AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02776

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02776.t1 MTR_2g030660 90.881 658 50 3 1 657 1 649 0.0 1224
MS.gene02776.t1 MTR_2g030690 91.398 279 24 0 379 657 1 279 0.0 521
MS.gene02776.t1 MTR_2g030570 39.049 694 375 18 2 657 14 697 2.91e-146 441
MS.gene02776.t1 MTR_6g477820 35.402 709 392 15 7 655 21 723 4.86e-140 426
MS.gene02776.t1 MTR_2g030600 38.081 688 384 20 4 657 11 690 3.57e-137 417
MS.gene02776.t1 MTR_7g427710 35.312 674 363 18 10 655 10 638 4.83e-117 364
MS.gene02776.t1 MTR_4g047800 33.962 689 408 16 4 655 51 729 1.33e-112 355
MS.gene02776.t1 MTR_5g029320 33.613 714 391 21 2 647 73 771 9.18e-110 349
MS.gene02776.t1 MTR_2g088470 33.824 680 411 14 8 655 60 732 1.36e-109 347
MS.gene02776.t1 MTR_8g432540 33.052 711 412 20 3 655 102 806 2.52e-109 348
MS.gene02776.t1 MTR_7g076080 33.001 703 415 20 3 655 78 774 1.19e-108 346
MS.gene02776.t1 MTR_1g101280 32.766 705 396 20 17 655 58 750 1.33e-99 321
MS.gene02776.t1 MTR_2g101720 31.852 675 390 21 21 655 145 789 1.80e-94 309
MS.gene02776.t1 MTR_0198s0030 30.453 729 417 26 2 655 38 751 2.38e-91 300
MS.gene02776.t1 MTR_5g005600 30.846 697 425 20 4 656 34 717 1.53e-86 286
MS.gene02776.t1 MTR_2g030710 79.191 173 17 2 449 621 87 240 2.68e-76 244
MS.gene02776.t1 MTR_7g427690 36.658 371 205 9 181 540 60 411 1.68e-66 226
MS.gene02776.t1 MTR_2g083330 29.841 439 272 13 235 655 105 525 4.29e-47 174
MS.gene02776.t1 MTR_2g083350 29.911 448 279 12 231 657 105 538 5.94e-46 172
MS.gene02776.t1 MTR_7g427700 33.333 294 162 8 10 293 10 279 8.73e-42 157
MS.gene02776.t1 MTR_2g030720 48.466 163 73 4 1 160 1 155 1.34e-33 126
MS.gene02776.t1 MTR_2g451350 51.128 133 61 3 191 320 2 133 4.37e-32 121
MS.gene02776.t1 MTR_2g030700 46.626 163 79 5 1 160 1 158 6.43e-30 116
MS.gene02776.t1 MTR_2g030680 44.785 163 82 4 1 160 1 158 1.49e-29 115
MS.gene02776.t1 MTR_0653s0020 31.551 187 109 5 357 542 3 171 3.41e-23 98.2
MS.gene02776.t1 MTR_7g027265 41.026 117 62 1 17 126 19 135 1.81e-22 94.4
MS.gene02776.t1 MTR_2g451350 54.545 77 35 0 244 320 18 94 3.28e-21 89.0
MS.gene02776.t1 MTR_7g027605 51.648 91 41 2 264 352 2 91 1.74e-20 87.0
MS.gene02776.t1 MTR_6g027290 36.000 150 85 3 4 142 11 160 5.98e-20 88.2
MS.gene02776.t1 MTR_5g046040 43.220 118 59 2 17 126 35 152 1.98e-18 88.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02776.t1 AT1G73360 36.087 690 380 16 17 655 34 713 2.35e-133 409
MS.gene02776.t1 AT3G03260 38.177 702 371 23 4 657 9 695 1.18e-130 401
MS.gene02776.t1 AT1G17920 35.489 696 393 18 1 655 1 681 1.20e-124 385
MS.gene02776.t1 AT1G17920 35.489 696 393 18 1 655 1 681 1.20e-124 385
MS.gene02776.t1 AT5G17320 35.327 719 390 21 2 655 7 715 1.28e-120 375
MS.gene02776.t1 AT1G34650 36.561 692 375 17 22 657 23 706 1.75e-116 364
MS.gene02776.t1 AT1G05230 34.911 676 402 15 4 655 53 714 6.51e-114 358
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT1G05230 34.712 677 404 15 4 655 53 716 3.09e-113 356
MS.gene02776.t1 AT4G04890 33.859 697 406 15 4 655 49 735 7.45e-111 351
MS.gene02776.t1 AT4G04890 33.859 697 406 15 4 655 49 735 7.45e-111 351
MS.gene02776.t1 AT4G21750 33.333 705 399 15 14 655 61 757 4.15e-109 347
MS.gene02776.t1 AT4G21750 33.333 705 399 15 14 655 61 757 4.15e-109 347
MS.gene02776.t1 AT4G21750 33.333 705 399 15 14 655 61 757 4.15e-109 347
MS.gene02776.t1 AT4G21750 33.333 705 399 15 14 655 61 757 4.15e-109 347
MS.gene02776.t1 AT3G61150 33.241 725 395 22 3 655 96 803 2.45e-108 346
MS.gene02776.t1 AT3G03260 40.226 532 281 15 4 506 9 532 9.43e-108 337
MS.gene02776.t1 AT4G00730 33.237 689 413 17 3 655 121 798 3.45e-107 343
MS.gene02776.t1 AT1G05230 34.752 564 336 10 4 546 53 605 1.07e-95 307
MS.gene02776.t1 AT2G32370 30.205 682 418 17 4 647 52 713 2.31e-94 307
MS.gene02776.t1 AT1G79840 32.589 672 398 23 12 655 40 684 3.32e-93 303
MS.gene02776.t1 AT1G79840 32.589 672 398 23 12 655 40 684 3.32e-93 303
MS.gene02776.t1 AT1G79840 32.589 672 398 23 12 655 98 742 1.10e-92 303
MS.gene02776.t1 AT1G79840 32.589 672 398 23 12 655 127 771 7.97e-92 301
MS.gene02776.t1 AT5G52170 31.667 660 382 17 21 655 63 678 1.21e-91 298
MS.gene02776.t1 AT5G52170 31.667 660 382 17 21 655 63 678 1.21e-91 298
MS.gene02776.t1 AT5G52170 31.515 660 388 15 21 655 63 683 1.99e-91 298
MS.gene02776.t1 AT5G46880 32.871 721 407 27 2 657 100 808 7.67e-91 300
MS.gene02776.t1 AT5G46880 32.871 721 407 27 2 657 100 808 7.67e-91 300
MS.gene02776.t1 AT5G46880 32.871 721 407 27 2 657 100 808 7.67e-91 300
MS.gene02776.t1 AT4G17710 31.202 657 395 20 17 657 90 705 2.08e-83 277
MS.gene02776.t1 AT1G79840 32.601 546 328 16 12 540 98 620 8.23e-78 260
MS.gene02776.t1 AT4G25530 27.778 666 457 11 2 655 29 682 1.13e-73 251
MS.gene02776.t1 AT4G00730 35.142 424 245 9 3 401 121 539 3.09e-73 246
MS.gene02776.t1 AT1G79840 33.741 409 236 14 12 405 98 486 2.31e-59 208
MS.gene02776.t1 AT5G07260 25.273 550 310 24 75 599 11 484 8.41e-27 115
MS.gene02776.t1 AT5G07260 25.045 555 310 24 75 599 11 489 3.44e-26 113

Find 114 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACATTTGGTCGACATGTTTC+TGG 0.149362 2.3:-59341566 MS.gene02776:CDS
