Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027487.t1 | XP_024632961.1 | 92.3 | 755 | 48 | 2 | 1 | 745 | 1 | 755 | 0.00E+00 | 1361.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027487.t1 | Q9SZL8 | 26.3 | 632 | 398 | 13 | 50 | 679 | 72 | 637 | 5.5e-64 | 247.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027487.t1 | D3YBB9 | 81.3 | 707 | 117 | 2 | 46 | 745 | 78 | 776 | 0.0e+00 | 1176.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene027487.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027487.t1 | MTR_0558s0020 | 88.103 | 311 | 22 | 1 | 1 | 311 | 1 | 296 | 0.0 | 575 |
| MS.gene027487.t1 | MTR_1g083640 | 94.056 | 286 | 17 | 0 | 1 | 286 | 1 | 286 | 0.0 | 567 |
| MS.gene027487.t1 | MTR_8g446020 | 75.884 | 311 | 20 | 3 | 1 | 311 | 1 | 256 | 1.79e-159 | 462 |
| MS.gene027487.t1 | MTR_2g014100 | 87.747 | 253 | 22 | 2 | 1 | 252 | 1 | 245 | 9.53e-157 | 455 |
| MS.gene027487.t1 | MTR_6g090505 | 86.920 | 237 | 31 | 0 | 81 | 317 | 1 | 237 | 8.83e-146 | 431 |
| MS.gene027487.t1 | MTR_6g090505 | 63.889 | 108 | 12 | 2 | 406 | 511 | 224 | 306 | 8.07e-33 | 130 |
| MS.gene027487.t1 | MTR_6g090505 | 86.047 | 43 | 6 | 0 | 587 | 629 | 320 | 362 | 2.37e-16 | 82.0 |
| MS.gene027487.t1 | MTR_0337s0040 | 71.739 | 276 | 24 | 2 | 1 | 276 | 1 | 222 | 1.22e-128 | 382 |
| MS.gene027487.t1 | MTR_3g008240 | 82.110 | 218 | 24 | 1 | 1 | 218 | 1 | 203 | 3.49e-123 | 367 |
| MS.gene027487.t1 | MTR_4g040430 | 82.569 | 218 | 18 | 3 | 1 | 218 | 1 | 198 | 6.21e-121 | 361 |
| MS.gene027487.t1 | MTR_5g071590 | 86.885 | 183 | 21 | 1 | 1 | 183 | 1 | 180 | 1.00e-111 | 337 |
| MS.gene027487.t1 | MTR_0337s0060 | 58.304 | 283 | 23 | 3 | 463 | 745 | 21 | 208 | 4.46e-94 | 293 |
| MS.gene027487.t1 | MTR_1g055240 | 91.549 | 142 | 12 | 0 | 107 | 248 | 3 | 144 | 3.20e-89 | 277 |
| MS.gene027487.t1 | MTR_0019s0290 | 86.928 | 153 | 17 | 1 | 100 | 249 | 8 | 160 | 1.20e-88 | 276 |
| MS.gene027487.t1 | MTR_1281s0010 | 91.964 | 112 | 9 | 0 | 35 | 146 | 1 | 112 | 2.69e-68 | 220 |
| MS.gene027487.t1 | MTR_4g133495 | 75.397 | 126 | 28 | 1 | 590 | 712 | 88 | 213 | 1.82e-58 | 200 |
| MS.gene027487.t1 | MTR_4g133340 | 75.397 | 126 | 28 | 1 | 590 | 712 | 88 | 213 | 1.82e-58 | 200 |
| MS.gene027487.t1 | MTR_3g028680 | 82.456 | 114 | 20 | 0 | 632 | 745 | 1 | 114 | 4.63e-58 | 196 |
| MS.gene027487.t1 | MTR_2g067090 | 81.308 | 107 | 20 | 0 | 635 | 741 | 99 | 205 | 3.18e-52 | 183 |
| MS.gene027487.t1 | MTR_6g051425 | 31.737 | 334 | 192 | 8 | 56 | 368 | 22 | 340 | 3.49e-41 | 154 |
| MS.gene027487.t1 | MTR_8g046060 | 81.250 | 96 | 9 | 2 | 1 | 95 | 91 | 178 | 1.08e-38 | 143 |
| MS.gene027487.t1 | MTR_4g008820 | 76.842 | 95 | 7 | 1 | 1 | 95 | 125 | 204 | 1.94e-35 | 143 |
| MS.gene027487.t1 | MTR_1g070355 | 25.081 | 307 | 209 | 5 | 3 | 307 | 24 | 311 | 1.15e-20 | 97.1 |
| MS.gene027487.t1 | MTR_0337s0050 | 80.556 | 36 | 7 | 0 | 275 | 310 | 14 | 49 | 3.53e-14 | 68.6 |
| MS.gene027487.t1 | MTR_0402s0040 | 25.946 | 185 | 118 | 4 | 65 | 249 | 40 | 205 | 3.68e-14 | 76.3 |
| MS.gene027487.t1 | MTR_1g013060 | 29.630 | 216 | 133 | 8 | 56 | 269 | 29 | 227 | 3.20e-13 | 70.5 |
| MS.gene027487.t1 | MTR_4g035820 | 23.396 | 265 | 178 | 5 | 56 | 315 | 80 | 324 | 5.95e-13 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027487.t1 | AT4G38180 | 26.582 | 632 | 396 | 14 | 50 | 679 | 72 | 637 | 2.12e-69 | 243 |
| MS.gene027487.t1 | AT4G15090 | 25.592 | 676 | 424 | 15 | 66 | 737 | 66 | 666 | 1.12e-59 | 217 |
| MS.gene027487.t1 | AT4G15090 | 25.592 | 676 | 424 | 15 | 66 | 737 | 66 | 666 | 1.12e-59 | 217 |
| MS.gene027487.t1 | AT4G15090 | 25.592 | 676 | 424 | 15 | 66 | 737 | 66 | 666 | 1.12e-59 | 217 |
| MS.gene027487.t1 | AT4G15090 | 25.592 | 676 | 424 | 15 | 66 | 737 | 66 | 666 | 1.12e-59 | 217 |
| MS.gene027487.t1 | AT4G15090 | 25.592 | 676 | 424 | 15 | 66 | 737 | 66 | 666 | 1.12e-59 | 217 |
