Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02749.t1 | XP_013463066.1 | 98 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 6.30E-132 | 480.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02749.t1 | Q8VWK4 | 58.0 | 250 | 94 | 5 | 1 | 245 | 1 | 244 | 6.5e-69 | 262.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02749.t1 | A0A072VG04 | 98.0 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 4.6e-132 | 480.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene02749.t1 | TF | MYB-related |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02749.t1 | MTR_2g031870 | 97.980 | 297 | 6 | 0 | 1 | 297 | 1 | 297 | 0.0 | 588 |
MS.gene02749.t1 | MTR_2g031870 | 89.226 | 297 | 6 | 1 | 1 | 297 | 1 | 271 | 0.0 | 518 |
MS.gene02749.t1 | MTR_8g494240 | 74.689 | 241 | 55 | 2 | 1 | 239 | 1 | 237 | 1.44e-126 | 363 |
MS.gene02749.t1 | MTR_8g494240 | 74.689 | 241 | 55 | 2 | 1 | 239 | 1 | 237 | 4.70e-126 | 362 |
MS.gene02749.t1 | MTR_8g494240 | 74.689 | 241 | 55 | 2 | 1 | 239 | 1 | 237 | 1.80e-124 | 361 |
MS.gene02749.t1 | MTR_8g494240 | 49.550 | 111 | 26 | 3 | 4 | 114 | 305 | 385 | 3.39e-21 | 92.8 |
MS.gene02749.t1 | MTR_8g092810 | 66.667 | 252 | 75 | 1 | 1 | 243 | 1 | 252 | 8.03e-110 | 326 |
MS.gene02749.t1 | MTR_0095s0040 | 72.258 | 155 | 41 | 1 | 1 | 153 | 1 | 155 | 3.17e-77 | 236 |
MS.gene02749.t1 | MTR_5g015340 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 3.30e-64 | 204 |
MS.gene02749.t1 | MTR_5g015340 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 3.30e-64 | 204 |
MS.gene02749.t1 | MTR_4g097130 | 44.664 | 253 | 124 | 5 | 1 | 239 | 1 | 251 | 5.57e-64 | 204 |
MS.gene02749.t1 | MTR_4g097130 | 44.664 | 253 | 124 | 5 | 1 | 239 | 1 | 251 | 7.43e-64 | 203 |
MS.gene02749.t1 | MTR_4g097130 | 43.411 | 258 | 125 | 5 | 1 | 239 | 1 | 256 | 1.75e-62 | 200 |
MS.gene02749.t1 | MTR_5g015340 | 48.548 | 241 | 111 | 6 | 1 | 236 | 1 | 233 | 2.89e-62 | 202 |
MS.gene02749.t1 | MTR_1g088180 | 63.636 | 121 | 41 | 2 | 125 | 245 | 295 | 412 | 2.41e-39 | 143 |
MS.gene02749.t1 | MTR_8g018410 | 33.108 | 296 | 155 | 7 | 1 | 282 | 1 | 267 | 3.38e-32 | 120 |
MS.gene02749.t1 | MTR_2g099610 | 35.349 | 215 | 108 | 4 | 1 | 190 | 1 | 209 | 1.90e-28 | 111 |
MS.gene02749.t1 | MTR_1g041765 | 67.123 | 73 | 23 | 1 | 1 | 73 | 1 | 72 | 6.83e-27 | 104 |
MS.gene02749.t1 | MTR_2g031880 | 50.000 | 110 | 47 | 2 | 59 | 168 | 1 | 102 | 1.17e-23 | 93.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02749.t1 | AT1G49950 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.56e-88 | 265 |
MS.gene02749.t1 | AT1G49950 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.56e-88 | 265 |
MS.gene02749.t1 | AT1G49950 | 57.895 | 247 | 91 | 6 | 1 | 241 | 1 | 240 | 4.56e-88 | 265 |
MS.gene02749.t1 | AT3G49850 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 3.65e-53 | 176 |
MS.gene02749.t1 | AT3G49850 | 42.735 | 234 | 128 | 3 | 1 | 232 | 1 | 230 | 3.65e-53 | 176 |
MS.gene02749.t1 | AT5G67580 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 1.72e-52 | 174 |
MS.gene02749.t1 | AT5G67580 | 43.210 | 243 | 131 | 5 | 1 | 239 | 1 | 240 | 1.72e-52 | 174 |
MS.gene02749.t1 | AT1G72740 | 37.056 | 197 | 121 | 2 | 1 | 197 | 1 | 194 | 5.30e-32 | 120 |
MS.gene02749.t1 | AT1G72740 | 36.453 | 203 | 120 | 3 | 1 | 197 | 1 | 200 | 1.10e-29 | 114 |
MS.gene02749.t1 | AT1G17520 | 38.342 | 193 | 112 | 2 | 1 | 187 | 1 | 192 | 2.20e-28 | 110 |
MS.gene02749.t1 | AT1G17520 | 39.572 | 187 | 106 | 2 | 1 | 181 | 1 | 186 | 1.71e-27 | 108 |
MS.gene02749.t1 | AT1G17520 | 38.144 | 194 | 112 | 3 | 1 | 187 | 1 | 193 | 5.71e-27 | 107 |
MS.gene02749.t1 | AT1G17520 | 39.362 | 188 | 106 | 3 | 1 | 181 | 1 | 187 | 4.64e-26 | 104 |
MS.gene02749.t1 | AT1G54260 | 45.205 | 73 | 40 | 0 | 120 | 192 | 2 | 74 | 3.64e-12 | 64.7 |
Find 78 sgRNAs with CRISPR-Local
Find 279 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAGATATGCCGCAAATTTC+TGG | 0.156146 | 2.3:-58205840 | MS.gene02749:CDS |
AAGCCAAGATTTACCGTCTT+TGG | 0.203558 | 2.3:+58202594 | None:intergenic |
ACACCCATCAACATTATTAT+TGG | 0.217687 | 2.3:-58202882 | MS.gene02749:CDS |
TAGATATAGCTTCCATTATA+AGG | 0.267054 | 2.3:+58205106 | None:intergenic |
TCATCATCACTTAGAGAAAA+AGG | 0.267733 | 2.3:+58205894 | None:intergenic |
GTATTCTGTAGGACCATTAC+TGG | 0.323222 | 2.3:-58203977 | MS.gene02749:intron |
AATGAAAAGGGTGCATTATC+AGG | 0.328121 | 2.3:-58205952 | MS.gene02749:CDS |
AGCCAAGATTTACCGTCTTT+GGG | 0.343837 | 2.3:+58202595 | None:intergenic |
TCAAGCATGGGGTGGGTAAA+TGG | 0.345523 | 2.3:-58206214 | MS.gene02749:CDS |
