTTCA+TGG | + | chr7.4:50389741-50389760 | MS.gene027373:intron | 25.0% |
!!! | AAATCTCAAGTAATTTGCTT+TGG | - | chr7.4:50386882-50386901 | None:intergenic | 25.0% |
!!! | ATCTTATTAGAATTTTGGGT+TGG | + | chr7.4:50387984-50388003 | MS.gene027373:intron | 25.0% |
!!! | CTAATATTCAATTTGGCTTT+AGG | + | chr7.4:50388159-50388178 | MS.gene027373:intron | 25.0% |
!!! | GATTTGTTTTTTTTCTTGTC+AGG | + | chr7.4:50388775-50388794 | MS.gene027373:intron | 25.0% |
!!! | GGGAATACATGTTTTATTTA+AGG | - | chr7.4:50387293-50387312 | None:intergenic | 25.0% |
!!! | GGTTTGTTATTGCATATATA+TGG | + | chr7.4:50389717-50389736 | MS.gene027373:intron | 25.0% |
!!! | TCTTTGAAATTTTTCAGAGA+CGG | + | chr7.4:50389377-50389396 | MS.gene027373:intron | 25.0% |
AAGGAAAAAGGGACATATAT+TGG | - | chr7.4:50388486-50388505 | None:intergenic | 30.0% | |
AAGTTTGGTATCAACAACAA+AGG | + | chr7.4:50386206-50386225 | MS.gene027373:CDS | 30.0% | |
AGGTATTCCTCTTTGTAATA+AGG | + | chr7.4:50389626-50389645 | MS.gene027373:intron | 30.0% | |
ATTGTAAAATGACCTCAAGT+CGG | - | chr7.4:50389020-50389039 | None:intergenic | 30.0% | |
CATGATGAAAAGATTGAACT+TGG | + | chr7.4:50386171-50386190 | MS.gene027373:CDS | 30.0% | |
CATGCAGCGAAAAAAAAAAA+AGG | - | chr7.4:50388505-50388524 | None:intergenic | 30.0% | |
CTAAGATCCTTATTACAAAG+AGG | - | chr7.4:50389636-50389655 | None:intergenic | 30.0% | |
CTCTTTGTAATAAGGATCTT+AGG | + | chr7.4:50389634-50389653 | MS.gene027373:intron | 30.0% | |
CTTACAAAATCAGCTTGTAA+AGG | + | chr7.4:50388019-50388038 | MS.gene027373:intron | 30.0% | |
GAAGATATAATCATTTCCGT+TGG | - | chr7.4:50389235-50389254 | None:intergenic | 30.0% | |
GATTTCCAAACATCAATGAA+GGG | - | chr7.4:50386923-50386942 | None:intergenic | 30.0% | |
GTATCTGATAAATAAGCTTC+GGG | + | chr7.4:50387669-50387688 | MS.gene027373:CDS | 30.0% | |
GTTTCAAGATTTATCAACCA+TGG | + | chr7.4:50389502-50389521 | MS.gene027373:CDS | 30.0% | |
TAGAAAAAGTTTAGACGAGT+TGG | + | chr7.4:50386620-50386639 | MS.gene027373:intron | 30.0% | |
TATATCCCTTCATTGATGTT+TGG | + | chr7.4:50386915-50386934 | MS.gene027373:intron | 30.0% | |
TGATTTCCAAACATCAATGA+AGG | - | chr7.4:50386924-50386943 | None:intergenic | 30.0% | |
TGTTCTTGTGCTAATCATAA+TGG | + | chr7.4:50388705-50388724 | MS.gene027373:CDS | 30.0% | |
TTTCATACAATAACATTGGC+CGG | + | chr7.4:50388736-50388755 | MS.gene027373:CDS | 30.0% | |
TTTCTTGCTGCCAATTTATT+AGG | + | chr7.4:50387463-50387482 | MS.gene027373:intron | 30.0% | |
! | AAAATATTGCGACACTTTTG+AGG | + | chr7.4:50387175-50387194 | MS.gene027373:CDS | 30.0% |
! | AAATATTGCGACACTTTTGA+GGG | + | chr7.4:50387176-50387195 | MS.gene027373:CDS | 30.0% |
! | AAGAGATAAAGCCTTATCAT+GGG | - | chr7.4:50388068-50388087 | None:intergenic | 30.0% |
! | CTTTAGGTTCATTTAATGGA+AGG | + | chr7.4:50388175-50388194 | MS.gene027373:intron | 30.0% |
