AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027893

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027893.t1 MTR_5g030130 98.734 237 3 0 1 237 1 237 1.95e-180 494
MS.gene027893.t1 MTR_8g066820 85.294 238 31 3 1 237 1 235 7.39e-142 396
MS.gene027893.t1 MTR_5g030130 98.765 162 2 0 1 162 1 162 2.45e-122 345
MS.gene027893.t1 MTR_4g078170 73.500 200 51 1 33 232 13 210 9.64e-110 315
MS.gene027893.t1 MTR_5g007230 70.283 212 54 3 21 232 7 209 1.48e-107 309
MS.gene027893.t1 MTR_1g062160 54.680 203 79 4 35 231 7 202 7.72e-72 218
MS.gene027893.t1 MTR_7g102790 58.000 200 78 3 35 231 7 203 2.53e-70 214
MS.gene027893.t1 MTR_2g060540 50.000 140 60 4 31 160 6 145 4.44e-42 140
MS.gene027893.t1 MTR_2g060500 48.571 140 62 3 31 160 6 145 9.70e-42 139
MS.gene027893.t1 MTR_2g084495 36.000 225 114 5 36 230 5 229 1.23e-40 139
MS.gene027893.t1 MTR_2g055210 33.212 274 133 6 1 230 72 339 9.31e-39 137
MS.gene027893.t1 MTR_4g116300 45.185 135 73 1 35 169 6 139 1.24e-35 127
MS.gene027893.t1 MTR_4g094680 35.616 219 120 5 32 230 19 236 2.37e-35 125
MS.gene027893.t1 MTR_2g084525 47.183 142 65 4 36 167 5 146 2.64e-35 126
MS.gene027893.t1 MTR_2g084510 33.473 239 114 5 36 230 4 241 1.10e-34 124
MS.gene027893.t1 MTR_2g036170 32.018 228 110 6 35 230 37 251 3.83e-28 107
MS.gene027893.t1 MTR_8g105930 35.616 146 71 5 37 161 15 158 1.25e-17 79.3
MS.gene027893.t1 MTR_8g097310 31.677 161 95 6 74 230 4 153 2.73e-15 71.2
MS.gene027893.t1 MTR_5g077740 25.871 201 107 8 35 230 23 186 6.61e-14 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027893.t1 AT4G17900 74.249 233 52 4 1 231 1 227 3.96e-126 357
MS.gene027893.t1 AT4G17900 73.762 202 46 3 32 231 17 213 8.82e-107 307
MS.gene027893.t1 AT1G32700 72.093 215 55 2 25 237 2 213 4.11e-105 303
MS.gene027893.t1 AT1G32700 73.446 177 42 2 63 237 1 174 1.54e-82 244
MS.gene027893.t1 AT5G46710 53.191 235 95 6 1 230 1 225 1.43e-80 241
MS.gene027893.t1 AT1G21000 48.750 240 84 4 28 230 6 243 3.82e-76 230
MS.gene027893.t1 AT1G21000 48.750 240 84 4 28 230 9 246 4.34e-76 230
MS.gene027893.t1 AT5G46710 52.404 208 91 4 28 230 5 209 6.94e-73 221
MS.gene027893.t1 AT1G76590 49.130 230 81 2 35 230 18 245 5.75e-72 220
MS.gene027893.t1 AT5G46710 60.494 162 56 3 1 161 1 155 4.21e-68 207
MS.gene027893.t1 AT1G43000 47.907 215 100 2 28 230 9 223 6.09e-68 209
MS.gene027893.t1 AT1G43000 47.907 215 100 2 28 230 2 216 7.30e-68 208
MS.gene027893.t1 AT2G27930 45.673 208 81 5 35 232 4 189 3.57e-52 167
MS.gene027893.t1 AT2G27930 45.673 208 81 5 35 232 4 189 3.57e-52 167
MS.gene027893.t1 AT2G27930 54.745 137 52 2 35 161 4 140 2.21e-47 154