AAAGCTCCACTTTGACTTTC+TGG 0.209562 2.3:+59341277 None:intergenic
AATAATCTTCACACCATCTT+TGG 0.210210 2.3:+59339398 None:intergenic
TTCAACTCTTGTGTGTTTAC+AGG 0.236305 2.3:+59339330 None:intergenic
GAAGTTCCATGAGCCATCTT+TGG 0.238463 2.3:+59340780 None:intergenic
AGAGTTGACCACTACTTTAA+TGG 0.241174 2.3:-59341646 MS.gene02776:CDS
TGAAGTTGTTTCAAACTATT+AGG 0.271208 2.3:+59342101 None:intergenic
TCAAAGTGGAGCTTTGTTAT+TGG 0.273622 2.3:-59341269 MS.gene02776:intron
GATTCACAAATGGTGAAAAT+TGG 0.281622 2.3:-59341595 MS.gene02776:CDS
GTCAACAATGCTATTGCATT+TGG 0.284967 2.3:-59340806 MS.gene02776:CDS
GCGCGGAGAGCATCGTTATC+TGG 0.316509 2.3:+59342203 None:intergenic
GTGGCTCAAGCTCAAGCTCC+TGG 0.323796 2.3:+59342398 None:intergenic
CCACTATGTATCAATTATTC+AGG 0.339498 2.3:-59340139 MS.gene02776:intron
TGATGATTCAACATGTGTTT+TGG 0.340849 2.3:+59341621 None:intergenic
GTCTCTTTCAAGCACTTTGA+TGG 0.342907 2.3:+59341303 None:intergenic
AAGTTCCATGAGCCATCTTT+GGG 0.351674 2.3:+59340781 None:intergenic
AGAATGTTTCATAGACCCTT+TGG 0.370185 2.3:-59339373 MS.gene02776:CDS
TGAACCTCAAAACGTCTTGC+CGG 0.371480 2.3:+59340320 None:intergenic
TAATAGTTTGAAACAACTTC+AGG 0.374417 2.3:-59342099 MS.gene02776:CDS
GGTCGACATGTTTCTGGATT+CGG 0.374726 2.3:-59341560 MS.gene02776:intron
TCAGCTTTGCTAACAATAGT+TGG 0.380163 2.3:+59341328 None:intergenic
AACATGCTCTACTTAATTAG+TGG 0.387024 2.3:-59339086 None:intergenic
AAGCTCCACTTTGACTTTCT+GGG 0.391206 2.3:+59341278 None:intergenic
CTCATGGAACTTCAAAGAAT+TGG 0.391578 2.3:-59340770 MS.gene02776:CDS
TTTCCGCGATGAGTCCTTAT+GGG 0.399067 2.3:-59341728 MS.gene02776:CDS
AATTCCCGTGGTTTCACTAA+AGG 0.399551 2.3:+59341140 None:intergenic
AGTCCAGCCACCAACATCAT+TGG 0.401935 2.3:+59341778 None:intergenic
ATTACACATCTCCTTCCTTC+AGG 0.404458 2.3:+59340566 None:intergenic
ATGCTGATGACAGCGGGGTT+AGG 0.405153 2.3:-59340460 MS.gene02776:CDS
ATAATCTTCACACCATCTTT+GGG 0.405420 2.3:+59339399 None:intergenic
GAAAATTGGAGCAAGACATT+TGG 0.407628 2.3:-59341581 MS.gene02776:CDS
GAAAGAGAACATGGAAATGA+AGG 0.408587 2.3:-59342162 MS.gene02776:CDS
AAACACACAAGAGTTGAATA+TGG 0.410220 2.3:-59339325 MS.gene02776:CDS
TATTAGGATCATTACATGAT+TGG 0.413021 2.3:+59342117 None:intergenic
GAATGTTTCATAGACCCTTT+GGG 0.421156 2.3:-59339372 MS.gene02776:CDS
AAACAAAAGAGCACAGGTTA+AGG 0.425246 2.3:-59342353 MS.gene02776:intron
ACTTGCACATCAGGTTGTTA+AGG 0.426416 2.3:-59340540 MS.gene02776:CDS
TGTAATGAAACTTGCACATC+AGG 0.446823 2.3:-59340549 MS.gene02776:CDS
GTCCAGCCACCAACATCATT+GGG 0.447296 2.3:+59341779 None:intergenic
CTCTTATGATTACTTGAAAG+AGG 0.447977 2.3:-59341060 MS.gene02776:CDS
CACTGTCAGCAACGAACCTC+TGG 0.459310 2.3:+59339206 None:intergenic
TTAAAGTAGTGGTCAACTCT+AGG 0.461640 2.3:+59341649 None:intergenic
TTAGTTTCACCTCCCAAAGA+TGG 0.462946 2.3:-59339411 MS.gene02776:CDS
AAAATGAACGTCTCAAAGAA+AGG 0.465144 2.3:-59342073 MS.gene02776:CDS
TTGCTGATGCTGATGACAGC+GGG 0.466069 2.3:-59340466 MS.gene02776:CDS
TTTCGACTTCTTAAGAGATC+CGG 0.468769 2.3:-59340339 MS.gene02776:CDS
AACCACCACTTCACTTGTTG+TGG 0.474712 2.3:+59342379 None:intergenic
GAAATTGCACACATCTCTAC+TGG 0.475230 2.3:-59340174 MS.gene02776:CDS
TATCTTGTTCATCACCTGAT+AGG 0.476594 2.3:+59344234 None:intergenic
AAAATTTGCAACAAGAGGAC+TGG 0.477606 2.3:+59339164 None:intergenic
GTGTCACTTATAATTCCATC+AGG 0.478904 2.3:-59339276 MS.gene02776:CDS
CTAGCAACAATAACAATGAA+TGG 0.487236 2.3:+59340395 None:intergenic
GAAATTCACTTCCAAGGTCC+AGG 0.488853 2.3:-59341921 MS.gene02776:CDS
TTGCATTTGGAGCCCAAAGA+TGG 0.489863 2.3:-59340793 MS.gene02776:CDS
TGAGCCTCTATCTAGATTCA+AGG 0.490503 2.3:+59341831 None:intergenic
TATGATTACTTGAAAGAGGA+TGG 0.498521 2.3:-59341056 MS.gene02776:CDS
GTGACACATTTGATAAATCA+TGG 0.499449 2.3:+59339292 None:intergenic
AATAATTGATACATAGTGGT+TGG 0.500783 2.3:+59340143 None:intergenic
ACCTCCTTGAATCTAGATAG+AGG 0.506046 2.3:-59341835 MS.gene02776:CDS
GATTCAAAATTTGCAACAAG+AGG 0.507082 2.3:+59339159 None:intergenic
TTGGATTGAGCATGTGGAAG+TGG 0.507994 2.3:-59340867 MS.gene02776:CDS
AAATTTGCAACAAGAGGACT+GGG 0.522459 2.3:+59339165 None:intergenic
CCTGAATAATTGATACATAG+TGG 0.522975 2.3:+59340139 None:intergenic
ATCATCAAAAGATTCACAAA+TGG 0.526011 2.3:-59341605 MS.gene02776:CDS
TGGCTCAAGCTCAAGCTCCT+GGG 0.527865 2.3:+59342399 None:intergenic
AACCCAATGATGTTGGTGGC+TGG 0.530454 2.3:-59341781 MS.gene02776:CDS
TAAAGTAGTGGTCAACTCTA+GGG 0.531595 2.3:+59341650 None:intergenic
AAGCTGAGACTTAACCCATA+AGG 0.535338 2.3:+59341714 None:intergenic
TGGAGCCCAAAGATGGCTCA+TGG 0.538769 2.3:-59340786 MS.gene02776:CDS
AAATGAACGTCTCAAAGAAA+GGG 0.541119 2.3:-59342072 MS.gene02776:intron
AGCTCCACTTTGACTTTCTG+GGG 0.544796 2.3:+59341279 None:intergenic
CTCTCCGCGCTGAAAATGAA+AGG 0.545522 2.3:-59342190 MS.gene02776:CDS
TACAAGTTGAAGCTGGTATG+TGG 0.546205 2.3:-59341097 MS.gene02776:CDS
AGTCGAAAACAATATGAGAC+GGG 0.556073 2.3:+59340354 None:intergenic
GGTTTCTTGGATTGAGCATG+TGG 0.560486 2.3:-59340873 MS.gene02776:CDS
ATAATTGATACATAGTGGTT+GGG 0.560512 2.3:+59340144 None:intergenic
AATACAAAACCCAATGATGT+TGG 0.560670 2.3:-59341788 MS.gene02776:CDS
ATGTGTGCAATTTCATGCCA+TGG 0.566418 2.3:+59340183 None:intergenic