CCTTCCAATAATAATGTTGA+TGG | 0.370851 | 2.3:+58202878 | None:intergenic |
TATAAAACATGGTTAAATTC+AGG | 0.375074 | 2.3:+58206173 | None:intergenic |
TTATTGGAAGGGAGGCAAAA+AGG | 0.396790 | 2.3:-58202866 | MS.gene02749:CDS |
TCGGTCAAATGTTGATCTAA+AGG | 0.406182 | 2.3:-58206147 | MS.gene02749:intron |
AATACACGAGGACAACTCTA+TGG | 0.413485 | 2.3:-58205925 | MS.gene02749:CDS |
GGGTTGTTGGATAGGATAAA+TGG | 0.426577 | 2.3:-58206031 | MS.gene02749:intron |
TTCAGGTGAAGCGCAGGTAT+AGG | 0.433823 | 2.3:-58202940 | MS.gene02749:intron |
TTCTAATTCTAAATCGATCT+CGG | 0.439248 | 2.3:+58202799 | None:intergenic |
TTCTAAATCGATCTCGGACT+TGG | 0.444342 | 2.3:+58202805 | None:intergenic |
CTCTTCAGCCTCCGCCATGA+GGG | 0.446885 | 2.3:+58202709 | None:intergenic |
TTGTAGAAGCTGAAAGGAAA+AGG | 0.451081 | 2.3:-58202634 | MS.gene02749:CDS |
CAGGTTGGATAACCTTATAA+TGG | 0.457504 | 2.3:-58205118 | MS.gene02749:CDS |
GGAGGCAGAGGCTGCAGAAG+CGG | 0.467500 | 2.3:-58202678 | MS.gene02749:CDS |
AATCGATCTCGGACTTGGTA+TGG | 0.471610 | 2.3:+58202810 | None:intergenic |
CTTCCTCTGTCTGAATATGC+TGG | 0.476422 | 2.3:+58202905 | None:intergenic |
AGCCAAAGGGAGCAATGAAA+AGG | 0.479925 | 2.3:-58205965 | MS.gene02749:CDS |
CCTCATGGCGGAGGCTGAAG+AGG | 0.487598 | 2.3:-58202708 | MS.gene02749:CDS |
AACCATTGCTTCTTTCATTG+AGG | 0.488576 | 2.3:-58205052 | MS.gene02749:intron |
TGCTCGAGCAGTTGCTGAAG+CGG | 0.494217 | 2.3:-58202735 | MS.gene02749:CDS |
GAGGAATCCGCACTTAAAGC+TGG | 0.499504 | 2.3:-58206242 | MS.gene02749:CDS |
CTGAAGTATCTTACATCTCG+TGG | 0.499992 | 2.3:-58203918 | MS.gene02749:CDS |
GGCAGAGGCTGCAGAAGCGG+AGG | 0.501552 | 2.3:-58202675 | MS.gene02749:CDS |
AGCGGAAGCCCTCATGGCGG+AGG | 0.503203 | 2.3:-58202717 | MS.gene02749:CDS |
CCTCTTCAGCCTCCGCCATG+AGG | 0.504586 | 2.3:+58202708 | None:intergenic |
TGCTGAAGCGGAAGCCCTCA+TGG | 0.511274 | 2.3:-58202723 | MS.gene02749:CDS |
ATAGAGTTGTCCTCGTGTAT+TGG | 0.517777 | 2.3:+58205927 | None:intergenic |
GGCTGCCTCTTGTGCAGACA+TGG | 0.522460 | 2.3:+58202766 | None:intergenic |
ATATCTAGCTTGAATGAACT+TGG | 0.526305 | 2.3:-58205090 | MS.gene02749:CDS |
ATCTCGTGGAAAACTGATCA+AGG | 0.527774 | 2.3:-58203904 | MS.gene02749:intron |
AACTGCTCGAGCAGCACATG+CGG | 0.528875 | 2.3:+58202745 | None:intergenic |
GGCAAGTGGATGGGCTTCGA+GGG | 0.532126 | 2.3:-58205991 | MS.gene02749:CDS |
TATTCTGTAGGACCATTACT+GGG | 0.533689 | 2.3:-58203976 | MS.gene02749:intron |
TTATATTTCAGGTGAAGCGC+AGG | 0.535455 | 2.3:-58202946 | MS.gene02749:intron |
AAGCTGGAGTTATCAAGCAT+GGG | 0.537538 | 2.3:-58206226 | MS.gene02749:CDS |
CTGTCTGAATATGCTGGAGT+AGG | 0.541994 | 2.3:+58202911 | None:intergenic |
AAAGCTGGAGTTATCAAGCA+TGG | 0.542386 | 2.3:-58206227 | MS.gene02749:CDS |
TGGCAAGTGGATGGGCTTCG+AGG | 0.542668 | 2.3:-58205992 | MS.gene02749:CDS |
CCATCAACATTATTATTGGA+AGG | 0.543532 | 2.3:-58202878 | MS.gene02749:CDS |
AGAGGCAACAAAGGAGGCAG+AGG | 0.547850 | 2.3:-58202690 | MS.gene02749:CDS |
AGTCAGCAGGTGCCCAGTAA+TGG | 0.551122 | 2.3:+58203964 | None:intergenic |
CAACATTATTATTGGAAGGG+AGG | 0.564310 | 2.3:-58202874 | MS.gene02749:CDS |
CATCAACATTATTATTGGAA+GGG | 0.566044 | 2.3:-58202877 | MS.gene02749:CDS |
AAGGTCCATGTCTGCACAAG+AGG | 0.566181 | 2.3:-58202771 | MS.gene02749:CDS |
GCCAAAGGGAGCAATGAAAA+GGG | 0.571330 | 2.3:-58205964 | MS.gene02749:CDS |
TACCTCAATGAAAGAAGCAA+TGG | 0.571520 | 2.3:+58205050 | None:intergenic |
TCTAGCTTGAATGAACTTGG+TGG | 0.579223 | 2.3:-58205087 | MS.gene02749:CDS |
TGAGCGTGATGGCAAGTGGA+TGG | 0.581001 | 2.3:-58206001 | MS.gene02749:CDS |
GAGCGTGATGGCAAGTGGAT+GGG | 0.581966 | 2.3:-58206000 | MS.gene02749:CDS |
GGAGTTATCAAGCATGGGGT+GGG | 0.587974 | 2.3:-58206221 | MS.gene02749:CDS |
CTTCCAATAATAATGTTGAT+GGG | 0.591104 | 2.3:+58202879 | None:intergenic |
TTAGATCAACATTTGACCGA+AGG | 0.594489 | 2.3:+58206150 | None:intergenic |
GGAGGCTGAAGAGGCAACAA+AGG | 0.596715 | 2.3:-58202699 | MS.gene02749:CDS |
TGGAGTTATCAAGCATGGGG+TGG | 0.597697 | 2.3:-58206222 | MS.gene02749:CDS |
GGCTTCGAGGGAGAAGCCAA+AGG | 0.598632 | 2.3:-58205979 | MS.gene02749:CDS |
GGCTGAAGAGGCAACAAAGG+AGG | 0.605389 | 2.3:-58202696 | MS.gene02749:CDS |
ATGGCGAAATTTGAGCGTGA+TGG | 0.606348 | 2.3:-58206012 | MS.gene02749:CDS |
AGAAGCGGAGGCAGATGCAA+TGG | 0.616552 | 2.3:-58202663 | MS.gene02749:CDS |
AGCTGAAAGGAAAAGGCTGA+AGG | 0.619969 | 2.3:-58202627 | MS.gene02749:CDS |
GCTTCGAGGGAGAAGCCAAA+GGG | 0.621979 | 2.3:-58205978 | MS.gene02749:CDS |
GGTTAAATTCAGGATCCTTG+AGG | 0.623114 | 2.3:+58206183 | None:intergenic |
AATTTGAGCGTGATGGCAAG+TGG | 0.631289 | 2.3:-58206005 | MS.gene02749:CDS |
