Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02775.t1 | AES64821.1 | 83.1 | 160 | 20 | 1 | 1 | 153 | 1 | 160 | 9.40E-63 | 249.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02775.t1 | Q9FFI0 | 35.2 | 122 | 69 | 3 | 15 | 126 | 30 | 151 | 1.8e-09 | 63.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02775.t1 | G7IMI5 | 83.1 | 160 | 20 | 1 | 1 | 153 | 1 | 160 | 6.8e-63 | 249.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene02775.t1 | TF | HB-other |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02775.t1 | MTR_2g030700 | 83.125 | 160 | 20 | 1 | 1 | 153 | 1 | 160 | 4.16e-91 | 261 |
| MS.gene02775.t1 | MTR_2g030680 | 83.125 | 160 | 20 | 1 | 1 | 153 | 1 | 160 | 1.53e-90 | 260 |
| MS.gene02775.t1 | MTR_2g030720 | 80.000 | 160 | 22 | 2 | 1 | 153 | 1 | 157 | 1.19e-86 | 250 |
| MS.gene02775.t1 | MTR_2g030660 | 50.000 | 138 | 61 | 4 | 17 | 151 | 21 | 153 | 5.54e-29 | 111 |
| MS.gene02775.t1 | MTR_4g047800 | 31.169 | 154 | 93 | 4 | 10 | 150 | 59 | 212 | 4.38e-16 | 74.7 |
| MS.gene02775.t1 | MTR_7g427710 | 32.432 | 111 | 71 | 2 | 17 | 126 | 22 | 129 | 1.44e-14 | 70.1 |
| MS.gene02775.t1 | MTR_7g427700 | 35.537 | 121 | 67 | 5 | 17 | 131 | 22 | 137 | 3.31e-14 | 68.9 |
| MS.gene02775.t1 | MTR_1g101280 | 30.612 | 147 | 88 | 4 | 15 | 148 | 60 | 205 | 8.18e-14 | 68.2 |
| MS.gene02775.t1 | MTR_2g088470 | 31.387 | 137 | 82 | 3 | 15 | 139 | 71 | 207 | 2.80e-13 | 66.6 |
| MS.gene02775.t1 | MTR_0198s0030 | 30.328 | 122 | 74 | 3 | 15 | 126 | 59 | 179 | 7.95e-13 | 65.1 |
| MS.gene02775.t1 | MTR_2g101720 | 31.148 | 122 | 73 | 3 | 15 | 125 | 143 | 264 | 8.32e-13 | 65.1 |
| MS.gene02775.t1 | MTR_6g477820 | 33.588 | 131 | 71 | 4 | 15 | 131 | 33 | 161 | 1.20e-12 | 64.7 |
| MS.gene02775.t1 | MTR_6g027290 | 32.800 | 125 | 60 | 3 | 19 | 126 | 33 | 150 | 7.69e-12 | 60.5 |
| MS.gene02775.t1 | MTR_5g029320 | 31.405 | 121 | 73 | 2 | 15 | 125 | 93 | 213 | 2.03e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 129 | 77 | 2 | 7 | 126 | 60 | 188 | 1.41e-15 | 73.2 |
| MS.gene02775.t1 | AT4G04890 | 29.677 | 155 | 95 | 4 | 9 | 149 | 60 | 214 | 4.19e-14 | 68.9 |
| MS.gene02775.t1 | AT4G04890 | 29.677 | 155 | 95 | 4 | 9 | 149 | 60 | 214 | 4.19e-14 | 68.9 |
| MS.gene02775.t1 | AT5G17320 | 35.433 | 127 | 71 | 4 | 14 | 130 | 29 | 154 | 4.46e-14 | 68.9 |
| MS.gene02775.t1 | AT4G21750 | 29.921 | 127 | 80 | 2 | 9 | 126 | 60 | 186 | 1.09e-13 | 67.8 |
| MS.gene02775.t1 | AT4G21750 | 29.921 | 127 | 80 | 2 | 9 | 126 | 60 | 186 | 1.09e-13 | 67.8 |
| MS.gene02775.t1 | AT4G21750 | 29.921 | 127 | 80 | 2 | 9 | 126 | 60 | 186 | 1.09e-13 | 67.8 |