| MS.gene027487.t1 | AT3G06250 | 25.077 | 646 | 355 | 17 | 39 | 675 | 178 | 703 | 4.35e-52 | 194 |
| MS.gene027487.t1 | AT3G06250 | 25.077 | 646 | 355 | 17 | 39 | 675 | 178 | 703 | 4.35e-52 | 194 |
| MS.gene027487.t1 | AT3G06250 | 25.077 | 646 | 355 | 17 | 39 | 675 | 178 | 703 | 4.35e-52 | 194 |
| MS.gene027487.t1 | AT3G22170 | 23.780 | 635 | 395 | 14 | 48 | 676 | 67 | 618 | 2.20e-50 | 190 |
| MS.gene027487.t1 | AT3G22170 | 23.780 | 635 | 395 | 14 | 48 | 676 | 67 | 618 | 2.20e-50 | 190 |
| MS.gene027487.t1 | AT1G76320 | 25.080 | 626 | 379 | 14 | 57 | 676 | 3 | 544 | 9.35e-50 | 186 |
| MS.gene027487.t1 | AT1G76320 | 25.000 | 628 | 381 | 14 | 55 | 676 | 1 | 544 | 2.45e-49 | 186 |
| MS.gene027487.t1 | AT1G76320 | 25.000 | 628 | 381 | 14 | 55 | 676 | 1 | 544 | 2.62e-49 | 186 |
| MS.gene027487.t1 | AT1G76320 | 25.000 | 628 | 381 | 14 | 55 | 676 | 1 | 544 | 2.62e-49 | 186 |
| MS.gene027487.t1 | AT2G27110 | 25.984 | 508 | 319 | 14 | 229 | 733 | 36 | 489 | 7.29e-48 | 181 |
| MS.gene027487.t1 | AT2G27110 | 25.984 | 508 | 319 | 14 | 229 | 733 | 181 | 634 | 1.79e-47 | 181 |
| MS.gene027487.t1 | AT2G27110 | 25.984 | 508 | 319 | 14 | 229 | 733 | 181 | 634 | 1.79e-47 | 181 |
| MS.gene027487.t1 | AT1G10240 | 25.645 | 620 | 373 | 20 | 65 | 673 | 62 | 604 | 4.68e-47 | 178 |
| MS.gene027487.t1 | AT1G10240 | 25.645 | 620 | 373 | 20 | 65 | 673 | 62 | 604 | 4.68e-47 | 178 |
| MS.gene027487.t1 | AT5G18960 | 24.308 | 650 | 362 | 19 | 37 | 675 | 197 | 727 | 6.29e-47 | 179 |
| MS.gene027487.t1 | AT5G18960 | 24.308 | 650 | 362 | 19 | 37 | 675 | 197 | 727 | 6.29e-47 | 179 |
| MS.gene027487.t1 | AT5G28530 | 24.316 | 658 | 402 | 18 | 56 | 695 | 60 | 639 | 5.65e-45 | 172 |
| MS.gene027487.t1 | AT5G28530 | 24.316 | 658 | 398 | 19 | 56 | 695 | 60 | 635 | 4.36e-44 | 169 |
| MS.gene027487.t1 | AT5G28530 | 24.316 | 658 | 398 | 19 | 56 | 695 | 60 | 635 | 4.36e-44 | 169 |
| MS.gene027487.t1 | AT4G19990 | 25.000 | 656 | 384 | 20 | 57 | 703 | 27 | 583 | 4.09e-43 | 167 |
| MS.gene027487.t1 | AT4G19990 | 25.000 | 656 | 384 | 20 | 57 | 703 | 27 | 583 | 4.09e-43 | 167 |
| MS.gene027487.t1 | AT4G19990 | 27.484 | 473 | 287 | 12 | 235 | 703 | 106 | 526 | 4.30e-43 | 167 |
| MS.gene027487.t1 | AT4G19990 | 25.000 | 656 | 384 | 20 | 57 | 703 | 27 | 583 | 4.71e-43 | 167 |
| MS.gene027487.t1 | AT4G19990 | 25.228 | 658 | 380 | 21 | 57 | 703 | 27 | 583 | 6.70e-43 | 167 |
| MS.gene027487.t1 | AT4G19990 | 25.228 | 658 | 380 | 21 | 57 | 703 | 27 | 583 | 6.70e-43 | 167 |
| MS.gene027487.t1 | AT4G19990 | 25.228 | 658 | 380 | 21 | 57 | 703 | 41 | 597 | 6.73e-43 | 167 |
| MS.gene027487.t1 | AT4G38170 | 24.242 | 429 | 269 | 8 | 251 | 676 | 24 | 399 | 8.18e-43 | 164 |
| MS.gene027487.t1 | AT1G80010 | 25.077 | 646 | 373 | 22 | 57 | 676 | 101 | 661 | 1.10e-40 | 160 |
| MS.gene027487.t1 | AT2G32250 | 23.278 | 726 | 433 | 20 | 24 | 745 | 13 | 618 | 2.03e-39 | 156 |
| MS.gene027487.t1 | AT2G32250 | 23.278 | 726 | 433 | 20 | 24 | 745 | 13 | 618 | 2.86e-39 | 156 |
| MS.gene027487.t1 | AT2G32250 | 23.278 | 726 | 433 | 20 | 24 | 745 | 13 | 618 | 2.86e-39 | 156 |
| MS.gene027487.t1 | AT2G32250 | 23.278 | 726 | 433 | 20 | 24 | 745 | 13 | 618 | 2.96e-39 | 156 |
| MS.gene027487.t1 | AT2G32250 | 23.278 | 726 | 433 | 20 | 24 | 745 | 13 | 618 | 2.96e-39 | 156 |
| MS.gene027487.t1 | AT2G32250 | 23.278 | 726 | 433 | 20 | 24 | 745 | 13 | 618 | 2.96e-39 | 156 |
| MS.gene027487.t1 | AT2G32250 | 23.521 | 693 | 408 | 19 | 57 | 745 | 3 | 577 | 5.30e-39 | 155 |
| MS.gene027487.t1 | AT2G32250 | 23.521 | 693 | 408 | 19 | 57 | 745 | 3 | 577 | 5.75e-39 | 155 |
| MS.gene027487.t1 | AT1G52520 | 23.323 | 626 | 396 | 19 | 57 | 676 | 91 | 638 | 1.01e-36 | 147 |
| MS.gene027487.t1 | AT5G28530 | 22.222 | 648 | 365 | 21 | 56 | 695 | 60 | 576 | 4.65e-26 | 114 |
| MS.gene027487.t1 | AT5G28530 | 22.068 | 648 | 362 | 22 | 56 | 695 | 60 | 572 | 3.17e-25 | 111 |
Find 100 sgRNAs with CRISPR-Local