ATATCTCTTGAAACTTGAAG+AGG | 0.637010 | 2.3:+58205855 | None:intergenic |
TTGACCGAAGGTATAAAACA+TGG | 0.643379 | 2.3:+58206162 | None:intergenic |
GATAACTCCAGCTTTAAGTG+CGG | 0.649462 | 2.3:+58206235 | None:intergenic |
AGCTGGAGTTATCAAGCATG+GGG | 0.657193 | 2.3:-58206225 | MS.gene02749:CDS |
ACTCCAGCATATTCAGACAG+AGG | 0.701760 | 2.3:-58202908 | MS.gene02749:CDS |
TAAATGGCGTACGATCCTCA+AGG | 0.711423 | 2.3:-58206198 | MS.gene02749:CDS |
TTATCAGGCACCAATACACG+AGG | 0.743899 | 2.3:-58205937 | MS.gene02749:CDS |
TGAAGCGGAAGCCCTCATGG+CGG | 0.749745 | 2.3:-58202720 | MS.gene02749:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAATAAAATAAAATAATT+GGG | + | chr2.3:58202727-58202746 | None:intergenic | 0.0% |
!! | AATATCTTAGAAAATTTATT+GGG | - | chr2.3:58203633-58203652 | MS.gene02749:intron | 10.0% |
!!! | ATTTAGAATTAGAAAAAATA+AGG | - | chr2.3:58205724-58205743 | MS.gene02749:intron | 10.0% |
!! | CTATAACTTAATACATTAAT+AGG | - | chr2.3:58205960-58205979 | MS.gene02749:CDS | 15.0% |
!! | GAATATCTTAGAAAATTTAT+TGG | - | chr2.3:58203632-58203651 | MS.gene02749:intron | 15.0% |
!! | GATTACATATGATATTATTT+GGG | - | chr2.3:58206003-58206022 | MS.gene02749:CDS | 15.0% |
!! | TAAATAAATGATTCCTTTAT+AGG | + | chr2.3:58203359-58203378 | None:intergenic | 15.0% |
!!! | AATTTGAGATTTTATTTCAT+GGG | - | chr2.3:58205538-58205557 | MS.gene02749:intron | 15.0% |
!! | ATTAAGTTATAGTATGACAA+AGG | + | chr2.3:58205952-58205971 | None:intergenic | 20.0% |
!! | GATTGTAATTTATTACTCTA+GGG | + | chr2.3:58203951-58203970 | None:intergenic | 20.0% |
!! | GGATTACATATGATATTATT+TGG | - | chr2.3:58206002-58206021 | MS.gene02749:CDS | 20.0% |
!! | GTAATGAATTGAATTAATGT+TGG | - | chr2.3:58202426-58202445 | MS.gene02749:intron | 20.0% |
!! | TAAATGTATAAGACTAAATC+AGG | + | chr2.3:58205457-58205476 | None:intergenic | 20.0% |
!! | TATAAAACATGGTTAAATTC+AGG | + | chr2.3:58202344-58202363 | None:intergenic | 20.0% |
!! | TATTTATCTTGATCAACTAT+TGG | - | chr2.3:58203126-58203145 | MS.gene02749:intron | 20.0% |
!! | TCTATGATTAGTACAAATAT+GGG | - | chr2.3:58203758-58203777 | MS.gene02749:intron | 20.0% |
!! | TGATTGTAATTTATTACTCT+AGG | + | chr2.3:58203952-58203971 | None:intergenic | 20.0% |
!! | TTCTATGATTAGTACAAATA+TGG | - | chr2.3:58203757-58203776 | MS.gene02749:intron | 20.0% |
!! | TTTAAGTCTACATTAGAAAA+TGG | + | chr2.3:58205394-58205413 | None:intergenic | 20.0% |
!! | TTTGTACTAATCATAGAATA+TGG | + | chr2.3:58203755-58203774 | None:intergenic | 20.0% |
!!! | AAATAATTTTATAGTGCAGT+CGG | - | chr2.3:58203187-58203206 | MS.gene02749:intron | 20.0% |
!!! | ATACACATCTATTTGAAATA+GGG | - | chr2.3:58205267-58205286 | MS.gene02749:intron | 20.0% |
!!! | ATTTTCTTCTATACAATTCT+AGG | + | chr2.3:58204019-58204038 | None:intergenic | 20.0% |
!!! | CAATTTGAGATTTTATTTCA+TGG | - | chr2.3:58205537-58205556 | MS.gene02749:intron | 20.0% |
!!! | TTCTAATCATTTTAGATGAT+CGG | + | chr2.3:58206097-58206116 | None:intergenic | 20.0% |
! | AAAAAACTTAAGACTCACAT+TGG | - | chr2.3:58204952-58204971 | MS.gene02749:intron | 25.0% |
! | AATAAAATAATCTCAGGACA+AGG | - | chr2.3:58205125-58205144 | MS.gene02749:intron | 25.0% |
! | AATCCTATTCAATTCTTGAT+GGG | - | chr2.3:58202912-58202931 | MS.gene02749:CDS | 25.0% |
! | ATAAAATAATCTCAGGACAA+GGG | - | chr2.3:58205126-58205145 | MS.gene02749:intron | 25.0% |
! | ATCTAAATGTTTCGTTATGT+GGG | - | chr2.3:58202463-58202482 | MS.gene02749:intron | 25.0% |
! | ATCTTAGAAAATTTATTGGG+AGG | - | chr2.3:58203636-58203655 | MS.gene02749:intron | 25.0% |
! | ATTAAAATTCCACTATGCTA+TGG | + | chr2.3:58202807-58202826 | None:intergenic | 25.0% |
! | CAAAACAAGATAATGAAATC+AGG | + | chr2.3:58203294-58203313 | None:intergenic | 25.0% |
! | CATCAACATTATTATTGGAA+GGG | - | chr2.3:58205637-58205656 | MS.gene02749:intron | 25.0% |
! | CATTTATTGTGAGCTATATT+TGG | - | chr2.3:58205471-58205490 | MS.gene02749:intron | 25.0% |
! | CTTCCAATAATAATGTTGAT+GGG | + | chr2.3:58205638-58205657 | None:intergenic | 25.0% |
! | GATATTGTCTTGTAAATGAT+AGG | + | chr2.3:58203984-58204003 | None:intergenic | 25.0% |
! | TAGATATAGCTTCCATTATA+AGG | + | chr2.3:58203411-58203430 | None:intergenic | 25.0% |
! | TAGATTCTCTGATTGAAATA+CGG | - | chr2.3:58202886-58202905 | MS.gene02749:CDS | 25.0% |
! | TAGCTGAATAAAATAATCTC+AGG | - | chr2.3:58205119-58205138 | MS.gene02749:intron | 25.0% |
! | TATACCAATTATATGACTGT+AGG | - | chr2.3:58205055-58205074 | MS.gene02749:CDS | 25.0% |
! | TATGGAAGAGCAAATAAAAT+TGG | + | chr2.3:58206033-58206052 | None:intergenic | 25.0% |
! | TATTGTAAGTTTGCATTAGA+TGG | + | chr2.3:58204671-58204690 | None:intergenic | 25.0% |
