AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027374

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027374.t1 MTR_7g052480 84.875 562 33 5 1 516 1 556 0.0 942
MS.gene027374.t1 MTR_7g084090 56.380 337 142 4 184 516 422 757 1.98e-124 382
MS.gene027374.t1 MTR_6g061270 56.083 337 143 4 184 516 359 694 3.95e-122 374
MS.gene027374.t1 MTR_6g061200 52.226 337 127 5 184 516 359 665 1.75e-107 335
MS.gene027374.t1 MTR_5g013420 38.636 396 207 10 129 516 722 1089 1.98e-70 244
MS.gene027374.t1 MTR_5g013420 38.384 396 208 10 129 516 722 1089 2.87e-69 240
MS.gene027374.t1 MTR_4g010830 41.528 301 148 7 226 516 698 980 4.57e-65 228
MS.gene027374.t1 MTR_7g084090 49.550 222 107 4 184 401 422 642 3.30e-62 215
MS.gene027374.t1 MTR_4g010550 39.262 298 141 8 227 516 199 464 4.32e-57 197
MS.gene027374.t1 MTR_7g088370 30.330 333 200 7 186 512 395 701 5.67e-45 168
MS.gene027374.t1 MTR_7g445710 33.663 303 155 10 226 516 275 543 1.54e-42 159
MS.gene027374.t1 MTR_8g042750 33.788 293 181 8 226 512 399 684 6.35e-41 157
MS.gene027374.t1 MTR_3g011440 33.446 296 181 7 226 512 372 660 1.10e-40 155
MS.gene027374.t1 MTR_8g070075 32.026 306 191 9 186 486 456 749 1.14e-40 156
MS.gene027374.t1 MTR_8g070070 33.550 307 185 10 186 486 463 756 1.62e-40 156
MS.gene027374.t1 MTR_8g071030 35.632 261 153 7 230 486 487 736 4.19e-39 152
MS.gene027374.t1 MTR_1g035420 31.833 311 199 7 186 493 352 652 4.98e-39 151
MS.gene027374.t1 MTR_7g450730 32.414 290 144 7 229 516 266 505 5.29e-39 149
MS.gene027374.t1 MTR_1g035400 31.290 310 200 7 186 492 271 570 9.51e-39 149
MS.gene027374.t1 MTR_0376s0030 30.645 310 194 9 186 486 264 561 1.36e-35 140
MS.gene027374.t1 MTR_1g048950 33.227 313 161 10 211 516 262 533 4.96e-35 138
MS.gene027374.t1 MTR_8g078490 30.347 346 169 13 211 516 940 1253 3.80e-33 135
MS.gene027374.t1 MTR_7g445530 31.985 272 139 10 226 485 275 512 4.50e-31 126
MS.gene027374.t1 MTR_1g069570 31.085 341 149 14 230 512 430 742 5.12e-31 127
MS.gene027374.t1 MTR_6g044690 28.391 317 196 12 184 486 264 563 6.18e-31 126
MS.gene027374.t1 MTR_4g132610 35.294 221 118 5 297 516 851 1047 3.19e-28 119
MS.gene027374.t1 MTR_5g018850 29.819 332 161 11 226 516 1207 1507 8.40e-28 119
MS.gene027374.t1 MTR_1g080340 30.058 346 153 14 229 514 268 584 1.81e-27 116
MS.gene027374.t1 MTR_6g043960 29.259 270 170 9 226 486 224 481 2.10e-27 115
MS.gene027374.t1 MTR_8g078505 35.897 195 97 3 298 487 346 517 1.45e-26 113
MS.gene027374.t1 MTR_7g098390 28.274 336 163 12 230 512 388 698 8.11e-24 105
MS.gene027374.t1 MTR_2g054460 28.696 230 144 5 259 486 252 463 1.32e-23 103
MS.gene027374.t1 MTR_7g445600 32.692 156 62 1 330 485 243 355 9.15e-22 97.1
MS.gene027374.t1 MTR_1g069570 30.147 272 108 12 230 444 430 676 1.26e-19 92.8
MS.gene027374.t1 MTR_1g012890 28.249 177 93 5 339 515 225 367 1.39e-11 66.6
MS.gene027374.t1 MTR_1g064770 45.614 57 30 1 313 368 31 87 4.89e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027374.t1 AT5G13960 54.896 337 146 5 184 516 156 490 3.03e-125 375
MS.gene027374.t1 AT5G13960 54.896 337 146 5 184 516 290 624 1.40e-124 378
MS.gene027374.t1 AT2G22740 40.064 312 163 9 215 516 493 790 1.80e-56 202
MS.gene027374.t1 AT2G22740 40.064 312 163 9 215 516 493 790 1.80e-56 202
MS.gene027374.t1 AT2G35160 38.062 289 140 8 230 516 507 758 2.63e-55 198
MS.gene027374.t1 AT2G35160 38.062 289 140 8 230 516 543 794 4.35e-55 198
MS.gene027374.t1 AT2G35160 38.062 289 140 8 230 516 543 794 4.35e-55 198
MS.gene027374.t1 AT2G35160 38.062 289 140 8 230 516 543 794 4.35e-55 198
MS.gene027374.t1 AT2G35160 38.062 289 140 8 230 516 543 794 4.35e-55 198
MS.gene027374.t1 AT1G73100 30.334 389 249 9 129 512 294 665 7.99e-46 170
MS.gene027374.t1 AT2G33290 35.689 283 160 8 215 486 367 638 1.61e-41 158
MS.gene027374.t1 AT2G33290 35.689 283 160 8 215 486 367 638 1.61e-41 158
MS.gene027374.t1 AT2G33290 35.689 283 160 8 215 486 367 638 1.61e-41 158
MS.gene027374.t1 AT2G33290 35.689 283 160 8 215 486 367 638 1.61e-41 158
MS.gene027374.t1 AT4G13460 32.476 311 193 10 186 490 342 641 4.97e-41 157
MS.gene027374.t1 AT4G13460 32.476 311 193 10 186 490 342 641 4.97e-41 157
MS.gene027374.t1 AT5G04940 32.215 298 188 7 220 512 378 666 1.58e-40 155
MS.gene027374.t1 AT5G04940 32.215 298 188 7 220 512 378 666 1.58e-40 155
MS.gene027374.t1 AT1G17770 29.909 331 209 10 193 512 371 689 3.72e-34 137
MS.gene027374.t1 AT2G23740 32.143 336 170 13 211 515 1073 1381 4.81e-32 131
MS.gene027374.t1 AT2G23740 32.143 336 170 13 211 515 1073 1381 4.81e-32 131
MS.gene027374.t1 AT2G23740 32.143 336 170 13 211 515 1073 1381 4.81e-32 131
MS.gene027374.t1 AT2G23740 32.143 336 170 13 211 515 1066 1374 5.11e-32 131
MS.gene027374.t1 AT3G04380 28.235 340 164 11 230 514 146 460 1.21e-25 110
MS.gene027374.t1 AT3G04380 28.235 340 164 11 230 514 119 433 1.35e-25 110
MS.gene027374.t1 AT3G04380 28.235 340 164 11 230 514 119 433 1.37e-25 110
MS.gene027374.t1 AT3G04380 28.235 340 164 11 230 514 146 460 1.42e-25 110
MS.gene027374.t1 AT3G04380 28.235 340 164 11 230 514 130 444 1.47e-25 110
MS.gene027374.t1 AT3G04380 28.235 340 164 11 230 514 103 417 1.74e-25 109
MS.gene027374.t1 AT2G24740 27.964 329 212 11 191 512 441 751 8.34e-25 108