Find 162 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATGCTGAGTTGGACTTTA+AGG | 0.133287 | 5.4:+26389196 | MS.gene027487:CDS |
| TAAATTTCAGCTGCCTTTAT+TGG | 0.156227 | 5.4:+26388606 | MS.gene027487:intron |
| CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 5.4:+26389154 | MS.gene027487:CDS |
| AATCGTCTGTGGTTTCTTAT+TGG | 0.195298 | 5.4:-26388733 | None:intergenic |
| CAACTAGATTATTCTCTATT+CGG | 0.265452 | 5.4:+26388023 | MS.gene027487:CDS |
| TCTGTTGTTGGCCTGTTGTT+AGG | 0.292589 | 5.4:-26387516 | None:intergenic |
| GCCTTCCAATGTTGATGTTT+TGG | 0.297192 | 5.4:+26389445 | MS.gene027487:CDS |
| CGATCATGATCTTCAAAACT+TGG | 0.305304 | 5.4:-26389494 | None:intergenic |
| TTACTTCTCGAAATGATCTA+AGG | 0.311482 | 5.4:-26387707 | None:intergenic |
| TTAAAGATCTTGGAGTTCTT+AGG | 0.311862 | 5.4:+26389614 | MS.gene027487:CDS |
| GCATACGATTTGCGTAAGTT+TGG | 0.338878 | 5.4:-26389010 | None:intergenic |
| GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 5.4:-26388073 | None:intergenic |
| ATGATTGTCAAAACCAATAA+AGG | 0.364908 | 5.4:-26388619 | None:intergenic |
| CTCGACGGTGTTCTTGAAGC+TGG | 0.383392 | 5.4:+26389854 | MS.gene027487:CDS |
| GGACCGCATCAGCTGACTAT+TGG | 0.383948 | 5.4:-26389249 | None:intergenic |
| AACTAGATTATTCTCTATTC+GGG | 0.384365 | 5.4:+26388024 | MS.gene027487:CDS |
| AACAATAAATATCGGCCATT+AGG | 0.388497 | 5.4:+26388080 | MS.gene027487:CDS |
| ACCGAACAAACAATAAATAT+CGG | 0.389395 | 5.4:+26388072 | MS.gene027487:CDS |
| GAGAACGTCTTATGAAGTTA+TGG | 0.394356 | 5.4:+26387782 | MS.gene027487:CDS |
| ATTTGTATAAGATATATAGA+TGG | 0.396319 | 5.4:+26387637 | MS.gene027487:CDS |
| TTCCTTCAAATACTATTATG+AGG | 0.399583 | 5.4:+26389328 | MS.gene027487:CDS |
| GACCGCATCAGCTGACTATT+GGG | 0.402584 | 5.4:-26389248 | None:intergenic |
| GAAGGCCTACCTCAGACTTT+AGG | 0.402909 | 5.4:+26388979 | MS.gene027487:CDS |
| CATGTCGTATGTTTGAGAAC+AGG | 0.415108 | 5.4:+26389570 | MS.gene027487:CDS |
| CGTTATGTTTGTAACAAAGA+AGG | 0.427485 | 5.4:+26387468 | MS.gene027487:CDS |
| AAAACACCTGGAAAACTATT+CGG | 0.428349 | 5.4:-26388792 | None:intergenic |
| GAAGTTATGGGTCAAGGAGT+TGG | 0.428685 | 5.4:+26387795 | MS.gene027487:CDS |
| CGAGAAGTAAATGAAGTTCA+AGG | 0.430014 | 5.4:+26387720 | MS.gene027487:CDS |
| TCCATGATTCTTTATTGCTA+GGG | 0.444266 | 5.4:-26387305 | None:intergenic |
| TTCCATGATTCTTTATTGCT+AGG | 0.445442 | 5.4:-26387306 | None:intergenic |
| TATGCATTGGTCTTCAGCTT+GGG | 0.450920 | 5.4:+26389028 | MS.gene027487:CDS |
| CTTGCTTTGCATTTATTCAC+AGG | 0.460007 | 5.4:+26389294 | MS.gene027487:CDS |
| GCTCTTATAAATTCTAAAGC+TGG | 0.462891 | 5.4:+26387750 | MS.gene027487:CDS |
| AGAACGTCTTATGAAGTTAT+GGG | 0.466325 | 5.4:+26387783 | MS.gene027487:CDS |
| GTTTACTTAATCCTAACAAC+AGG | 0.470860 | 5.4:+26387505 | MS.gene027487:CDS |
| CGCTTTAAAACATATTGTCC+AGG | 0.471916 | 5.4:-26389671 | None:intergenic |
| CTAAGGTAACGCGAATGCTC+TGG | 0.476897 | 5.4:-26387690 | None:intergenic |
| ATCATGATCGATTTGATGAA+AGG | 0.476999 | 5.4:+26389507 | MS.gene027487:CDS |
| GTATGCATTGGTCTTCAGCT+TGG | 0.479582 | 5.4:+26389027 | MS.gene027487:CDS |
| TTTAAGTCTGAAAACCGAAA+AGG | 0.483010 | 5.4:-26387834 | None:intergenic |
| CTCCTCATAATAGTATTTGA+AGG | 0.485089 | 5.4:-26389330 | None:intergenic |
| GATCATGATCTTCAAAACTT+GGG | 0.487945 | 5.4:-26389493 | None:intergenic |
| CATTCTTTGAAGACAATACC+TGG | 0.489494 | 5.4:+26389653 | MS.gene027487:CDS |
| TATGAGGAGGACACAACAAA+AGG | 0.490908 | 5.4:+26389344 | MS.gene027487:CDS |
| TTGAAGACTTAGATGGCGTC+GGG | 0.493598 | 5.4:-26389933 | None:intergenic |
| ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 5.4:+26389168 | MS.gene027487:CDS |
| CCCCTAGCAATAAAGAATCA+TGG | 0.497001 | 5.4:+26387304 | MS.gene027487:CDS |
| AGCTGAAATATATTTGAAGC+TGG | 0.502732 | 5.4:+26387602 | MS.gene027487:CDS |
| TGAATAAATGCAAAGCAAGA+AGG | 0.503349 | 5.4:-26389290 | None:intergenic |
| TTACAACCAACCCTTTCCTC+AGG | 0.505082 | 5.4:-26387579 | None:intergenic |