! | TGAATTGTTATATGGTCATA+TGG | - | chr2.3:58203834-58203853 | MS.gene02749:intron | 25.0% |
! | TGACCATATAACAATTCAAA+AGG | + | chr2.3:58203832-58203851 | None:intergenic | 25.0% |
! | TTCTAATTCTAAATCGATCT+CGG | + | chr2.3:58205718-58205737 | None:intergenic | 25.0% |
!! | ACATTTAGATCCAGATTTTA+CGG | + | chr2.3:58202453-58202472 | None:intergenic | 25.0% |
!! | CATACACATCTATTTGAAAT+AGG | - | chr2.3:58205266-58205285 | MS.gene02749:intron | 25.0% |
!! | CTACCTTTTGAATTGTTATA+TGG | - | chr2.3:58203826-58203845 | MS.gene02749:intron | 25.0% |
!! | GCTTATTTATTCATTTGTTG+TGG | - | chr2.3:58202404-58202423 | MS.gene02749:intron | 25.0% |
!! | TACACATCTATTTGAAATAG+GGG | - | chr2.3:58205268-58205287 | MS.gene02749:intron | 25.0% |
!! | TTAACCATGTTTTATACCTT+CGG | - | chr2.3:58202348-58202367 | MS.gene02749:intron | 25.0% |
!! | TTCATCATTTTGTATTCTGT+AGG | - | chr2.3:58204526-58204545 | MS.gene02749:intron | 25.0% |
!! | TTTGTACTGATCATAGAATA+TGG | + | chr2.3:58203667-58203686 | None:intergenic | 25.0% |
!!! | TAATACCATCTAGTGTTTTT+TGG | + | chr2.3:58204849-58204868 | None:intergenic | 25.0% |
!!! | TGGGTTGAATTTTATATTTC+AGG | - | chr2.3:58205557-58205576 | MS.gene02749:intron | 25.0% |
!!! | TTAGAAATGTGATTTGTTTG+CGG | - | chr2.3:58206164-58206183 | MS.gene02749:CDS | 25.0% |
AACTTGGTTCATGGAATATA+TGG | + | chr2.3:58204898-58204917 | None:intergenic | 30.0% | |
AAGAAAATTACAACTCGACA+AGG | + | chr2.3:58205237-58205256 | None:intergenic | 30.0% | |
AAGCAGAACAAATAAAAGTG+TGG | + | chr2.3:58203507-58203526 | None:intergenic | 30.0% | |
AAGTGTTATAGCATTGCATT+TGG | - | chr2.3:58204441-58204460 | MS.gene02749:intron | 30.0% | |
ACACCCATCAACATTATTAT+TGG | - | chr2.3:58205632-58205651 | MS.gene02749:intron | 30.0% | |
ACATAAAACTTCTAATGTCG+CGG | - | chr2.3:58204990-58205009 | MS.gene02749:intron | 30.0% | |
AGATTCTCTGATTGAAATAC+GGG | - | chr2.3:58202887-58202906 | MS.gene02749:CDS | 30.0% | |
ATATCTCTTGAAACTTGAAG+AGG | + | chr2.3:58202662-58202681 | None:intergenic | 30.0% | |
ATTGTTATATGGTCATATGG+AGG | - | chr2.3:58203837-58203856 | MS.gene02749:intron | 30.0% | |
CCATCAACATTATTATTGGA+AGG | - | chr2.3:58205636-58205655 | MS.gene02749:intron | 30.0% | |
CCTTCCAATAATAATGTTGA+TGG | + | chr2.3:58205639-58205658 | None:intergenic | 30.0% | |
GAATCCTATTCAATTCTTGA+TGG | - | chr2.3:58202911-58202930 | MS.gene02749:CDS | 30.0% | |
GATCTAAATGTTTCGTTATG+TGG | - | chr2.3:58202462-58202481 | MS.gene02749:intron | 30.0% | |
TAAAATAATCTCAGGACAAG+GGG | - | chr2.3:58205127-58205146 | MS.gene02749:intron | 30.0% | |
TAACTGTGTTTACGTTATAC+AGG | - | chr2.3:58203377-58203396 | MS.gene02749:intron | 30.0% | |
TCATCATCACTTAGAGAAAA+AGG | + | chr2.3:58202623-58202642 | None:intergenic | 30.0% | |
TCTCACATTAGCTAGAAATA+AGG | - | chr2.3:58204756-58204775 | MS.gene02749:intron | 30.0% | |
TGAAGCTAATTTGAGCTAAT+TGG | + | chr2.3:58204232-58204251 | None:intergenic | 30.0% | |
TTGAAATAGCATCATAGATC+AGG | + | chr2.3:58204357-58204376 | None:intergenic | 30.0% | |
! | AAAAAGCTCTAGTATAAGGT+TGG | - | chr2.3:58202700-58202719 | MS.gene02749:CDS | 30.0% |
! | AAAAGCTCTAGTATAAGGTT+GGG | - | chr2.3:58202701-58202720 | MS.gene02749:CDS | 30.0% |
! | AACCTTATACTAGAGCTTTT+TGG | + | chr2.3:58202701-58202720 | None:intergenic | 30.0% |
! | AAGGCTCTATGAAATTTTAC+AGG | - | chr2.3:58205667-58205686 | MS.gene02749:intron | 30.0% |
! | ACCTTATACTAGAGCTTTTT+GGG | + | chr2.3:58202700-58202719 | None:intergenic | 30.0% |
! | AGGCTCTATGAAATTTTACA+GGG | - | chr2.3:58205668-58205687 | MS.gene02749:intron | 30.0% |
! | ATATCTAGCTTGAATGAACT+TGG | - | chr2.3:58203424-58203443 | MS.gene02749:intron | 30.0% |
! | CATGTTGTTATTCTAACTTC+AGG | - | chr2.3:58203543-58203562 | MS.gene02749:intron | 30.0% |
! | GTTTTGCGTGAATCATATAA+AGG | - | chr2.3:58203308-58203327 | MS.gene02749:intron | 30.0% |
! | TTGATTTTGCTAGCTAAGTT+GGG | - | chr2.3:58204137-58204156 | MS.gene02749:intron | 30.0% |
! | TTGGATGCTATTCTCATTTT+TGG | - | chr2.3:58205490-58205509 | MS.gene02749:intron | 30.0% |
!! | AAGATGCTTGGATTAGTATT+AGG | - | chr2.3:58204722-58204741 | MS.gene02749:intron | 30.0% |
!! | CAATTCTAGGACTATAAACA+AGG | + | chr2.3:58204006-58204025 | None:intergenic | 30.0% |
!! | CGACATTAGAAGTTTTATGT+AGG | + | chr2.3:58204990-58205009 | None:intergenic | 30.0% |
!! | TTTGATTTTGCTAGCTAAGT+TGG | - | chr2.3:58204136-58204155 | MS.gene02749:intron | 30.0% |
!!! | AGTAGTGACTTTTTTCTTGA+AGG | - | chr2.3:58205198-58205217 | MS.gene02749:intron | 30.0% |
AACCATTGCTTCTTTCATTG+AGG | - | chr2.3:58203462-58203481 | MS.gene02749:intron | 35.0% | |