MS.gene027374.t1 AT1G04050 32.524 206 109 6 313 514 438 617 1.61e-24 107
MS.gene027374.t1 AT1G04050 32.524 206 109 6 313 514 542 721 1.69e-24 108
MS.gene027374.t1 AT1G04050 32.524 206 109 6 313 514 542 721 1.69e-24 108
MS.gene027374.t1 AT2G23740 32.075 265 126 12 211 444 1073 1314 2.02e-21 99.0
MS.gene027374.t1 AT2G23740 32.075 265 126 12 211 444 1073 1314 2.02e-21 99.0
MS.gene027374.t1 AT3G03750 31.120 241 124 8 275 511 143 345 1.35e-20 93.6
MS.gene027374.t1 AT4G30860 27.723 202 104 6 314 515 305 464 1.93e-11 66.6

Find 105 sgRNAs with CRISPR-Local

Find 273 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTTGATGGACTTGACTTT+AGG 0.192680 7.4:+50401364 MS.gene027374:CDS
TGCATAGATGCTGGTTCTTT+TGG 0.193774 7.4:+50404443 MS.gene027374:CDS
CGTCCAATGTTCGTCTTTGA+TGG 0.216021 7.4:+50401351 MS.gene027374:CDS
AACTGACCATACCTCTCTTA+TGG 0.257716 7.4:-50401233 None:intergenic
TTGGCTTTAGGTTCATTTAA+TGG 0.273794 7.4:+50403144 MS.gene027374:intron
GTTTGCTCACAACTTCAAAA+TGG 0.284170 7.4:+50401186 MS.gene027374:CDS
TCTTACCGCCCAACCTTTCT+TGG 0.287241 7.4:-50404099 None:intergenic
GAAACTTTGTTTCCACATTT+AGG 0.290820 7.4:-50403945 None:intergenic
CTTTGATGGACTTGACTTTA+GGG 0.301083 7.4:+50401365 MS.gene027374:CDS
CAGGAACTCACCTATGACTA+TGG 0.342829 7.4:+50405490 MS.gene027374:intron
ACTGACCATACCTCTCTTAT+GGG 0.344917 7.4:-50401232 None:intergenic
TGGAAGTAAAGAGGAAAGTT+TGG 0.346273 7.4:+50401149 MS.gene027374:CDS
CCAGCATCTATGCAATATTC+AGG 0.354345 7.4:-50404434 None:intergenic
AGAAGACATACCTCCCTATC+AGG 0.387240 7.4:+50404574 MS.gene027374:CDS
AGCAAGAATCGACACAAGAT+AGG 0.395673 7.4:+50402108 MS.gene027374:CDS
CACACAATCAATGGTGTAGA+TGG 0.399488 7.4:+50404239 MS.gene027374:CDS
GCACCAGTTGTCGAGTATAT+TGG 0.400887 7.4:+50404146 MS.gene027374:CDS
ATTGATAACGAATACGTTCC+TGG 0.401461 7.4:+50402327 MS.gene027374:CDS
TGGAAACAAAGTTTCTCAAC+AGG 0.404546 7.4:+50403953 MS.gene027374:CDS
AGTATCTGATAAATAAGCTT+CGG 0.405640 7.4:+50402364 MS.gene027374:CDS
CATGTTGAAAAGATTGAACT+TGG 0.416250 7.4:+50401129 MS.gene027374:CDS
GTATCTGATAAATAAGCTTC+GGG 0.422102 7.4:+50402365 MS.gene027374:CDS
CTTACCGCCCAACCTTTCTT+GGG 0.422197 7.4:-50404098 None:intergenic
TGTCCTTGTGCTAGTCATAA+TGG 0.433090 7.4:+50403676 MS.gene027374:CDS
TGTCCTTGAGAGAAACATCT+AGG 0.434783 7.4:+50401394 MS.gene027374:CDS
ACACATTGTACAAAGAGGTT+TGG 0.447308 7.4:-50404500 None:intergenic
TTTCATACAATAACATTGGC+AGG 0.452872 7.4:+50403707 MS.gene027374:CDS
TTCTTTAAGTTTGGTATGCA+AGG 0.458357 7.4:+50403295 MS.gene027374:intron
ATCGTACTCCCAAGAAAGGT+TGG 0.459933 7.4:+50404090 MS.gene027374:CDS
TACAAAGAGGAATACCTGAT+AGG 0.463396 7.4:-50404588 None:intergenic
TGGAGGATCATCAAAATCAT+TGG 0.466153 7.4:-50403357 None:intergenic
TTCTGAAAATGAGGCTATGA+TGG 0.472623 7.4:+50401017 MS.gene027374:CDS
GATAAATTGCTTATAGGCAA+TGG 0.479915 7.4:-50404380 None:intergenic
GATTGTTTGCACACAATCAA+TGG 0.481537 7.4:+50404230 MS.gene027374:CDS
ACACCAATATACTCGACAAC+TGG 0.483092 7.4:-50404149 None:intergenic
AGTCTTGAACTCACTCTTGT+TGG 0.483801 7.4:-50401042 None:intergenic
TCTTCTCAAAGAGTTGAGCT+TGG 0.484140 7.4:-50401283 None:intergenic
ACATGGGACTTTATCCCATC+AGG 0.487648 7.4:+50404122 MS.gene027374:CDS
GAGTGTGTAACCATAGTCAT+AGG 0.489551 7.4:-50405500 None:intergenic
ACAAAGAGGAATACCTGATA+GGG 0.490411 7.4:-50404587 None:intergenic
GCTTCGGGAACTTGCTAAAG+TGG 0.493084 7.4:+50402380 MS.gene027374:CDS
CTTAGCAAGGAGACGAAGAT+TGG 0.494551 7.4:-50401421 None:intergenic
TCGTACTCCCAAGAAAGGTT+GGG 0.500282 7.4:+50404091 MS.gene027374:CDS
CAAGATGGAACTTCAATGCT+TGG 0.503345 7.4:-50403610 None:intergenic
AGAGGTTTGGTTCACATCCA+TGG 0.504457 7.4:-50404487 None:intergenic
CGACAACTGGTGCACCTGAT+GGG 0.509774 7.4:-50404136 None:intergenic
TACTTCGAAGTAGTGATTCC+AGG 0.513375 7.4:-50402345 None:intergenic
GTTTCAAGATTTATCAACCA+TGG 0.515474 7.4:+50404470 MS.gene027374:CDS
GTTTATCGTACTCCCAAGAA+AGG 0.517387 7.4:+50404086 MS.gene027374:CDS
TCGACAACTGGTGCACCTGA+TGG 0.518260 7.4:-50404137 None:intergenic
CAATCTTCGTCTCCTTGCTA+AGG 0.519599 7.4:+50401422 MS.gene027374:CDS
AAACTCTTTCTTCTTCTCCA+AGG 0.531848 7.4:+50403182 MS.gene027374:CDS
TGCTAAAGTGGGAACATACA+AGG 0.533120 7.4:+50402392 MS.gene027374:CDS
CCTGAATATTGCATAGATGC+TGG 0.535805 7.4:+50404434 MS.gene027374:CDS
GAAGTTCCATCTTGTGCTGC+GGG 0.536550 7.4:+50403619 MS.gene027374:CDS
CTAAGTAGAGACGATGAGCT+AGG 0.538306 7.4:+50404173 MS.gene027374:CDS
TTTAGGTTCATTTAATGGAA+GGG 0.538367 7.4:+50403149 MS.gene027374:intron
CTTTAGGTTCATTTAATGGA+AGG 0.538474 7.4:+50403148 MS.gene027374:intron
CACTAAGAGTTCTGAAAATG+AGG 0.540450 7.4:+50401008 MS.gene027374:CDS
CTAGACATCGTGGTCGAATG+TGG 0.546755 7.4:+50403903 MS.gene027374:CDS
GATTGAACTTGGAAGTAAAG+AGG 0.553834 7.4:+50401140 MS.gene027374:CDS
AAGGTTGGGCGGTAAGAACA+TGG 0.558115 7.4:+50404105 MS.gene027374:CDS
ACTAGCACAAGGACATCTCT+TGG 0.560065 7.4:-50403668 None:intergenic
GCAAGAATCGACACAAGATA+GGG 0.566361 7.4:+50402109 MS.gene027374:CDS
GGGCTTAACTTACCGACTTG+AGG 0.566843 7.4:+50403974 MS.gene027374:CDS
TTGCATCCCGCAGCACAAGA+TGG 0.569111 7.4:-50403625 None:intergenic
TGAAGTTCCATCTTGTGCTG+CGG 0.569457 7.4:+50403618 MS.gene027374:CDS
AAGCCTAGATGTTTCTCTCA+AGG 0.570477 7.4:-50401397 None:intergenic