| GAGGGATAATCATGCTGAGT+TGG | 0.508852 | 5.4:+26389187 | MS.gene027487:CDS |
| ACAAAACAAGAAATCTGATA+AGG | 0.511435 | 5.4:+26387434 | MS.gene027487:CDS |
| ACCAGTGGACTGTCTGTTGT+TGG | 0.515301 | 5.4:-26387528 | None:intergenic |
| TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 5.4:-26389136 | None:intergenic |
| GAATAAATGCAAAGCAAGAA+GGG | 0.521406 | 5.4:-26389289 | None:intergenic |
| ATATCAACTTCATCTGAGAC+TGG | 0.523078 | 5.4:+26387180 | MS.gene027487:CDS |
| GGTAATTATGCATATAACAC+TGG | 0.523547 | 5.4:+26387372 | MS.gene027487:CDS |
| TTTGTATAAGATATATAGAT+GGG | 0.523615 | 5.4:+26387638 | MS.gene027487:CDS |
| TAACAAAGAAGGTTTCAAGA+AGG | 0.525236 | 5.4:+26387479 | MS.gene027487:CDS |
| TAAGATATATAGATGGGATG+TGG | 0.528498 | 5.4:+26387644 | MS.gene027487:CDS |
| CATAATAGTATTTGAAGGAA+AGG | 0.529686 | 5.4:-26389325 | None:intergenic |
| ATGAGGAGGACACAACAAAA+GGG | 0.529908 | 5.4:+26389345 | MS.gene027487:CDS |
| TGGGCTTTGTTCATGGCACA+TGG | 0.532868 | 5.4:+26388818 | MS.gene027487:CDS |
| CCATGATTCTTTATTGCTAG+GGG | 0.537011 | 5.4:-26387304 | None:intergenic |
| AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 5.4:-26389131 | None:intergenic |
| TGCATCCAAAACATCAACAT+TGG | 0.544202 | 5.4:-26389450 | None:intergenic |
| AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 5.4:+26387480 | MS.gene027487:CDS |
| AACACAATAACGCACTAGCC+TGG | 0.552106 | 5.4:-26388764 | None:intergenic |
| AAGATCTTGGAGTTCTTAGG+TGG | 0.553166 | 5.4:+26389617 | MS.gene027487:CDS |
| GTCTTCAGTGACAACATTGA+CGG | 0.559754 | 5.4:-26389738 | None:intergenic |
| ATGTCGTATGTTTGAGAACA+GGG | 0.560861 | 5.4:+26389571 | MS.gene027487:CDS |
| GGCCTACCTCAGACTTTAGG+TGG | 0.565384 | 5.4:+26388982 | MS.gene027487:CDS |
| ATTCTCGACGGTATTCGTAC+AGG | 0.568833 | 5.4:+26389910 | MS.gene027487:CDS |
| TCCAAAACATCAACATTGGA+AGG | 0.569301 | 5.4:-26389446 | None:intergenic |
| GAATGCTCTGGTTTATGTAA+TGG | 0.573489 | 5.4:-26387678 | None:intergenic |
| TTTGAAGACTTAGATGGCGT+CGG | 0.575863 | 5.4:-26389934 | None:intergenic |
| ATCATGATCTTCAAAACTTG+GGG | 0.577988 | 5.4:-26389492 | None:intergenic |
| GTTATGGGTCAAGGAGTTGG+AGG | 0.578191 | 5.4:+26387798 | MS.gene027487:CDS |
| TCTTATGAAGTTATGGGTCA+AGG | 0.580120 | 5.4:+26387789 | MS.gene027487:CDS |
| CTTACGCAAATCGTATGCAT+TGG | 0.597846 | 5.4:+26389015 | MS.gene027487:CDS |
| TATGATGATGCTGATAATGA+CGG | 0.599988 | 5.4:+26389422 | MS.gene027487:CDS |
| TTGATATCGTTGTGCTTGAG+TGG | 0.601464 | 5.4:-26389762 | None:intergenic |
| TCACTGATTCATGCTGAGAG+TGG | 0.606950 | 5.4:+26387225 | MS.gene027487:CDS |
| CTTCAAATACTATTATGAGG+AGG | 0.607664 | 5.4:+26389331 | MS.gene027487:CDS |
| GCCAACAACAGACAGTCCAC+TGG | 0.611268 | 5.4:+26387527 | MS.gene027487:CDS |
| ATGATGATGCTGATAATGAC+GGG | 0.620534 | 5.4:+26389423 | MS.gene027487:CDS |
| ATCCCAATAGTCAGCTGATG+CGG | 0.623586 | 5.4:+26389246 | MS.gene027487:CDS |
| GGGTCAAGGAGTTGGAGGCA+CGG | 0.637387 | 5.4:+26387803 | MS.gene027487:CDS |
| TCTTTCTAAAGAATTCTCGA+CGG | 0.637449 | 5.4:+26389898 | MS.gene027487:CDS |
| CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 5.4:+26389169 | MS.gene027487:CDS |
| TGGTCTGTATAAATCGTCTG+TGG | 0.650424 | 5.4:-26388744 | None:intergenic |
| TTCACAAACTCAATAACCAG+TGG | 0.650808 | 5.4:-26387543 | None:intergenic |
| GATTTCAGCTTATCGACAGA+CGG | 0.652942 | 5.4:-26389713 | None:intergenic |
| GACAAGCCACCTAAAGTCTG+AGG | 0.653221 | 5.4:-26388988 | None:intergenic |
| TGTCGTATGTTTGAGAACAG+GGG | 0.653807 | 5.4:+26389572 | MS.gene027487:CDS |
| AATAAATGCAAAGCAAGAAG+GGG | 0.664515 | 5.4:-26389288 | None:intergenic |
| AGCCACCTAAAGTCTGAGGT+AGG | 0.684957 | 5.4:-26388984 | None:intergenic |
| ACTAGATTATTCTCTATTCG+GGG | 0.686575 | 5.4:+26388025 | MS.gene027487:CDS |
| AGGGGTGTACTTGTTTACAA+CGG | 0.695086 | 5.4:-26389270 | None:intergenic |