AATAGGTGAGATCATCTTAG+TGG | + | chr2.3:58203916-58203935 | None:intergenic | 35.0% | |
ACACTAACAAACTTGGTTCA+TGG | + | chr2.3:58204907-58204926 | None:intergenic | 35.0% | |
ACTAAGATGATCTCACCTAT+TGG | - | chr2.3:58203915-58203934 | MS.gene02749:CDS | 35.0% | |
AGATGTTCGAACGTAATCAA+GGG | - | chr2.3:58202990-58203009 | MS.gene02749:intron | 35.0% | |
AGTGTCTATCCAGACATTAT+TGG | - | chr2.3:58204868-58204887 | MS.gene02749:intron | 35.0% | |
ATAGGTGAGATCATCTTAGT+GGG | + | chr2.3:58203915-58203934 | None:intergenic | 35.0% | |
ATGAATGATCTTAACACGCT+TGG | + | chr2.3:58203247-58203266 | None:intergenic | 35.0% | |
CAACATTATTATTGGAAGGG+AGG | - | chr2.3:58205640-58205659 | MS.gene02749:intron | 35.0% | |
CAAGAATACAAGGAAAGCAA+TGG | + | chr2.3:58203271-58203290 | None:intergenic | 35.0% | |
CAGACCTACAGTCATATAAT+TGG | + | chr2.3:58205062-58205081 | None:intergenic | 35.0% | |
CAGAGTTTGTGTAATGTGTA+GGG | + | chr2.3:58205034-58205053 | None:intergenic | 35.0% | |
CGAAATTATCTTCCACTTGA+GGG | + | chr2.3:58202970-58202989 | None:intergenic | 35.0% | |
CGGCAATTGTCTTTCAATTA+GGG | - | chr2.3:58203207-58203226 | MS.gene02749:intron | 35.0% | |
CGTTTCGGAAACATTCTATT+AGG | - | chr2.3:58206197-58206216 | MS.gene02749:CDS | 35.0% | |
CTAAGATGATCTCACCTATT+GGG | - | chr2.3:58203916-58203935 | MS.gene02749:CDS | 35.0% | |
CTCACTTGTCTTCAACATAA+TGG | + | chr2.3:58204209-58204228 | None:intergenic | 35.0% | |
GAAATTATCTTCCACTTGAG+GGG | + | chr2.3:58202969-58202988 | None:intergenic | 35.0% | |
GATCCCATCAAGAATTGAAT+AGG | + | chr2.3:58202918-58202937 | None:intergenic | 35.0% | |
GTTATAGCATTGCATTTGGT+TGG | - | chr2.3:58204445-58204464 | MS.gene02749:intron | 35.0% | |
TAATGTTGGACCGTAAAATC+TGG | - | chr2.3:58202440-58202459 | MS.gene02749:intron | 35.0% | |
TACCTCAATGAAAGAAGCAA+TGG | + | chr2.3:58203467-58203486 | None:intergenic | 35.0% | |
TATTCTGTAGGACCATTACT+GGG | - | chr2.3:58204538-58204557 | MS.gene02749:intron | 35.0% | |
TCAATCAGAGAATCTAACTG+AGG | + | chr2.3:58202882-58202901 | None:intergenic | 35.0% | |
TCGAAATTATCTTCCACTTG+AGG | + | chr2.3:58202971-58202990 | None:intergenic | 35.0% | |
TCGGCAATTGTCTTTCAATT+AGG | - | chr2.3:58203206-58203225 | MS.gene02749:intron | 35.0% | |
TCGGTCAAATGTTGATCTAA+AGG | - | chr2.3:58202367-58202386 | MS.gene02749:intron | 35.0% | |
TGAAATCAGGCAAGAATACA+AGG | + | chr2.3:58203281-58203300 | None:intergenic | 35.0% | |
TGTGTTTACGTTATACAGGT+TGG | - | chr2.3:58203381-58203400 | MS.gene02749:intron | 35.0% | |
TGTTTCTTATATACAGCCGT+TGG | - | chr2.3:58205334-58205353 | MS.gene02749:intron | 35.0% | |
TTAGATCAACATTTGACCGA+AGG | + | chr2.3:58202367-58202386 | None:intergenic | 35.0% | |
TTGGTTCATGGAATATATGG+TGG | + | chr2.3:58204895-58204914 | None:intergenic | 35.0% | |
TTGTAGAAGCTGAAAGGAAA+AGG | - | chr2.3:58205880-58205899 | MS.gene02749:CDS | 35.0% | |
TTGTGTAATGTGTAGGGTTT+GGG | + | chr2.3:58205028-58205047 | None:intergenic | 35.0% | |
TTTGTGTAATGTGTAGGGTT+TGG | + | chr2.3:58205029-58205048 | None:intergenic | 35.0% | |
! | AAGCTTTTGTAGAAGCTGAA+AGG | - | chr2.3:58205874-58205893 | MS.gene02749:CDS | 35.0% |
! | AATGAAAAGGGTGCATTATC+AGG | - | chr2.3:58202562-58202581 | MS.gene02749:intron | 35.0% |
! | CAGAGCTAGTTTGAAAAAGA+AGG | - | chr2.3:58204172-58204191 | MS.gene02749:intron | 35.0% |
! | CAGGTTGGATAACCTTATAA+TGG | - | chr2.3:58203396-58203415 | MS.gene02749:intron | 35.0% |
! | GGACATGTAGAAGATTCTTT+TGG | - | chr2.3:58205981-58206000 | MS.gene02749:CDS | 35.0% |
! | GTTTTGCTTGCATCCTATAA+AGG | - | chr2.3:58203343-58203362 | MS.gene02749:intron | 35.0% |
! | TGATTTTGCTAGCTAAGTTG+GGG | - | chr2.3:58204138-58204157 | MS.gene02749:intron | 35.0% |
! | TTAGCTCAAATTAGCTTCAG+TGG | - | chr2.3:58204233-58204252 | MS.gene02749:intron | 35.0% |
! | TTGACCGAAGGTATAAAACA+TGG | + | chr2.3:58202355-58202374 | None:intergenic | 35.0% |
!! | AAATGTGATTTGTTTGCGGA+AGG | - | chr2.3:58206168-58206187 | MS.gene02749:CDS | 35.0% |
!! | AACCAAGTTTGTTAGTGTTG+GGG | - | chr2.3:58204909-58204928 | MS.gene02749:intron | 35.0% |
!! | GAACCAAGTTTGTTAGTGTT+GGG | - | chr2.3:58204908-58204927 | MS.gene02749:intron | 35.0% |
!! | GTTGATCGGCTTTTTGAAAA+AGG | - | chr2.3:58203066-58203085 | MS.gene02749:intron | 35.0% |
!! | TCTTCTGACCATTTTTGCTT+AGG | + | chr2.3:58202251-58202270 | None:intergenic | 35.0% |
!! | TGAACCAAGTTTGTTAGTGT+TGG | - | chr2.3:58204907-58204926 | MS.gene02749:intron | 35.0% |
!! | TTGCTTAACTCTAAGATGCT+TGG | - | chr2.3:58204710-58204729 | MS.gene02749:intron | 35.0% |