| MS.gene02775.t1 | AT4G21750 | 29.921 | 127 | 80 | 2 | 9 | 126 | 60 | 186 | 1.09e-13 | 67.8 |
| MS.gene02775.t1 | AT1G79840 | 34.211 | 114 | 71 | 2 | 15 | 125 | 105 | 217 | 3.07e-13 | 66.2 |
| MS.gene02775.t1 | AT1G05230 | 33.333 | 138 | 80 | 3 | 7 | 132 | 60 | 197 | 3.80e-13 | 66.2 |
| MS.gene02775.t1 | AT1G17920 | 32.824 | 131 | 72 | 4 | 15 | 131 | 25 | 153 | 3.80e-13 | 66.2 |
| MS.gene02775.t1 | AT1G17920 | 32.824 | 131 | 72 | 4 | 15 | 131 | 25 | 153 | 3.80e-13 | 66.2 |
| MS.gene02775.t1 | AT1G79840 | 34.211 | 114 | 71 | 2 | 15 | 125 | 105 | 217 | 4.36e-13 | 65.9 |
| MS.gene02775.t1 | AT1G79840 | 34.211 | 114 | 71 | 2 | 15 | 125 | 134 | 246 | 4.51e-13 | 65.9 |
| MS.gene02775.t1 | AT1G79840 | 34.211 | 114 | 71 | 2 | 15 | 125 | 47 | 159 | 4.61e-13 | 65.9 |
| MS.gene02775.t1 | AT1G79840 | 34.211 | 114 | 71 | 2 | 15 | 125 | 47 | 159 | 4.61e-13 | 65.9 |
| MS.gene02775.t1 | AT1G79840 | 34.211 | 114 | 71 | 2 | 15 | 125 | 105 | 217 | 4.63e-13 | 65.9 |
| MS.gene02775.t1 | AT1G73360 | 32.824 | 131 | 72 | 4 | 15 | 131 | 36 | 164 | 1.24e-12 | 64.7 |
| MS.gene02775.t1 | AT3G03260 | 33.058 | 121 | 69 | 3 | 17 | 126 | 29 | 148 | 1.41e-12 | 64.7 |
| MS.gene02775.t1 | AT3G03260 | 33.058 | 121 | 69 | 3 | 17 | 126 | 29 | 148 | 1.47e-12 | 64.3 |
| MS.gene02775.t1 | AT4G17710 | 32.500 | 120 | 74 | 3 | 9 | 125 | 84 | 199 | 1.58e-11 | 61.6 |
| MS.gene02775.t1 | AT4G00730 | 33.113 | 151 | 84 | 4 | 9 | 142 | 132 | 282 | 1.73e-11 | 61.2 |
| MS.gene02775.t1 | AT5G46880 | 31.008 | 129 | 72 | 3 | 9 | 125 | 109 | 232 | 2.04e-11 | 61.2 |
| MS.gene02775.t1 | AT5G46880 | 31.008 | 129 | 72 | 3 | 9 | 125 | 109 | 232 | 2.04e-11 | 61.2 |
| MS.gene02775.t1 | AT5G46880 | 31.008 | 129 | 72 | 3 | 9 | 125 | 109 | 232 | 2.04e-11 | 61.2 |
| MS.gene02775.t1 | AT4G00730 | 33.113 | 151 | 84 | 4 | 9 | 142 | 132 | 282 | 2.11e-11 | 61.2 |
| MS.gene02775.t1 | AT2G32370 | 29.252 | 147 | 88 | 4 | 11 | 147 | 68 | 208 | 2.14e-11 | 61.2 |
Find 27 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCCATCTGATGATCTTTC+GGG | 0.269210 | 2.3:+59320734 | None:intergenic |
| AACCACCAGTTCACTTGTTT+TGG | 0.280631 | 2.3:+59321247 | None:intergenic |
| GGTTCCATCTGATGATCTTT+CGG | 0.329348 | 2.3:+59320733 | None:intergenic |
| AGCTGAAATTCAAATGCATT+TGG | 0.349094 | 2.3:-59321054 | MS.gene02775:CDS |
| TCCTCTTCTCCCAAGTAGCT+TGG | 0.386243 | 2.3:+59320785 | None:intergenic |
| AAAATTGAATCCAAGCTACT+TGG | 0.431354 | 2.3:-59320795 | MS.gene02775:CDS |
| AATGCATTTGGAAGCGAAAA+GGG | 0.449227 | 2.3:-59321042 | MS.gene02775:CDS |