| ACAGACGATTTATACAGACC+AGG | 0.720235 | 5.4:+26388746 | MS.gene027487:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTGTATAAGATATATAGA+TGG | + | chr5.4:26387637-26387656 | MS.gene027487:CDS | 15.0% |
| !! | TTTGTATAAGATATATAGAT+GGG | + | chr5.4:26387638-26387657 | MS.gene027487:CDS | 15.0% |
| !!! | TTTTGATGAGTTAAATAATT+TGG | + | chr5.4:26388887-26388906 | MS.gene027487:CDS | 15.0% |
| !! | TGAATATCATAGTAAAAAGA+TGG | - | chr5.4:26387951-26387970 | None:intergenic | 20.0% |
| !!! | AAAGAGATTGAAGATTTTTA+TGG | + | chr5.4:26387351-26387370 | MS.gene027487:CDS | 20.0% |
| !!! | AATCAGATTTTGACTATAAT+TGG | + | chr5.4:26388928-26388947 | MS.gene027487:CDS | 20.0% |
| !!! | ATCAGATTTTGACTATAATT+GGG | + | chr5.4:26388929-26388948 | MS.gene027487:CDS | 20.0% |
| !!! | ATGATGATAAATTGTTTTGA+TGG | + | chr5.4:26388957-26388976 | MS.gene027487:CDS | 20.0% |
| !!! | TATTGTATTTTGTTCTGATA+TGG | + | chr5.4:26388577-26388596 | MS.gene027487:intron | 20.0% |
| !!! | TTAACCATGTTGTTTATTTA+GGG | + | chr5.4:26388246-26388265 | MS.gene027487:intron | 20.0% |
| !!! | TTCTTATAATTTGTGATTAC+AGG | + | chr5.4:26388438-26388457 | MS.gene027487:intron | 20.0% |
| !!! | TTTAACCATGTTGTTTATTT+AGG | + | chr5.4:26388245-26388264 | MS.gene027487:intron | 20.0% |
| !!! | TTTTTCAAAGTTTTCACAAT+TGG | + | chr5.4:26389383-26389402 | MS.gene027487:CDS | 20.0% |
| ! | AAATCCCTAAATAAACAACA+TGG | - | chr5.4:26388253-26388272 | None:intergenic | 25.0% |
| ! | AACTAGATTATTCTCTATTC+GGG | + | chr5.4:26388024-26388043 | MS.gene027487:CDS | 25.0% |
| ! | ACAAAACAAGAAATCTGATA+AGG | + | chr5.4:26387434-26387453 | MS.gene027487:CDS | 25.0% |
| ! | ACACACTTATTAGAATACTT+AGG | + | chr5.4:26388374-26388393 | MS.gene027487:intron | 25.0% |
| ! | ACCGAACAAACAATAAATAT+CGG | + | chr5.4:26388072-26388091 | MS.gene027487:CDS | 25.0% |
| ! | AGTAAAAAACACTAACCTAA+TGG | - | chr5.4:26388098-26388117 | None:intergenic | 25.0% |
| ! | ATGATTGTCAAAACCAATAA+AGG | - | chr5.4:26388622-26388641 | None:intergenic | 25.0% |
| ! | CAACTAGATTATTCTCTATT+CGG | + | chr5.4:26388023-26388042 | MS.gene027487:CDS | 25.0% |
| ! | CATAATAGTATTTGAAGGAA+AGG | - | chr5.4:26389328-26389347 | None:intergenic | 25.0% |
| ! | CTTACTTATTTGAACTACAT+GGG | + | chr5.4:26388222-26388241 | MS.gene027487:intron | 25.0% |
| ! | CTTTAGTCATTTCAACATTA+TGG | + | chr5.4:26389154-26389173 | MS.gene027487:CDS | 25.0% |
| ! | TCTTACTTATTTGAACTACA+TGG | + | chr5.4:26388221-26388240 | MS.gene027487:intron | 25.0% |
| ! | TTAAGTTTGTCTCAAACAAA+TGG | - | chr5.4:26388287-26388306 | None:intergenic | 25.0% |
| ! | TTCCTTCAAATACTATTATG+AGG | + | chr5.4:26389328-26389347 | MS.gene027487:CDS | 25.0% |
| !! | AACTTTGAAAAACTTCTCAA+AGG | - | chr5.4:26389375-26389394 | None:intergenic | 25.0% |
| !! | ATAACACTGGATTTTCTATT+AGG | + | chr5.4:26387385-26387404 | MS.gene027487:CDS | 25.0% |
| !! | TCATCTAAAAATTTTCTCGA+CGG | + | chr5.4:26389839-26389858 | MS.gene027487:CDS | 25.0% |
| !!! | AAGACATAGCTAGTATTTTT+TGG | + | chr5.4:26387985-26388004 | MS.gene027487:CDS | 25.0% |
| !!! | AGAAAATTTTTAGATGACTC+TGG | - | chr5.4:26389836-26389855 | None:intergenic | 25.0% |
| !!! | ATTTATATTTTGAACTGCCT+AGG | + | chr5.4:26388322-26388341 | MS.gene027487:intron | 25.0% |
| !!! | TGATAAATTGTTTTGATGGA+AGG | + | chr5.4:26388961-26388980 | MS.gene027487:CDS | 25.0% |
| AAAACACCTGGAAAACTATT+CGG | - | chr5.4:26388795-26388814 | None:intergenic | 30.0% | |
| AACAAAGAAGGTTTCAAGAA+GGG | + | chr5.4:26387480-26387499 | MS.gene027487:CDS | 30.0% | |
| AACAATAAATATCGGCCATT+AGG | + | chr5.4:26388080-26388099 | MS.gene027487:CDS | 30.0% | |
| AATAAATGCAAAGCAAGAAG+GGG | - | chr5.4:26389291-26389310 | None:intergenic | 30.0% | |
| ACTAGATTATTCTCTATTCG+GGG | + | chr5.4:26388025-26388044 | MS.gene027487:CDS | 30.0% | |
| AGAACGTCTTATGAAGTTAT+GGG | + | chr5.4:26387783-26387802 | MS.gene027487:CDS | 30.0% | |
| ATCATGATCTTCAAAACTTG+GGG | - | chr5.4:26389495-26389514 | None:intergenic | 30.0% | |