AAAGCTGGAGTTATCAAGCA+TGG | - | chr2.3:58202287-58202306 | MS.gene02749:intron | 40.0% | |
AAATAGCAGCCATAGCATAG+TGG | - | chr2.3:58202795-58202814 | MS.gene02749:CDS | 40.0% | |
AAGCAGAGCTTATAAAGCCT+AGG | - | chr2.3:58204781-58204800 | MS.gene02749:intron | 40.0% | |
AAGCCAAGATTTACCGTCTT+TGG | + | chr2.3:58205923-58205942 | None:intergenic | 40.0% | |
AAGCTGGAGTTATCAAGCAT+GGG | - | chr2.3:58202288-58202307 | MS.gene02749:intron | 40.0% | |
AATACACGAGGACAACTCTA+TGG | - | chr2.3:58202589-58202608 | MS.gene02749:intron | 40.0% | |
AATACTCGCATCTATCACCT+AGG | - | chr2.3:58203150-58203169 | MS.gene02749:intron | 40.0% | |
AGAGATATGCCGCAAATTTC+TGG | - | chr2.3:58202674-58202693 | MS.gene02749:CDS | 40.0% | |
AGCCAAGATTTACCGTCTTT+GGG | + | chr2.3:58205922-58205941 | None:intergenic | 40.0% | |
AGGAGAAAAACACCCAAAGA+CGG | - | chr2.3:58205907-58205926 | MS.gene02749:CDS | 40.0% | |
ATACTCGCATCTATCACCTA+GGG | - | chr2.3:58203151-58203170 | MS.gene02749:intron | 40.0% | |
ATAGAGTTGTCCTCGTGTAT+TGG | + | chr2.3:58202590-58202609 | None:intergenic | 40.0% | |
ATATGGTCATATGGAGGTCA+TGG | - | chr2.3:58203843-58203862 | MS.gene02749:intron | 40.0% | |
ATCTCGTGGAAAACTGATCA+AGG | - | chr2.3:58204610-58204629 | MS.gene02749:intron | 40.0% | |
CCAGAGTTTGTGTAATGTGT+AGG | + | chr2.3:58205035-58205054 | None:intergenic | 40.0% | |
CCTACACATTACACAAACTC+TGG | - | chr2.3:58205032-58205051 | MS.gene02749:intron | 40.0% | |
CTCCAGCAAACCAATTTCTA+CGG | + | chr2.3:58204816-58204835 | None:intergenic | 40.0% | |
GACACTTTACCACTGTTGAT+CGG | - | chr2.3:58203052-58203071 | MS.gene02749:intron | 40.0% | |
GAGAGATGGTGAAACGAATA+AGG | - | chr2.3:58205155-58205174 | MS.gene02749:intron | 40.0% | |
GAGATGTTCGAACGTAATCA+AGG | - | chr2.3:58202989-58203008 | MS.gene02749:intron | 40.0% | |
GCAAAAATGGTCAGAAGAAG+AGG | - | chr2.3:58202253-58202272 | MS.gene02749:intron | 40.0% | |
GGGTTGTTGGATAGGATAAA+TGG | - | chr2.3:58202483-58202502 | MS.gene02749:intron | 40.0% | |
GGTTAAATTCAGGATCCTTG+AGG | + | chr2.3:58202334-58202353 | None:intergenic | 40.0% | |
GTATTCTGTAGGACCATTAC+TGG | - | chr2.3:58204537-58204556 | MS.gene02749:intron | 40.0% | |
TAGGTGAGATCATCTTAGTG+GGG | + | chr2.3:58203914-58203933 | None:intergenic | 40.0% | |
TATGGTCATATGGAGGTCAT+GGG | - | chr2.3:58203844-58203863 | MS.gene02749:intron | 40.0% | |
TATGGTGGTCCAATAATGTC+TGG | + | chr2.3:58204880-58204899 | None:intergenic | 40.0% | |
TCAGGCCAAAAAACACTAGA+TGG | - | chr2.3:58204841-58204860 | MS.gene02749:intron | 40.0% | |
TGATGGGATCAGATCAGAAA+CGG | - | chr2.3:58202928-58202947 | MS.gene02749:CDS | 40.0% | |
TGCGGAAGGATTTATCGTTT+CGG | - | chr2.3:58206182-58206201 | MS.gene02749:CDS | 40.0% | |
TGGGTGTTCCTAAGCAAAAA+TGG | - | chr2.3:58202240-58202259 | MS.gene02749:intron | 40.0% | |
TGTGTAATGTGTAGGGTTTG+GGG | + | chr2.3:58205027-58205046 | None:intergenic | 40.0% | |
TTATTGGAAGGGAGGCAAAA+AGG | - | chr2.3:58205648-58205667 | MS.gene02749:intron | 40.0% | |
TTCAAAAAGCCGATCAACAG+TGG | + | chr2.3:58203064-58203083 | None:intergenic | 40.0% | |
TTCTAAATCGATCTCGGACT+TGG | + | chr2.3:58205712-58205731 | None:intergenic | 40.0% | |
TTGCAAATTATCCCCTCAAG+TGG | - | chr2.3:58202955-58202974 | MS.gene02749:intron | 40.0% | |
TTTGTTCTATTCTGCACCCT+AGG | + | chr2.3:58203170-58203189 | None:intergenic | 40.0% | |
! | CTGAAGTATCTTACATCTCG+TGG | - | chr2.3:58204596-58204615 | MS.gene02749:intron | 40.0% |
! | GCCCAAAAAGCTCTAGTATA+AGG | - | chr2.3:58202696-58202715 | MS.gene02749:CDS | 40.0% |
! | TAGGCTTTATAAGCTCTGCT+TGG | + | chr2.3:58204782-58204801 | None:intergenic | 40.0% |
! | TATATACAGCCGTTGGTTGT+GGG | - | chr2.3:58205341-58205360 | MS.gene02749:intron | 40.0% |
! | TCTAGCTTGAATGAACTTGG+TGG | - | chr2.3:58203427-58203446 | MS.gene02749:intron | 40.0% |
! | TGTTTCGTTATGTGGGTTGT+TGG | - | chr2.3:58202470-58202489 | MS.gene02749:intron | 40.0% |
! | TTATATACAGCCGTTGGTTG+TGG | - | chr2.3:58205340-58205359 | MS.gene02749:intron | 40.0% |
! | TTATATTTCAGGTGAAGCGC+AGG | - | chr2.3:58205568-58205587 | MS.gene02749:intron | 40.0% |
!! | AAACTAGCTCTGCTTCATGA+TGG | + | chr2.3:58204164-58204183 | None:intergenic | 40.0% |
!! | ACCAAGTTTGTTAGTGTTGG+GGG | - | chr2.3:58204910-58204929 | MS.gene02749:intron | 40.0% |
!! | AGTGGAAAATGGGCTAGATA+TGG | - | chr2.3:58205091-58205110 | MS.gene02749:CDS | 40.0% |
!! | CGGCTTTTTGAAAAAGGATG+AGG | - | chr2.3:58203072-58203091 | MS.gene02749:intron | 40.0% |
!! | CTTTTTGGGCCAGAAATTTG+CGG | + | chr2.3:58202686-58202705 | None:intergenic | 40.0% |
!! | GATAACTCCAGCTTTAAGTG+CGG | + | chr2.3:58202282-58202301 | None:intergenic | 40.0% |