TGTCATTCAAGTTCAAGAAG+TGG 0.578513 7.4:+50401315 MS.gene027374:CDS
AGTCCATCAAAGACGAACAT+TGG 0.579758 7.4:-50401354 None:intergenic
TGAGAACACATTGTACAAAG+AGG 0.579762 7.4:-50404505 None:intergenic
GATAGTGTGTCTGATTCTGA+TGG 0.580918 7.4:+50405523 MS.gene027374:CDS
GAAGATATAATCATTTCCGT+TGG 0.584617 7.4:-50404201 None:intergenic
TGTGGACCGCAATGTGGATG+CGG 0.589925 7.4:+50403921 MS.gene027374:CDS
TCAATGTCATTGTGGTGCAA+AGG 0.596456 7.4:+50405561 MS.gene027374:CDS
GTATGCAAGGACATTAGCAA+TGG 0.598177 7.4:+50403308 MS.gene027374:CDS
AATGTTATTGTATGAAAACT+CGG 0.598679 7.4:-50403701 None:intergenic
TTACCTGTGGGTGCAACTGG+AGG 0.602916 7.4:-50403374 None:intergenic
CTTCGGGAACTTGCTAAAGT+GGG 0.602929 7.4:+50402381 MS.gene027374:CDS
TATTTCCCATAAGAGAGGTA+TGG 0.605924 7.4:+50401227 MS.gene027374:CDS
GATCCTCCAGTTGCACCCAC+AGG 0.606455 7.4:+50403371 MS.gene027374:CDS
AAGTTTGGTATCAACAACAA+AGG 0.612619 7.4:+50401164 MS.gene027374:CDS
AGCACTACACGAGCTAGTCT+AGG 0.619841 7.4:-50404542 None:intergenic
TGCTGCGGGATGCAATTGCA+AGG 0.622944 7.4:+50403633 MS.gene027374:CDS
CATTCGACCACGATGTCTAG+AGG 0.624366 7.4:-50403900 None:intergenic
CAATGGTGTAGATGGAAGAG+AGG 0.625940 7.4:+50404247 MS.gene027374:CDS
TTTGATGGACTTGACTTTAG+GGG 0.626842 7.4:+50401366 MS.gene027374:CDS
TATAATATTTACAACAGCAG+CGG 0.628158 7.4:+50401087 MS.gene027374:CDS
TGTGGATGCGGACCTAAATG+TGG 0.629564 7.4:+50403933 MS.gene027374:CDS
GATGATATTTCCCATAAGAG+AGG 0.634933 7.4:+50401222 MS.gene027374:CDS
ATTGTAGAATGACCTCAAGT+CGG 0.636167 7.4:-50403986 None:intergenic
TTGTATCACACACCTTAGCA+AGG 0.638217 7.4:-50401434 None:intergenic
AAACAGCTTCAATGTCATTG+TGG 0.646249 7.4:+50405553 MS.gene027374:CDS
AAGAGGAATACCTGATAGGG+AGG 0.649275 7.4:-50404584 None:intergenic
CTTGAACTTGAATGACAGCG+AGG 0.651390 7.4:-50401309 None:intergenic
AGGTTGGGCGGTAAGAACAT+GGG 0.665196 7.4:+50404106 MS.gene027374:CDS
TACTCCCAAGAAAGGTTGGG+CGG 0.669811 7.4:+50404094 MS.gene027374:CDS
GTCGAATGTGGACCGCAATG+TGG 0.680163 7.4:+50403915 MS.gene027374:CDS
GGAAACAAAGTTTCTCAACA+GGG 0.682009 7.4:+50403954 MS.gene027374:CDS
TTAGGTCCGCATCCACATTG+CGG 0.684443 7.4:-50403927 None:intergenic
GATGAGCTAGGAAGTGCCAA+CGG 0.706121 7.4:+50404185 MS.gene027374:CDS
GCTGCGGGATGCAATTGCAA+GGG 0.714302 7.4:+50403634 MS.gene027374:CDS
GAGCCATTATGACTAGCACA+AGG 0.716781 7.4:-50403679 None:intergenic
GAGCTAGTCTAGGATCTCTG+TGG 0.733830 7.4:-50404532 None:intergenic
GATCGAGCCTCTAGACATCG+TGG 0.739663 7.4:+50403893 MS.gene027374:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTAAAAATTTAATAAACAAT+TGG + chr7.4:50405452-50405471 MS.gene027374:intron 10.0%
!! TAAAATATGTATGAAATTTA+GGG + chr7.4:50404301-50404320 MS.gene027374:intron 10.0%
!!! TAATTATTTTCATACATTTT+GGG + chr7.4:50405393-50405412 MS.gene027374:intron 10.0%
!!! TAATTGATTTTATTAGTTTT+TGG + chr7.4:50402030-50402049 MS.gene027374:intron 10.0%
!!! TTAATTATTTTCATACATTT+TGG + chr7.4:50405392-50405411 MS.gene027374:intron 10.0%
!! AAAAAATAACAGTATTAAGA+CGG + chr7.4:50405197-50405216 MS.gene027374:intron 15.0%
!! ATTGTATTTATACAATTATG+AGG + chr7.4:50401725-50401744 MS.gene027374:intron 15.0%
!! GTAAAACAAAAAATATTAGA+TGG + chr7.4:50403393-50403412 MS.gene027374:intron 15.0%
!! GTAAAATATGTATGAAATTT+AGG + chr7.4:50404300-50404319 MS.gene027374:intron 15.0%
!! TATTGTTAATATAATCGATA+TGG - chr7.4:50404971-50404990 None:intergenic 15.0%
!! TTACATATTATAAACATCAA+TGG - chr7.4:50404037-50404056 None:intergenic 15.0%
!!! AGAAATTTTATTTTGAAAGA+AGG + chr7.4:50405254-50405273 MS.gene027374:intron 15.0%
!!! GTTTTTGCATTTTTAAAAAA+GGG - chr7.4:50403426-50403445 None:intergenic 15.0%
!!! TCATGATGTTTTAAAATTTT+AGG + chr7.4:50403556-50403575 MS.gene027374:intron 15.0%
!!! TGTTTTTGCATTTTTAAAAA+AGG - chr7.4:50403427-50403446 None:intergenic 15.0%
!! AAAATTAAGATAGTATCATG+AGG - chr7.4:50402268-50402287 None:intergenic 20.0%
!! AAATAATACACACCTAAATT+GGG - chr7.4:50405116-50405135 None:intergenic 20.0%
!! AAGCAATTTATCTGAAAAAA+GGG + chr7.4:50404391-50404410 MS.gene027374:CDS 20.0%
!! AATGTTATTGTATGAAAACT+CGG - chr7.4:50403704-50403723 None:intergenic 20.0%
!! ACATAAATAATATGCAACAT+TGG - chr7.4:50401502-50401521 None:intergenic 20.0%
!! ATTAGAATACGAAATATAAG+TGG - chr7.4:50403117-50403136 None:intergenic 20.0%
!! GGTTAAAATGGAAATTTAAA+GGG - chr7.4:50404746-50404765 None:intergenic 20.0%
!! GTGATGATATAGAAAATATT+TGG - chr7.4:50402698-50402717 None:intergenic 20.0%
!! GTTAAAATGGAAATTTAAAG+GGG - chr7.4:50404745-50404764 None:intergenic 20.0%
!! TAAATATATTAACACATAGC+CGG - chr7.4:50405171-50405190 None:intergenic 20.0%
!! TAAGCAATTTATCTGAAAAA+AGG + chr7.4:50404390-50404409 MS.gene027374:CDS 20.0%
!! TCGTATTCTAATATTCAATT+TGG + chr7.4:50403125-50403144 MS.gene027374:intron 20.0%
!! TGCAAAATCAATTTAATAAG+AGG + chr7.4:50402811-50402830 MS.gene027374:intron 20.0%
!! TGGTTAAAATGGAAATTTAA+AGG - chr7.4:50404747-50404766 None:intergenic 20.0%
!! TGTAATTAGTGTTAGAATTT+GGG + chr7.4:50402769-50402788 MS.gene027374:intron 20.0%
!! TGTAGTAAGATGTATAAATA+TGG + chr7.4:50401665-50401684 MS.gene027374:intron 20.0%
!! TTAAAATCCTTATTACAAAG+AGG - chr7.4:50404604-50404623 None:intergenic 20.0%
!! TTAAAATGGAAATTTAAAGG+GGG - chr7.4:50404744-50404763 None:intergenic 20.0%
!!! AAAAAAAACCACATCTTTTA+TGG + chr7.4:50402597-50402616 MS.gene027374:intron 20.0%