| AAATGCATTTGGAAGCGAAA+AGG | 0.450705 | 2.3:-59321043 | MS.gene02775:CDS |
| TTTGGAAGCGAAAAGGGAAA+TGG | 0.469455 | 2.3:-59321036 | MS.gene02775:CDS |
| AACGTGAATCACGGCATGCC+TGG | 0.471704 | 2.3:+59320991 | None:intergenic |
| CTCTCACTGGAGTTGAAGTT+AGG | 0.473633 | 2.3:-59320761 | MS.gene02775:CDS |
| ATACAAAAGAGCTCAAGTTA+AGG | 0.476145 | 2.3:-59321221 | MS.gene02775:intron |
| TTGAGCCAAAACAAGTGAAC+TGG | 0.483755 | 2.3:-59321252 | MS.gene02775:CDS |
| ACAAAATAGTGTATCTTGCC+AGG | 0.484637 | 2.3:-59321009 | MS.gene02775:CDS |
| TGGCTCAAGACCAAGCTCTT+CGG | 0.488016 | 2.3:+59321267 | None:intergenic |
| TCTCAAGAATGCTACTCAAA+AGG | 0.498418 | 2.3:-59321096 | MS.gene02775:intron |
| AAATGAACTTCTGAAAGAAA+AGG | 0.522170 | 2.3:-59320949 | MS.gene02775:intron |
| ATTCTGCTGCTCAAAGATCA+AGG | 0.525922 | 2.3:-59322532 | MS.gene02775:CDS |
| GGGAGAAGAGGAACTCTCAC+TGG | 0.543091 | 2.3:-59320774 | MS.gene02775:CDS |
| TCCAAGCTACTTGGGAGAAG+AGG | 0.544024 | 2.3:-59320786 | MS.gene02775:CDS |
| AGTGAAATAGCCGAAGAGCT+TGG | 0.563271 | 2.3:-59321277 | MS.gene02775:CDS |
| GTTGTTTCAAACGTGAATCA+CGG | 0.584844 | 2.3:+59320982 | None:intergenic |
| AGCCAAAACAAGTGAACTGG+TGG | 0.610770 | 2.3:-59321249 | MS.gene02775:CDS |
| AAATTGAATCCAAGCTACTT+GGG | 0.627395 | 2.3:-59320794 | MS.gene02775:CDS |
| ATTCACGTTTGAAACAACTT+CGG | 0.629375 | 2.3:-59320977 | MS.gene02775:CDS |
| CTTCCCGAAAGATCATCAGA+TGG | 0.663295 | 2.3:-59320737 | MS.gene02775:CDS |
| CTTTGAGCAGCAGAATGACG+AGG | 0.671615 | 2.3:+59322539 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTACAATTGATTTTTTTT+TGG | - | chr2.3:59321173-59321192 | MS.gene02775:intron | 10.0% |
| !! | ACGATTAAATTTATAAAGTT+TGG | - | chr2.3:59320918-59320937 | MS.gene02775:intron | 15.0% |
| !! | ATTAATGATAATATAAGTAC+CGG | - | chr2.3:59321828-59321847 | MS.gene02775:intron | 15.0% |
| !! | TAACAAACAAAAATACAATT+AGG | + | chr2.3:59321964-59321983 | None:intergenic | 15.0% |
| !! | TTAACATTTATCATTTATGT+CGG | + | chr2.3:59321793-59321812 | None:intergenic | 15.0% |
| !!! | AATCTCCAAAAATATATTTT+TGG | - | chr2.3:59321240-59321259 | MS.gene02775:CDS | 15.0% |
| !!! | AGGTAACATATTTTTTTTTT+TGG | - | chr2.3:59322107-59322126 | MS.gene02775:intron | 15.0% |
| !!! | CTAAGATGTTTTTTTATTAA+TGG | - | chr2.3:59322427-59322446 | MS.gene02775:intron | 15.0% |
| !!! | GTATACCAAAAATATATTTT+TGG | + | chr2.3:59321248-59321267 | None:intergenic | 15.0% |
| !! | AAATCAAAATCTCCTTATTA+CGG | - | chr2.3:59320960-59320979 | MS.gene02775:CDS | 20.0% |
| !! | AATAAACCATCTAACTTTAA+TGG | + | chr2.3:59321606-59321625 | None:intergenic | 20.0% |