!! | TATTTGAAATAGGGGTGCTG+TGG | - | chr2.3:58205276-58205295 | MS.gene02749:intron | 40.0% |
AACCACAAGACACAGTAACC+AGG | + | chr2.3:58204310-58204329 | None:intergenic | 45.0% | |
AACCTGGTTACTGTGTCTTG+TGG | - | chr2.3:58204305-58204324 | MS.gene02749:intron | 45.0% | |
AATCTCAGGACAAGGGGATT+TGG | - | chr2.3:58205133-58205152 | MS.gene02749:intron | 45.0% | |
AATTTGAGCGTGATGGCAAG+TGG | - | chr2.3:58202509-58202528 | MS.gene02749:intron | 45.0% | |
ACCCCCAACACTAACAAACT+TGG | + | chr2.3:58204914-58204933 | None:intergenic | 45.0% | |
ACTCACATTGGCGTGAGATA+AGG | - | chr2.3:58204964-58204983 | MS.gene02749:intron | 45.0% | |
ACTCCAGCATATTCAGACAG+AGG | - | chr2.3:58205606-58205625 | MS.gene02749:intron | 45.0% | |
AGATGATCTCACCTATTGGG+AGG | - | chr2.3:58203919-58203938 | MS.gene02749:CDS | 45.0% | |
AGCCAAAGGGAGCAATGAAA+AGG | - | chr2.3:58202549-58202568 | MS.gene02749:intron | 45.0% | |
AGCTGAAAGGAAAAGGCTGA+AGG | - | chr2.3:58205887-58205906 | MS.gene02749:CDS | 45.0% | |
AGCTGGAGTTATCAAGCATG+GGG | - | chr2.3:58202289-58202308 | MS.gene02749:intron | 45.0% | |
ATGGCGAAATTTGAGCGTGA+TGG | - | chr2.3:58202502-58202521 | MS.gene02749:intron | 45.0% | |
CACAGTAACCAGGTTTCAGA+AGG | + | chr2.3:58204300-58204319 | None:intergenic | 45.0% | |
CACCCAAAGACGGTAAATCT+TGG | - | chr2.3:58205917-58205936 | MS.gene02749:CDS | 45.0% | |
CTAATGTCGCGGCAAATCTT+AGG | - | chr2.3:58205001-58205020 | MS.gene02749:intron | 45.0% | |
CTGTCTGAATATGCTGGAGT+AGG | + | chr2.3:58205606-58205625 | None:intergenic | 45.0% | |
CTTCCTCTGTCTGAATATGC+TGG | + | chr2.3:58205612-58205631 | None:intergenic | 45.0% | |
GAGTTCGTGGAGTGGAAAAT+GGG | - | chr2.3:58205081-58205100 | MS.gene02749:CDS | 45.0% | |
GCAAACCAATTTCTACGGTG+AGG | + | chr2.3:58204811-58204830 | None:intergenic | 45.0% | |
GCAATCCTCACCGTAGAAAT+TGG | - | chr2.3:58204803-58204822 | MS.gene02749:intron | 45.0% | |
GCCAAAGGGAGCAATGAAAA+GGG | - | chr2.3:58202550-58202569 | MS.gene02749:intron | 45.0% | |
TAAATGGCGTACGATCCTCA+AGG | - | chr2.3:58202316-58202335 | MS.gene02749:intron | 45.0% | |
TAACCAGGTTTCAGAAGGCA+TGG | + | chr2.3:58204295-58204314 | None:intergenic | 45.0% | |
TACACCAGCAAGCATATCAG+AGG | + | chr2.3:58203874-58203893 | None:intergenic | 45.0% | |
TCCATAAAACCTGCTTGCGA+GGG | - | chr2.3:58206047-58206066 | MS.gene02749:intron | 45.0% | |
TGAGTTCGTGGAGTGGAAAA+TGG | - | chr2.3:58205080-58205099 | MS.gene02749:CDS | 45.0% | |
TTATCAGGCACCAATACACG+AGG | - | chr2.3:58202577-58202596 | MS.gene02749:intron | 45.0% | |
TTCCATAAAACCTGCTTGCG+AGG | - | chr2.3:58206046-58206065 | MS.gene02749:intron | 45.0% | |
! | AATCGATCTCGGACTTGGTA+TGG | + | chr2.3:58205707-58205726 | None:intergenic | 45.0% |
! | ACCCTTTTCATTGCTCCCTT+TGG | + | chr2.3:58202554-58202573 | None:intergenic | 45.0% |
! | CGTTATGTGGGTTGTTGGAT+AGG | - | chr2.3:58202475-58202494 | MS.gene02749:intron | 45.0% |
! | CTGATATGCTTGCTGGTGTA+AGG | - | chr2.3:58203874-58203893 | MS.gene02749:intron | 45.0% |
! | GTCACTTTAGCAACCACACA+AGG | - | chr2.3:58203028-58203047 | MS.gene02749:intron | 45.0% |
! | TGGTAAAGTGTCACCTTGTG+TGG | + | chr2.3:58203044-58203063 | None:intergenic | 45.0% |
!! | CACCGTAGAAATTGGTTTGC+TGG | - | chr2.3:58204811-58204830 | MS.gene02749:intron | 45.0% |
!! | TGGTTTGCTGGAGTTGAATC+AGG | - | chr2.3:58204823-58204842 | MS.gene02749:intron | 45.0% |
!!! | AGCAGCTTTTTGAAGTCAGC+AGG | + | chr2.3:58204566-58204585 | None:intergenic | 45.0% |
!! | CAAAAATAAAATAAAATAAT+TGG | + | chr2.3:58202728-58202747 | None:intergenic | 5.0% |
!!! | TTATTTTTGTTTTTTTAATA+CGG | - | chr2.3:58202739-58202758 | MS.gene02749:CDS | 5.0% |
AAGGTCCATGTCTGCACAAG+AGG | - | chr2.3:58205743-58205762 | MS.gene02749:intron | 50.0% | |
ACAGCCTCTGATATGCTTGC+TGG | - | chr2.3:58203867-58203886 | MS.gene02749:intron | 50.0% | |
GACAAGGGGATTTGGAGAGA+TGG | - | chr2.3:58205141-58205160 | MS.gene02749:intron | 50.0% | |
GAGGAATCCGCACTTAAAGC+TGG | - | chr2.3:58202272-58202291 | MS.gene02749:intron | 50.0% | |
GGAGTTATCAAGCATGGGGT+GGG | - | chr2.3:58202293-58202312 | MS.gene02749:intron | 50.0% | |
TCAAGCATGGGGTGGGTAAA+TGG | - | chr2.3:58202300-58202319 | MS.gene02749:intron | 50.0% | |
TGAATCCTGACGCAAGAGTG+AGG | - | chr2.3:58203800-58203819 | MS.gene02749:intron | 50.0% | |
TGACTGTAGGTCTGAGTTCG+TGG | - | chr2.3:58205068-58205087 | MS.gene02749:CDS | 50.0% | |
TGGAGTTATCAAGCATGGGG+TGG | - | chr2.3:58202292-58202311 | MS.gene02749:intron | 50.0% | |
TGTATTATGCCCTCGCAAGC+AGG | + | chr2.3:58206059-58206078 | None:intergenic | 50.0% | |