!!! AAAAAAACCACATCTTTTAT+GGG + chr7.4:50402598-50402617 MS.gene027374:intron 20.0%
!!! AATATTTTTTGTTTTACCTG+TGG - chr7.4:50403390-50403409 None:intergenic 20.0%
!!! ATAAAAGATGTGGTTTTTTT+TGG - chr7.4:50402598-50402617 None:intergenic 20.0%
!!! ATATTTTTTGTTTTACCTGT+GGG - chr7.4:50403389-50403408 None:intergenic 20.0%
!!! GAATATTGTTTCTTTAAGTT+TGG + chr7.4:50403286-50403305 MS.gene027374:intron 20.0%
!!! TTTCGTTGTTTTTAGTTTTT+AGG + chr7.4:50402201-50402220 MS.gene027374:intron 20.0%
!!! TTTTCAGATAAATTGCTTAT+AGG - chr7.4:50404389-50404408 None:intergenic 20.0%
!!! TTTTTTTTTTCCAAACATGA+TGG + chr7.4:50404669-50404688 MS.gene027374:intron 20.0%
! AAAGTCAGTCCAATATTAAT+CGG - chr7.4:50402969-50402988 None:intergenic 25.0%
! AAATCAACTCAAAAAAGATG+TGG - chr7.4:50402572-50402591 None:intergenic 25.0%
! AAGTAAGTTATCGTCAATAA+GGG - chr7.4:50405428-50405447 None:intergenic 25.0%
! AATATAATCGATATGGATGA+CGG - chr7.4:50404964-50404983 None:intergenic 25.0%
! AGCGAAAAAAAAAAGGAAAA+AGG - chr7.4:50403471-50403490 None:intergenic 25.0%
! AGTATCTGATAAATAAGCTT+CGG + chr7.4:50402364-50402383 MS.gene027374:CDS 25.0%
! AGTTTGTGTTTATAGTTACT+GGG + chr7.4:50405070-50405089 MS.gene027374:intron 25.0%
! CAAATAATACACACCTAAAT+TGG - chr7.4:50405117-50405136 None:intergenic 25.0%
! GCGAAAAAAAAAAGGAAAAA+GGG - chr7.4:50403470-50403489 None:intergenic 25.0%
! GTGTAATTAGTGTTAGAATT+TGG + chr7.4:50402768-50402787 MS.gene027374:intron 25.0%
! TATAATATTTACAACAGCAG+CGG + chr7.4:50401087-50401106 MS.gene027374:CDS 25.0%
! TCAACTAAGAAATTAACTCT+AGG - chr7.4:50401988-50402007 None:intergenic 25.0%
!! AAGATTGAACAAAAGTACAA+AGG - chr7.4:50402527-50402546 None:intergenic 25.0%
!! CGTATTAGTTTCTTTCTTTA+TGG + chr7.4:50401931-50401950 MS.gene027374:intron 25.0%
!! GAGTTTTCATACAATAACAT+TGG + chr7.4:50403703-50403722 MS.gene027374:CDS 25.0%
!! GATTTTGCAAATATTGAGTT+AGG - chr7.4:50402800-50402819 None:intergenic 25.0%
!! TAGTTTGTGTTTATAGTTAC+TGG + chr7.4:50405069-50405088 MS.gene027374:intron 25.0%
!! TTCAATCTTTTCAACATGTT+GGG - chr7.4:50401127-50401146 None:intergenic 25.0%
!! TTGGTATTTGCTAATTTAAC+AGG + chr7.4:50405471-50405490 MS.gene027374:intron 25.0%
!! TTTAGGTTCATTTAATGGAA+GGG + chr7.4:50403149-50403168 MS.gene027374:intron 25.0%
!!! AAATCTCAAGTAATTTGCTT+TGG - chr7.4:50401840-50401859 None:intergenic 25.0%
!!! AATTTCCATTTTAACCATGT+AGG + chr7.4:50404750-50404769 MS.gene027374:intron 25.0%
!!! ATTTCCATTTTAACCATGTA+GGG + chr7.4:50404751-50404770 MS.gene027374:intron 25.0%
!!! CTAATATTCAATTTGGCTTT+AGG + chr7.4:50403132-50403151 MS.gene027374:intron 25.0%
!!! GTTGGTTTTGTTGTTAAAAT+GGG + chr7.4:50405228-50405247 MS.gene027374:intron 25.0%
!!! TCATTGAAATTTTTCAGAGA+CGG + chr7.4:50404345-50404364 MS.gene027374:intron 25.0%
AAGGAAAAAGGGACATATAT+TGG - chr7.4:50403459-50403478 None:intergenic 30.0%
AAGTTTGGTATCAACAACAA+AGG + chr7.4:50401164-50401183 MS.gene027374:CDS 30.0%
AATAACAGTATTAAGACGGT+AGG + chr7.4:50405201-50405220 MS.gene027374:intron 30.0%
AGGACTCTTGAGATATAAAA+TGG + chr7.4:50405274-50405293 MS.gene027374:intron 30.0%
AGGTATTCCTCTTTGTAATA+AGG + chr7.4:50404594-50404613 MS.gene027374:intron 30.0%
ATTCATTCCCATAAAAGATG+TGG - chr7.4:50402608-50402627 None:intergenic 30.0%
ATTGACGATAACTTACTTCA+TGG + chr7.4:50405430-50405449 MS.gene027374:intron 30.0%
CATGTTGAAAAGATTGAACT+TGG + chr7.4:50401129-50401148 MS.gene027374:CDS 30.0%
CTTACAAAATCAGCTTGTAA+AGG + chr7.4:50402994-50403013 MS.gene027374:intron 30.0%
GAAGATATAATCATTTCCGT+TGG - chr7.4:50404204-50404223 None:intergenic 30.0%
GAAGTAAGTTATCGTCAATA+AGG - chr7.4:50405429-50405448 None:intergenic 30.0%
GATAAATTGCTTATAGGCAA+TGG - chr7.4:50404383-50404402 None:intergenic 30.0%
GATTTCCAAACATCAATGAA+GGG - chr7.4:50401881-50401900 None:intergenic 30.0%
GGACTCTTGAGATATAAAAT+GGG + chr7.4:50405275-50405294 MS.gene027374:intron 30.0%
GTATCTGATAAATAAGCTTC+GGG + chr7.4:50402365-50402384 MS.gene027374:CDS 30.0%
GTTTCAAGATTTATCAACCA+TGG + chr7.4:50404470-50404489 MS.gene027374:CDS 30.0%
TAGAAAAAGTTTAGACGAGT+TGG + chr7.4:50401578-50401597 MS.gene027374:intron 30.0%
TATATCCCTTCATTGATGTT+TGG + chr7.4:50401873-50401892 MS.gene027374:intron 30.0%
TGATTTCCAAACATCAATGA+AGG - chr7.4:50401882-50401901 None:intergenic 30.0%
TGGATCTAACAACTTTATGT+TGG - chr7.4:50404827-50404846 None:intergenic 30.0%
TTGTTGCAGGTAAAGAAAAA+TGG + chr7.4:50402303-50402322 MS.gene027374:intron 30.0%
TTTACCCTACATGGTTAAAA+TGG - chr7.4:50404758-50404777 None:intergenic 30.0%
TTTCATACAATAACATTGGC+AGG + chr7.4:50403707-50403726 MS.gene027374:CDS 30.0%
! AAAATATTGCGACACTTTTG+AGG + chr7.4:50402133-50402152 MS.gene027374:CDS 30.0%
! AAATATTGCGACACTTTTGA+GGG + chr7.4:50402134-50402153 MS.gene027374:CDS 30.0%
! CAAAAATCTAGTAATGGAGA+AGG + chr7.4:50402720-50402739 MS.gene027374:intron 30.0%
! CTTTAGGTTCATTTAATGGA+AGG + chr7.4:50403148-50403167 MS.gene027374:intron 30.0%
! GAAACTTTGTTTCCACATTT+AGG - chr7.4:50403948-50403967 None:intergenic 30.0%
! GTTCAATCTTTTCAACATGT+TGG - chr7.4:50401128-50401147 None:intergenic 30.0%
! TCTCCATTACTAGATTTTTG+CGG - chr7.4:50402720-50402739 None:intergenic 30.0%
! TGCATGATGTGTTATTGAAT+GGG + chr7.4:50401814-50401833 MS.gene027374:intron 30.0%