GAGTTGAATATGGCAATGAA+TGG 0.573412 2.3:-59339315 MS.gene02776:CDS
AATATCTAATGAGACTTCCA+AGG 0.574407 2.3:-59340985 MS.gene02776:intron
GACTCCCCAGAAAGTCAAAG+TGG 0.577198 2.3:-59341283 MS.gene02776:CDS
TTATGCTACGTACAGATGCA+TGG 0.588414 2.3:-59341182 MS.gene02776:intron
AAGTCGAAAACAATATGAGA+CGG 0.588442 2.3:+59340353 None:intergenic
GGTGGCTGGACTTGCCGCCA+CGG 0.591534 2.3:-59341767 MS.gene02776:CDS
TGATGGGAAATTCACTTCCA+AGG 0.591880 2.3:-59341927 MS.gene02776:CDS
GTTTCAAAACAAAAGAGCAC+AGG 0.592799 2.3:-59342359 MS.gene02776:CDS
CAGAGGTTCGTTGCTGACAG+TGG 0.595573 2.3:-59339205 MS.gene02776:CDS
AAACAACATAGGATCCCAAA+GGG 0.596630 2.3:+59339358 None:intergenic
AGCCACAACAAGTGAAGTGG+TGG 0.600152 2.3:-59342381 MS.gene02776:CDS
TATTGCGTACAAGTTGAAGC+TGG 0.606947 2.3:-59341104 MS.gene02776:CDS
AAAACAATATGAGACGGGAG+AGG 0.618201 2.3:+59340359 None:intergenic
TCAGTGGTTACATTACCTGA+AGG 0.618247 2.3:-59340581 MS.gene02776:intron
TTCACCTTTAGTGAAACCAC+GGG 0.619254 2.3:-59341144 MS.gene02776:CDS
AAATTCACTTCCAAGGTCCA+GGG 0.620783 2.3:-59341920 MS.gene02776:CDS
TACAGGAGAATAAACAACAT+AGG 0.623592 2.3:+59339347 None:intergenic
CGAAGAAAGTAAAATTCCCG+TGG 0.624894 2.3:+59341128 None:intergenic
TGGTTACATTACCTGAAGGA+AGG 0.625611 2.3:-59340577 MS.gene02776:CDS
ATCTTCACACCATCTTTGGG+AGG 0.626342 2.3:+59339402 None:intergenic
CTTCCTAAAAGCTCGACACG+TGG 0.628257 2.3:-59341862 MS.gene02776:CDS
AAGCTTAAGCAACTCTTCCG+TGG 0.628294 2.3:+59341750 None:intergenic
TTGAGCCACAACAAGTGAAG+TGG 0.628334 2.3:-59342384 MS.gene02776:CDS
TAAACAACATAGGATCCCAA+AGG 0.631648 2.3:+59339357 None:intergenic
TCAGCATCAGCAAAGTATTG+TGG 0.632074 2.3:+59340476 None:intergenic
TTTCACCTTTAGTGAAACCA+CGG 0.633802 2.3:-59341145 MS.gene02776:CDS
ACAAAACCCAATGATGTTGG+TGG 0.641799 2.3:-59341785 MS.gene02776:CDS
TCAAAAGATAGTAAATCCAG+AGG 0.643636 2.3:-59339222 MS.gene02776:CDS
TCTTTGGGAGGTGAAACTAA+AGG 0.644412 2.3:+59339414 None:intergenic
AGACGGGAGAGGTATCAAAA+CGG 0.645863 2.3:+59340370 None:intergenic
ACAAGTTGAAGCTGGTATGT+GGG 0.664498 2.3:-59341096 MS.gene02776:CDS
TTTGCTGATGCTGATGACAG+CGG 0.677579 2.3:-59340467 MS.gene02776:CDS
TGCTGATGCTGATGACAGCG+GGG 0.703574 2.3:-59340465 MS.gene02776:CDS
GCCTCTATCTAGATTCAAGG+AGG 0.723251 2.3:+59341834 None:intergenic
CTTAAGCAACTCTTCCGTGG+CGG 0.730831 2.3:+59341753 None:intergenic
TAACCCATAAGGACTCATCG+CGG 0.774250 2.3:+59341725 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATATAATATAATTGAACT+CGG + chr2.3:59339542-59339561 None:intergenic 10.0%
!! ATATTATATTATATTTCATC+CGG - chr2.3:59339765-59339784 MS.gene02776:intron 10.0%
!! ATTCTCTTATAAATAAAATA+TGG + chr2.3:59343221-59343240 None:intergenic 10.0%
!! TGATGAATATTTAATTAATT+AGG - chr2.3:59340722-59340741 MS.gene02776:CDS 10.0%
!! TTTAAAGAGAAAAAAATTAT+AGG - chr2.3:59340060-59340079 MS.gene02776:intron 10.0%
!!! AAATTTTAAAATTGATTTTG+TGG + chr2.3:59340043-59340062 None:intergenic 10.0%
!!! AATTTTAAAATTGATTTTGT+GGG + chr2.3:59340042-59340061 None:intergenic 10.0%
!!! ATATATGGTTTTTTTTTTAA+TGG + chr2.3:59340658-59340677 None:intergenic 10.0%
!!! TTAATACCAAATTTTAATTT+TGG + chr2.3:59343868-59343887 None:intergenic 10.0%
!!! TTTAATTTTTAAAGAATATC+AGG - chr2.3:59339375-59339394 MS.gene02776:CDS 10.0%
!!! TTTATTTATTTTCATTTGAT+AGG - chr2.3:59339214-59339233 MS.gene02776:CDS 10.0%
!!! TTTTAACCAAAATTAAAATT+TGG - chr2.3:59343859-59343878 MS.gene02776:intron 10.0%
!! AAAGTTTCATAAAATACAAT+AGG - chr2.3:59343773-59343792 MS.gene02776:intron 15.0%
!! AAGATTGACATTTAATTATA+TGG - chr2.3:59339730-59339749 MS.gene02776:intron 15.0%
!! ATATAATTAAATGTCAATCT+TGG + chr2.3:59339731-59339750 None:intergenic 15.0%
!! CATTATAGAAACTTAATATA+TGG + chr2.3:59340673-59340692 None:intergenic 15.0%
!! GAATACTAAAGAAAATTATA+AGG + chr2.3:59342683-59342702 None:intergenic 15.0%
!! TAGTTAAATAGGTTAAATAA+TGG + chr2.3:59342652-59342671 None:intergenic 15.0%
!! TTATTAGTACTTGAAATTAA+TGG - chr2.3:59341937-59341956 MS.gene02776:CDS 15.0%
!!! CAATTATATTATATTTTCTC+CGG - chr2.3:59339546-59339565 MS.gene02776:intron 15.0%
!!! GAAACATATGTTTAATTTTT+AGG - chr2.3:59342434-59342453 MS.gene02776:CDS 15.0%
!!! GTTTTTTTTTTTTTTTTTGG+TGG - chr2.3:59340247-59340266 MS.gene02776:intron 15.0%
!!! TTTTAAACTTATCATTCAAT+TGG - chr2.3:59340805-59340824 MS.gene02776:CDS 15.0%
!! AAAAAAATTCTATGCAACAA+TGG + chr2.3:59340438-59340457 None:intergenic 20.0%
!! AAACGAAGAAAAATATTTGA+AGG + chr2.3:59342093-59342112 None:intergenic 20.0%
!! AGATAATTAAATGTCAATCT+TGG + chr2.3:59339954-59339973 None:intergenic 20.0%
!! TAGTATGTTATATCAATTAG+TGG + chr2.3:59341055-59341074 None:intergenic 20.0%
!! TCAAAATGTCTCTTATAAAT+AGG - chr2.3:59339652-59339671 MS.gene02776:intron 20.0%
!! TCAACAAATATTGATGTATT+TGG + chr2.3:59339632-59339651 None:intergenic 20.0%
!! TGTCAATTCAATAAATGAAT+CGG + chr2.3:59343656-59343675 None:intergenic 20.0%
!! TTCAAAATTTAGGCTTATTA+GGG - chr2.3:59343420-59343439 MS.gene02776:intron 20.0%
!! TTTCAAAATTTAGGCTTATT+AGG - chr2.3:59343419-59343438 MS.gene02776:intron 20.0%
!!! AACATTTTTTTTCTTCAATG+TGG - chr2.3:59343886-59343905 MS.gene02776:intron 20.0%