| CGTTATGTTTGTAACAAAGA+AGG | + | chr5.4:26387468-26387487 | MS.gene027487:CDS | 30.0% | |
| CTCCTCATAATAGTATTTGA+AGG | - | chr5.4:26389333-26389352 | None:intergenic | 30.0% | |
| CTTCAAATACTATTATGAGG+AGG | + | chr5.4:26389331-26389350 | MS.gene027487:CDS | 30.0% | |
| GAATAAATGCAAAGCAAGAA+GGG | - | chr5.4:26389292-26389311 | None:intergenic | 30.0% | |
| GAGAATGCAAAGAAAAATCT+TGG | + | chr5.4:26388843-26388862 | MS.gene027487:CDS | 30.0% | |
| GATCATGATCTTCAAAACTT+GGG | - | chr5.4:26389496-26389515 | None:intergenic | 30.0% | |
| GCCGATATTTATTGTTTGTT+CGG | - | chr5.4:26388076-26388095 | None:intergenic | 30.0% | |
| GGTAATTATGCATATAACAC+TGG | + | chr5.4:26387372-26387391 | MS.gene027487:CDS | 30.0% | |
| GTTTACTTAATCCTAACAAC+AGG | + | chr5.4:26387505-26387524 | MS.gene027487:CDS | 30.0% | |
| TAAAGAATCGAACAAGTGAA+TGG | - | chr5.4:26389139-26389158 | None:intergenic | 30.0% | |
| TAAATTTCAGCTGCCTTTAT+TGG | + | chr5.4:26388606-26388625 | MS.gene027487:intron | 30.0% | |
| TAACAAAGAAGGTTTCAAGA+AGG | + | chr5.4:26387479-26387498 | MS.gene027487:CDS | 30.0% | |
| TAAGAACTATAGTCAATCCT+AGG | - | chr5.4:26388206-26388225 | None:intergenic | 30.0% | |
| TAAGATATATAGATGGGATG+TGG | + | chr5.4:26387644-26387663 | MS.gene027487:CDS | 30.0% | |
| TCCATGATTCTTTATTGCTA+GGG | - | chr5.4:26387308-26387327 | None:intergenic | 30.0% | |
| TGAATAAATGCAAAGCAAGA+AGG | - | chr5.4:26389293-26389312 | None:intergenic | 30.0% | |
| TTAAAGATCTTGGAGTTCTT+AGG | + | chr5.4:26389614-26389633 | MS.gene027487:CDS | 30.0% | |
| TTACTTCTCGAAATGATCTA+AGG | - | chr5.4:26387710-26387729 | None:intergenic | 30.0% | |
| TTATAAGAAAATCATGCCTC+AGG | - | chr5.4:26388427-26388446 | None:intergenic | 30.0% | |
| TTCCATGATTCTTTATTGCT+AGG | - | chr5.4:26387309-26387328 | None:intergenic | 30.0% | |
| TTTAAGTCTGAAAACCGAAA+AGG | - | chr5.4:26387837-26387856 | None:intergenic | 30.0% | |
| ! | AGCTGAAATATATTTGAAGC+TGG | + | chr5.4:26387602-26387621 | MS.gene027487:CDS | 30.0% |
| ! | CAAAGTTTTCACAATTGGTA+AGG | + | chr5.4:26389388-26389407 | MS.gene027487:CDS | 30.0% |
| ! | TATGATGATGCTGATAATGA+CGG | + | chr5.4:26389422-26389441 | MS.gene027487:CDS | 30.0% |
| ! | TCTTTCTAAAGAATTCTCGA+CGG | + | chr5.4:26389898-26389917 | MS.gene027487:CDS | 30.0% |
| !! | ATCATGATCGATTTGATGAA+AGG | + | chr5.4:26389507-26389526 | MS.gene027487:CDS | 30.0% |
| !! | GCTCTTATAAATTCTAAAGC+TGG | + | chr5.4:26387750-26387769 | MS.gene027487:CDS | 30.0% |
| !!! | GACAATATGTTTTAAAGCGT+TGG | + | chr5.4:26389675-26389694 | MS.gene027487:CDS | 30.0% |
| !!! | TAGTGTTTTTTACTTCTCTC+AGG | + | chr5.4:26388104-26388123 | MS.gene027487:intron | 30.0% |
| !!! | TCGACATGTTTTAAAGATCT+TGG | + | chr5.4:26389604-26389623 | MS.gene027487:CDS | 30.0% |
| AAAAAATGCACTGTTTGCAC+GGG | - | chr5.4:26388871-26388890 | None:intergenic | 35.0% | |
| AATCGTCTGTGGTTTCTTAT+TGG | - | chr5.4:26388736-26388755 | None:intergenic | 35.0% | |
| AATTCGTCAAAAAGAGATGG+TGG | + | chr5.4:26387872-26387891 | MS.gene027487:CDS | 35.0% | |
| ACATTATGGTTCAGAGAATG+AGG | + | chr5.4:26389168-26389187 | MS.gene027487:CDS | 35.0% | |
| AGCAATGACTAATTAAGGGT+TGG | + | chr5.4:26388463-26388482 | MS.gene027487:intron | 35.0% | |
| AGGCTAGCAATGACTAATTA+AGG | + | chr5.4:26388458-26388477 | MS.gene027487:intron | 35.0% | |
| AGTAAAAAGATGGTTTCGAG+AGG | - | chr5.4:26387941-26387960 | None:intergenic | 35.0% | |
| ATGTCGTATGTTTGAGAACA+GGG | + | chr5.4:26389571-26389590 | MS.gene027487:CDS | 35.0% | |
| CAAAAAATGCACTGTTTGCA+CGG | - | chr5.4:26388872-26388891 | None:intergenic | 35.0% | |
| CATTATGGTTCAGAGAATGA+GGG | + | chr5.4:26389169-26389188 | MS.gene027487:CDS | 35.0% | |
| CCATGATTCTTTATTGCTAG+GGG | - | chr5.4:26387307-26387326 | None:intergenic | 35.0% | |
| CGAGAAGTAAATGAAGTTCA+AGG | + | chr5.4:26387720-26387739 | MS.gene027487:CDS | 35.0% | |
| CGATCATGATCTTCAAAACT+TGG | - | chr5.4:26389497-26389516 | None:intergenic | 35.0% | |