! | GAAACTTTGTTTCCACATTT+AGG | - | chr7.4:50388979-50388998 | None:intergenic | 30.0% |
! | GTTCAATCTTTTCATCATGT+TGG | - | chr7.4:50386170-50386189 | None:intergenic | 30.0% |
! | TGATCTTCATTTTCCTACTA+TGG | + | chr7.4:50387403-50387422 | MS.gene027373:intron | 30.0% |
! | TGCATGATGTCTTATTGAAT+GGG | + | chr7.4:50386856-50386875 | MS.gene027373:intron | 30.0% |
! | TTGCATGATGTCTTATTGAA+TGG | + | chr7.4:50386855-50386874 | MS.gene027373:intron | 30.0% |
!! | CTTTACAAGCTGATTTTGTA+AGG | - | chr7.4:50388021-50388040 | None:intergenic | 30.0% |
!! | GATTTGTTGATAACATACCT+TGG | - | chr7.4:50388229-50388248 | None:intergenic | 30.0% |
!! | TTGGCTTTAGGTTCATTTAA+TGG | + | chr7.4:50388171-50388190 | MS.gene027373:intron | 30.0% |
!!! | CTTTGATGGACTTGATTTTA+GGG | + | chr7.4:50386407-50386426 | MS.gene027373:CDS | 30.0% |
!!! | TCTTTGATGGACTTGATTTT+AGG | + | chr7.4:50386406-50386425 | MS.gene027373:CDS | 30.0% |
!!! | TTCTTTTAGTTTGGTATGCA+AGG | + | chr7.4:50388322-50388341 | MS.gene027373:intron | 30.0% |
!!! | TTTGATGGACTTGATTTTAG+GGG | + | chr7.4:50386408-50386427 | MS.gene027373:CDS | 30.0% |
AAACAGCTACAATGTCATTG+TGG | + | chr7.4:50389866-50389885 | MS.gene027373:CDS | 35.0% | |
AAACTACCTTTCTCTTACAC+AGG | + | chr7.4:50389095-50389114 | MS.gene027373:intron | 35.0% | |
AAACTCTTTCTTCTTCTCCA+AGG | + | chr7.4:50388209-50388228 | MS.gene027373:CDS | 35.0% | |
AAACTTCAAATGTCCAGTCA+TGG | - | chr7.4:50387903-50387922 | None:intergenic | 35.0% | |
ACAAAGAGGAATACCTGATA+GGG | - | chr7.4:50389622-50389641 | None:intergenic | 35.0% | |
ACAATGTCATTGTGGTTCAA+AGG | + | chr7.4:50389874-50389893 | MS.gene027373:CDS | 35.0% | |
ACACATTGTACAAAGAGGTT+TGG | - | chr7.4:50389535-50389554 | None:intergenic | 35.0% | |
AGAATGTGTGACAATTTCCA+TGG | - | chr7.4:50386663-50386682 | None:intergenic | 35.0% | |
ATTAGCACAAGAACATCGTT+TGG | - | chr7.4:50388700-50388719 | None:intergenic | 35.0% | |
CACACAATCAATAGTGTAGA+TGG | + | chr7.4:50389270-50389289 | MS.gene027373:CDS | 35.0% | |
CTCATCAAACATACCATAGT+AGG | - | chr7.4:50387419-50387438 | None:intergenic | 35.0% | |
CTCTTATGGGAAATATCATC+TGG | - | chr7.4:50386264-50386283 | None:intergenic | 35.0% | |
GATAAACCTGTGTAAGAGAA+AGG | - | chr7.4:50389104-50389123 | None:intergenic | 35.0% | |
GATGATATTTCCCATAAGAG+AGG | + | chr7.4:50386264-50386283 | MS.gene027373:CDS | 35.0% | |
GATTGAACTTGGAAGTAAAG+AGG | + | chr7.4:50386182-50386201 | MS.gene027373:CDS | 35.0% | |
GCAGCAAGAAATTGACTAAT+TGG | - | chr7.4:50387454-50387473 | None:intergenic | 35.0% | |
GGAAACAAAGTTTCTCAACA+GGG | + | chr7.4:50388985-50389004 | MS.gene027373:CDS | 35.0% | |
GTTTGCTCACAACTTCAAAA+TGG | + | chr7.4:50386228-50386247 | MS.gene027373:CDS | 35.0% | |
TACAAAGAGGAATACCTGAT+AGG | - | chr7.4:50389623-50389642 | None:intergenic | 35.0% | |
TACTACCAGATTTCCACTAT+CGG | - | chr7.4:50387929-50387948 | None:intergenic | 35.0% | |