MS.gene027893.t1 AT2G27930 54.745 137 52 2 35 161 4 140 2.21e-47 154
MS.gene027893.t1 AT2G12646 46.667 135 71 1 35 169 3 136 1.55e-36 129
MS.gene027893.t1 AT2G12646 46.667 135 71 1 35 169 6 139 1.74e-36 129
MS.gene027893.t1 AT2G12646 46.667 135 71 1 35 169 6 139 1.74e-36 129
MS.gene027893.t1 AT1G31040 35.398 226 114 4 35 230 19 242 2.19e-36 129
MS.gene027893.t1 AT3G60670 45.455 132 71 1 30 161 2 132 1.45e-34 124
MS.gene027893.t1 AT2G27930 47.403 154 50 4 88 232 61 192 3.76e-34 121
MS.gene027893.t1 AT2G27930 47.403 154 50 4 88 232 61 192 3.76e-34 121
MS.gene027893.t1 AT2G01818 33.953 215 115 9 37 230 13 221 2.01e-21 89.4
MS.gene027893.t1 AT2G01818 33.766 154 80 7 94 230 9 157 3.22e-11 60.5

Find 52 sgRNAs with CRISPR-Local

Find 107 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCATGATTCTCCTGTTCTT+TGG 0.256621 5.4:+20365760 None:intergenic
TGGTATTCCCTTTCTTCTCT+TGG 0.322835 5.4:+20364173 None:intergenic
TGGTTTGATTTCTCTGACAC+TGG 0.330907 5.4:+20365780 None:intergenic
TCCTTCCGGTTCTGTTCTCT+TGG 0.350274 5.4:-20364866 MS.gene027893:CDS
CAAAGACCACCGTTACATTC+AGG 0.356801 5.4:-20365440 MS.gene027893:intron
TTCTGTAATTAACTGAAGTT+GGG 0.357223 5.4:+20364199 None:intergenic
CAGAAGCACTTGGACATTGC+TGG 0.371556 5.4:-20365007 MS.gene027893:CDS
GTAGCCTTCTTGATTCCTTC+CGG 0.377067 5.4:-20364880 MS.gene027893:CDS
GTTCTGTAATTAACTGAAGT+TGG 0.401937 5.4:+20364198 None:intergenic
CTTCATACCATGATGTGATA+AGG 0.416229 5.4:-20365042 MS.gene027893:CDS
TGAATGTAATATGTATTGTT+TGG 0.429253 5.4:-20365506 MS.gene027893:CDS
CCTTGCACTGTTGATAATGT+AGG 0.430360 5.4:+20364976 None:intergenic
TATTGTTTGGATTGTATGAA+TGG 0.430470 5.4:-20365493 MS.gene027893:CDS
CTAAGAACTTCCAGAAGAAA+AGG 0.442353 5.4:-20364332 MS.gene027893:CDS
GAGAAATCAAACCAAAGAAC+AGG 0.443596 5.4:-20365771 MS.gene027893:CDS
ATACCACATAGAGCCCCATT+GGG 0.447453 5.4:-20364156 MS.gene027893:CDS
TTCATACCATGATGTGATAA+GGG 0.458976 5.4:-20365041 MS.gene027893:CDS
TGCAACCAAGAGAACAGAAC+CGG 0.486127 5.4:+20364861 None:intergenic
AGAACAGCCAAGAGAAGAAA+GGG 0.492152 5.4:-20364180 MS.gene027893:CDS
CAGAACAGCCAAGAGAAGAA+AGG 0.499241 5.4:-20364181 MS.gene027893:CDS
GAATGTAACGGTGGTCTTTG+TGG 0.500381 5.4:+20365443 None:intergenic
GTTCTGTTCTCTTGGTTGCA+AGG 0.507358 5.4:-20364858 MS.gene027893:intron
CATCTGTTATCATCATCATC+AGG 0.523367 5.4:+20365604 None:intergenic
CCTCAACCAAGGCCAGGAAA+AGG 0.529589 5.4:-20364932 MS.gene027893:CDS
AATACCACATAGAGCCCCAT+TGG 0.536612 5.4:-20364157 MS.gene027893:CDS
TTCAACAATGGTTTCAACCA+TGG 0.537430 5.4:+20365577 None:intergenic
AAGAAAGCTTCTTTCAACAA+TGG 0.545716 5.4:+20365565 None:intergenic