TTCAGGTGAAGCGCAGGTAT+AGG | - | chr2.3:58205574-58205593 | MS.gene02749:intron | 50.0% | |
TTCTACGGTGAGGATTGCCT+AGG | + | chr2.3:58204801-58204820 | None:intergenic | 50.0% | |
!! | ACTCCATGCCTTCTGAAACC+TGG | - | chr2.3:58204289-58204308 | MS.gene02749:intron | 50.0% |
AACTGCTCGAGCAGCACATG+CGG | + | chr2.3:58205772-58205791 | None:intergenic | 55.0% | |
AGAAGCGGAGGCAGATGCAA+TGG | - | chr2.3:58205851-58205870 | MS.gene02749:CDS | 55.0% | |
AGAGGCAACAAAGGAGGCAG+AGG | - | chr2.3:58205824-58205843 | MS.gene02749:CDS | 55.0% | |
AGTCAGCAGGTGCCCAGTAA+TGG | + | chr2.3:58204553-58204572 | None:intergenic | 55.0% | |
ATCCTGACGCAAGAGTGAGG+TGG | - | chr2.3:58203803-58203822 | MS.gene02749:intron | 55.0% | |
CAGCCCAAACCCACAACCAA+CGG | + | chr2.3:58205353-58205372 | None:intergenic | 55.0% | |
GAGCGTGATGGCAAGTGGAT+GGG | - | chr2.3:58202514-58202533 | MS.gene02749:intron | 55.0% | |
GCTTCGAGGGAGAAGCCAAA+GGG | - | chr2.3:58202536-58202555 | MS.gene02749:intron | 55.0% | |
GGAGGCTGAAGAGGCAACAA+AGG | - | chr2.3:58205815-58205834 | MS.gene02749:intron | 55.0% | |
GGCTGAAGAGGCAACAAAGG+AGG | - | chr2.3:58205818-58205837 | MS.gene02749:intron | 55.0% | |
GTAGGTCTGAGTTCGTGGAG+TGG | - | chr2.3:58205073-58205092 | MS.gene02749:CDS | 55.0% | |
TAGGGCACAAGCCTCCCAAT+AGG | + | chr2.3:58203933-58203952 | None:intergenic | 55.0% | |
TGAGCGTGATGGCAAGTGGA+TGG | - | chr2.3:58202513-58202532 | MS.gene02749:intron | 55.0% | |
TGCAAGACACTCACACGCAC+AGG | + | chr2.3:58204266-58204285 | None:intergenic | 55.0% | |
TGCTCGAGCAGTTGCTGAAG+CGG | - | chr2.3:58205779-58205798 | MS.gene02749:intron | 55.0% | |
! | ACAGCCGTTGGTTGTGGGTT+TGG | - | chr2.3:58205346-58205365 | MS.gene02749:intron | 55.0% |
! | CAGCCGTTGGTTGTGGGTTT+GGG | - | chr2.3:58205347-58205366 | MS.gene02749:intron | 55.0% |
! | GCCCTCGCAAGCAGGTTTTA+TGG | + | chr2.3:58206051-58206070 | None:intergenic | 55.0% |
! | TAGTGTTGGGGGTGATGAGC+AGG | - | chr2.3:58204921-58204940 | MS.gene02749:intron | 55.0% |
AGCCACCTCACTCTTGCGTC+AGG | + | chr2.3:58203808-58203827 | None:intergenic | 60.0% | |
CTCTTCAGCCTCCGCCATGA+GGG | + | chr2.3:58205808-58205827 | None:intergenic | 60.0% | |
GGCTGCCTCTTGTGCAGACA+TGG | + | chr2.3:58205751-58205770 | None:intergenic | 60.0% | |
GGCTTCGAGGGAGAAGCCAA+AGG | - | chr2.3:58202535-58202554 | MS.gene02749:intron | 60.0% | |
TGAAGCGGAAGCCCTCATGG+CGG | - | chr2.3:58205794-58205813 | MS.gene02749:intron | 60.0% | |
TGCTGAAGCGGAAGCCCTCA+TGG | - | chr2.3:58205791-58205810 | MS.gene02749:intron | 60.0% | |
! | GGCAAGTGGATGGGCTTCGA+GGG | - | chr2.3:58202523-58202542 | MS.gene02749:intron | 60.0% |
! | TGGCAAGTGGATGGGCTTCG+AGG | - | chr2.3:58202522-58202541 | MS.gene02749:intron | 60.0% |
CCTCTTCAGCCTCCGCCATG+AGG | + | chr2.3:58205809-58205828 | None:intergenic | 65.0% | |
GGAGGCAGAGGCTGCAGAAG+CGG | - | chr2.3:58205836-58205855 | MS.gene02749:CDS | 65.0% | |
! | CCTCATGGCGGAGGCTGAAG+AGG | - | chr2.3:58205806-58205825 | MS.gene02749:intron | 65.0% |
AGCGGAAGCCCTCATGGCGG+AGG | - | chr2.3:58205797-58205816 | MS.gene02749:intron | 70.0% | |
GGCAGAGGCTGCAGAAGCGG+AGG | - | chr2.3:58205839-58205858 | MS.gene02749:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 58202239 | 58206297 | 58202239 | ID=MS.gene02749 |
chr2.3 | mRNA | 58202239 | 58206297 | 58202239 | ID=MS.gene02749.t1;Parent=MS.gene02749 |
chr2.3 | exon | 58206148 | 58206297 | 58206148 | ID=MS.gene02749.t1.exon1;Parent=MS.gene02749.t1 |
chr2.3 | CDS | 58206148 | 58206297 | 58206148 | ID=cds.MS.gene02749.t1;Parent=MS.gene02749.t1 |
chr2.3 | exon | 58205819 | 58206039 | 58205819 | ID=MS.gene02749.t1.exon2;Parent=MS.gene02749.t1 |
chr2.3 | CDS | 58205819 | 58206039 | 58205819 | ID=cds.MS.gene02749.t1;Parent=MS.gene02749.t1 |
chr2.3 | exon | 58205053 | 58205137 | 58205053 | ID=MS.gene02749.t1.exon3;Parent=MS.gene02749.t1 |
chr2.3 | CDS | 58205053 | 58205137 | 58205053 | ID=cds.MS.gene02749.t1;Parent=MS.gene02749.t1 |
chr2.3 | exon | 58203905 | 58203988 | 58203905 | ID=MS.gene02749.t1.exon4;Parent=MS.gene02749.t1 |
chr2.3 | CDS | 58203905 | 58203988 | 58203905 | ID=cds.MS.gene02749.t1;Parent=MS.gene02749.t1 |
chr2.3 | exon | 58202608 | 58202957 | 58202608 | ID=MS.gene02749.t1.exon5;Parent=MS.gene02749.t1 |
chr2.3 | CDS | 58202608 | 58202957 | 58202608 | ID=cds.MS.gene02749.t1;Parent=MS.gene02749.t1 |
chr2.3 | exon | 58202239 | 58202242 | 58202239 | ID=MS.gene02749.t1.exon6;Parent=MS.gene02749.t1 |
chr2.3 | CDS | 58202239 | 58202242 | 58202239 | ID=cds.MS.gene02749.t1;Parent=MS.gene02749.t1 |
Gene Sequence |
Protein sequence |