TATCATGGGTTTATAGGTGA+GGG | - | chr7.4:50388054-50388073 | None:intergenic | 35.0% | |
TATTTCCCATAAGAGAGGTA+TGG | + | chr7.4:50386269-50386288 | MS.gene027373:CDS | 35.0% | |
TCACCTATAAACCCATGATA+AGG | + | chr7.4:50388054-50388073 | MS.gene027373:intron | 35.0% | |
TGAAAAAAGGGACGAGTTAA+TGG | + | chr7.4:50389435-50389454 | MS.gene027373:CDS | 35.0% | |
TGAGAACACATTGTACAAAG+AGG | - | chr7.4:50389540-50389559 | None:intergenic | 35.0% | |
TGGAAACAAAGTTTCTCAAC+AGG | + | chr7.4:50388984-50389003 | MS.gene027373:CDS | 35.0% | |
TGGAAGTAAAGAGGAAAGTT+TGG | + | chr7.4:50386191-50386210 | MS.gene027373:CDS | 35.0% | |
TGGAGGATCATCAAAATCAT+TGG | - | chr7.4:50388387-50388406 | None:intergenic | 35.0% | |
TTATCATGGGTTTATAGGTG+AGG | - | chr7.4:50388055-50388074 | None:intergenic | 35.0% | |
TTGTTGCAGGTAGAGAAAAA+TGG | + | chr7.4:50387607-50387626 | MS.gene027373:intron | 35.0% | |
! | AAGCCTTATCATGGGTTTAT+AGG | - | chr7.4:50388060-50388079 | None:intergenic | 35.0% |
! | AGGTTTAGGGTTTAAGCATT+AGG | - | chr7.4:50387273-50387292 | None:intergenic | 35.0% |
! | CTCATTTTCAGAACTCTTAG+TGG | - | chr7.4:50386052-50386071 | None:intergenic | 35.0% |
! | GAAGAGATAAAGCCTTATCA+TGG | - | chr7.4:50388069-50388088 | None:intergenic | 35.0% |
! | GGTTTAGGGTTTAAGCATTA+GGG | - | chr7.4:50387272-50387291 | None:intergenic | 35.0% |
! | TGTCATTCAAGTTCAAGAAG+TGG | + | chr7.4:50386357-50386376 | MS.gene027373:CDS | 35.0% |
! | TTCTGAAAATGAGGCTATGA+TGG | + | chr7.4:50386059-50386078 | MS.gene027373:CDS | 35.0% |
!! | ATTGATAACGAATACGTTCC+TGG | + | chr7.4:50387631-50387650 | MS.gene027373:CDS | 35.0% |
!! | CAAGCTGATTTTGTAAGGTT+TGG | - | chr7.4:50388016-50388035 | None:intergenic | 35.0% |
!! | CACTAAGAGTTCTGAAAATG+AGG | + | chr7.4:50386050-50386069 | MS.gene027373:CDS | 35.0% |
!! | GAAATTTTTCAGAGACGGTT+GGG | + | chr7.4:50389382-50389401 | MS.gene027373:intron | 35.0% |
!! | TGAAATTTTTCAGAGACGGT+TGG | + | chr7.4:50389381-50389400 | MS.gene027373:intron | 35.0% |
!! | TTTTCGCTGCATGCTTTATT+TGG | + | chr7.4:50388512-50388531 | MS.gene027373:intron | 35.0% |
AAAATCAGCTTGTAAAGGCG+AGG | + | chr7.4:50388024-50388043 | MS.gene027373:intron | 40.0% | |
AACTGACCATACCTCTCTTA+TGG | - | chr7.4:50386278-50386297 | None:intergenic | 40.0% | |
AAGCCTAGATGTTTCTCTCA+AGG | - | chr7.4:50386442-50386461 | None:intergenic | 40.0% | |
ACACCAATATACTCGACAAC+TGG | - | chr7.4:50389183-50389202 | None:intergenic | 40.0% | |
ACTACCAGATTTCCACTATC+GGG | - | chr7.4:50387928-50387947 | None:intergenic | 40.0% | |
ACTGACCATACCTCTCTTAT+GGG | - | chr7.4:50386277-50386296 | None:intergenic | 40.0% | |
AGTCCATCAAAGACGAACAT+TGG | - | chr7.4:50386399-50386418 | None:intergenic | 40.0% | |
AGTCTTGAACTCACTCTTGT+TGG | - | chr7.4:50386087-50386106 | None:intergenic | 40.0% | |