CATTCACCCTTATCACATCA+TGG 0.546598 5.4:+20365035 None:intergenic
ACCAAAGAACAGGAGAATCA+TGG 0.546667 5.4:-20365761 MS.gene027893:intron
GAATGTGAATTGCAGATTGT+GGG 0.552420 5.4:-20364360 MS.gene027893:intron
GAAAGGCCTCAACCAAGGCC+AGG 0.557056 5.4:-20364938 MS.gene027893:CDS
CCTACATTATCAACAGTGCA+AGG 0.564703 5.4:-20364976 MS.gene027893:CDS
AAGGAGACAATTAACAGCAA+TGG 0.585369 5.4:-20364313 MS.gene027893:CDS
GAATGAGATTCAGAAGCACT+TGG 0.586269 5.4:-20365017 MS.gene027893:CDS
AGCAATGGCATCAGATTCTG+AGG 0.610535 5.4:-20364298 MS.gene027893:CDS
TGAATGAAAGGCCTCAACCA+AGG 0.613108 5.4:-20364943 MS.gene027893:CDS
AACAATGGTTTCAACCATGG+TGG 0.622605 5.4:+20365580 None:intergenic
TATGGGTTGAACAGATTCGG+AGG 0.624526 5.4:-20365066 MS.gene027893:intron
GAAGACAAACCTGAATGTAA+CGG 0.653422 5.4:+20365431 None:intergenic
AGAACCGGAAGGAATCAAGA+AGG 0.656588 5.4:+20364876 None:intergenic
CTACATTATCAACAGTGCAA+GGG 0.657965 5.4:-20364975 MS.gene027893:CDS
ACCACATAGAGCCCCATTGG+GGG 0.661326 5.4:-20364154 MS.gene027893:CDS
TACCACATAGAGCCCCATTG+GGG 0.680294 5.4:-20364155 MS.gene027893:CDS
CCACATAGAGCCCCATTGGG+GGG 0.682285 5.4:-20364153 MS.gene027893:CDS
ATGATAACAGATGGCCACCA+TGG 0.683499 5.4:-20365594 MS.gene027893:CDS
ACCAAGAGAACAGAACCGGA+AGG 0.684862 5.4:+20364865 None:intergenic
TCTGTAATTAACTGAAGTTG+GGG 0.688523 5.4:+20364200 None:intergenic
AATGTGAATTGCAGATTGTG+GGG 0.690938 5.4:-20364359 MS.gene027893:intron
CTGATGATGATGATAACAGA+TGG 0.692210 5.4:-20365603 MS.gene027893:CDS
GACAAACCTGAATGTAACGG+TGG 0.716496 5.4:+20365434 None:intergenic
GCAAGACAGAGAGAACAGAG+AGG 0.742658 5.4:+20365469 None:intergenic
CTGTAATTAACTGAAGTTGG+GGG 0.746847 5.4:+20364201 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTATACATTAAACATCAA+TGG + chr5.4:20364828-20364847 None:intergenic 15.0%
!!! AAAGTTTGTTTTTTTTGTAT+GGG - chr5.4:20364856-20364875 MS.gene027893:intron 15.0%
!!! TAAAGTTTGTTTTTTTTGTA+TGG - chr5.4:20364855-20364874 MS.gene027893:intron 15.0%
!! AATAATTGATGAGAATACAT+TGG + chr5.4:20365133-20365152 None:intergenic 20.0%
!! TGAATGTAATATGTATTGTT+TGG - chr5.4:20364433-20364452 MS.gene027893:intron 20.0%
!!! ATAGATTCGTTCTTTTTTTT+GGG - chr5.4:20364613-20364632 MS.gene027893:intron 20.0%
!!! CTAGTAAAGAAACTTTTTAT+GGG - chr5.4:20365348-20365367 MS.gene027893:intron 20.0%
!!! TATAGATTCGTTCTTTTTTT+TGG - chr5.4:20364612-20364631 MS.gene027893:intron 20.0%
!!! TTTGATTTGGTTTTTGAATA+GGG - chr5.4:20364302-20364321 MS.gene027893:CDS 20.0%
!!! TTTTGATTTGGTTTTTGAAT+AGG - chr5.4:20364301-20364320 MS.gene027893:CDS 20.0%
! AATTAGACATTAGACATCAA+TGG + chr5.4:20364771-20364790 None:intergenic 25.0%