| !! | ACTTTATAAATTTAATCGTC+CGG | + | chr2.3:59320917-59320936 | None:intergenic | 20.0% |
| !! | ATCAACTTATTTACGTTAAA+GGG | + | chr2.3:59321760-59321779 | None:intergenic | 20.0% |
| !! | TAGTATGTTATATCAATTAG+TGG | + | chr2.3:59322169-59322188 | None:intergenic | 20.0% |
| !! | TCTAAAAAAAATCATATGCA+AGG | + | chr2.3:59320824-59320843 | None:intergenic | 20.0% |
| !! | TTAAATCCATTAAAGTTAGA+TGG | - | chr2.3:59321597-59321616 | MS.gene02775:intron | 20.0% |
| !! | TTTATCTTTCCTAATTAATC+CGG | + | chr2.3:59321850-59321869 | None:intergenic | 20.0% |
| !!! | AAGAATATCAATAGTCTTTT+GGG | + | chr2.3:59321492-59321511 | None:intergenic | 20.0% |
| !!! | ATTACTCTATAGTTTTTTGA+AGG | - | chr2.3:59321037-59321056 | MS.gene02775:CDS | 20.0% |
| !!! | GTAACGATCTTTTTATTATT+AGG | - | chr2.3:59321436-59321455 | MS.gene02775:intron | 20.0% |
| !!! | TAAGAATATCAATAGTCTTT+TGG | + | chr2.3:59321493-59321512 | None:intergenic | 20.0% |
| !!! | TTTTTTCGTTTGATAGATTT+TGG | - | chr2.3:59320860-59320879 | MS.gene02775:intron | 20.0% |
| ! | GATCAACTTATTTACGTTAA+AGG | + | chr2.3:59321761-59321780 | None:intergenic | 25.0% |
| ! | GTCAAATATTATAAATGCGT+GGG | - | chr2.3:59321338-59321357 | MS.gene02775:intron | 25.0% |
| ! | GTCTCAAAAAAAAAAGATCT+AGG | + | chr2.3:59321297-59321316 | None:intergenic | 25.0% |
| ! | TCAAATATTATAAATGCGTG+GGG | - | chr2.3:59321339-59321358 | MS.gene02775:intron | 25.0% |
| ! | TCATTAATCCATAATATGTG+CGG | + | chr2.3:59321097-59321116 | None:intergenic | 25.0% |
| ! | TGTCAAATATTATAAATGCG+TGG | - | chr2.3:59321337-59321356 | MS.gene02775:intron | 25.0% |
| ! | TTTACATTTGCCATTCAAAT+CGG | - | chr2.3:59321918-59321937 | MS.gene02775:intron | 25.0% |
| !! | AAATGAACTTCTGAAAGAAA+AGG | - | chr2.3:59322359-59322378 | MS.gene02775:intron | 25.0% |
| !! | AAATTTTTACCACCGTAATA+AGG | + | chr2.3:59320975-59320994 | None:intergenic | 25.0% |
| !! | TGAGATCTTGAGTTTAAAAT+CGG | + | chr2.3:59321728-59321747 | None:intergenic | 25.0% |
| !!! | ATATAAGTACCGGATTAATT+AGG | - | chr2.3:59321838-59321857 | MS.gene02775:intron | 25.0% |
| AAAATTGAATCCAAGCTACT+TGG | - | chr2.3:59322513-59322532 | MS.gene02775:intron | 30.0% | |
| AAATACATTCATGCAGACAA+TGG | + | chr2.3:59321065-59321084 | None:intergenic | 30.0% | |
| AAATTGAATCCAAGCTACTT+GGG | - | chr2.3:59322514-59322533 | MS.gene02775:intron | 30.0% | |
| AGCTGAAATTCAAATGCATT+TGG | - | chr2.3:59322254-59322273 | MS.gene02775:intron | 30.0% | |
| ATACAAAAGAGCTCAAGTTA+AGG | - | chr2.3:59322087-59322106 | MS.gene02775:intron | 30.0% | |