AGTGAGCCGATAGTGAATAT+TGG | + | chr7.4:50387949-50387968 | MS.gene027373:intron | 40.0% | |
CAATAGTGTAGATGGAAGAG+AGG | + | chr7.4:50389278-50389297 | MS.gene027373:CDS | 40.0% | |
CAGGAACTCACATATGACTA+TGG | + | chr7.4:50389803-50389822 | MS.gene027373:intron | 40.0% | |
CCAGCATCTATGCAATATTC+AGG | - | chr7.4:50389469-50389488 | None:intergenic | 40.0% | |
CCTGAATATTGCATAGATGC+TGG | + | chr7.4:50389466-50389485 | MS.gene027373:CDS | 40.0% | |
CTAGATGGAACTTCAATGCT+TGG | - | chr7.4:50388642-50388661 | None:intergenic | 40.0% | |
GTAACAACATCATTTGCAGC+AGG | + | chr7.4:50387113-50387132 | MS.gene027373:intron | 40.0% | |
GTATGCAAGGACATTAGCAA+TGG | + | chr7.4:50388335-50388354 | MS.gene027373:CDS | 40.0% | |
GTTTATCGTACTCCCAAGAA+AGG | + | chr7.4:50389117-50389136 | MS.gene027373:CDS | 40.0% | |
TACTTCGAAGTAGTGATTCC+AGG | - | chr7.4:50387652-50387671 | None:intergenic | 40.0% | |
TCTTCTCAAAGAGTTGAGCT+TGG | - | chr7.4:50386328-50386347 | None:intergenic | 40.0% | |
TGCTAAAGTGGGAACATACA+AGG | + | chr7.4:50387696-50387715 | MS.gene027373:CDS | 40.0% | |
TGTCCTTGAGAGAAACATCT+AGG | + | chr7.4:50386436-50386455 | MS.gene027373:CDS | 40.0% | |
TTGTATCACACACCTTAGCA+AGG | - | chr7.4:50386479-50386498 | None:intergenic | 40.0% | |
! | CGAGTTGGATTTCAGACTTT+CGG | + | chr7.4:50386635-50386654 | MS.gene027373:intron | 40.0% |
! | TTTGAAGTTTGACCCGATAG+TGG | + | chr7.4:50387913-50387932 | MS.gene027373:intron | 40.0% |
!! | GGCCGGTATTGTTTTACTTT+TGG | + | chr7.4:50388753-50388772 | MS.gene027373:intron | 40.0% |
!!! | TGCATAGATGCTGGTTCTTT+TGG | + | chr7.4:50389475-50389494 | MS.gene027373:CDS | 40.0% |
AAGAGGAATACCTGATAGGG+AGG | - | chr7.4:50389619-50389638 | None:intergenic | 45.0% | |
ACATGGGACTTTATCCCATC+AGG | + | chr7.4:50389153-50389172 | MS.gene027373:CDS | 45.0% | |
AGAAGACATACCTCCCTATC+AGG | + | chr7.4:50389606-50389625 | MS.gene027373:CDS | 45.0% | |
AGCGAGAATCGACACAAGAT+AGG | + | chr7.4:50387150-50387169 | MS.gene027373:CDS | 45.0% | |
ATCGTACTCCCAAGAAAGGT+TGG | + | chr7.4:50389121-50389140 | MS.gene027373:CDS | 45.0% | |
ATTTCAGACTTTCGGAGCCA+TGG | + | chr7.4:50386643-50386662 | MS.gene027373:intron | 45.0% | |
CAATCTTCGTCTCCTTGCTA+AGG | + | chr7.4:50386464-50386483 | MS.gene027373:CDS | 45.0% | |
CGAGTTGTATCATGCAGCTA+GGG | - | chr7.4:50387516-50387535 | None:intergenic | 45.0% | |
CGTCCAATGTTCGTCTTTGA+TGG | + | chr7.4:50386393-50386412 | MS.gene027373:CDS | 45.0% | |
CTAAGTAGAGACGATGAGCT+AGG | + | chr7.4:50389204-50389223 | MS.gene027373:CDS | 45.0% | |
CTTAGCAAGGAGACGAAGAT+TGG | - | chr7.4:50386466-50386485 | None:intergenic | 45.0% | |
CTTGAACTTGAATGACAGCG+AGG | - | chr7.4:50386354-50386373 | None:intergenic | 45.0% | |
GCACCAGTTGTCGAGTATAT+TGG | + | chr7.4:50389177-50389196 | MS.gene027373:CDS | 45.0% | |
GCCGATAGTGAATATTGGAC+CGG | + | chr7.4:50387954-50387973 | MS.gene027373:intron | 45.0% | |