! TTCTAACACTTGCTTTGTTA+CGG - chr7.4:50404862-50404881 None:intergenic 30.0%
! TTCTTTAAGTTTGGTATGCA+AGG + chr7.4:50403295-50403314 MS.gene027374:intron 30.0%
! TTGCATGATGTGTTATTGAA+TGG + chr7.4:50401813-50401832 MS.gene027374:intron 30.0%
!! ATATCGTTGACATTGACTTA+TGG - chr7.4:50402457-50402476 None:intergenic 30.0%
!! CTTTACAAGCTGATTTTGTA+AGG - chr7.4:50402996-50403015 None:intergenic 30.0%
!! GATTTGTTGATAACATACCT+TGG - chr7.4:50403202-50403221 None:intergenic 30.0%
!! TTATTTTACGCCAAGTCAAA+AGG - chr7.4:50402173-50402192 None:intergenic 30.0%
!! TTGGCTTTAGGTTCATTTAA+TGG + chr7.4:50403144-50403163 MS.gene027374:intron 30.0%
!!! GGAGAAGGTTTTAATTTTCA+TGG + chr7.4:50402735-50402754 MS.gene027374:intron 30.0%
!!! GGTTGGTTTTGTTGTTAAAA+TGG + chr7.4:50405227-50405246 MS.gene027374:intron 30.0%
AAACAGCTTCAATGTCATTG+TGG + chr7.4:50405553-50405572 MS.gene027374:CDS 35.0%
AAACTACCTTTCTCTTACAC+AGG + chr7.4:50404064-50404083 MS.gene027374:intron 35.0%
AAACTCTTTCTTCTTCTCCA+AGG + chr7.4:50403182-50403201 MS.gene027374:CDS 35.0%
AAATGGAAATTTAAAGGGGG+AGG - chr7.4:50404741-50404760 None:intergenic 35.0%
AAGATAGTATCATGAGGCTA+GGG - chr7.4:50402262-50402281 None:intergenic 35.0%
ACAAAGAGGAATACCTGATA+GGG - chr7.4:50404590-50404609 None:intergenic 35.0%
ACACATTGTACAAAGAGGTT+TGG - chr7.4:50404503-50404522 None:intergenic 35.0%
ACAGATGGACCGATTAATAT+TGG + chr7.4:50402957-50402976 MS.gene027374:intron 35.0%
AGAATGTGTGACAATTTCCA+TGG - chr7.4:50401621-50401640 None:intergenic 35.0%
AGCATGCAGCGAAAAAAAAA+AGG - chr7.4:50403478-50403497 None:intergenic 35.0%
ATACTTTAAATGTCCGGACA+TGG - chr7.4:50402914-50402933 None:intergenic 35.0%
ATGTTGGACGCATTTCAAAA+AGG - chr7.4:50404811-50404830 None:intergenic 35.0%
ATTGTAGAATGACCTCAAGT+CGG - chr7.4:50403989-50404008 None:intergenic 35.0%
CAATAACACACCATCATGTT+TGG - chr7.4:50404682-50404701 None:intergenic 35.0%
GATAAACCTGTGTAAGAGAA+AGG - chr7.4:50404073-50404092 None:intergenic 35.0%
GATGATATTTCCCATAAGAG+AGG + chr7.4:50401222-50401241 MS.gene027374:CDS 35.0%
GATTGAACTTGGAAGTAAAG+AGG + chr7.4:50401140-50401159 MS.gene027374:CDS 35.0%
GATTGTTTGCACACAATCAA+TGG + chr7.4:50404230-50404249 MS.gene027374:CDS 35.0%
GGAAACAAAGTTTCTCAACA+GGG + chr7.4:50403954-50403973 MS.gene027374:CDS 35.0%
GGTTAAGAATCTCAGATTGA+AGG - chr7.4:50402878-50402897 None:intergenic 35.0%
GTTTGCTCACAACTTCAAAA+TGG + chr7.4:50401186-50401205 MS.gene027374:CDS 35.0%
TAAGATAGTATCATGAGGCT+AGG - chr7.4:50402263-50402282 None:intergenic 35.0%
TAAGTTATCGTCAATAAGGG+AGG - chr7.4:50405425-50405444 None:intergenic 35.0%
TACAAAGAGGAATACCTGAT+AGG - chr7.4:50404591-50404610 None:intergenic 35.0%
TATTTCCCATAAGAGAGGTA+TGG + chr7.4:50401227-50401246 MS.gene027374:CDS 35.0%
TCACCGCAAAAATCTAGTAA+TGG + chr7.4:50402714-50402733 MS.gene027374:intron 35.0%
TCACTTGTATAGCCATATTG+AGG + chr7.4:50402846-50402865 MS.gene027374:intron 35.0%
TGAAAAAAGGGACGAGTTAA+TGG + chr7.4:50404403-50404422 MS.gene027374:CDS 35.0%
TGAAATAGACCTTGTATCGA+CGG + chr7.4:50404932-50404951 MS.gene027374:intron 35.0%
TGAAGGATAAGACCTCAATA+TGG - chr7.4:50402861-50402880 None:intergenic 35.0%
TGAGAACACATTGTACAAAG+AGG - chr7.4:50404508-50404527 None:intergenic 35.0%
TGGAAACAAAGTTTCTCAAC+AGG + chr7.4:50403953-50403972 MS.gene027374:CDS 35.0%
TGGAAGTAAAGAGGAAAGTT+TGG + chr7.4:50401149-50401168 MS.gene027374:CDS 35.0%
TGGAGGATCATCAAAATCAT+TGG - chr7.4:50403360-50403379 None:intergenic 35.0%
! AAGAGATAAAGCCTTGTCAT+GGG - chr7.4:50403043-50403062 None:intergenic 35.0%
! CAAACATGATGGTGTGTTAT+TGG + chr7.4:50404680-50404699 MS.gene027374:intron 35.0%
! CTCATTTTCAGAACTCTTAG+TGG - chr7.4:50401010-50401029 None:intergenic 35.0%
! GCTAACTTTCATTTTGTTGC+AGG + chr7.4:50402290-50402309 MS.gene027374:intron 35.0%
! TCTAACACTTGCTTTGTTAC+GGG - chr7.4:50404861-50404880 None:intergenic 35.0%
! TGTCATTCAAGTTCAAGAAG+TGG + chr7.4:50401315-50401334 MS.gene027374:CDS 35.0%
! TTCTGAAAATGAGGCTATGA+TGG + chr7.4:50401017-50401036 MS.gene027374:CDS 35.0%
!! ATTGATAACGAATACGTTCC+TGG + chr7.4:50402327-50402346 MS.gene027374:CDS 35.0%
!! CACTAAGAGTTCTGAAAATG+AGG + chr7.4:50401008-50401027 MS.gene027374:CDS 35.0%
!! CTTTGATGGACTTGACTTTA+GGG + chr7.4:50401365-50401384 MS.gene027374:CDS 35.0%
!! GAAATTTTTCAGAGACGGTT+GGG + chr7.4:50404350-50404369 MS.gene027374:intron 35.0%
!! GGCAGGTATTGTTTTACTTT+TGG + chr7.4:50403724-50403743 MS.gene027374:intron 35.0%
!! TCTTTGATGGACTTGACTTT+AGG + chr7.4:50401364-50401383 MS.gene027374:CDS 35.0%
!! TGAAATTTTTCAGAGACGGT+TGG + chr7.4:50404349-50404368 MS.gene027374:intron 35.0%
!! TTTGATGGACTTGACTTTAG+GGG + chr7.4:50401366-50401385 MS.gene027374:CDS 35.0%
!! TTTTCGCTGCATGCTTTATT+TGG + chr7.4:50403483-50403502 MS.gene027374:intron 35.0%
!!! GATGGTGTGTTATTGGTTTT+AGG + chr7.4:50404687-50404706 MS.gene027374:intron 35.0%
AAAATCAGCTTGTAAAGGCG+AGG + chr7.4:50402999-50403018 MS.gene027374:intron 40.0%
AACCAGTTCAGAAGATGACA+TGG - chr7.4:50405355-50405374 None:intergenic 40.0%
AACTGACCATACCTCTCTTA+TGG - chr7.4:50401236-50401255 None:intergenic 40.0%
AAGCCTAGATGTTTCTCTCA+AGG - chr7.4:50401400-50401419 None:intergenic 40.0%
ACACCAATATACTCGACAAC+TGG - chr7.4:50404152-50404171 None:intergenic 40.0%