| GGCATGTAAAAAGAATTGAA+TGG | + | chr2.3:59322148-59322167 | None:intergenic | 30.0% | |
| TTTGGATAACGATTTGCAAT+TGG | - | chr2.3:59321191-59321210 | MS.gene02775:intron | 30.0% | |
| ! | ATTCACGTTTGAAACAACTT+CGG | - | chr2.3:59322331-59322350 | MS.gene02775:intron | 30.0% |
| ! | CGATCACAATCTCATTTTAT+CGG | - | chr2.3:59321528-59321547 | MS.gene02775:intron | 30.0% |
| ! | TTACGGTGGTAAAAATTTTG+TGG | - | chr2.3:59320977-59320996 | MS.gene02775:CDS | 30.0% |
| ! | TTGGTTCTCTTTAAAGATCT+AGG | - | chr2.3:59321210-59321229 | MS.gene02775:intron | 30.0% |
| ! | TTTCGTTTGATAGATTTTGG+AGG | - | chr2.3:59320863-59320882 | MS.gene02775:intron | 30.0% |
| !! | TCCTTTTATTTGATTTCGAC+CGG | - | chr2.3:59320895-59320914 | MS.gene02775:intron | 30.0% |
| !!! | TCACTTTTTTGCTTATGAGT+TGG | + | chr2.3:59322016-59322035 | None:intergenic | 30.0% |
| AAATGCATTTGGAAGCGAAA+AGG | - | chr2.3:59322265-59322284 | MS.gene02775:intron | 35.0% | |
| AATGCATTTGGAAGCGAAAA+GGG | - | chr2.3:59322266-59322285 | MS.gene02775:intron | 35.0% | |
| AATTGGATTGCACATGATTG+AGG | - | chr2.3:59321013-59321032 | MS.gene02775:CDS | 35.0% | |
| ACAAAATAGTGTATCTTGCC+AGG | - | chr2.3:59322299-59322318 | MS.gene02775:intron | 35.0% | |
| GGTCGAAATCAAATAAAAGG+AGG | + | chr2.3:59320896-59320915 | None:intergenic | 35.0% | |
| TCAAAATCTCCTTATTACGG+TGG | - | chr2.3:59320963-59320982 | MS.gene02775:CDS | 35.0% | |
| TCAATCATGTGCAATCCAAT+TGG | + | chr2.3:59321014-59321033 | None:intergenic | 35.0% | |
| TCCGGTCGAAATCAAATAAA+AGG | + | chr2.3:59320899-59320918 | None:intergenic | 35.0% | |
| TCTCAAGAATGCTACTCAAA+AGG | - | chr2.3:59322212-59322231 | MS.gene02775:intron | 35.0% | |
| TTGTCTAGATTTGTGCTTCA+TGG | - | chr2.3:59321874-59321893 | MS.gene02775:intron | 35.0% | |
| ! | GTTGTTTCAAACGTGAATCA+CGG | + | chr2.3:59322329-59322348 | None:intergenic | 35.0% |
| ! | TTATCATTTATGTCGGTGCT+AGG | + | chr2.3:59321786-59321805 | None:intergenic | 35.0% |
| !! | TATTGCAAGACCGATTTGAA+TGG | + | chr2.3:59321931-59321950 | None:intergenic | 35.0% |
| AGATTAGCGCCACCTAAAAA+TGG | - | chr2.3:59320739-59320758 | MS.gene02775:CDS | 40.0% | |
| ATTCTGCTGCTCAAAGATCA+AGG | - | chr2.3:59320776-59320795 | MS.gene02775:CDS | 40.0% | |
| GGTTCCATCTGATGATCTTT+CGG | + | chr2.3:59322578-59322597 | None:intergenic | 40.0% | |
| GTTCCATCTGATGATCTTTC+GGG | + | chr2.3:59322577-59322596 | None:intergenic | 40.0% | |
| TCCATAATATGTGCGGTCAT+TGG | + | chr2.3:59321090-59321109 | None:intergenic | 40.0% | |
| TTGAGCCAAAACAAGTGAAC+TGG | - | chr2.3:59322056-59322075 | MS.gene02775:intron | 40.0% | |