! ATTAAACAACCATGAATGTT+GGG - chr5.4:20365474-20365493 MS.gene027893:CDS 25.0%
! GTATCCTTCAATTTAATCTT+TGG - chr5.4:20365433-20365452 MS.gene027893:intron 25.0%
! TATGCCAAAGATTAAATTGA+AGG + chr5.4:20365440-20365459 None:intergenic 25.0%
! TATTGTTTGGATTGTATGAA+TGG - chr5.4:20364446-20364465 MS.gene027893:intron 25.0%
! TTCTGTAATTAACTGAAGTT+GGG + chr5.4:20365743-20365762 None:intergenic 25.0%
!! CTAATAATCTGACACATTTT+TGG - chr5.4:20364576-20364595 MS.gene027893:intron 25.0%
!! GCTAGTAAAGAAACTTTTTA+TGG - chr5.4:20365347-20365366 MS.gene027893:intron 25.0%
!!! AGTTATGATTTTGACAAAGA+TGG + chr5.4:20365521-20365540 None:intergenic 25.0%
!!! TCTAAGTGTTATTCTGAAAT+AGG - chr5.4:20364679-20364698 MS.gene027893:intron 25.0%
AAGAAAGCTTCTTTCAACAA+TGG + chr5.4:20364377-20364396 None:intergenic 30.0%
AATAGCTGAAAATCAGCAAA+AGG + chr5.4:20364721-20364740 None:intergenic 30.0%
AATTGATGAGAATACATTGG+TGG + chr5.4:20365130-20365149 None:intergenic 30.0%
CATTAAACAACCATGAATGT+TGG - chr5.4:20365473-20365492 MS.gene027893:CDS 30.0%
GTTCTGTAATTAACTGAAGT+TGG + chr5.4:20365744-20365763 None:intergenic 30.0%
TATTCAAATCCCAACATTCA+TGG + chr5.4:20365486-20365505 None:intergenic 30.0%
TCTGTAATTAACTGAAGTTG+GGG + chr5.4:20365742-20365761 None:intergenic 30.0%
TTCATACCATGATGTGATAA+GGG - chr5.4:20364898-20364917 MS.gene027893:CDS 30.0%
! ACTATAACAATGTTTTGTGG+CGG - chr5.4:20365238-20365257 MS.gene027893:intron 30.0%
! TGCACTATAACAATGTTTTG+TGG - chr5.4:20365235-20365254 MS.gene027893:intron 30.0%
! TTAATTGTCTCCTTTTCTTC+TGG + chr5.4:20365620-20365639 None:intergenic 30.0%
!! GAACTTTGATTTTCTTCTGA+CGG + chr5.4:20365695-20365714 None:intergenic 30.0%
!!! GAGGTTGACTTTTTCATAAT+GGG - chr5.4:20365386-20365405 MS.gene027893:intron 30.0%
!!! TGAGGTTGACTTTTTCATAA+TGG - chr5.4:20365385-20365404 MS.gene027893:intron 30.0%
AAGGAGACAATTAACAGCAA+TGG - chr5.4:20365626-20365645 MS.gene027893:intron 35.0%
AATGTGAATTGCAGATTGTG+GGG - chr5.4:20365580-20365599 MS.gene027893:CDS 35.0%
ATGGTATGCACAATTCTTGA+TGG - chr5.4:20364197-20364216 MS.gene027893:CDS 35.0%
CATCTGTTATCATCATCATC+AGG + chr5.4:20364338-20364357 None:intergenic 35.0%
CTAAGAACTTCCAGAAGAAA+AGG - chr5.4:20365607-20365626 MS.gene027893:CDS 35.0%
CTACATTATCAACAGTGCAA+GGG - chr5.4:20364964-20364983 MS.gene027893:CDS 35.0%
CTGAACAAATCGCTATTGTT+TGG - chr5.4:20365165-20365184 MS.gene027893:intron 35.0%
CTGTAATTAACTGAAGTTGG+GGG + chr5.4:20365741-20365760 None:intergenic 35.0%
CTTCATACCATGATGTGATA+AGG - chr5.4:20364897-20364916 MS.gene027893:CDS 35.0%
GAAGACAAACCTGAATGTAA+CGG + chr5.4:20364511-20364530 None:intergenic 35.0%