ACTGACCATACCTCTCTTAT+GGG - chr7.4:50401235-50401254 None:intergenic 40.0%
AGCAAGAATCGACACAAGAT+AGG + chr7.4:50402108-50402127 MS.gene027374:CDS 40.0%
AGTCCATCAAAGACGAACAT+TGG - chr7.4:50401357-50401376 None:intergenic 40.0%
AGTCTTGAACTCACTCTTGT+TGG - chr7.4:50401045-50401064 None:intergenic 40.0%
ATTAAGACGGTAGGTATGGT+TGG + chr7.4:50405210-50405229 MS.gene027374:intron 40.0%
CAAGATGGAACTTCAATGCT+TGG - chr7.4:50403613-50403632 None:intergenic 40.0%
CACACAATCAATGGTGTAGA+TGG + chr7.4:50404239-50404258 MS.gene027374:CDS 40.0%
CAGTATTAAGACGGTAGGTA+TGG + chr7.4:50405206-50405225 MS.gene027374:intron 40.0%
CCAGCATCTATGCAATATTC+AGG - chr7.4:50404437-50404456 None:intergenic 40.0%
CCTGAATATTGCATAGATGC+TGG + chr7.4:50404434-50404453 MS.gene027374:CDS 40.0%
CGGGTCATACTTTAAATGTC+CGG - chr7.4:50402920-50402939 None:intergenic 40.0%
CTTTATACGGTGCCCAATTT+AGG + chr7.4:50405101-50405120 MS.gene027374:intron 40.0%
GAGTGTGTAACCATAGTCAT+AGG - chr7.4:50405503-50405522 None:intergenic 40.0%
GATAGTGTGTCTGATTCTGA+TGG + chr7.4:50405523-50405542 MS.gene027374:CDS 40.0%
GCAAGAATCGACACAAGATA+GGG + chr7.4:50402109-50402128 MS.gene027374:CDS 40.0%
GTAACAACTTCATTTGCAGC+AGG + chr7.4:50402071-50402090 MS.gene027374:intron 40.0%
GTATGCAAGGACATTAGCAA+TGG + chr7.4:50403308-50403327 MS.gene027374:CDS 40.0%
GTCCATCTGTTATCAGGTTT+CGG - chr7.4:50402947-50402966 None:intergenic 40.0%
GTTTATCGTACTCCCAAGAA+AGG + chr7.4:50404086-50404105 MS.gene027374:CDS 40.0%
TAATCGGTCCATCTGTTATC+AGG - chr7.4:50402953-50402972 None:intergenic 40.0%
TACTTCGAAGTAGTGATTCC+AGG - chr7.4:50402348-50402367 None:intergenic 40.0%
TCAATGTCATTGTGGTGCAA+AGG + chr7.4:50405561-50405580 MS.gene027374:CDS 40.0%
TCACCTATAAACCCATGACA+AGG + chr7.4:50403029-50403048 MS.gene027374:intron 40.0%
TCAGAAGATGACATGGAAGA+TGG - chr7.4:50405348-50405367 None:intergenic 40.0%
TCTTCTCAAAGAGTTGAGCT+TGG - chr7.4:50401286-50401305 None:intergenic 40.0%
TGCTAAAGTGGGAACATACA+AGG + chr7.4:50402392-50402411 MS.gene027374:CDS 40.0%
TGTCATGGGTTTATAGGTGA+GGG - chr7.4:50403029-50403048 None:intergenic 40.0%
TGTCCTTGAGAGAAACATCT+AGG + chr7.4:50401394-50401413 MS.gene027374:CDS 40.0%
TGTCCTTGTGCTAGTCATAA+TGG + chr7.4:50403676-50403695 MS.gene027374:CDS 40.0%
TGTTATCAGGTTTCGGCTAT+CGG - chr7.4:50402940-50402959 None:intergenic 40.0%
TTCCATGTCATCTTCTGAAC+TGG + chr7.4:50405350-50405369 MS.gene027374:intron 40.0%
TTGTATCACACACCTTAGCA+AGG - chr7.4:50401437-50401456 None:intergenic 40.0%
TTGTCATGGGTTTATAGGTG+AGG - chr7.4:50403030-50403049 None:intergenic 40.0%
! AAGCCTTGTCATGGGTTTAT+AGG - chr7.4:50403035-50403054 None:intergenic 40.0%
! AATTGGGCACCGTATAAAGA+CGG - chr7.4:50405100-50405119 None:intergenic 40.0%
! CATGATAGTGCGATGTTACA+TGG + chr7.4:50402669-50402688 MS.gene027374:intron 40.0%
! CTAACACTTGCTTTGTTACG+GGG - chr7.4:50404860-50404879 None:intergenic 40.0%
! GAAGAGATAAAGCCTTGTCA+TGG - chr7.4:50403044-50403063 None:intergenic 40.0%
! TAACACTTGCTTTGTTACGG+GGG - chr7.4:50404859-50404878 None:intergenic 40.0%
!! CGAGTTGGATTTCAGACTTT+TGG + chr7.4:50401593-50401612 MS.gene027374:intron 40.0%
!! TCCTTAAGGGTGGTTGTTTT+TGG + chr7.4:50405009-50405028 MS.gene027374:intron 40.0%
!!! ATTTCAGACTTTTGGAGCCA+TGG + chr7.4:50401601-50401620 MS.gene027374:intron 40.0%
!!! CCTTAAGGGTGGTTGTTTTT+GGG + chr7.4:50405010-50405029 MS.gene027374:intron 40.0%
!!! CTCACTGTTTTTACCCTACA+TGG - chr7.4:50404767-50404786 None:intergenic 40.0%
!!! TGCATAGATGCTGGTTCTTT+TGG + chr7.4:50404443-50404462 MS.gene027374:CDS 40.0%
!!! TTGTTACCATCGCTAGCTTT+TGG + chr7.4:50405134-50405153 MS.gene027374:intron 40.0%
AAGAGGAATACCTGATAGGG+AGG - chr7.4:50404587-50404606 None:intergenic 45.0%
ACATGGGACTTTATCCCATC+AGG + chr7.4:50404122-50404141 MS.gene027374:CDS 45.0%
ACTAGCACAAGGACATCTCT+TGG - chr7.4:50403671-50403690 None:intergenic 45.0%
AGAAGACATACCTCCCTATC+AGG + chr7.4:50404574-50404593 MS.gene027374:CDS 45.0%
AGCCGAAACCTGATAACAGA+TGG + chr7.4:50402942-50402961 MS.gene027374:intron 45.0%
ATCGTACTCCCAAGAAAGGT+TGG + chr7.4:50404090-50404109 MS.gene027374:CDS 45.0%
CAATCTTCGTCTCCTTGCTA+AGG + chr7.4:50401422-50401441 MS.gene027374:CDS 45.0%
CAATGGTGTAGATGGAAGAG+AGG + chr7.4:50404247-50404266 MS.gene027374:CDS 45.0%
CAGGAACTCACCTATGACTA+TGG + chr7.4:50405490-50405509 MS.gene027374:intron 45.0%
CCCAAAAACAACCACCCTTA+AGG - chr7.4:50405013-50405032 None:intergenic 45.0%
CGTCCAATGTTCGTCTTTGA+TGG + chr7.4:50401351-50401370 MS.gene027374:CDS 45.0%
CTAAGTAGAGACGATGAGCT+AGG + chr7.4:50404173-50404192 MS.gene027374:CDS 45.0%
CTGGGTGTTCCGTCTTTATA+CGG + chr7.4:50405088-50405107 MS.gene027374:intron 45.0%
CTTAGCAAGGAGACGAAGAT+TGG - chr7.4:50401424-50401443 None:intergenic 45.0%
CTTGAACTTGAATGACAGCG+AGG - chr7.4:50401312-50401331 None:intergenic 45.0%
GAGCCATTATGACTAGCACA+AGG - chr7.4:50403682-50403701 None:intergenic 45.0%
GCACCAGTTGTCGAGTATAT+TGG + chr7.4:50404146-50404165 MS.gene027374:CDS 45.0%
GTTATCAGGTTTCGGCTATC+GGG - chr7.4:50402939-50402958 None:intergenic 45.0%
TCGTACTCCCAAGAAAGGTT+GGG + chr7.4:50404091-50404110 MS.gene027374:CDS 45.0%
TGAAGTTCCATCTTGTGCTG+CGG + chr7.4:50403618-50403637 MS.gene027374:CDS 45.0%
TGTTACGGGGGAAATACATC+TGG - chr7.4:50404847-50404866 None:intergenic 45.0%