!!! AAGTTTTTTCATGTTTCAAA+AGG - chr2.3:59340485-59340504 MS.gene02776:CDS 20.0%
!!! ACAAAAGTACAAGAATAAAA+GGG + chr2.3:59343458-59343477 None:intergenic 20.0%
!!! AGGAGTTTTATTAGTTAAAT+AGG + chr2.3:59342663-59342682 None:intergenic 20.0%
!!! TACAAAAGTACAAGAATAAA+AGG + chr2.3:59343459-59343478 None:intergenic 20.0%
!!! TGAATTTTGATAACATGTTA+GGG - chr2.3:59342122-59342141 MS.gene02776:CDS 20.0%
!!! TGTTTAATTTTTAGGTTTCT+TGG - chr2.3:59342442-59342461 MS.gene02776:CDS 20.0%
!!! TTCAATACAATCTCATTTTA+TGG - chr2.3:59340536-59340555 MS.gene02776:CDS 20.0%
!!! TTCATTTATATACTTTTCAG+TGG - chr2.3:59342731-59342750 MS.gene02776:intron 20.0%
!!! TTGAATTTTGATAACATGTT+AGG - chr2.3:59342121-59342140 MS.gene02776:CDS 20.0%
!!! TTTCATTTGATAGGTTTTTT+AGG - chr2.3:59339223-59339242 MS.gene02776:CDS 20.0%
!!! TTTTTTTTTTTTTGGTGGTT+GGG - chr2.3:59340252-59340271 MS.gene02776:intron 20.0%
!!! TTTTTTTTTTTTTTGGTGGT+TGG - chr2.3:59340251-59340270 MS.gene02776:intron 20.0%
! AACATACAATTACACAAGTT+AGG - chr2.3:59343722-59343741 MS.gene02776:intron 25.0%
! AAGTCTCTTATAAATAAGAC+CGG + chr2.3:59339568-59339587 None:intergenic 25.0%
! AATAATTGATACATAGTGGT+TGG + chr2.3:59343188-59343207 None:intergenic 25.0%
! ACATACAATTACACAAGTTA+GGG - chr2.3:59343723-59343742 MS.gene02776:intron 25.0%
! ATAATTGATACATAGTGGTT+GGG + chr2.3:59343187-59343206 None:intergenic 25.0%
! ATCATCAAAAGATTCACAAA+TGG - chr2.3:59341723-59341742 MS.gene02776:CDS 25.0%
! TAAATGTCAATCTTGGTATA+TGG + chr2.3:59339724-59339743 None:intergenic 25.0%
! TATTAGGATCATTACATGAT+TGG + chr2.3:59341214-59341233 None:intergenic 25.0%
! TATTATATACGTACTAACCT+TGG + chr2.3:59342363-59342382 None:intergenic 25.0%
! TCTCTCAATAAAAATCATTG+TGG + chr2.3:59341820-59341839 None:intergenic 25.0%
! TTAGTACTTGAAATTAATGG+TGG - chr2.3:59341940-59341959 MS.gene02776:intron 25.0%
!! AATTTTCTGTCTAGGAAAAA+TGG - chr2.3:59341965-59341984 MS.gene02776:intron 25.0%
!! ATTTTCTGTCTAGGAAAAAT+GGG - chr2.3:59341966-59341985 MS.gene02776:intron 25.0%
!! CAAAAGTACAAGAATAAAAG+GGG + chr2.3:59343457-59343476 None:intergenic 25.0%
!! GTTAATTATTTTCATGCAGT+GGG - chr2.3:59343102-59343121 MS.gene02776:intron 25.0%
!! TAAAATTTTCTTCCGTTACA+AGG + chr2.3:59343631-59343650 None:intergenic 25.0%
!! TAATAGTTTGAAACAACTTC+AGG - chr2.3:59341229-59341248 MS.gene02776:intron 25.0%
!! TACAAGCATTTTTATGACAA+TGG - chr2.3:59342609-59342628 MS.gene02776:intron 25.0%
!! TATGTTCATTTGAAATGACA+TGG + chr2.3:59343320-59343339 None:intergenic 25.0%
!! TGAAGTTGTTTCAAACTATT+AGG + chr2.3:59341230-59341249 None:intergenic 25.0%
!! TGTTAATTATTTTCATGCAG+TGG - chr2.3:59343101-59343120 MS.gene02776:intron 25.0%
!!! AAGCCTAAATTTTGAAAAGT+TGG + chr2.3:59343416-59343435 None:intergenic 25.0%
!!! ACAAGTTTTTTTCTTTCGAA+AGG + chr2.3:59340374-59340393 None:intergenic 25.0%
!!! TCTTTTTAGTATGAGATGAT+GGG - chr2.3:59341385-59341404 MS.gene02776:intron 25.0%
!!! TGATATTTTTGGTTATCATC+TGG + chr2.3:59340904-59340923 None:intergenic 25.0%
!!! TTCTTTTTAGTATGAGATGA+TGG - chr2.3:59341384-59341403 MS.gene02776:intron 25.0%
!!! TTGATGTGTAAATTGTTTTG+TGG - chr2.3:59343831-59343850 MS.gene02776:intron 25.0%
AAAATGAACGTCTCAAAGAA+AGG - chr2.3:59341255-59341274 MS.gene02776:intron 30.0%
AAACACACAAGAGTTGAATA+TGG - chr2.3:59344003-59344022 MS.gene02776:intron 30.0%
AAATGAACGTCTCAAAGAAA+GGG - chr2.3:59341256-59341275 MS.gene02776:intron 30.0%
AACATGCTCTACTTAATTAG+AGG - chr2.3:59344242-59344261 MS.gene02776:CDS 30.0%
AAGTCGAAAACAATATGAGA+CGG + chr2.3:59342978-59342997 None:intergenic 30.0%
AATAATCTTCACACCATCTT+TGG + chr2.3:59343933-59343952 None:intergenic 30.0%
AATACAAAACCCAATGATGT+TGG - chr2.3:59341540-59341559 MS.gene02776:intron 30.0%
AATATCTAATGAGACTTCCA+AGG - chr2.3:59342343-59342362 MS.gene02776:intron 30.0%
AATTCTATGCAACAATGGAA+TGG + chr2.3:59340433-59340452 None:intergenic 30.0%
ATAATCTTCACACCATCTTT+GGG + chr2.3:59343932-59343951 None:intergenic 30.0%
ATCGGATGATTAAAATCTCA+AGG - chr2.3:59339344-59339363 MS.gene02776:CDS 30.0%
ATGAGATTGTATTGAAGTCA+TGG + chr2.3:59340532-59340551 None:intergenic 30.0%
ATGTCTCTTATAAATAGGAC+CGG - chr2.3:59339657-59339676 MS.gene02776:intron 30.0%
CAATTCTTCAAATCCAACTT+AGG + chr2.3:59340594-59340613 None:intergenic 30.0%
CCACTATGTATCAATTATTC+AGG - chr2.3:59343189-59343208 MS.gene02776:intron 30.0%
CCTGAATAATTGATACATAG+TGG + chr2.3:59343192-59343211 None:intergenic 30.0%
CTAGCAACAATAACAATGAA+TGG + chr2.3:59342936-59342955 None:intergenic 30.0%
CTCTTATGATTACTTGAAAG+AGG - chr2.3:59342268-59342287 MS.gene02776:intron 30.0%
GATTCAAAATTTGCAACAAG+AGG + chr2.3:59344172-59344191 None:intergenic 30.0%
GATTCACAAATGGTGAAAAT+TGG - chr2.3:59341733-59341752 MS.gene02776:CDS 30.0%
GTGACACATTTGATAAATCA+TGG + chr2.3:59344039-59344058 None:intergenic 30.0%
GTTTCTATAATGATGCTTCA+TGG - chr2.3:59340681-59340700 MS.gene02776:intron 30.0%
TACAGGAGAATAAACAACAT+AGG + chr2.3:59343984-59344003 None:intergenic 30.0%
TAGGATTCAATTTCGCTTAT+TGG - chr2.3:59339242-59339261 MS.gene02776:CDS 30.0%
TATGATTACTTGAAAGAGGA+TGG - chr2.3:59342272-59342291 MS.gene02776:intron 30.0%
TCAAAAGATAGTAAATCCAG+AGG - chr2.3:59344106-59344125 MS.gene02776:intron 30.0%
TCAAAGTGAAACAATTCCTA+GGG + chr2.3:59343550-59343569 None:intergenic 30.0%
TCCATACTATTTGATCTTAG+TGG + chr2.3:59339473-59339492 None:intergenic 30.0%
TTCAAAGTGAAACAATTCCT+AGG + chr2.3:59343551-59343570 None:intergenic 30.0%
TTGATGCCTTTCTTATATCT+CGG - chr2.3:59343506-59343525 MS.gene02776:intron 30.0%
! AAGCATTTTTATGACAATGG+AGG - chr2.3:59342612-59342631 MS.gene02776:intron 30.0%
! GTGCCAACTTTTCAAAATTT+AGG - chr2.3:59343410-59343429 MS.gene02776:intron 30.0%
! TACACAATAGACTTAGGTTT+TGG - chr2.3:59343588-59343607 MS.gene02776:intron 30.0%
! TATGTTGTGACATTTTCAGA+TGG + chr2.3:59343708-59343727 None:intergenic 30.0%
! TGATGATTCAACATGTGTTT+TGG + chr2.3:59341710-59341729 None:intergenic 30.0%
! TTCATTTGAAATGACATGGA+AGG + chr2.3:59343316-59343335 None:intergenic 30.0%
! TTTTGAATCAAACATCCAGA+AGG + chr2.3:59342323-59342342 None:intergenic 30.0%
!! AACTTGTTGATTTACAACTC+AGG - chr2.3:59343482-59343501 MS.gene02776:intron 30.0%
!! AAGGATTTTGAAAGAGAACA+TGG - chr2.3:59341157-59341176 MS.gene02776:CDS 30.0%
!! AATCCAACTTAGGTTGATTT+AGG + chr2.3:59340584-59340603 None:intergenic 30.0%
!! ACTTGTTGATTTACAACTCA+GGG - chr2.3:59343483-59343502 MS.gene02776:intron 30.0%
AAAATTTGCAACAAGAGGAC+TGG + chr2.3:59344167-59344186 None:intergenic 35.0%
AAACAACATAGGATCCCAAA+GGG + chr2.3:59343973-59343992 None:intergenic 35.0%
AAATTTGCAACAAGAGGACT+GGG + chr2.3:59344166-59344185 None:intergenic 35.0%
AACCTCCAAAAAGAAGAATG+AGG + chr2.3:59342299-59342318 None:intergenic 35.0%
ACGTTCTACACAATAGACTT+AGG - chr2.3:59343582-59343601 MS.gene02776:intron 35.0%
AGAATGTTTCATAGACCCTT+TGG - chr2.3:59343955-59343974 MS.gene02776:intron 35.0%
AGAGTTGACCACTACTTTAA+TGG - chr2.3:59341682-59341701 MS.gene02776:CDS 35.0%
AGGACAATGCAATATATGCA+AGG + chr2.3:59340291-59340310 None:intergenic 35.0%
AGTCGAAAACAATATGAGAC+GGG + chr2.3:59342977-59342996 None:intergenic 35.0%
ATATGTTCTCCACACAAATG+AGG + chr2.3:59343350-59343369 None:intergenic 35.0%
CCAAAAATATCAAATAGCCC+AGG - chr2.3:59340912-59340931 MS.gene02776:intron 35.0%
CGATCTCAATCAAACAATCA+CGG + chr2.3:59339328-59339347 None:intergenic 35.0%
CGTGATTGTTTGATTGAGAT+CGG - chr2.3:59339326-59339345 MS.gene02776:CDS 35.0%
CTCATGGAACTTCAAAGAAT+TGG - chr2.3:59342558-59342577 MS.gene02776:intron 35.0%
CTTTGATCTCATTACACAAC+AGG - chr2.3:59339698-59339717 MS.gene02776:intron 35.0%
GAAAATTGGAGCAAGACATT+TGG - chr2.3:59341747-59341766 MS.gene02776:CDS 35.0%
GAAAGAGAACATGGAAATGA+AGG - chr2.3:59341166-59341185 MS.gene02776:CDS 35.0%
GAATGTTTCATAGACCCTTT+GGG - chr2.3:59343956-59343975 MS.gene02776:intron 35.0%
GAGTTGAATATGGCAATGAA+TGG - chr2.3:59344013-59344032 MS.gene02776:intron 35.0%
GCCACTAAGATCAAATAGTA+TGG - chr2.3:59339469-59339488 MS.gene02776:intron 35.0%
GTAAAACTCACAGATTACAC+AGG - chr2.3:59340558-59340577 MS.gene02776:CDS 35.0%
GTCAACAATGCTATTGCATT+TGG - chr2.3:59342522-59342541 MS.gene02776:intron 35.0%
GTGTTGCAAACATGATCAAT+TGG + chr2.3:59340344-59340363 None:intergenic 35.0%
TAAACAACATAGGATCCCAA+AGG + chr2.3:59343974-59343993 None:intergenic 35.0%
TAAAGTAGTGGTCAACTCTA+GGG + chr2.3:59341681-59341700 None:intergenic 35.0%
TACACAAGTTAGGGATTTCT+TGG - chr2.3:59343732-59343751 MS.gene02776:intron 35.0%
TATCTTGTTCATCACCTGAT+AGG + chr2.3:59339097-59339116 None:intergenic 35.0%
TCAATTTCGCTTATTGGTGA+AGG - chr2.3:59339248-59339267 MS.gene02776:CDS 35.0%
TCAGCTTTGCTAACAATAGT+TGG + chr2.3:59342003-59342022 None:intergenic 35.0%
TGATGCCTTTCTTATATCTC+GGG - chr2.3:59343507-59343526 MS.gene02776:intron 35.0%
TGTAATGAAACTTGCACATC+AGG - chr2.3:59342779-59342798 MS.gene02776:intron 35.0%
TTAAAGTAGTGGTCAACTCT+AGG + chr2.3:59341682-59341701 None:intergenic 35.0%
TTCAACTCTTGTGTGTTTAC+AGG + chr2.3:59344001-59344020 None:intergenic 35.0%
TTGTGTAGAACGTTTAACAC+AGG + chr2.3:59343575-59343594 None:intergenic 35.0%
TTTCACCTTTAGTGAAACCA+CGG - chr2.3:59342183-59342202 MS.gene02776:CDS 35.0%
TTTCGACTTCTTAAGAGATC+CGG - chr2.3:59342989-59343008 MS.gene02776:intron 35.0%
! AAACAAAAGAGCACAGGTTA+AGG - chr2.3:59340975-59340994 MS.gene02776:intron 35.0%
! AAATCCTTTCATTTTCAGCG+CGG + chr2.3:59341145-59341164 None:intergenic 35.0%
! ATGGACCTCATTCTTCTTTT+TGG - chr2.3:59342291-59342310 MS.gene02776:intron 35.0%
! CCTGGGCTATTTGATATTTT+TGG + chr2.3:59340915-59340934 None:intergenic 35.0%
! GTTTCAAAACAAAAGAGCAC+AGG - chr2.3:59340969-59340988 MS.gene02776:intron 35.0%
!! GTGTCACTTATAATTCCATC+AGG - chr2.3:59344052-59344071 MS.gene02776:intron 35.0%
!! TCAAAGTGGAGCTTTGTTAT+TGG - chr2.3:59342059-59342078 MS.gene02776:intron 35.0%
!! TGGTGGATAATTTTCTGTCT+AGG - chr2.3:59341957-59341976 MS.gene02776:intron 35.0%
AAAACAATATGAGACGGGAG+AGG + chr2.3:59342972-59342991 None:intergenic 40.0%
AAATTCACTTCCAAGGTCCA+GGG - chr2.3:59341408-59341427 MS.gene02776:intron 40.0%
AAGCTGAGACTTAACCCATA+AGG + chr2.3:59341617-59341636 None:intergenic 40.0%
AAGTTCCATGAGCCATCTTT+GGG + chr2.3:59342550-59342569 None:intergenic 40.0%
AATTCCCGTGGTTTCACTAA+AGG + chr2.3:59342191-59342210 None:intergenic 40.0%
ACAAAACCCAATGATGTTGG+TGG - chr2.3:59341543-59341562 MS.gene02776:intron 40.0%
ACATTTGGTCGACATGTTTC+TGG - chr2.3:59341762-59341781 MS.gene02776:CDS 40.0%
ACCTCCTTGAATCTAGATAG+AGG - chr2.3:59341493-59341512 MS.gene02776:intron 40.0%
AGCCATGAAGCACAAATCTT+AGG + chr2.3:59340765-59340784 None:intergenic 40.0%
AGGCCTAAATCAACCTAAGT+TGG - chr2.3:59340578-59340597 MS.gene02776:CDS 40.0%
ATGTGTGCAATTTCATGCCA+TGG + chr2.3:59343148-59343167 None:intergenic 40.0%
ATTACACATCTCCTTCCTTC+AGG + chr2.3:59342765-59342784 None:intergenic 40.0%
CGAAGAAAGTAAAATTCCCG+TGG + chr2.3:59342203-59342222 None:intergenic 40.0%
CTCTTATAAATAGGACCGGA+GGG - chr2.3:59339661-59339680 MS.gene02776:intron 40.0%
CTTCATGAGCTTAACTCTGT+TGG + chr2.3:59340316-59340335 None:intergenic 40.0%
GAAAGCCCGAGATATAAGAA+AGG + chr2.3:59343515-59343534 None:intergenic 40.0%
GAAATTGCACACATCTCTAC+TGG - chr2.3:59343154-59343173 MS.gene02776:intron 40.0%
GTCCTAAGATTTGTGCTTCA+TGG - chr2.3:59340760-59340779 MS.gene02776:CDS 40.0%
GTCTCTTTCAAGCACTTTGA+TGG + chr2.3:59342028-59342047 None:intergenic 40.0%
TATCGAATACAGGTATCCTG+CGG - chr2.3:59339272-59339291 MS.gene02776:CDS 40.0%
TATGATGCACCTCATTTGTG+TGG - chr2.3:59343338-59343357 MS.gene02776:intron 40.0%
TCAGAGATGAAAAAGCCTGA+TGG + chr2.3:59344070-59344089 None:intergenic 40.0%
TCAGTGGTTACATTACCTGA+AGG - chr2.3:59342747-59342766 MS.gene02776:intron 40.0%
TCTCTTATAAATAGGACCGG+AGG - chr2.3:59339660-59339679 MS.gene02776:intron 40.0%
TGAACACATTCATCCAGTCA+AGG + chr2.3:59339449-59339468 None:intergenic 40.0%
TGAGCCTCTATCTAGATTCA+AGG + chr2.3:59341500-59341519 None:intergenic 40.0%
TGATGGGAAATTCACTTCCA+AGG - chr2.3:59341401-59341420 MS.gene02776:intron 40.0%
TGGTGAAGGATATCGAATAC+AGG - chr2.3:59339262-59339281 MS.gene02776:CDS 40.0%
TGGTTACATTACCTGAAGGA+AGG - chr2.3:59342751-59342770 MS.gene02776:intron 40.0%
TGTTCTCGATCAAACTGTCA+CGG - chr2.3:59339421-59339440 MS.gene02776:intron 40.0%
TTAGTTTCACCTCCCAAAGA+TGG - chr2.3:59343917-59343936 MS.gene02776:intron 40.0%
TTATGCTACGTACAGATGCA+TGG - chr2.3:59342146-59342165 MS.gene02776:CDS 40.0%
TTCACCTTTAGTGAAACCAC+GGG - chr2.3:59342184-59342203 MS.gene02776:CDS 40.0%
TTTCGATTAGTGCAAACCCT+AGG - chr2.3:59343531-59343550 MS.gene02776:intron 40.0%
! AAAGCTCCACTTTGACTTTC+TGG + chr2.3:59342054-59342073 None:intergenic 40.0%
! AAGCTCCACTTTGACTTTCT+GGG + chr2.3:59342053-59342072 None:intergenic 40.0%
! AATGACATGGAAGGAAGTGT+AGG + chr2.3:59343307-59343326 None:intergenic 40.0%
! ACAAGTTGAAGCTGGTATGT+GGG - chr2.3:59342232-59342251 MS.gene02776:intron 40.0%
! ACTTGCACATCAGGTTGTTA+AGG - chr2.3:59342788-59342807 MS.gene02776:intron 40.0%
! GACCTCATTCTTCTTTTTGG+AGG - chr2.3:59342294-59342313 MS.gene02776:intron 40.0%
! GATTTTAGATCTACTCCCTC+CGG + chr2.3:59339679-59339698 None:intergenic 40.0%
! TACAAGTTGAAGCTGGTATG+TGG - chr2.3:59342231-59342250 MS.gene02776:intron 40.0%
! TAGGTATGTCAGCCTTGTAA+CGG - chr2.3:59343616-59343635 MS.gene02776:intron 40.0%
! TATTGCGTACAAGTTGAAGC+TGG - chr2.3:59342224-59342243 MS.gene02776:intron 40.0%
! TCTTTGGGAGGTGAAACTAA+AGG + chr2.3:59343917-59343936 None:intergenic 40.0%
! TGATACTTCCTCTTTTTCCC+TGG + chr2.3:59341428-59341447 None:intergenic 40.0%
! TGGAAGGAAGTGTAGGAAAA+TGG + chr2.3:59343300-59343319 None:intergenic 40.0%
! TTTTGGCGCCATTAAAGTAG+TGG + chr2.3:59341693-59341712 None:intergenic 40.0%
!! CGTTTTGTGATGGAAATCCA+TGG - chr2.3:59343128-59343147 MS.gene02776:intron 40.0%
!! GACTTAGGTTTTGGCGTAAT+AGG - chr2.3:59343597-59343616 MS.gene02776:intron 40.0%
!! TCAGCATCAGCAAAGTATTG+TGG + chr2.3:59342855-59342874 None:intergenic 40.0%
!! TCTTTTTGGAGGTTTCCTTC+TGG - chr2.3:59342305-59342324 MS.gene02776:intron 40.0%
AAGCTTAAGCAACTCTTCCG+TGG + chr2.3:59341581-59341600 None:intergenic 45.0%
ATCTTCACACCATCTTTGGG+AGG + chr2.3:59343929-59343948 None:intergenic 45.0%
GAAATTCACTTCCAAGGTCC+AGG - chr2.3:59341407-59341426 MS.gene02776:intron 45.0%
GAAGTTCCATGAGCCATCTT+TGG + chr2.3:59342551-59342570 None:intergenic 45.0%
GCCTCTATCTAGATTCAAGG+AGG + chr2.3:59341497-59341516 None:intergenic 45.0%
GGTTTCTTGGATTGAGCATG+TGG - chr2.3:59342455-59342474 MS.gene02776:intron 45.0%
GTATGCACACATTCACTCAG+AGG - chr2.3:59339300-59339319 MS.gene02776:CDS 45.0%
TAACCCATAAGGACTCATCG+CGG + chr2.3:59341606-59341625 None:intergenic 45.0%
TGAACCTCAAAACGTCTTGC+CGG + chr2.3:59343011-59343030 None:intergenic 45.0%
TGAGCTTAACTCTGTTGGCA+AGG + chr2.3:59340311-59340330 None:intergenic 45.0%
TGCAATATATGCAAGGTCCG+AGG + chr2.3:59340284-59340303 None:intergenic 45.0%
TTGAGCCACAACAAGTGAAG+TGG - chr2.3:59340944-59340963 MS.gene02776:intron 45.0%
TTGGATTGAGCATGTGGAAG+TGG - chr2.3:59342461-59342480 MS.gene02776:intron 45.0%
TTTCCGCGATGAGTCCTTAT+GGG - chr2.3:59341600-59341619 MS.gene02776:CDS 45.0%
TTTGCTGATGCTGATGACAG+CGG - chr2.3:59342861-59342880 MS.gene02776:intron 45.0%
! AACCACCACTTCACTTGTTG+TGG + chr2.3:59340952-59340971 None:intergenic 45.0%
! AGCTCCACTTTGACTTTCTG+GGG + chr2.3:59342052-59342071 None:intergenic 45.0%
! CAGTGGGATACGTTTTGTGA+TGG - chr2.3:59343118-59343137 MS.gene02776:intron 45.0%
! TTGCATTTGGAGCCCAAAGA+TGG - chr2.3:59342535-59342554 MS.gene02776:intron 45.0%
! TTTTCCGCGATGAGTCCTTA+TGG - chr2.3:59341599-59341618 MS.gene02776:CDS 45.0%
!! AGACGGGAGAGGTATCAAAA+CGG + chr2.3:59342961-59342980 None:intergenic 45.0%
!! GGTCGACATGTTTCTGGATT+CGG - chr2.3:59341768-59341787 MS.gene02776:CDS 45.0%
!! TTTATATAATACTAAAAAAA+TGG - chr2.3:59340010-59340029 MS.gene02776:intron 5.0%
!!! ATTGTTTTTTTTTTTTTTTT+TGG - chr2.3:59340244-59340263 MS.gene02776:intron 5.0%
AACTGTCACGGATCCTTGAC+TGG - chr2.3:59339433-59339452 MS.gene02776:intron 50.0%
AGCCACAACAAGTGAAGTGG+TGG - chr2.3:59340947-59340966 MS.gene02776:intron 50.0%
AGTCCAGCCACCAACATCAT+TGG + chr2.3:59341553-59341572 None:intergenic 50.0%
CTCTCCGCGCTGAAAATGAA+AGG - chr2.3:59341138-59341157 MS.gene02776:CDS 50.0%
CTTAAGCAACTCTTCCGTGG+CGG + chr2.3:59341578-59341597 None:intergenic 50.0%
CTTCCTAAAAGCTCGACACG+TGG - chr2.3:59341466-59341485 MS.gene02776:intron 50.0%
GACTCCCCAGAAAGTCAAAG+TGG - chr2.3:59342045-59342064 MS.gene02776:intron 50.0%
GTCCAGCCACCAACATCATT+GGG + chr2.3:59341552-59341571 None:intergenic 50.0%
TCCAAGGTCCAGGGAAAAAG+AGG - chr2.3:59341417-59341436 MS.gene02776:intron 50.0%
TTGCTGATGCTGATGACAGC+GGG - chr2.3:59342862-59342881 MS.gene02776:intron 50.0%
! AGATCCGGCAAGACGTTTTG+AGG - chr2.3:59343004-59343023 MS.gene02776:intron 50.0%
! CTTCCACGTGTCGAGCTTTT+AGG + chr2.3:59341472-59341491 None:intergenic 50.0%
! TCCTCTTTTTCCCTGGACCT+TGG + chr2.3:59341421-59341440 None:intergenic 50.0%
!! AACCCAATGATGTTGGTGGC+TGG - chr2.3:59341547-59341566 MS.gene02776:intron 50.0%
ATGCTGATGACAGCGGGGTT+AGG - chr2.3:59342868-59342887 MS.gene02776:intron 55.0%
CACTGTCAGCAACGAACCTC+TGG + chr2.3:59344125-59344144 None:intergenic 55.0%
CAGAGGTTCGTTGCTGACAG+TGG - chr2.3:59344123-59344142 MS.gene02776:intron 55.0%
TGCTGATGCTGATGACAGCG+GGG - chr2.3:59342863-59342882 MS.gene02776:intron 55.0%
TGGAGCCCAAAGATGGCTCA+TGG - chr2.3:59342542-59342561 MS.gene02776:intron 55.0%
TGGCTCAAGCTCAAGCTCCT+GGG + chr2.3:59340932-59340951 None:intergenic 55.0%
TGGTGGTTGGGTTTGAGCCT+CGG - chr2.3:59340264-59340283 MS.gene02776:intron 55.0%
TGTGTGCATACAGTGACCGC+AGG + chr2.3:59339291-59339310 None:intergenic 55.0%
GTGGCTCAAGCTCAAGCTCC+TGG + chr2.3:59340933-59340952 None:intergenic 60.0%
!! GCGCGGAGAGCATCGTTATC+TGG + chr2.3:59341128-59341147 None:intergenic 60.0%
GGTGGCTGGACTTGCCGCCA+CGG - chr2.3:59341561-59341580 MS.gene02776:CDS 70.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 59339089 59344261 59339089 ID=MS.gene02776
chr2.3 mRNA 59339089 59344261 59339089 ID=MS.gene02776.t1;Parent=MS.gene02776
chr2.3 exon 59344167 59344261 59344167 ID=MS.gene02776.t1.exon1;Parent=MS.gene02776.t1
chr2.3 CDS 59344167 59344261 59344167 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59342354 59342471 59342354 ID=MS.gene02776.t1.exon2;Parent=MS.gene02776.t1
chr2.3 CDS 59342354 59342471 59342354 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59342073 59342240 59342073 ID=MS.gene02776.t1.exon3;Parent=MS.gene02776.t1
chr2.3 CDS 59342073 59342240 59342073 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59341561 59341956 59341561 ID=MS.gene02776.t1.exon4;Parent=MS.gene02776.t1
chr2.3 CDS 59341561 59341956 59341561 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59341270 59341371 59341270 ID=MS.gene02776.t1.exon5;Parent=MS.gene02776.t1
chr2.3 CDS 59341270 59341371 59341270 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59340986 59341189 59340986 ID=MS.gene02776.t1.exon6;Parent=MS.gene02776.t1
chr2.3 CDS 59340986 59341189 59340986 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59340717 59340894 59340717 ID=MS.gene02776.t1.exon7;Parent=MS.gene02776.t1
chr2.3 CDS 59340717 59340894 59340717 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59340325 59340599 59340325 ID=MS.gene02776.t1.exon8;Parent=MS.gene02776.t1
chr2.3 CDS 59340325 59340599 59340325 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59340140 59340229 59340140 ID=MS.gene02776.t1.exon9;Parent=MS.gene02776.t1
chr2.3 CDS 59340140 59340229 59340140 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
chr2.3 exon 59339089 59339436 59339089 ID=MS.gene02776.t1.exon10;Parent=MS.gene02776.t1
chr2.3 CDS 59339089 59339436 59339089 ID=cds.MS.gene02776.t1;Parent=MS.gene02776.t1
Gene Sequence

>MS.gene02776

ATGGACCTATCAGGTGATGAACAAGATAGTGACAACTCAAATGAATCAAAAAGAGTTTGTCGACATTCTGCTGATCAAATACTTAAGCTAGAAGAGTAAGATGATCAATCTCTGCTTATGTAAATTTTATTTATTTTCATTTGATAGGTTTTTTAGGATTCAATTTCGCTTATTGGTGAAGGATATCGAATACAGGTATCCTGCGGTCACTGTATGCACACATTCACTCAGAGGATCCGTGATTGTTTGATTGAGATCGGATGATTAAAATCTCAAGGTCGATAAGTTTAATTTTTAAAGAATATCAGGATCTGTCTACTTTTTGAAAATACTGTTCTCGATCAAACTGTCACGGATCCTTGACTGGATGAATGTGTTCAGCCACTAAGATCAAATAGTATGGATCTTATGACTACATGAATGCGTTCAATCAATGACAATATATGAAATCCGAGTTCAATTATATTATATTTTCTCCGGTCTTATTTATAAGAGACTTTTGAGTCAACAAAAATTGATGTATTTAGTTCAAAATCTAGACCAAATACATCAATATTTGTTGATCAAAATGTCTCTTATAAATAGGACCGGAGGGAGTAGATCTAAAATCTTTGATCTCATTACACAACACGCCATATACCAAGATTGACATTTAATTATATGGAATCTGAGTTCAATATTATATTATATTTCATCCGGTCTTATTTATAAGAGACTTTTGAGTCAACAAAAATTGATGTGCATATATAGTTCAAAATTTAGACCAAATACATCAATATTTGTTGATCAAAATGTCTCTTATAAATAGGACCGGAGGGAGTAGATCTAAAATCTTTGATCTCATTACACAACAGGCCATATACCAAGATTGACATTTAATTATCTAGATAATTCATTTCACACTCTAATTGACTACTGCAATTTATATAATACTAAAAAAATGGTTATATCCCACAAAATCAATTTTAAAATTTAAAGAGAAAAAAATTATAGGTCAATAATATATAACAATTTTGTTATCTTTTTTTCTACTAATTTTTTTTTTATCATTTTTATTTTGTTGAAACACAGATTCTTATTTGAGACAGTTTCATCAATTGTTTTAATCAAATAATATCTGTATATATACAAGATTTTAAACTATATACATAGTCAATTGTTTTTTTTTTTTTTTTTGGTGGTTGGGTTTGAGCCTCGGACCTTGCATATATTGCATTGTCCTTGCCAACAGAGTTAAGCTCATGAAGACAATCCAATTGATCATGTTTGCAACACTTTGTTGCCTTTCGAAAGAAAAAAACTTGTTTTTTTGACGAAAGAAAGAAAATTCTTACTCACAATCCATTCCATTGTTGCATAGAATTTTTTTATTTTTTATTTATATTGAGTTAAAGAAAAGTTTTTTCATGTTTCAAAAGGCTGTTTATATTCTTATCAAATCCATGACTTCAATACAATCTCATTTTATGGTAAAACTCACAGATTACACAGGCCTAAATCAACCTAAGTTGGATTTGAAGAATTGTAGTGCTACTTGTACTTTATTCTATATCTAATAAAGATTTTCCATTAAAAAAAAAACCATATATTAAGTTTCTATAATGATGCTTCATGGCTCGTGTATGTGTCATAATGATGAATATTTAATTAATTAGGAAAGATAAATCTAGTGTCCTAAGATTTGTGCTTCATGGCTTGTGTATGTGTCATTTCTGCTTTTAAACTTATCATTCAATTGGCTTTGCAATGCAATCTAACGCTTAATTTTGTTTTTTGTTTCTTAAATGAAGAATATTCAAAACGCTTACACATCCAGATGATAACCAAAAATATCAAATAGCCCAGGAGCTTGAGCTTGAGCCACAACAAGTGAAGTGGTGGTTTCAAAACAAAAGAGCACAGGTTAAGGTAACATATTTTTTTTTAGTTTTATCAAAATCTTAGTTTCAATTTTTTTCACATGCCACTAATTGATATAACATACTAATATATATATATTTTGTATATGATGTCATTTCAAGAACAAAAATTTAAAACCAGATAACGATGCTCTCCGCGCTGAAAATGAAAGGATTTTGAAAGAGAACATGGAAATGAAGGAGAGACTGAAGAATTTATTGTGCCAATCATGTAATGATCCTAATAGTTTGAAACAACTTCAGGTTGAAAATGAACGTCTCAAAGAAAGGGTGAGTTAGTATAGCTAGATACAATGTTTCAATATCTCAATTTTTTATGTAAATAATTTACTTTGATACTATTGACTAATTTATTATATTATTCGTATGCATGAATTTCTTTTTAGTATGAGATGATGGGAAATTCACTTCCAAGGTCCAGGGAAAAAGAGGAAGTATCATTAGCACTAAAGTTAGCTCTTCCTAAAAGCTCGACACGTGGAAGCACCTCCTTGAATCTAGATAGAGGCTCAAGTTCAAAGAGTTCTTTAGAAATACAAAACCCAATGATGTTGGTGGCTGGACTTGCCGCCACGGAAGAGTTGCTTAAGCTTTTCCGCGATGAGTCCTTATGGGTTAAGTCTCAGCTTAATCGAAGACTTGTTCTTCAAAAAAACTATGAAGACATCTTCCCTAGAGTTGACCACTACTTTAATGGCGCCAAAACACATGTTGAATCATCAAAAGATTCACAAATGGTGAAAATTGGAGCAAGACATTTGGTCGACATGTTTCTGGATTCGGTAAGCATTTATAACATAAATATTTCTCCACAATGATTTTTATTGAGAGATCATATTTATCAACTATTAAGATCATTATTGATACAATAACTATTGACAATATGTCAATTAAAAGCACATTAACTATTTTTAATTTATCTTAAATATTTATTAGTACTTGAAATTAATGGTGGATAATTTTCTGTCTAGGAAAAATGGGCAAATCTTTTTCCAACTATTGTTAGCAAAGCTGAGACCATCAAAGTGCTTGAAAGAGACTCCCCAGAAAGTCAAAGTGGAGCTTTGTTATTGGTATATTTTCCTTCAAATATTTTTCTTCGTTTATGATATTTTGAATTTTGATAACATGTTAGGGTTTATGCTACGTACAGATGCATGGAGAGATGCATGTTCTTTCACCTTTAGTGAAACCACGGGAATTTTACTTTCTTCGCTATTGCGTACAAGTTGAAGCTGGTATGTGGGTGATTGCTGATGTCTCTTATGATTACTTGAAAGAGGATGGACCTCATTCTTCTTTTTGGAGGTTTCCTTCTGGATGTTTGATTCAAAAAATATCTAATGAGACTTCCAAGGTTAGTACGTATATAATATAGTTAATCAATCTTTGTAAAATAAACTTATATAATAGAGTGATTATAATAGAAACATATGTTTAATTTTTAGGTTTCTTGGATTGAGCATGTGGAAGTGGATTTGAAGATTCAAACACATAGTATGTATAGAGATATTGTCAACAATGCTATTGCATTTGGAGCCCAAAGATGGCTCATGGAACTTCAAAGAATTGGTGAAAGATGTAGTAGTGCTGCACTTGAATACAAGCATTTTTATGACAATGGAGGTAACTCTCGATTTGCCATTATTTAACCTATTTAACTAATAAAACTCCTTATAATTTTCTTTAGTATTCTCTTCTTAGTTGAAATATGTGTGATTTATTCATTTATATACTTTTCAGTGGTTACATTACCTGAAGGAAGGAGATGTGTAATGAAACTTGCACATCAGGTTGTTAAGGAGTTCAGTAAAAATTTAACAATGTCAAGCAAATCAGATTTACCACAATACTTTGCTGATGCTGATGACAGCGGGGTTAGGTTTTCGATTCGAAAAAATAGAAACTTATTTCTGTCAAATGATCCATTCATTGTTATTGTTGCTAGCTCCGTTTTGATACCTCTCCCGTCTCATATTGTTTTCGACTTCTTAAGAGATCCGGCAAGACGTTTTGAGGTTCAAAGAATTTTTGTTTATTTGAATTTTTTGTAAGTTTTAACTTTTCATTGTTTATCATTAATACATGTCATTTGTTAATTATTTTCATGCAGTGGGATACGTTTTGTGATGGAAATCCATGGCATGAAATTGCACACATCTCTACTGGAACTCATCCCAACCACTATGTATCAATTATTCAGGTATTTACCATATTTTATTTATAAGAGAATATTTTGTTTTTTTTTTTTTTTAATGTTATAAACTATATCTTAATTTATATCTATAGCCATTTTCCTACACTTCCTTCCATGTCATTTCAAATGAACATATGATGCACCTCATTTGTGTGGAGAACATATGTGTGATCAAAATGAATCTAGGATTGTTTCAATTATTTTGGTGCCAACTTTTCAAAATTTAGGCTTATTAGGGCAAATGTAGCTCCCCTTTTATTCTTGTACTTTTGTAGATAACTTGTTGATTTACAACTCAGGGTTGATGCCTTTCTTATATCTCGGGCTTTCGATTAGTGCAAACCCTAGGAATTGTTTCACTTTGAAACCTGTGTTAAACGTTCTACACAATAGACTTAGGTTTTGGCGTAATAGGTATGTCAGCCTTGTAACGGAAGAAAATTTTAGTCCGATTCATTTATTGAATTGACACAAATTTTTTAAAAGAAAAATTGTCTACACCATCTGAAAATGTCACAACATACAATTACACAAGTTAGGGATTTCTTGGTCACATATTTATATATATAAAGTTTCATAAAATACAATAGGTTTACATAAGATGACTAATAATACTTTATCATCTTTTGATGTGTAAATTGTTTTGTGGACTAATTTTAACCAAAATTAAAATTTGGTATTAACATTTTTTTTCTTCAATGTGGAGCAGCCTTTAGTTTCACCTCCCAAAGATGGTGTGAAGATTATTCAAGAATGTTTCATAGACCCTTTGGGATCCTATGTTGTTTATTCTCCTGTAAACACACAAGAGTTGAATATGGCAATGAATGGCCATGATTTATCAAATGTGTCACTTATAATTCCATCAGGCTTTTTCATCTCTGAAGATAGTAAATCTCTTTCAAAAGATAGTAAATCCAGAGGTTCGTTGCTGACAGTGGCTTTTGAAATGCACATGCCCAGTCCTCTTGTTGCAAATTTTGAATCTGTAGCTGAAGCTTCAAATGCACTCATGACAACAGTAGTTAAAAGCATAAAACATGCTCTACTTAATTAG
Protein sequence

>MS.gene02776.t1

MDLSGDEQDSDNSNESKRVCRHSADQILKLEEIFKTLTHPDDNQKYQIAQELELEPQQVKWWFQNKRAQVKNKNLKPDNDALRAENERILKENMEMKERLKNLLCQSCNDPNSLKQLQVENERLKERYEMMGNSLPRSREKEEVSLALKLALPKSSTRGSTSLNLDRGSSSKSSLEIQNPMMLVAGLAATEELLKLFRDESLWVKSQLNRRLVLQKNYEDIFPRVDHYFNGAKTHVESSKDSQMVKIGARHLVDMFLDSEKWANLFPTIVSKAETIKVLERDSPESQSGALLLMHGEMHVLSPLVKPREFYFLRYCVQVEAGMWVIADVSYDYLKEDGPHSSFWRFPSGCLIQKISNETSKVSWIEHVEVDLKIQTHSMYRDIVNNAIAFGAQRWLMELQRIGERCSSAALEYKHFYDNGVVTLPEGRRCVMKLAHQVVKEFSKNLTMSSKSDLPQYFADADDSGVRFSIRKNRNLFLSNDPFIVIVASSVLIPLPSHIVFDFLRDPARRFEWDTFCDGNPWHEIAHISTGTHPNHYVSIIQPLVSPPKDGVKIIQECFIDPLGSYVVYSPVNTQELNMAMNGHDLSNVSLIIPSGFFISEDSKSLSKDSKSRGSLLTVAFEMHMPSPLVANFESVAEASNALMTTVVKSIKHALLN