| CTTGCTTTGCATTTATTCAC+AGG | + | chr5.4:26389294-26389313 | MS.gene027487:CDS | 35.0% | |
| GAAAGAAAAACCTGAGGAAA+GGG | + | chr5.4:26387569-26387588 | MS.gene027487:CDS | 35.0% | |
| GACAATTCGTCAAAAAGAGA+TGG | + | chr5.4:26387869-26387888 | MS.gene027487:CDS | 35.0% | |
| GAGAACGTCTTATGAAGTTA+TGG | + | chr5.4:26387782-26387801 | MS.gene027487:CDS | 35.0% | |
| GGCTAGCAATGACTAATTAA+GGG | + | chr5.4:26388459-26388478 | MS.gene027487:intron | 35.0% | |
| GTAAAAAGATGGTTTCGAGA+GGG | - | chr5.4:26387940-26387959 | None:intergenic | 35.0% | |
| TCCAAAACATCAACATTGGA+AGG | - | chr5.4:26389449-26389468 | None:intergenic | 35.0% | |
| TCTTATGAAGTTATGGGTCA+AGG | + | chr5.4:26387789-26387808 | MS.gene027487:CDS | 35.0% | |
| TGACTAATTAAGGGTTGGAT+TGG | + | chr5.4:26388468-26388487 | MS.gene027487:intron | 35.0% | |
| TGCATCCAAAACATCAACAT+TGG | - | chr5.4:26389453-26389472 | None:intergenic | 35.0% | |
| TGTTCTTGAAGCTGGAAAAA+AGG | + | chr5.4:26389862-26389881 | MS.gene027487:CDS | 35.0% | |
| TTCACAAACTCAATAACCAG+TGG | - | chr5.4:26387546-26387565 | None:intergenic | 35.0% | |
| ! | AGTTTTCCAGGTGTTTTTCA+TGG | + | chr5.4:26388798-26388817 | MS.gene027487:CDS | 35.0% |
| ! | ATATCAACTTCATCTGAGAC+TGG | + | chr5.4:26387180-26387199 | MS.gene027487:CDS | 35.0% |
| ! | ATGATGATGCTGATAATGAC+GGG | + | chr5.4:26389423-26389442 | MS.gene027487:CDS | 35.0% |
| ! | ATTTAGTTTACGCATTCCTG+AGG | + | chr5.4:26388408-26388427 | MS.gene027487:intron | 35.0% |
| ! | CATTCTTTGAAGACAATACC+TGG | + | chr5.4:26389653-26389672 | MS.gene027487:CDS | 35.0% |
| ! | GAATGCTCTGGTTTATGTAA+TGG | - | chr5.4:26387681-26387700 | None:intergenic | 35.0% |
| ! | GTTTTCCAGGTGTTTTTCAT+GGG | + | chr5.4:26388799-26388818 | MS.gene027487:CDS | 35.0% |
| ! | TCAATTCCGAATAGTTTTCC+AGG | + | chr5.4:26388786-26388805 | MS.gene027487:CDS | 35.0% |
| ! | TCTTTCAATGCTTTTCTTCG+TGG | + | chr5.4:26389098-26389117 | MS.gene027487:CDS | 35.0% |
| !! | AGACAGCATCTACTTTTGAT+TGG | + | chr5.4:26388682-26388701 | MS.gene027487:CDS | 35.0% |
| !! | CGCTTTAAAACATATTGTCC+AGG | - | chr5.4:26389674-26389693 | None:intergenic | 35.0% |
| !!! | CATCGTAAGAGTGTTTTGTT+CGG | + | chr5.4:26388639-26388658 | MS.gene027487:CDS | 35.0% |
| !!! | GCTAGTATTTTTTGGTCAGA+TGG | + | chr5.4:26387993-26388012 | MS.gene027487:CDS | 35.0% |
| !!! | TTTTTCATGGGCTTTGTTCA+TGG | + | chr5.4:26388811-26388830 | MS.gene027487:CDS | 35.0% |
| AAGATCTTGGAGTTCTTAGG+TGG | + | chr5.4:26389617-26389636 | MS.gene027487:CDS | 40.0% | |
| AATCGAACAAGTGAATGGTC+TGG | - | chr5.4:26389134-26389153 | None:intergenic | 40.0% | |
| ACAGACGATTTATACAGACC+AGG | + | chr5.4:26388746-26388765 | MS.gene027487:CDS | 40.0% | |
| ATGAGGAGGACACAACAAAA+GGG | + | chr5.4:26389345-26389364 | MS.gene027487:CDS | 40.0% | |
| CATGTCGTATGTTTGAGAAC+AGG | + | chr5.4:26389570-26389589 | MS.gene027487:CDS | 40.0% | |
| CCCCTAGCAATAAAGAATCA+TGG | + | chr5.4:26387304-26387323 | MS.gene027487:CDS | 40.0% | |
| CGAAAGAAAAACCTGAGGAA+AGG | + | chr5.4:26387568-26387587 | MS.gene027487:CDS | 40.0% | |
| CTTACGCAAATCGTATGCAT+TGG | + | chr5.4:26389015-26389034 | MS.gene027487:CDS | 40.0% | |
| GAAAGCGAAAGAAAAACCTG+AGG | + | chr5.4:26387563-26387582 | MS.gene027487:CDS | 40.0% | |
| GATTTCAGCTTATCGACAGA+CGG | - | chr5.4:26389716-26389735 | None:intergenic | 40.0% | |
| GCATACGATTTGCGTAAGTT+TGG | - | chr5.4:26389013-26389032 | None:intergenic | 40.0% | |
| GTCTTCAGTGACAACATTGA+CGG | - | chr5.4:26389741-26389760 | None:intergenic | 40.0% | |
| TATGAGGAGGACACAACAAA+AGG | + | chr5.4:26389344-26389363 | MS.gene027487:CDS | 40.0% | |
| TCACACAAGACAAAATGCCT+AGG | - | chr5.4:26388342-26388361 | None:intergenic | 40.0% | |
| TGGTCTGTATAAATCGTCTG+TGG | - | chr5.4:26388747-26388766 | None:intergenic | 40.0% | |
| TGTCGTATGTTTGAGAACAG+GGG | + | chr5.4:26389572-26389591 | MS.gene027487:CDS | 40.0% | |