! AGAGGTTTGGTTCACATCCA+TGG - chr7.4:50404490-50404509 None:intergenic 45.0%
!! CTTCGGGAACTTGCTAAAGT+GGG + chr7.4:50402381-50402400 MS.gene027374:CDS 45.0%
!! GCAATGTGAGCCTTTTGACT+TGG + chr7.4:50402160-50402179 MS.gene027374:intron 45.0%
!!! AAGGGTGGTTGTTTTTGGGT+TGG + chr7.4:50405014-50405033 MS.gene027374:intron 45.0%
!!! GGTTGTTTTTGGGTTGGCTT+CGG + chr7.4:50405020-50405039 MS.gene027374:intron 45.0%
AAGGTTGGGCGGTAAGAACA+TGG + chr7.4:50404105-50404124 MS.gene027374:CDS 50.0%
AGGTTGGGCGGTAAGAACAT+GGG + chr7.4:50404106-50404125 MS.gene027374:CDS 50.0%
CATTCGACCACGATGTCTAG+AGG - chr7.4:50403903-50403922 None:intergenic 50.0%
CTAGACATCGTGGTCGAATG+TGG + chr7.4:50403903-50403922 MS.gene027374:CDS 50.0%
CTTACCGCCCAACCTTTCTT+GGG - chr7.4:50404101-50404120 None:intergenic 50.0%
GAAGTTCCATCTTGTGCTGC+GGG + chr7.4:50403619-50403638 MS.gene027374:CDS 50.0%
GTGTTTCGGTTCCTTAAGGG+TGG + chr7.4:50404999-50405018 MS.gene027374:intron 50.0%
TACTCCCAAGAAAGGTTGGG+CGG + chr7.4:50404094-50404113 MS.gene027374:CDS 50.0%
TCTTACCGCCCAACCTTTCT+TGG - chr7.4:50404102-50404121 None:intergenic 50.0%
TGTGGATGCGGACCTAAATG+TGG + chr7.4:50403933-50403952 MS.gene027374:CDS 50.0%
TTAGGTCCGCATCCACATTG+CGG - chr7.4:50403930-50403949 None:intergenic 50.0%
! AGCACTACACGAGCTAGTCT+AGG - chr7.4:50404545-50404564 None:intergenic 50.0%
! CGGTAAGTACCGTCGATACA+AGG - chr7.4:50404944-50404963 None:intergenic 50.0%
! GAGCTAGTCTAGGATCTCTG+TGG - chr7.4:50404535-50404554 None:intergenic 50.0%
! GTTTTACCTGTGGGTGCAAC+TGG - chr7.4:50403380-50403399 None:intergenic 50.0%
!! GATGAGCTAGGAAGTGCCAA+CGG + chr7.4:50404185-50404204 MS.gene027374:CDS 50.0%
!! GCTTCGGGAACTTGCTAAAG+TGG + chr7.4:50402380-50402399 MS.gene027374:CDS 50.0%
!! GGGCTTAACTTACCGACTTG+AGG + chr7.4:50403974-50403993 MS.gene027374:CDS 50.0%
CGACAACTGGTGCACCTGAT+GGG - chr7.4:50404139-50404158 None:intergenic 55.0%
GACGAGCCAAAAGCTAGCGA+TGG - chr7.4:50405143-50405162 None:intergenic 55.0%
GATCGAGCCTCTAGACATCG+TGG + chr7.4:50403893-50403912 MS.gene027374:CDS 55.0%
GCTGCGGGATGCAATTGCAA+GGG + chr7.4:50403634-50403653 MS.gene027374:CDS 55.0%
GTCGAATGTGGACCGCAATG+TGG + chr7.4:50403915-50403934 MS.gene027374:CDS 55.0%
TCGACAACTGGTGCACCTGA+TGG - chr7.4:50404140-50404159 None:intergenic 55.0%
TGCTGCGGGATGCAATTGCA+AGG + chr7.4:50403633-50403652 MS.gene027374:CDS 55.0%
TGTGGACCGCAATGTGGATG+CGG + chr7.4:50403921-50403940 MS.gene027374:CDS 55.0%
TTACCTGTGGGTGCAACTGG+AGG - chr7.4:50403377-50403396 None:intergenic 55.0%
TTGCATCCCGCAGCACAAGA+TGG - chr7.4:50403628-50403647 None:intergenic 55.0%
!!! GCTTTTGGCTCGTCTTGTGC+CGG + chr7.4:50405149-50405168 MS.gene027374:intron 55.0%
CACCCTCTCACGTCCATGTC+CGG + chr7.4:50402898-50402917 MS.gene027374:intron 60.0%
GATCCTCCAGTTGCACCCAC+AGG + chr7.4:50403371-50403390 MS.gene027374:CDS 60.0%
GGACATGGACGTGAGAGGGT+GGG - chr7.4:50402899-50402918 None:intergenic 60.0%
GTCCGGACATGGACGTGAGA+GGG - chr7.4:50402903-50402922 None:intergenic 60.0%
TGTCCGGACATGGACGTGAG+AGG - chr7.4:50402904-50402923 None:intergenic 60.0%
!! GGGTTGGCTTCGGTGCTTAG+TGG + chr7.4:50405030-50405049 MS.gene027374:intron 60.0%
CGGACATGGACGTGAGAGGG+TGG - chr7.4:50402900-50402919 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 50401000 50405606 50401000 ID=MS.gene027374
chr7.4 mRNA 50401000 50405606 50401000 ID=MS.gene027374.t1;Parent=MS.gene027374
chr7.4 exon 50401000 50401443 50401000 ID=MS.gene027374.t1.exon1;Parent=MS.gene027374.t1
chr7.4 CDS 50401000 50401443 50401000 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50402090 50402164 50402090 ID=MS.gene027374.t1.exon2;Parent=MS.gene027374.t1
chr7.4 CDS 50402090 50402164 50402090 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50402312 50402416 50402312 ID=MS.gene027374.t1.exon3;Parent=MS.gene027374.t1
chr7.4 CDS 50402312 50402416 50402312 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50403154 50403203 50403154 ID=MS.gene027374.t1.exon4;Parent=MS.gene027374.t1
chr7.4 CDS 50403154 50403203 50403154 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50403304 50403392 50403304 ID=MS.gene027374.t1.exon5;Parent=MS.gene027374.t1
chr7.4 CDS 50403304 50403392 50403304 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50403578 50403728 50403578 ID=MS.gene027374.t1.exon6;Parent=MS.gene027374.t1
chr7.4 CDS 50403578 50403728 50403578 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50403890 50403995 50403890 ID=MS.gene027374.t1.exon7;Parent=MS.gene027374.t1
chr7.4 CDS 50403890 50403995 50403890 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50404086 50404268 50404086 ID=MS.gene027374.t1.exon8;Parent=MS.gene027374.t1
chr7.4 CDS 50404086 50404268 50404086 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50404362 50404595 50404362 ID=MS.gene027374.t1.exon9;Parent=MS.gene027374.t1
chr7.4 CDS 50404362 50404595 50404362 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
chr7.4 exon 50405493 50405606 50405493 ID=MS.gene027374.t1.exon10;Parent=MS.gene027374.t1
chr7.4 CDS 50405493 50405606 50405493 ID=cds.MS.gene027374.t1;Parent=MS.gene027374.t1
Gene Sequence

>MS.gene027374