| TTTGGAAGCGAAAAGGGAAA+TGG | - | chr2.3:59322272-59322291 | MS.gene02775:intron | 40.0% | |
| ! | AACCACCAGTTCACTTGTTT+TGG | + | chr2.3:59322064-59322083 | None:intergenic | 40.0% |
| !! | CGAGGAAAAGCTCCATTTTT+AGG | + | chr2.3:59320754-59320773 | None:intergenic | 40.0% |
| !! | GGAAAAGCTCCATTTTTAGG+TGG | + | chr2.3:59320751-59320770 | None:intergenic | 40.0% |
| AGCCAAAACAAGTGAACTGG+TGG | - | chr2.3:59322059-59322078 | MS.gene02775:intron | 45.0% | |
| AGTGAAATAGCCGAAGAGCT+TGG | - | chr2.3:59322031-59322050 | MS.gene02775:intron | 45.0% | |
| CTCTCACTGGAGTTGAAGTT+AGG | - | chr2.3:59322547-59322566 | MS.gene02775:CDS | 45.0% | |
| CTTCCCGAAAGATCATCAGA+TGG | - | chr2.3:59322571-59322590 | MS.gene02775:CDS | 45.0% | |
| GCCAATGACCGCACATATTA+TGG | - | chr2.3:59321086-59321105 | MS.gene02775:CDS | 45.0% | |
| ! | GTGGAGAGTTTTTCGCCAAT+TGG | - | chr2.3:59320996-59321015 | MS.gene02775:CDS | 45.0% |
| !! | TTTAAAAAAAATAAAACTAA+TGG | + | chr2.3:59321273-59321292 | None:intergenic | 5.0% |
| CTTTGAGCAGCAGAATGACG+AGG | + | chr2.3:59320772-59320791 | None:intergenic | 50.0% | |
| TCCAAGCTACTTGGGAGAAG+AGG | - | chr2.3:59322522-59322541 | MS.gene02775:intron | 50.0% | |
| TCCTCTTCTCCCAAGTAGCT+TGG | + | chr2.3:59322526-59322545 | None:intergenic | 50.0% | |
| TGGCTCAAGACCAAGCTCTT+CGG | + | chr2.3:59322044-59322063 | None:intergenic | 50.0% | |
| AACGTGAATCACGGCATGCC+TGG | + | chr2.3:59322320-59322339 | None:intergenic | 55.0% | |
| GGGAGAAGAGGAACTCTCAC+TGG | - | chr2.3:59322534-59322553 | MS.gene02775:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 59320724 | 59322606 | 59320724 | ID=MS.gene02775 |
| chr2.3 | mRNA | 59320724 | 59322606 | 59320724 | ID=MS.gene02775.t1;Parent=MS.gene02775 |
| chr2.3 | exon | 59322524 | 59322606 | 59322524 | ID=MS.gene02775.t1.exon1;Parent=MS.gene02775.t1 |
| chr2.3 | CDS | 59322524 | 59322606 | 59322524 | ID=cds.MS.gene02775.t1;Parent=MS.gene02775.t1 |
| chr2.3 | exon | 59321222 | 59321339 | 59321222 | ID=MS.gene02775.t1.exon2;Parent=MS.gene02775.t1 |
| chr2.3 | CDS | 59321222 | 59321339 | 59321222 | ID=cds.MS.gene02775.t1;Parent=MS.gene02775.t1 |
| chr2.3 | exon | 59320950 | 59321111 | 59320950 | ID=MS.gene02775.t1.exon3;Parent=MS.gene02775.t1 |
| chr2.3 | CDS | 59320950 | 59321111 | 59320950 | ID=cds.MS.gene02775.t1;Parent=MS.gene02775.t1 |
| chr2.3 | exon | 59320724 | 59320822 | 59320724 | ID=MS.gene02775.t1.exon4;Parent=MS.gene02775.t1 |
| chr2.3 | CDS | 59320724 | 59320822 | 59320724 | ID=cds.MS.gene02775.t1;Parent=MS.gene02775.t1 |
| Gene Sequence |
| Protein sequence |