| TTGATATCGTTGTGCTTGAG+TGG | - | chr5.4:26389765-26389784 | None:intergenic | 40.0% | |
| TTTGAAGACTTAGATGGCGT+CGG | - | chr5.4:26389937-26389956 | None:intergenic | 40.0% | |
| ! | AGGGGTGTACTTGTTTACAA+CGG | - | chr5.4:26389273-26389292 | None:intergenic | 40.0% |
| ! | CAGTACATTTTGAACTGCCT+AGG | + | chr5.4:26388186-26388205 | MS.gene027487:intron | 40.0% |
| ! | GCCTTCCAATGTTGATGTTT+TGG | + | chr5.4:26389445-26389464 | MS.gene027487:CDS | 40.0% |
| ! | GTCAAGTCACATTTTACAGC+TGG | + | chr5.4:26389050-26389069 | MS.gene027487:CDS | 40.0% |
| ! | TCATGCTGAGTTGGACTTTA+AGG | + | chr5.4:26389196-26389215 | MS.gene027487:CDS | 40.0% |
| !! | TATGCATTGGTCTTCAGCTT+GGG | + | chr5.4:26389028-26389047 | MS.gene027487:CDS | 40.0% |
| AACACAATAACGCACTAGCC+TGG | - | chr5.4:26388767-26388786 | None:intergenic | 45.0% | |
| ATCCCAATAGTCAGCTGATG+CGG | + | chr5.4:26389246-26389265 | MS.gene027487:CDS | 45.0% | |
| ATTCTCGACGGTATTCGTAC+AGG | + | chr5.4:26389910-26389929 | MS.gene027487:CDS | 45.0% | |
| CAAAGCCCATGAAAAACACC+TGG | - | chr5.4:26388807-26388826 | None:intergenic | 45.0% | |
| GAAAAACCTGAGGAAAGGGT+TGG | + | chr5.4:26387573-26387592 | MS.gene027487:CDS | 45.0% | |
| GAAGTTATGGGTCAAGGAGT+TGG | + | chr5.4:26387795-26387814 | MS.gene027487:CDS | 45.0% | |
| GAGGGATAATCATGCTGAGT+TGG | + | chr5.4:26389187-26389206 | MS.gene027487:CDS | 45.0% | |
| TGAAGCTGGAAAAAAGGCAG+AGG | + | chr5.4:26389868-26389887 | MS.gene027487:CDS | 45.0% | |
| TTACAACCAACCCTTTCCTC+AGG | - | chr5.4:26387582-26387601 | None:intergenic | 45.0% | |
| TTGAAGACTTAGATGGCGTC+GGG | - | chr5.4:26389936-26389955 | None:intergenic | 45.0% | |
| ! | CGTCAAAAAGAGATGGTGGT+TGG | + | chr5.4:26387876-26387895 | MS.gene027487:CDS | 45.0% |
| ! | GCACGGAGAATCTTCCTTTT+CGG | + | chr5.4:26387820-26387839 | MS.gene027487:CDS | 45.0% |
| ! | TCTGTTGTTGGCCTGTTGTT+AGG | - | chr5.4:26387519-26387538 | None:intergenic | 45.0% |
| !! | GTATGCATTGGTCTTCAGCT+TGG | + | chr5.4:26389027-26389046 | MS.gene027487:CDS | 45.0% |
| !! | TCACTGATTCATGCTGAGAG+TGG | + | chr5.4:26387225-26387244 | MS.gene027487:CDS | 45.0% |
| CTAAGGTAACGCGAATGCTC+TGG | - | chr5.4:26387693-26387712 | None:intergenic | 50.0% | |
| GAAGGCCTACCTCAGACTTT+AGG | + | chr5.4:26388979-26388998 | MS.gene027487:CDS | 50.0% | |
| GACAAGCCACCTAAAGTCTG+AGG | - | chr5.4:26388991-26389010 | None:intergenic | 50.0% | |
| GACCGCATCAGCTGACTATT+GGG | - | chr5.4:26389251-26389270 | None:intergenic | 50.0% | |
| GTTATGGGTCAAGGAGTTGG+AGG | + | chr5.4:26387798-26387817 | MS.gene027487:CDS | 50.0% | |
| ! | AGCCACCTAAAGTCTGAGGT+AGG | - | chr5.4:26388987-26389006 | None:intergenic | 50.0% |
| !! | ACCAGTGGACTGTCTGTTGT+TGG | - | chr5.4:26387531-26387550 | None:intergenic | 50.0% |
| !! | TGGGCTTTGTTCATGGCACA+TGG | + | chr5.4:26388818-26388837 | MS.gene027487:CDS | 50.0% |
| CTCGACGGTGTTCTTGAAGC+TGG | + | chr5.4:26389854-26389873 | MS.gene027487:CDS | 55.0% | |
| GCCAACAACAGACAGTCCAC+TGG | + | chr5.4:26387527-26387546 | MS.gene027487:CDS | 55.0% | |
| GGACCGCATCAGCTGACTAT+TGG | - | chr5.4:26389252-26389271 | None:intergenic | 55.0% | |
| GGCCTACCTCAGACTTTAGG+TGG | + | chr5.4:26388982-26389001 | MS.gene027487:CDS | 55.0% | |
| GGGTCAAGGAGTTGGAGGCA+CGG | + | chr5.4:26387803-26387822 | MS.gene027487:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 26387171 | 26389961 | 26387171 | ID=MS.gene027487 |
| chr5.4 | mRNA | 26387171 | 26389961 | 26387171 | ID=MS.gene027487.t1;Parent=MS.gene027487 |
| chr5.4 | exon | 26387171 | 26388101 | 26387171 | ID=MS.gene027487.t1.exon1;Parent=MS.gene027487.t1 |
| chr5.4 | CDS | 26387171 | 26388101 | 26387171 | ID=cds.MS.gene027487.t1;Parent=MS.gene027487.t1 |
| chr5.4 | exon | 26388616 | 26389961 | 26388616 | ID=MS.gene027487.t1.exon2;Parent=MS.gene027487.t1 |
| chr5.4 | CDS | 26388616 | 26389961 | 26388616 | ID=cds.MS.gene027487.t1;Parent=MS.gene027487.t1 |
| Gene Sequence |
| Protein sequence |