GAATGTGAATTGCAGATTGT+GGG - chr5.4:20365579-20365598 MS.gene027893:CDS 35.0%
GAGAAATCAAACCAAAGAAC+AGG - chr5.4:20364168-20364187 MS.gene027893:CDS 35.0%
GCAAGGTAATTTACCTTACT+TGG - chr5.4:20365098-20365117 MS.gene027893:intron 35.0%
TGAATGTGAATTGCAGATTG+TGG - chr5.4:20365578-20365597 MS.gene027893:CDS 35.0%
TGGGTTAAAATGAGTTGTTG+AGG - chr5.4:20365367-20365386 MS.gene027893:intron 35.0%
TGGTATGCACAATTCTTGAT+GGG - chr5.4:20364198-20364217 MS.gene027893:CDS 35.0%
TTCAACAATGGTTTCAACCA+TGG + chr5.4:20364365-20364384 None:intergenic 35.0%
TTGGTGGAATAAACCAAGTA+AGG + chr5.4:20365114-20365133 None:intergenic 35.0%
! CTGATGATGATGATAACAGA+TGG - chr5.4:20364336-20364355 MS.gene027893:CDS 35.0%
! TTGTATGGGTTGAACAGATT+CGG - chr5.4:20364870-20364889 MS.gene027893:CDS 35.0%
!! GGGTTGTGTTTTTGAATGAA+AGG - chr5.4:20364984-20365003 MS.gene027893:CDS 35.0%
!!! CTGACACATTTTTGGTTCAT+GGG - chr5.4:20364584-20364603 MS.gene027893:intron 35.0%
!!! TCTGACACATTTTTGGTTCA+TGG - chr5.4:20364583-20364602 MS.gene027893:intron 35.0%
AACAATGGTTTCAACCATGG+TGG + chr5.4:20364362-20364381 None:intergenic 40.0%
ACCAAAGAACAGGAGAATCA+TGG - chr5.4:20364178-20364197 MS.gene027893:CDS 40.0%
ACCATGATTCTCCTGTTCTT+TGG + chr5.4:20364182-20364201 None:intergenic 40.0%
AGAACAGCCAAGAGAAGAAA+GGG - chr5.4:20365759-20365778 MS.gene027893:intron 40.0%
CAAGAGTCTCGTGAATCAAA+TGG + chr5.4:20365414-20365433 None:intergenic 40.0%
CATTCACCCTTATCACATCA+TGG + chr5.4:20364907-20364926 None:intergenic 40.0%
CCTACATTATCAACAGTGCA+AGG - chr5.4:20364963-20364982 MS.gene027893:CDS 40.0%
CTCAGCACAGAAAACAAAAG+TGG + chr5.4:20364658-20364677 None:intergenic 40.0%
GCTATAACAATGTTGTGTGG+CGG + chr5.4:20365281-20365300 None:intergenic 40.0%
TAATTAACTGAAGTTGGGGG+TGG + chr5.4:20365738-20365757 None:intergenic 40.0%
TGCGCTATAACAATGTTGTG+TGG + chr5.4:20365284-20365303 None:intergenic 40.0%
TGGTATTCCCTTTCTTCTCT+TGG + chr5.4:20365769-20365788 None:intergenic 40.0%
! TGGTTTGATTTCTCTGACAC+TGG + chr5.4:20364162-20364181 None:intergenic 40.0%
!! CCTTGCACTGTTGATAATGT+AGG + chr5.4:20364966-20364985 None:intergenic 40.0%
!! GAATGAGATTCAGAAGCACT+TGG - chr5.4:20364922-20364941 MS.gene027893:CDS 40.0%
!! TTGGTTTTTGAATAGGGTGC+TGG - chr5.4:20364308-20364327 MS.gene027893:CDS 40.0%
AATACCACATAGAGCCCCAT+TGG - chr5.4:20365782-20365801 MS.gene027893:CDS 45.0%
AGAACCGGAAGGAATCAAGA+AGG + chr5.4:20365066-20365085 None:intergenic 45.0%
AGCAATGGCATCAGATTCTG+AGG - chr5.4:20365641-20365660 MS.gene027893:intron 45.0%
ATACCACATAGAGCCCCATT+GGG - chr5.4:20365783-20365802 MS.gene027893:CDS 45.0%
ATGATAACAGATGGCCACCA+TGG - chr5.4:20364345-20364364 MS.gene027893:CDS 45.0%