ATGGAGGCCACTAAGAGTTCTGAAAATGAGGCTATGATGGTACCAACAAGAGTGAGTTCAAGACTTCAGAATCTCTCTAAGATTCAATATAATATTTACAACAGCAGCGGCGACAAAGTTTTTGCCCAACATGTTGAAAAGATTGAACTTGGAAGTAAAGAGGAAAGTTTGGTATCAACAACAAAGGTTTGCTCACAACTTCAAAATGGAAACAAAATTCGAGATGATATTTCCCATAAGAGAGGTATGGTCAGTTTTGAAGACAATGTTGTTGAGAATAGAACCAAGCTCAACTCTTTGAGAAGAAAACCTCGCTGTCATTCAAGTTCAAGAAGTGGTTCAACAATCTCTCGTCCAATGTTCGTCTTTGATGGACTTGACTTTAGGGGCATTTTGTCCTTGAGAGAAACATCTAGGCTTGCCAATCTTCGTCTCCTTGCTAAGGTGTGTGATACAATTAGTTTTCACTTCATTTATTCTTCTCTTGATTATTTTGATTCCAATGTTGCATATTATTTATGTTAGTATTTTAGTAATTATATTCTGAAAGTGCAATTAATTTTGATTTCTTATTATTTTAGAAAAAGTTTAGACGAGTTGGATTTCAGACTTTTGGAGCCATGGAAATTGTCACACATTCTTTTCTTCTTAAATTTTGTTTATCTTGTAGTAAGATGTATAAATATGGTGCAAAACTAATTTATATTATCTAAAGTAATTTCTGAATTGTATTTATACAATTATGAGGTAGTTTAAGTATATATAACTTGAGTAAAAAGAGTATATATCACTTTTTGAAAAAGAAATGTGAAATTGCATGATGTGTTATTGAATGGGCCAAAGCAAATTACTTGAGATTTGTTATATTTAGTTTATATCCCTTCATTGATGTTTGGAAATCAGTTATCTAGTGTTTCATATTTCAAATCAACGTATTAGTTTCTTTCTTTATGGTTGTGTATTAATTTCAATATTTAGTTCAAAGCCTAGAGTTAATTTCTTAGTTGAATACTTAAATTCATTTGTAACTTAATTGATTTTATTAGTTTTTGGTTCTGAATTTCTGATAGTGTAACAACTTCATTTGCAGCAGGAAGAGAAGAATCAAAGCAAGAATCGACACAAGATAGGGAAAAATATTGCGACACTTTTGAGGGCAAGCAATGTGAGCCTTTTGACTTGGCGTAAAATAAATCATGTTTTTCGTTGTTTTTAGTTTTTAGGAGTAACTTTAGTTCTATACTTTTATGCTTCAGCTGCCCTAGCCTCATGATACTATCTTAATTTTGTGCTAACTTTCATTTTGTTGCAGGTAAAGAAAAATGGCATTGATAACGAATACGTTCCTGGAATCACTACTTCGAAGTATCTGATAAATAAGCTTCGGGAACTTGCTAAAGTGGGAACATACAAGGTTGTATGTATTATACGTTTATTTGATTTCTTTTTCATATCCATAAGTCAATGTCAACGATATTTCACTCTTTACTCTCTTATATATGACATGCTTAGTTTATATAGCATCCTTTGTACTTTTGTTCAATCTTTCACTTTTGTTCTCTCTTTTAACCACATCTTTTTTGAGTTGATTTTATCCAAAAAAAACCACATCTTTTATGGGAATGAATTCTCTTTATTTTTTTCATAATCATAGTTTTTGAAATATAAACATGATAGTGCGATGTTACATGGAATCCAAATATTTTCTATATCATCACCGCAAAAATCTAGTAATGGAGAAGGTTTTAATTTTCATGGTATTATTTTAGTGTAATTAGTGTTAGAATTTGGGTTAAGCCTAACTCAATATTTGCAAAATCAATTTAATAAGAGGTGATGATTGCGCTCACTTGTATAGCCATATTGAGGTCTTATCCTTCAATCTGAGATTCTTAACCCACCCTCTCACGTCCATGTCCGGACATTTAAAGTATGACCCGATAGCCGAAACCTGATAACAGATGGACCGATTAATATTGGACTGACTTTAATACCTTACAAAATCAGCTTGTAAAGGCGAGGATTTCCCTCACCTATAAACCCATGACAAGGCTTTATCTCTTCTAATTGAGACTTTTAACATTATGTTTACATTTTATATATATCATTTTGATCCACTTATATTTCGTATTCTAATATTCAATTTGGCTTTAGGTTCATTTAATGGAAGGGCAAGTCTCTAAAACTCTTTCTTCTTCTCCAAGGTATGTTATCAACAAATCTCTTCAGAAATACAGTGTTATTGAGTTCTTTTGATATACATAAATATCTGTAATTGAGTTACAAGAATATTGTTTCTTTAAGTTTGGTATGCAAGGACATTAGCAATGGACAAGAAGCTATCAGCATTATTGCAACCAATGATTTTGATGATCCTCCAGTTGCACCCACAGGTAAAACAAAAAATATTAGATGGAAATGAACCCTTTTTTAAAAATGCAAAAACAAATGCAAATCCAATATATGTCCCTTTTTCCTTTTTTTTTTCGCTGCATGCTTTATTTGGTGAAGTGCATATGTTTTCAAGTCACTCTCTTTTGATAAAGAAAATTGCACTCATGATGTTTTAAAATTTTAGGTTTTGAATACATTACATCAAACAAATTTTCACCAAGCATTGAAGTTCCATCTTGTGCTGCGGGATGCAATTGCAAGGGAAGTTGTAGAACCAAGAGATGTCCTTGTGCTAGTCATAATGGCTCCGAGTTTTCATACAATAACATTGGCAGGTATTGTTTTACTTTTGGATTTGTTGACACAGAAAGATCTTTGACACAGAAAGATCTTACGTTGTAAATAAATATAATTTCACTTGTTTTAAATAGTTTGATGTTCAACACTCTTAAAATTAAGTTCTTAAACTATCAAACTTAATCAATTATTTTGTTAGATTGATCGAGCCTCTAGACATCGTGGTCGAATGTGGACCGCAATGTGGATGCGGACCTAAATGTGGAAACAAAGTTTCTCAACAGGGCTTAACTTACCGACTTGAGGTCATTCTACAATTTACTCAAGTTTCTACACTTGTTTACCATTGATGTTTATAATATGTAAACTAACTAAACTACCTTTCTCTTACACAGGTTTATCGTACTCCCAAGAAAGGTTGGGCGGTAAGAACATGGGACTTTATCCCATCAGGTGCACCAGTTGTCGAGTATATTGGTGTACTAAGTAGAGACGATGAGCTAGGAAGTGCCAACGGAAATGATTATATCTTCGATATTGATTGTTTGCACACAATCAATGGTGTAGATGGAAGAGAGGTAAGAATGCAAAATTTTTTGCAAAATTATTGTAAAATATGTATGAAATTTAGGGTGCTATTAATATAGATTTCTTTCATTGAAATTTTTCAGAGACGGTTGGGTAATGTACCATTGCCTATAAGCAATTTATCTGAAAAAAGGGACGAGTTAATGGAAAAAGATCCTGAATATTGCATAGATGCTGGTTCTTTTGGAAATGTTTCAAGATTTATCAACCATGGATGTGAACCAAACCTCTTTGTACAATGTGTTCTCAGCAGCCACAGAGATCCTAGACTAGCTCGTGTAGTGCTATTTGCAGCAGAAGACATACCTCCCTATCAGGTATTCCTCTTTGTAATAAGGATTTTAAGAATTCATTGTGTTATCATCTTTTTTATTTGATAGCTCACAATGTTTTTTTTTTTCCAAACATGATGGTGTGTTATTGGTTTTAGGAATTTTGTGATTGATTTTAGATGATAATCCTCCCCCTTTAAATTTCCATTTTAACCATGTAGGGTAAAAACAGTGAGAAAAAAATATAAGTCACATCACCTTTTTGAAATGCGTCCAACATAAAGTTGTTAGATCCAGATGTATTTCCCCCGTAACAAAGCAAGTGTTAGAAAGAATGTGTTAATATGAGTATTGCTAATATTATTCTTAATTGAATTGAAATGAAATAGACCTTGTATCGACGGTACTTACCGTCATCCATATCGATTATATTAACAATAACAAGACGGTGTTTCGGTTCCTTAAGGGTGGTTGTTTTTGGGTTGGCTTCGGTGCTTAGTGGTTTTTTGTGTTTGTTGTAGTTTGTGTTTATAGTTACTGGGTGTTCCGTCTTTATACGGTGCCCAATTTAGGTGTGTATTATTTGTTACCATCGCTAGCTTTTGGCTCGTCTTGTGCCGGCTATGTGTTAATATATTTACAGATAAAAAAATAACAGTATTAAGACGGTAGGTATGGTTGGTTTTGTTGTTAAAATGGGACTAGAAATTTTATTTTGAAAGAAGGACTCTTGAGATATAAAATGGGACTAGAAATTTTATTTTGAAAGAAGGACTCTTGAGATATTTTTTTCACCATCTTCCATGTCATCTTCTGAACTGGTTTAATTAGTTCAATTTAATTAATTATTTTCATACATTTTGGGCACATACCTCCCTTATTGACGATAACTTACTTCATGGTAAAAATTTAATAAACAATTGGTATTTGCTAATTTAACAGGAACTCACCTATGACTATGGTTACACACTCGATAGTGTGTCTGATTCTGATGGAAAAATCAAACAGCTTCAATGTCATTGTGGTGCAAAGGAATGTCGTAAGCGCTTGTACTAG
Protein sequence

>MS.gene027374.t1

MEATKSSENEAMMVPTRVSSRLQNLSKIQYNIYNSSGDKVFAQHVEKIELGSKEESLVSTTKVCSQLQNGNKIRDDISHKRGMVSFEDNVVENRTKLNSLRRKPRCHSSSRSGSTISRPMFVFDGLDFRGILSLRETSRLANLRLLAKQEEKNQSKNRHKIGKNIATLLRASNVKKNGIDNEYVPGITTSKYLINKLRELAKVGTYKVVHLMEGQVSKTLSSSPSLVCKDISNGQEAISIIATNDFDDPPVAPTGFEYITSNKFSPSIEVPSCAAGCNCKGSCRTKRCPCASHNGSEFSYNNIGRLIEPLDIVVECGPQCGCGPKCGNKVSQQGLTYRLEVYRTPKKGWAVRTWDFIPSGAPVVEYIGVLSRDDELGSANGNDYIFDIDCLHTINGVDGRERRLGNVPLPISNLSEKRDELMEKDPEYCIDAGSFGNVSRFINHGCEPNLFVQCVLSSHRDPRLARVVLFAAEDIPPYQELTYDYGYTLDSVSDSDGKIKQLQCHCGAKECRKRLY