GCCGGTCCAATATTCACTAT+CGG | - | chr7.4:50387958-50387977 | None:intergenic | 45.0% | |
GCGAGAATCGACACAAGATA+GGG | + | chr7.4:50387151-50387170 | MS.gene027373:CDS | 45.0% | |
GGGTTTAAGCATTAGGGCTA+AGG | - | chr7.4:50387266-50387285 | None:intergenic | 45.0% | |
TACACACTCGATAGTGTGTC+TGG | + | chr7.4:50389827-50389846 | MS.gene027373:CDS | 45.0% | |
TCGTACTCCCAAGAAAGGTT+GGG | + | chr7.4:50389122-50389141 | MS.gene027373:CDS | 45.0% | |
TGAAGTTCCATCTAGTGCTG+CGG | + | chr7.4:50388647-50388666 | MS.gene027373:CDS | 45.0% | |
!! | CTTCGGGAACTTGCTAAAGT+GGG | + | chr7.4:50387685-50387704 | MS.gene027373:CDS | 45.0% |
!! | GATAGTGTGTCTGGTTCTGA+TGG | + | chr7.4:50389836-50389855 | MS.gene027373:CDS | 45.0% |
!! | TTGACCCGATAGTGGAAATC+TGG | + | chr7.4:50387921-50387940 | MS.gene027373:intron | 45.0% |
AAGGTTGGGCGGTAAGAACA+TGG | + | chr7.4:50389136-50389155 | MS.gene027373:CDS | 50.0% | |
AGGTTGGGCGGTAAGAACAT+GGG | + | chr7.4:50389137-50389156 | MS.gene027373:CDS | 50.0% | |
CATTCGACCACGATGTCTAG+AGG | - | chr7.4:50388934-50388953 | None:intergenic | 50.0% | |
CTAGACATCGTGGTCGAATG+TGG | + | chr7.4:50388934-50388953 | MS.gene027373:CDS | 50.0% | |
CTTACCGCCCAACCTTTCTT+GGG | - | chr7.4:50389132-50389151 | None:intergenic | 50.0% | |
GAAGTTCCATCTAGTGCTGC+GGG | + | chr7.4:50388648-50388667 | MS.gene027373:CDS | 50.0% | |
GATTGAGCCTCTAGACATCG+TGG | + | chr7.4:50388924-50388943 | MS.gene027373:CDS | 50.0% | |
GCGAGTTGTATCATGCAGCT+AGG | - | chr7.4:50387517-50387536 | None:intergenic | 50.0% | |
TACTCCCAAGAAAGGTTGGG+CGG | + | chr7.4:50389125-50389144 | MS.gene027373:CDS | 50.0% | |
TCTTACCGCCCAACCTTTCT+TGG | - | chr7.4:50389133-50389152 | None:intergenic | 50.0% | |
TGTGGATGCGGTCCTAAATG+TGG | + | chr7.4:50388964-50388983 | MS.gene027373:CDS | 50.0% | |
TTAGGACCGCATCCACATTG+CGG | - | chr7.4:50388961-50388980 | None:intergenic | 50.0% | |
! | AGAGGTTTGGCTCACATCCA+TGG | - | chr7.4:50389522-50389541 | None:intergenic | 50.0% |
! | AGCACTACACGAGCTAGTCT+AGG | - | chr7.4:50389577-50389596 | None:intergenic | 50.0% |
! | GAGCTAGTCTAGGATCTCTG+TGG | - | chr7.4:50389567-50389586 | None:intergenic | 50.0% |
! | GTTTTACCTGTGGGTGCAAC+TGG | - | chr7.4:50388407-50388426 | None:intergenic | 50.0% |
!! | GATGAGCTAGGAAGTGCCAA+CGG | + | chr7.4:50389216-50389235 | MS.gene027373:CDS | 50.0% |
!! | GCTTCGGGAACTTGCTAAAG+TGG | + | chr7.4:50387684-50387703 | MS.gene027373:CDS | 50.0% |
!! | GGGCTTAAGTTACCGACTTG+AGG | + | chr7.4:50389005-50389024 | MS.gene027373:CDS | 50.0% |
CACTCTCTCACGTCCATGAC+TGG | + | chr7.4:50387887-50387906 | MS.gene027373:intron | 55.0% | |
CGACAACTGGTGCACCTGAT+GGG | - | chr7.4:50389170-50389189 | None:intergenic | 55.0% | |
GCTGCGGGATGCAATTGCAA+GGG | + | chr7.4:50388663-50388682 | MS.gene027373:CDS | 55.0% | |
GTCGAATGTGGACCGCAATG+TGG | + | chr7.4:50388946-50388965 | MS.gene027373:CDS | 55.0% | |
TCGACAACTGGTGCACCTGA+TGG | - | chr7.4:50389171-50389190 | None:intergenic | 55.0% | |
TGCTGCGGGATGCAATTGCA+AGG | + | chr7.4:50388662-50388681 | MS.gene027373:CDS | 55.0% | |
TGTGGACCGCAATGTGGATG+CGG | + | chr7.4:50388952-50388971 | MS.gene027373:CDS | 55.0% | |
TTACCTGTGGGTGCAACTGG+AGG | - | chr7.4:50388404-50388423 | None:intergenic | 55.0% | |
TTGCATCCCGCAGCACTAGA+TGG | - | chr7.4:50388657-50388676 | None:intergenic | 55.0% | |
GATCCTCCAGTTGCACCCAC+AGG | + | chr7.4:50388398-50388417 | MS.gene027373:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 50386042 | 50389919 | 50386042 | ID=MS.gene027373 |
chr7.4 | mRNA | 50386042 | 50389919 | 50386042 | ID=MS.gene027373.t1;Parent=MS.gene027373 |
chr7.4 | exon | 50386042 | 50386485 | 50386042 | ID=MS.gene027373.t1.exon1;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50386042 | 50386485 | 50386042 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50387132 | 50387206 | 50387132 | ID=MS.gene027373.t1.exon2;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50387132 | 50387206 | 50387132 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50387616 | 50387717 | 50387616 | ID=MS.gene027373.t1.exon3;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50387616 | 50387717 | 50387616 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50388181 | 50388230 | 50388181 | ID=MS.gene027373.t1.exon4;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50388181 | 50388230 | 50388181 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50388331 | 50388419 | 50388331 | ID=MS.gene027373.t1.exon5;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50388331 | 50388419 | 50388331 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50388607 | 50388757 | 50388607 | ID=MS.gene027373.t1.exon6;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50388607 | 50388757 | 50388607 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50388921 | 50389026 | 50388921 | ID=MS.gene027373.t1.exon7;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50388921 | 50389026 | 50388921 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50389117 | 50389299 | 50389117 | ID=MS.gene027373.t1.exon8;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50389117 | 50389299 | 50389117 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50389394 | 50389627 | 50389394 | ID=MS.gene027373.t1.exon9;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50389394 | 50389627 | 50389394 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
chr7.4 | exon | 50389806 | 50389919 | 50389806 | ID=MS.gene027373.t1.exon10;Parent=MS.gene027373.t1 |
chr7.4 | CDS | 50389806 | 50389919 | 50389806 | ID=cds.MS.gene027373.t1;Parent=MS.gene027373.t1 |
Gene Sequence |
Protein sequence |