CAAAGACCACCGTTACATTC+AGG - chr5.4:20364499-20364518 MS.gene027893:intron 45.0%
CAGAACAGCCAAGAGAAGAA+AGG - chr5.4:20365758-20365777 MS.gene027893:intron 45.0%
CGCAGCTATAGTGAGAACAT+TGG - chr5.4:20365300-20365319 MS.gene027893:intron 45.0%
GAATGTAACGGTGGTCTTTG+TGG + chr5.4:20364499-20364518 None:intergenic 45.0%
GACAAACCTGAATGTAACGG+TGG + chr5.4:20364508-20364527 None:intergenic 45.0%
GTAGCCTTCTTGATTCCTTC+CGG - chr5.4:20365059-20365078 MS.gene027893:intron 45.0%
GTTCTGTTCTCTTGGTTGCA+AGG - chr5.4:20365081-20365100 MS.gene027893:intron 45.0%
TGAATGAAAGGCCTCAACCA+AGG - chr5.4:20364996-20365015 MS.gene027893:CDS 45.0%
TGCAACCAAGAGAACAGAAC+CGG + chr5.4:20365081-20365100 None:intergenic 45.0%
! GTGTTTGTGACACCTTTTCC+TGG + chr5.4:20365022-20365041 None:intergenic 45.0%
! TATGGGTTGAACAGATTCGG+AGG - chr5.4:20364873-20364892 MS.gene027893:CDS 45.0%
!!! GTTTTTGAATAGGGTGCTGG+AGG - chr5.4:20364311-20364330 MS.gene027893:CDS 45.0%
!!! TTTTTTAAATTTTTTTGATT+TGG - chr5.4:20364289-20364308 MS.gene027893:CDS 5.0%
ACCAAGAGAACAGAACCGGA+AGG + chr5.4:20365077-20365096 None:intergenic 50.0%
CTAGATCAAGTCCCCCCAAT+GGG + chr5.4:20365800-20365819 None:intergenic 50.0%
GCAAGACAGAGAGAACAGAG+AGG + chr5.4:20364473-20364492 None:intergenic 50.0%
TACCACATAGAGCCCCATTG+GGG - chr5.4:20365784-20365803 MS.gene027893:CDS 50.0%
TAGATCAAGTCCCCCCAATG+GGG + chr5.4:20365799-20365818 None:intergenic 50.0%
TCCTTCCGGTTCTGTTCTCT+TGG - chr5.4:20365073-20365092 MS.gene027893:intron 50.0%
TCTAGATCAAGTCCCCCCAA+TGG + chr5.4:20365801-20365820 None:intergenic 50.0%
!! CAGAAGCACTTGGACATTGC+TGG - chr5.4:20364932-20364951 MS.gene027893:CDS 50.0%
ACCACATAGAGCCCCATTGG+GGG - chr5.4:20365785-20365804 MS.gene027893:CDS 55.0%
CCTCAACCAAGGCCAGGAAA+AGG - chr5.4:20365007-20365026 MS.gene027893:CDS 55.0%
GAAGTTGGGGGTGGTGTAGA+TGG + chr5.4:20365729-20365748 None:intergenic 55.0%
! GTGACACCTTTTCCTGGCCT+TGG + chr5.4:20365016-20365035 None:intergenic 55.0%
!!! CCTTTTCCTGGCCTTGGTTG+AGG + chr5.4:20365010-20365029 None:intergenic 55.0%
CCACATAGAGCCCCATTGGG+GGG - chr5.4:20365786-20365805 MS.gene027893:CDS 60.0%
GAAAGGCCTCAACCAAGGCC+AGG - chr5.4:20365001-20365020 MS.gene027893:CDS 60.0%
CCCCCCAATGGGGCTCTATG+TGG + chr5.4:20365789-20365808 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 20364134 20365827 20364134 ID=MS.gene027893
chr5.4 mRNA 20364134 20365827 20364134 ID=MS.gene027893.t1;Parent=MS.gene027893
chr5.4 exon 20365762 20365827 20365762 ID=MS.gene027893.t1.exon1;Parent=MS.gene027893.t1
chr5.4 CDS 20365762 20365827 20365762 ID=cds.MS.gene027893.t1;Parent=MS.gene027893.t1
chr5.4 exon 20365441 20365638 20365441 ID=MS.gene027893.t1.exon2;Parent=MS.gene027893.t1
chr5.4 CDS 20365441 20365638 20365441 ID=cds.MS.gene027893.t1;Parent=MS.gene027893.t1
chr5.4 exon 20364859 20365074 20364859 ID=MS.gene027893.t1.exon3;Parent=MS.gene027893.t1
chr5.4 CDS 20364859 20365074 20364859 ID=cds.MS.gene027893.t1;Parent=MS.gene027893.t1
chr5.4 exon 20364134 20364367 20364134 ID=MS.gene027893.t1.exon4;Parent=MS.gene027893.t1
chr5.4 CDS 20364134 20364367 20364134 ID=cds.MS.gene027893.t1;Parent=MS.gene027893.t1
Gene Sequence

>MS.gene027893

ATGGCAATTGAAAATCAAGAAAACACCAGTGTCAGAGAAATCAAACCAAAGAACAGGAGAATCATGGTATGCACAATTCTTGATGGGTTTTTTGTTTTGTTAATGTTAATGTGTTCTGTTTTTTTCTACATTGTATTATGTTCTGTTTTTATTGATTTTTTAAATTTTTTTGATTTGGTTTTTGAATAGGGTGCTGGAGGACCTGATGATGATGATAACAGATGGCCACCATGGTTGAAACCATTGTTGAAAGAAGCTTTCTTTGTTCAATGCAAGATACATGCTGATTCTCACAAGAGTGAATGTAATATGTATTGTTTGGATTGTATGAATGGTCCTCTCTGTTCTCTCTGTCTTGCTTACCACAAAGACCACCGTTACATTCAGGTTTGTCTTCATTGTTCAATCAATTCATAAAAAAAATTTACTTTTTGTAGAAAAACTAATAATCTGACACATTTTTGGTTCATGGGCTACTTATAGATTCGTTCTTTTTTTTGGGTTGATTTCAGTTAAAAGTTCCACTTTTGTTTTCTGTGCTGAGATCTAAGTGTTATTCTGAAATAGGTTTATAAAAAATGTGACCTTTTGCTGATTTTCAGCTATTTTTTCAATGTGTGTGAATAATGTTTAACCATTGATGTCTAATGTCTAATTAATGTGCTAAAGTTTGTATTTTTGTGTGTTTTAACCATTGATGTTTAATGTATAATTAATGTGCTAAAGTTTGTTTTTTTTGTATGGGTTGAACAGATTCGGAGGTCTTCATACCATGATGTGATAAGGGTGAATGAGATTCAGAAGCACTTGGACATTGCTGGTGTTCAAACCTACATTATCAACAGTGCAAGGGTTGTGTTTTTGAATGAAAGGCCTCAACCAAGGCCAGGAAAAGGTGTCACAAACACTTGTGAAGTTTGTGAGCGTAGCCTTCTTGATTCCTTCCGGTTCTGTTCTCTTGGTTGCAAGGTAATTTACCTTACTTGGTTTATTCCACCAATGTATTCTCATCAATTATTTTGTAGCAGAATCTGAACAAATCGCTATTGTTTGGCTATACACACTATAGCGCAGCTATAGTGAGCTATAGTGAGCTATAGCTGCACTATAACAATGTTTTGTGGCGGAATTTGAACAAACTACTCCGCCACACAACATTGTTATAGCGCAGCTATAGTGAGAACATTGGATGATGTATTTGCTTTCTTTTCAAGCTAGTAAAGAAACTTTTTATGGGTTAAAATGAGTTGTTGAGGTTGACTTTTTCATAATGGGTACCATTTGATTCACGAGACTCTTGTATCCTTCAATTTAATCTTTGGCATAATTTTCTTCAAAGCATTAAACAACCATGAATGTTGGGATTTGAATATTGACTTATAATCCATCTTTGTCAAAATCATAACTATTATGTGTTCAACAAGTTTATGTTAATCAATCAATGTGAATGTGAATTGCAGATTGTGGGGACATCTAAGAACTTCCAGAAGAAAAGGAGACAATTAACAGCAATGGCATCAGATTCTGAGGAGTCATACAGTAGCAACAACATTCATAGCCGTCAGAAGAAAATCAAAGTTCAAAGCTTCACACCATCTACACCACCCCCAACTTCAGTTAATTACAGAACAGCCAAGAGAAGAAAGGGAATACCACATAGAGCCCCATTGGGGGGACTTGATCTAGATTATTAG
Protein sequence

>MS.gene027893.t1

MAIENQENTSVREIKPKNRRIMGAGGPDDDDNRWPPWLKPLLKEAFFVQCKIHADSHKSECNMYCLDCMNGPLCSLCLAYHKDHRYIQIRRSSYHDVIRVNEIQKHLDIAGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSFRFCSLGCKIVGTSKNFQKKRRQLTAMASDSEESYSSNNIHSRQKKIKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPLGGLDLDY