Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027925.t1 | AAV73838.1 | 98.6 | 502 | 0 | 1 | 1 | 495 | 1 | 502 | 1.10E-258 | 902.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027925.t1 | Q40152 | 54.9 | 499 | 164 | 14 | 30 | 486 | 37 | 516 | 2.3e-111 | 404.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027925.t1 | Q4L0F7 | 98.6 | 502 | 0 | 1 | 1 | 495 | 1 | 502 | 8.1e-259 | 902.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene027925.t1 | TF | HSF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027925.t1 | MTR_5g029680 | 96.215 | 502 | 12 | 1 | 1 | 495 | 1 | 502 | 0.0 | 988 |
| MS.gene027925.t1 | MTR_4g077970 | 45.709 | 501 | 211 | 19 | 31 | 492 | 11 | 489 | 2.12e-117 | 354 |
| MS.gene027925.t1 | MTR_7g095680 | 54.978 | 231 | 93 | 2 | 9 | 232 | 26 | 252 | 1.39e-80 | 255 |
| MS.gene027925.t1 | MTR_1g102860 | 54.043 | 235 | 88 | 6 | 10 | 234 | 16 | 240 | 1.93e-74 | 238 |
| MS.gene027925.t1 | MTR_3g104550 | 54.222 | 225 | 80 | 6 | 19 | 233 | 33 | 244 | 1.94e-73 | 237 |
| MS.gene027925.t1 | MTR_1g061170 | 47.773 | 247 | 108 | 5 | 18 | 257 | 35 | 267 | 1.64e-67 | 224 |
| MS.gene027925.t1 | MTR_8g105780 | 43.911 | 271 | 127 | 7 | 32 | 293 | 22 | 276 | 3.72e-59 | 199 |
| MS.gene027925.t1 | MTR_1g071360 | 46.725 | 229 | 93 | 5 | 19 | 237 | 19 | 228 | 8.16e-58 | 195 |
| MS.gene027925.t1 | MTR_1g071360 | 46.725 | 229 | 93 | 5 | 19 | 237 | 16 | 225 | 1.35e-57 | 195 |
| MS.gene027925.t1 | MTR_8g087540 | 50.538 | 186 | 74 | 3 | 31 | 207 | 11 | 187 | 6.88e-56 | 192 |
| MS.gene027925.t1 | MTR_6g043060 | 47.867 | 211 | 89 | 5 | 32 | 235 | 22 | 218 | 1.24e-55 | 189 |
| MS.gene027925.t1 | MTR_2g100680 | 45.116 | 215 | 98 | 3 | 26 | 233 | 25 | 226 | 9.75e-55 | 190 |
| MS.gene027925.t1 | MTR_8g083100 | 48.095 | 210 | 88 | 5 | 33 | 235 | 23 | 218 | 1.03e-54 | 191 |
| MS.gene027925.t1 | MTR_2g100670 | 47.980 | 198 | 85 | 2 | 20 | 210 | 21 | 207 | 1.67e-54 | 185 |
| MS.gene027925.t1 | MTR_2g100670 | 48.958 | 192 | 80 | 2 | 26 | 210 | 135 | 315 | 2.07e-53 | 186 |
| MS.gene027925.t1 | MTR_6g086805 | 42.723 | 213 | 101 | 6 | 28 | 233 | 7 | 205 | 8.91e-47 | 166 |
| MS.gene027925.t1 | MTR_4g077970 | 37.293 | 362 | 176 | 16 | 162 | 492 | 1 | 342 | 1.65e-44 | 160 |
| MS.gene027925.t1 | MTR_2g017890 | 41.622 | 185 | 97 | 3 | 31 | 208 | 14 | 194 | 2.02e-43 | 158 |
| MS.gene027925.t1 | MTR_3g101870 | 39.594 | 197 | 64 | 3 | 29 | 170 | 21 | 217 | 1.31e-37 | 142 |
| MS.gene027925.t1 | MTR_5g010680 | 65.957 | 94 | 25 | 1 | 30 | 116 | 22 | 115 | 6.54e-37 | 139 |
| MS.gene027925.t1 | MTR_1g061170 | 44.318 | 176 | 84 | 4 | 82 | 257 | 11 | 172 | 2.58e-36 | 138 |
| MS.gene027925.t1 | MTR_5g089170 | 42.408 | 191 | 91 | 3 | 29 | 200 | 22 | 212 | 1.23e-35 | 133 |
| MS.gene027925.t1 | MTR_5g017470 | 42.458 | 179 | 64 | 4 | 29 | 171 | 6 | 181 | 3.45e-34 | 130 |
| MS.gene027925.t1 | MTR_1g100777 | 60.638 | 94 | 30 | 1 | 30 | 116 | 16 | 109 | 4.56e-34 | 130 |
| MS.gene027925.t1 | MTR_7g091370 | 44.737 | 152 | 75 | 2 | 29 | 171 | 19 | 170 | 5.84e-34 | 128 |
| MS.gene027925.t1 | MTR_0020s0020 | 59.574 | 94 | 31 | 1 | 30 | 116 | 31 | 124 | 2.37e-32 | 127 |
| MS.gene027925.t1 | MTR_4g088900 | 33.702 | 181 | 95 | 4 | 29 | 198 | 30 | 196 | 7.37e-25 | 102 |
| MS.gene027925.t1 | MTR_4g045757 | 68.421 | 57 | 18 | 0 | 28 | 84 | 10 | 66 | 1.93e-21 | 88.6 |
| MS.gene027925.t1 | MTR_5g047190 | 43.299 | 97 | 41 | 1 | 40 | 122 | 1 | 97 | 4.76e-21 | 88.2 |
| MS.gene027925.t1 | MTR_6g044340 | 34.783 | 161 | 89 | 5 | 75 | 235 | 14 | 158 | 2.46e-19 | 88.2 |
| MS.gene027925.t1 | MTR_2g043940 | 32.609 | 138 | 87 | 3 | 70 | 207 | 9 | 140 | 2.98e-17 | 84.0 |
| MS.gene027925.t1 | MTR_1g061170 | 40.625 | 96 | 52 | 2 | 162 | 257 | 1 | 91 | 3.59e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027925.t1 | AT1G32330 | 52.652 | 509 | 168 | 15 | 9 | 489 | 11 | 474 | 6.78e-158 | 457 |
| MS.gene027925.t1 | AT1G32330 | 52.652 | 509 | 168 | 15 | 9 | 489 | 11 | 474 | 1.06e-157 | 457 |
| MS.gene027925.t1 | AT4G17750 | 47.834 | 531 | 189 | 16 | 1 | 494 | 16 | 495 | 1.89e-137 | 405 |
| MS.gene027925.t1 | AT5G16820 | 48.928 | 513 | 190 | 15 | 18 | 494 | 4 | 480 | 2.00e-128 | 382 |
| MS.gene027925.t1 | AT5G16820 | 48.928 | 513 | 190 | 15 | 18 | 494 | 4 | 480 | 2.00e-128 | 382 |
| MS.gene027925.t1 | AT3G02990 | 47.347 | 490 | 188 | 19 | 31 | 494 | 22 | 467 | 3.36e-117 | 353 |
| MS.gene027925.t1 | AT3G22830 | 53.982 | 226 | 96 | 2 | 14 | 232 | 43 | 267 | 1.91e-75 | 243 |
| MS.gene027925.t1 | AT2G26150 | 55.157 | 223 | 85 | 4 | 19 | 233 | 31 | 246 | 2.45e-74 | 238 |
| MS.gene027925.t1 | AT2G26150 | 55.157 | 223 | 85 | 4 | 19 | 233 | 31 | 246 | 2.45e-74 | 238 |
| MS.gene027925.t1 | AT3G51910 | 49.309 | 217 | 79 | 5 | 25 | 232 | 22 | 216 | 1.94e-60 | 200 |
| MS.gene027925.t1 | AT5G03720 | 44.000 | 250 | 122 | 4 | 14 | 256 | 37 | 275 | 1.40e-59 | 202 |
| MS.gene027925.t1 | AT5G03720 | 44.000 | 250 | 122 | 4 | 14 | 256 | 37 | 275 | 1.40e-59 | 202 |
| MS.gene027925.t1 | AT1G67970 | 50.521 | 192 | 80 | 4 | 32 | 215 | 19 | 203 | 2.03e-55 | 190 |
| MS.gene027925.t1 | AT4G13980 | 43.805 | 226 | 95 | 6 | 33 | 248 | 24 | 227 | 1.79e-54 | 190 |
| MS.gene027925.t1 | AT3G63350 | 43.602 | 211 | 99 | 3 | 18 | 219 | 12 | 211 | 1.78e-52 | 179 |
| MS.gene027925.t1 | AT5G43840 | 40.081 | 247 | 110 | 6 | 18 | 257 | 5 | 220 | 2.26e-51 | 176 |
| MS.gene027925.t1 | AT4G18880 | 42.723 | 213 | 106 | 3 | 25 | 227 | 8 | 214 | 4.33e-47 | 168 |
| MS.gene027925.t1 | AT5G45710 | 35.664 | 286 | 147 | 6 | 31 | 304 | 12 | 272 | 1.53e-45 | 162 |
| MS.gene027925.t1 | AT5G45710 | 35.664 | 286 | 147 | 6 | 31 | 304 | 12 | 272 | 1.53e-45 | 162 |
| MS.gene027925.t1 | AT3G24520 | 40.385 | 208 | 87 | 3 | 32 | 232 | 17 | 194 | 1.36e-44 | 160 |
| MS.gene027925.t1 | AT5G54070 | 41.204 | 216 | 99 | 4 | 32 | 236 | 71 | 269 | 1.40e-44 | 160 |
| MS.gene027925.t1 | AT2G26150 | 54.667 | 150 | 60 | 3 | 85 | 233 | 49 | 191 | 4.35e-42 | 152 |
| MS.gene027925.t1 | AT2G26150 | 54.667 | 150 | 60 | 3 | 85 | 233 | 49 | 191 | 4.35e-42 | 152 |
| MS.gene027925.t1 | AT1G46264 | 41.361 | 191 | 61 | 4 | 29 | 170 | 31 | 219 | 6.04e-37 | 139 |
| MS.gene027925.t1 | AT2G41690 | 38.710 | 186 | 83 | 3 | 30 | 188 | 38 | 219 | 3.25e-34 | 129 |
| MS.gene027925.t1 | AT4G11660 | 60.638 | 94 | 30 | 1 | 30 | 116 | 57 | 150 | 2.50e-33 | 130 |
| MS.gene027925.t1 | AT4G36990 | 51.639 | 122 | 39 | 2 | 29 | 143 | 11 | 119 | 9.28e-33 | 126 |
| MS.gene027925.t1 | AT5G62020 | 55.556 | 99 | 37 | 1 | 30 | 121 | 21 | 119 | 1.83e-32 | 126 |
| MS.gene027925.t1 | AT4G18870 | 48.864 | 88 | 38 | 2 | 32 | 112 | 146 | 233 | 9.93e-23 | 98.6 |
| MS.gene027925.t1 | AT4G18870 | 50.000 | 86 | 37 | 2 | 33 | 112 | 14 | 99 | 1.01e-21 | 95.9 |
| MS.gene027925.t1 | AT1G77570 | 40.000 | 90 | 44 | 2 | 33 | 112 | 27 | 116 | 5.01e-15 | 72.8 |
Find 140 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTTGTTAAGCAATTCTATT+TGG | 0.145481 | 5.4:-20002741 | MS.gene027925:CDS |
| TCGGTGTCGGCGCCGGTATT+TGG | 0.178029 | 5.4:+20007008 | None:intergenic |
| AAAATTTCAAACAGGGTTTC+AGG | 0.206273 | 5.4:-20003797 | MS.gene027925:intron |
| CCAACAACAGTTTCGTTGTT+TGG | 0.230125 | 5.4:-20006892 | MS.gene027925:CDS |
| TGTGTAGAAGTCGGCAAATT+TGG | 0.235613 | 5.4:-20003621 | MS.gene027925:CDS |
| TGAGGTACAGATAGAATTTC+AGG | 0.240310 | 5.4:+20003009 | None:intergenic |
| CGAGACAGATGATGGATTTA+TGG | 0.242553 | 5.4:-20002830 | MS.gene027925:CDS |
| TCACCAATCAAGTAATTATC+AGG | 0.249130 | 5.4:+20003183 | None:intergenic |
| CATAGATGATTAAATTCTTT+TGG | 0.258523 | 5.4:+20002561 | None:intergenic |
| CAAAAGGTCCCTAGCGAATT+CGG | 0.275635 | 5.4:+20006862 | None:intergenic |
| TGGATCATTACCCATTGATT+TGG | 0.296226 | 5.4:-20002794 | MS.gene027925:CDS |
| TTTGCTGTTTCATTCATCAT+AGG | 0.311359 | 5.4:+20003267 | None:intergenic |
| CAACAACAGTTTCGTTGTTT+GGG | 0.319788 | 5.4:-20006891 | MS.gene027925:CDS |
| CGGTGTCGGCGCCGGTATTT+GGG | 0.322223 | 5.4:+20007009 | None:intergenic |
| CAACAGATGCGATAGTTTCA+TGG | 0.344788 | 5.4:-20006922 | MS.gene027925:CDS |
| AACCCTGATAATTACTTGAT+TGG | 0.346275 | 5.4:-20003186 | MS.gene027925:CDS |
| GTCGTTGCTCCATTCCTTGA+AGG | 0.347154 | 5.4:+20003481 | None:intergenic |
| GCCTCAAAATCCTCTGGAAT+TGG | 0.349084 | 5.4:+20002700 | None:intergenic |
| GTGTAGAAGTCGGCAAATTT+GGG | 0.362865 | 5.4:-20003620 | MS.gene027925:CDS |
| TATACCTGAAGACAATTATA+TGG | 0.363191 | 5.4:-20002857 | MS.gene027925:CDS |
| ACCAGGGCTTTGGACGGCTT+TGG | 0.378818 | 5.4:+20003434 | None:intergenic |
| TTTGCAAATTCCCAACGATC+TGG | 0.381736 | 5.4:+20003765 | None:intergenic |
| TCTGGTACTGAAGGTATATC+AGG | 0.389774 | 5.4:+20002904 | None:intergenic |
| TCTGCTCTGTTAGTTGATCC+AGG | 0.390931 | 5.4:+20002605 | None:intergenic |
| CAAATTTGGGCTTGAGGAAG+AGG | 0.394429 | 5.4:-20003607 | MS.gene027925:CDS |
| ACTCAAATTCCAATGTCAAC+AGG | 0.397967 | 5.4:-20003063 | MS.gene027925:CDS |
| TTTGTTAAGCAATTCTATTT+GGG | 0.398896 | 5.4:-20002740 | MS.gene027925:CDS |
| GAGCAAAGAAACCAGGGCTT+TGG | 0.405473 | 5.4:+20003424 | None:intergenic |
| TGCTAAGGAAGATCATGAAA+TGG | 0.411880 | 5.4:-20003239 | MS.gene027925:CDS |
| GAGGTGCAGCCAACAGAAAA+TGG | 0.412142 | 5.4:-20002649 | MS.gene027925:CDS |
| TATTTAACAATTTGTCCATC+AGG | 0.412857 | 5.4:+20003294 | None:intergenic |
| GGAGCCATATAATTGTCTTC+AGG | 0.427662 | 5.4:+20002853 | None:intergenic |
| GCTTGAAGAACTTCGGCAAA+AGG | 0.436166 | 5.4:+20006846 | None:intergenic |
| AACAACAAAATGACAGCAAT+AGG | 0.448374 | 5.4:-20003392 | MS.gene027925:CDS |
| GAAACTATCGCATCTGTTGA+AGG | 0.449248 | 5.4:+20006926 | None:intergenic |
| TGCAGCCAACAGAAAATGGC+TGG | 0.460415 | 5.4:-20002645 | MS.gene027925:CDS |
| TGAAAGACAATCCAAATCAA+TGG | 0.461549 | 5.4:+20002783 | None:intergenic |
| GGCGCGTTCGCGTTTAGCAT+CGG | 0.464774 | 5.4:+20006989 | None:intergenic |
| GATGGAGCAAGCGGCGGAAG+TGG | 0.466736 | 5.4:-20007052 | MS.gene027925:CDS |
| ACAATGGTTCAGCGCCTTCA+AGG | 0.468085 | 5.4:-20003495 | MS.gene027925:CDS |
| GCTGAACCATTGTTTGCAGC+TGG | 0.470479 | 5.4:+20003505 | None:intergenic |
| GAAGGTTGACCCAGATCGTT+GGG | 0.471844 | 5.4:-20003775 | MS.gene027925:CDS |
| CCATGGTCATACTCAACAAC+AGG | 0.472356 | 5.4:-20003682 | MS.gene027925:CDS |
| CGTTGGGAATTTGCAAATGA+GGG | 0.474986 | 5.4:-20003759 | MS.gene027925:CDS |
| ATGTTGGCCTCAAAATCCTC+TGG | 0.479139 | 5.4:+20002694 | None:intergenic |
| GCTAAGGAAGATCATGAAAT+GGG | 0.481953 | 5.4:-20003238 | MS.gene027925:CDS |
| GGCGGAAGTGGCGGCGGAGA+GGG | 0.482090 | 5.4:-20007040 | MS.gene027925:CDS |
| GAAAGACAATCCAAATCAAT+GGG | 0.486613 | 5.4:+20002784 | None:intergenic |
| GCCAAAGCCGTCCAAAGCCC+TGG | 0.488993 | 5.4:-20003435 | MS.gene027925:CDS |
| CGGCGGAAGTGGCGGCGGAG+AGG | 0.492052 | 5.4:-20007041 | MS.gene027925:CDS |
| ATAACATCTGCTTGAGAAGT+CGG | 0.493923 | 5.4:+20002931 | None:intergenic |
| TGGCTGCACCTCATTCCCTC+TGG | 0.494605 | 5.4:+20002660 | None:intergenic |
| CCAAACAACGAAACTGTTGT+TGG | 0.495551 | 5.4:+20006892 | None:intergenic |
| TTTAGCATCGGTGTCGGCGC+CGG | 0.495901 | 5.4:+20007001 | None:intergenic |
| CGAAATATCCAGAGGGAATG+AGG | 0.497477 | 5.4:-20002668 | MS.gene027925:CDS |
| AAAAGGTCCCTAGCGAATTC+GGG | 0.501028 | 5.4:+20006863 | None:intergenic |
| TAACATCTGCTTGAGAAGTC+GGG | 0.501630 | 5.4:+20002932 | None:intergenic |
| GGGACCCACCCGAATTCGCT+AGG | 0.503998 | 5.4:-20006871 | MS.gene027925:CDS |
| AGCTCTACAAGCTGGAACTC+GGG | 0.505067 | 5.4:-20003126 | MS.gene027925:CDS |
| GCAAGCGGCGGAAGTGGCGG+CGG | 0.507070 | 5.4:-20007046 | MS.gene027925:CDS |
| CATAAATCCATCATCTGTCT+CGG | 0.507108 | 5.4:+20002831 | None:intergenic |
| CAAATCATCAATGTCTGCAC+CGG | 0.507465 | 5.4:+20002759 | None:intergenic |
| TCGTTGGGAATTTGCAAATG+AGG | 0.508434 | 5.4:-20003760 | MS.gene027925:CDS |
| CTGCTCTGTTAGTTGATCCA+GGG | 0.508669 | 5.4:+20002606 | None:intergenic |
| CCTTGAGTCCCTGTTGACAT+TGG | 0.509700 | 5.4:+20003054 | None:intergenic |
| GGAGCAAGCGGCGGAAGTGG+CGG | 0.510221 | 5.4:-20007049 | MS.gene027925:CDS |
| TGAGTAGACTGCACTGAAGA+TGG | 0.510797 | 5.4:+20003081 | None:intergenic |
| TTCGCGTTTAGCATCGGTGT+CGG | 0.511333 | 5.4:+20006995 | None:intergenic |
| TTTATGGATCCGAGTTCACT+TGG | 0.511418 | 5.4:-20002814 | MS.gene027925:CDS |
| TCTGGATATTTCGTCAATGT+TGG | 0.511981 | 5.4:+20002678 | None:intergenic |
| TTGCAAATTCCCAACGATCT+GGG | 0.513798 | 5.4:+20003766 | None:intergenic |
| TTGTTATGCTTGAAGAACTT+CGG | 0.516006 | 5.4:+20006839 | None:intergenic |
| TCTGCAAATGTTATGAAGGA+TGG | 0.520402 | 5.4:-20002976 | MS.gene027925:CDS |
| GGCTTTGGACGGCTTTGGCA+AGG | 0.521460 | 5.4:+20003439 | None:intergenic |
| GGTTCAGCGCCTTCAAGGAA+TGG | 0.521472 | 5.4:-20003490 | MS.gene027925:CDS |
| GGATCAACTAACAGAGCAGA+TGG | 0.526736 | 5.4:-20002602 | MS.gene027925:CDS |
| ATGGCTCCCGAGACAGATGA+TGG | 0.528224 | 5.4:-20002838 | MS.gene027925:CDS |
| GGAAGGTTGACCCAGATCGT+TGG | 0.529784 | 5.4:-20003776 | MS.gene027925:CDS |
| TAGCTCTACAAGCTGGAACT+CGG | 0.530135 | 5.4:-20003127 | MS.gene027925:CDS |
| TGTTTGCAGCTGGCCGTCAG+TGG | 0.533443 | 5.4:+20003515 | None:intergenic |
| CAAGAATTCTCCGAAATGGA+TGG | 0.537798 | 5.4:-20007070 | None:intergenic |
| AACAATTTGTCCATCAGGAG+GGG | 0.543951 | 5.4:+20003299 | None:intergenic |
| ATAAATCCATCATCTGTCTC+GGG | 0.544485 | 5.4:+20002832 | None:intergenic |
| GGACAATAATACTCAGCCCC+TGG | 0.544550 | 5.4:-20002623 | MS.gene027925:CDS |
| TAACAATTTGTCCATCAGGA+GGG | 0.546075 | 5.4:+20003298 | None:intergenic |
| GGGTTCAACCACCCAAATAC+CGG | 0.548137 | 5.4:-20007020 | MS.gene027925:CDS |
| GAGCAAGCTACCCCTCCTGA+TGG | 0.552465 | 5.4:-20003309 | MS.gene027925:CDS |
| GCTACTACTGTCCATTGCAC+TGG | 0.552846 | 5.4:+20003146 | None:intergenic |
| GATAATTACTTGATTGGTGA+TGG | 0.554314 | 5.4:-20003180 | MS.gene027925:CDS |
| TGCTCTGTTAGTTGATCCAG+GGG | 0.555861 | 5.4:+20002607 | None:intergenic |
| CTCAAATTCCAATGTCAACA+GGG | 0.556788 | 5.4:-20003062 | MS.gene027925:CDS |
| CTACTGTCCATTGCACTGGA+TGG | 0.557158 | 5.4:+20003150 | None:intergenic |
| ATGGACAGAGTTCATCAGTA+GGG | 0.560915 | 5.4:-20003647 | MS.gene027925:CDS |
| TTTGCAGATGCTGCAGCTTG+AGG | 0.562895 | 5.4:+20002991 | None:intergenic |
| AAACAGCAAAAGCAATGCTA+AGG | 0.565264 | 5.4:-20003254 | MS.gene027925:CDS |
| CCAATGTCAACAGGGACTCA+AGG | 0.569636 | 5.4:-20003054 | MS.gene027925:CDS |
| TTTCAAACAGGGTTTCAGGA+AGG | 0.570624 | 5.4:-20003793 | MS.gene027925:intron |
| GGTAATGATCCAAGTGAACT+CGG | 0.570835 | 5.4:+20002805 | None:intergenic |
| GATTTGGATTGTCTTTCACC+CGG | 0.577390 | 5.4:-20002778 | MS.gene027925:CDS |
| GGCTTGAGGAAGAGGTTGAG+AGG | 0.577943 | 5.4:-20003599 | MS.gene027925:CDS |
| GGCACAATCTCTGGTACTGA+AGG | 0.579818 | 5.4:+20002895 | None:intergenic |
| TTAACAATTTGTCCATCAGG+AGG | 0.580490 | 5.4:+20003297 | None:intergenic |
| CACCAATCAAGTAATTATCA+GGG | 0.580602 | 5.4:+20003184 | None:intergenic |
| AGCATCTGCAAATGTTATGA+AGG | 0.585668 | 5.4:-20002980 | MS.gene027925:CDS |
| TGTCGGCGCCGGTATTTGGG+TGG | 0.587096 | 5.4:+20007012 | None:intergenic |
| AGGTCCCTAGCGAATTCGGG+TGG | 0.590111 | 5.4:+20006866 | None:intergenic |
| TACTTCACCATCCAGTGCAA+TGG | 0.590271 | 5.4:-20003157 | MS.gene027925:CDS |
| CATGGACAGAGTTCATCAGT+AGG | 0.591063 | 5.4:-20003648 | MS.gene027925:CDS |
| ACAAACTGAGCAAAGAAACC+AGG | 0.596219 | 5.4:+20003417 | None:intergenic |
| GGACCCACCCGAATTCGCTA+GGG | 0.598350 | 5.4:-20006870 | MS.gene027925:CDS |
| TGTTGAGTATGACCATGGGC+AGG | 0.599305 | 5.4:+20003687 | None:intergenic |
| CAACAGGCTCAGCAACCGCA+TGG | 0.606577 | 5.4:-20003666 | MS.gene027925:CDS |
| AAAGAAACCAGGGCTTTGGA+CGG | 0.607667 | 5.4:+20003428 | None:intergenic |
| AGTCGGCAAATTTGGGCTTG+AGG | 0.610170 | 5.4:-20003613 | MS.gene027925:CDS |
| TTCTCATGCAAGAGCTTGTG+AGG | 0.613430 | 5.4:-20003557 | MS.gene027925:CDS |
| ACAGTAGTAGCTCTACAAGC+TGG | 0.613534 | 5.4:-20003134 | MS.gene027925:CDS |
| GTAGGGGCATGTGTAGAAGT+CGG | 0.619207 | 5.4:-20003630 | MS.gene027925:CDS |
| CAGCAGCAACAAACCACTGA+CGG | 0.620232 | 5.4:-20003528 | MS.gene027925:CDS |
| TCCGAAATGGATGGAGCAAG+CGG | 0.623140 | 5.4:-20007061 | None:intergenic |
| AAGCGTCGGCTCAAGCAGGA+TGG | 0.626260 | 5.4:-20003348 | MS.gene027925:CDS |
| AAATCATCAATGTCTGCACC+GGG | 0.630153 | 5.4:+20002760 | None:intergenic |
| TTTGAGCAAAACTTATGACA+TGG | 0.634177 | 5.4:-20006957 | MS.gene027925:CDS |
| GCAGCCAACAGAAAATGGCT+GGG | 0.636582 | 5.4:-20002644 | MS.gene027925:CDS |
| TCTGCAAACTCCAATTCCAG+AGG | 0.640517 | 5.4:-20002710 | MS.gene027925:CDS |
| GATCAACTAACAGAGCAGAT+GGG | 0.641177 | 5.4:-20002601 | MS.gene027925:CDS |
| CTCGGGAGTAACTCTTCAAG+AGG | 0.645660 | 5.4:-20003109 | MS.gene027925:CDS |
| TGACGGCCAGCTGCAAACAA+TGG | 0.646370 | 5.4:-20003511 | MS.gene027925:CDS |
| CCTGTTGTTGAGTATGACCA+TGG | 0.647258 | 5.4:+20003682 | None:intergenic |
| ACATTGACGAAATATCCAGA+GGG | 0.654829 | 5.4:-20002675 | MS.gene027925:CDS |
| TGGACAGAGTTCATCAGTAG+GGG | 0.659673 | 5.4:-20003646 | MS.gene027925:CDS |
| AGTCGAAGAAAACCTGCCCA+TGG | 0.665848 | 5.4:-20003699 | MS.gene027925:CDS |
| CAAACTGAGCAAAGAAACCA+GGG | 0.668272 | 5.4:+20003418 | None:intergenic |
| GGTCCCTAGCGAATTCGGGT+GGG | 0.673393 | 5.4:+20006867 | None:intergenic |
| CTGTTGTTGAGTATGACCAT+GGG | 0.673452 | 5.4:+20003683 | None:intergenic |
| GAAATGGATGGAGCAAGCGG+CGG | 0.687946 | 5.4:-20007058 | MS.gene027925:CDS |
| AACATTGACGAAATATCCAG+AGG | 0.690077 | 5.4:-20002676 | MS.gene027925:CDS |
| GAGCAAAACTTATGACATGG+TGG | 0.697463 | 5.4:-20006954 | MS.gene027925:CDS |
| GTAGACTGCACTGAAGATGG+AGG | 0.697646 | 5.4:+20003084 | None:intergenic |
| ACTGATGAACTCTGTCCATG+CGG | 0.724135 | 5.4:+20003651 | None:intergenic |
| TTATTGAAAGATTCTACACG+CGG | 0.735179 | 5.4:+20003210 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATTATAGTATGTA+AGG | - | chr5.4:20003824-20003843 | MS.gene027925:intron | 10.0% |
| !! | TTACAAAAATTGAAAAATAT+AGG | + | chr5.4:20004032-20004051 | None:intergenic | 10.0% |
| !!! | AGTATTTTTCTTATAATTAG+AGG | - | chr5.4:20004325-20004344 | MS.gene027925:intron | 15.0% |
| !!! | AGTATTTTTCTTATAATTTG+AGG | - | chr5.4:20004968-20004987 | MS.gene027925:intron | 15.0% |
| !!! | TCACAATCATTTTTTTTTTT+GGG | - | chr5.4:20003342-20003361 | MS.gene027925:CDS | 15.0% |
| !! | AAAAAAAATGATTGTGAGAA+TGG | + | chr5.4:20003339-20003358 | None:intergenic | 20.0% |
| !! | AAAAAAATGATTGTGAGAAT+GGG | + | chr5.4:20003338-20003357 | None:intergenic | 20.0% |
| !! | CAATTAAAATGAAAGAGATA+GGG | - | chr5.4:20003601-20003620 | MS.gene027925:CDS | 20.0% |
| !! | CATTGTATATTCAATATCAA+AGG | - | chr5.4:20003799-20003818 | MS.gene027925:intron | 20.0% |
| !! | TCAATTAAAATGAAAGAGAT+AGG | - | chr5.4:20003600-20003619 | MS.gene027925:CDS | 20.0% |
| !! | TTATGGAAAATAAACTTTCT+TGG | - | chr5.4:20004574-20004593 | MS.gene027925:intron | 20.0% |
| !! | TTCCTATAAAATTTCAAACA+GGG | - | chr5.4:20005821-20005840 | MS.gene027925:intron | 20.0% |
| !! | TTTCCTATAAAATTTCAAAC+AGG | - | chr5.4:20005820-20005839 | MS.gene027925:intron | 20.0% |
| !! | TTTGTTAAGCAATTCTATTT+GGG | - | chr5.4:20006885-20006904 | MS.gene027925:CDS | 20.0% |
| !!! | AAAACTTTAGCTTTTTGTTA+TGG | - | chr5.4:20005330-20005349 | MS.gene027925:intron | 20.0% |
| !!! | AAAGTGTTTAATTTACTTTG+TGG | - | chr5.4:20002980-20002999 | MS.gene027925:CDS | 20.0% |
| !!! | AAGTGTTTAATTTACTTTGT+GGG | - | chr5.4:20002981-20003000 | MS.gene027925:CDS | 20.0% |
| !!! | ACTTATTATCCTCTAAAAAA+AGG | + | chr5.4:20004408-20004427 | None:intergenic | 20.0% |
| !!! | ATCTCTTTCATTTTAATTGA+AGG | + | chr5.4:20003600-20003619 | None:intergenic | 20.0% |
| !!! | ATTATTATGAAGAGGATTTT+AGG | - | chr5.4:20003861-20003880 | MS.gene027925:intron | 20.0% |
| !!! | ATTTGTTAAGCAATTCTATT+TGG | - | chr5.4:20006884-20006903 | MS.gene027925:CDS | 20.0% |
| !!! | ATTTTATAGGAAAAATAGTC+AGG | + | chr5.4:20005813-20005832 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTGATTTGAGTTT+TGG | - | chr5.4:20002886-20002905 | MS.gene027925:CDS | 20.0% |
| !!! | CACAATCATTTTTTTTTTTG+GGG | - | chr5.4:20003343-20003362 | MS.gene027925:CDS | 20.0% |
| !!! | CTCACAATCATTTTTTTTTT+TGG | - | chr5.4:20003341-20003360 | MS.gene027925:CDS | 20.0% |
| !!! | CTTATTATCCTCTAAAAAAA+GGG | + | chr5.4:20004407-20004426 | None:intergenic | 20.0% |
| !!! | TAATTAGTATGTTTTTATGC+AGG | - | chr5.4:20004361-20004380 | MS.gene027925:intron | 20.0% |
| !!! | TGATGTTTTTGTTAATTTGT+GGG | - | chr5.4:20003022-20003041 | MS.gene027925:CDS | 20.0% |
| !!! | TTATTATGAAGAGGATTTTA+GGG | - | chr5.4:20003862-20003881 | MS.gene027925:intron | 20.0% |
| !!! | TTGATGTTTTTGTTAATTTG+TGG | - | chr5.4:20003021-20003040 | MS.gene027925:CDS | 20.0% |
| !!! | TTTTGTAAGACAAATGATAA+AGG | - | chr5.4:20004044-20004063 | MS.gene027925:intron | 20.0% |
| ! | AAAAAGAGAGAAGACAATTA+AGG | + | chr5.4:20005712-20005731 | None:intergenic | 25.0% |
| ! | AATGTAGTTTATGATACGAT+AGG | - | chr5.4:20004145-20004164 | MS.gene027925:intron | 25.0% |
| ! | AGTAAATTTCCTTACTTTCA+CGG | + | chr5.4:20003573-20003592 | None:intergenic | 25.0% |
| ! | AGTAGATTAACAAAATCAAC+TGG | + | chr5.4:20004460-20004479 | None:intergenic | 25.0% |
| ! | ATGACACTAAATGATAAAGA+GGG | + | chr5.4:20003386-20003405 | None:intergenic | 25.0% |
| ! | ATTGATTGTATCAAAACACT+AGG | - | chr5.4:20005134-20005153 | MS.gene027925:intron | 25.0% |
| ! | CAGTTAATTATAACCCATAA+AGG | + | chr5.4:20004824-20004843 | None:intergenic | 25.0% |
| ! | CTTTATTGTCAACTTAGTTA+AGG | + | chr5.4:20005454-20005473 | None:intergenic | 25.0% |
| ! | GATATTGAATATACAATGCA+TGG | + | chr5.4:20003797-20003816 | None:intergenic | 25.0% |
| ! | GTAGATTAACAAAATCAACT+GGG | + | chr5.4:20004459-20004478 | None:intergenic | 25.0% |
| ! | GTTAAGGTTCAAAAGATAAA+TGG | + | chr5.4:20004666-20004685 | None:intergenic | 25.0% |
| ! | GTTAATCAGTTACTTGATTA+TGG | - | chr5.4:20003762-20003781 | MS.gene027925:CDS | 25.0% |
| ! | GTTTATTGTCAACTTAGTTA+AGG | + | chr5.4:20004682-20004701 | None:intergenic | 25.0% |
| ! | TAAAATATCAGCACTCAATT+TGG | - | chr5.4:20004779-20004798 | MS.gene027925:intron | 25.0% |
| ! | TATACCTGAAGACAATTATA+TGG | - | chr5.4:20006768-20006787 | MS.gene027925:intron | 25.0% |
| ! | TATTTAACAATTTGTCCATC+AGG | + | chr5.4:20006334-20006353 | None:intergenic | 25.0% |
| ! | TCCTATTATCCTCTTAAAAA+AGG | + | chr5.4:20005076-20005095 | None:intergenic | 25.0% |
| ! | TTTGATCTATGATTATACTG+TGG | - | chr5.4:20003049-20003068 | MS.gene027925:CDS | 25.0% |
| !! | AGTGTTTAATTTACTTTGTG+GGG | - | chr5.4:20002982-20003001 | MS.gene027925:CDS | 25.0% |
| !! | ATGTTTTATCAAACCCATAA+AGG | + | chr5.4:20005596-20005615 | None:intergenic | 25.0% |
| !! | GATTTTTGAACTGTTTGTTT+TGG | - | chr5.4:20003108-20003127 | MS.gene027925:CDS | 25.0% |
| !! | GGTATATCAAGAATACTTTT+AGG | + | chr5.4:20006754-20006773 | None:intergenic | 25.0% |
| !! | TCATAAGTTTTGCTCAAAAA+CGG | + | chr5.4:20002666-20002685 | None:intergenic | 25.0% |
| !!! | AACCCTGTTTGAAATTTTAT+AGG | + | chr5.4:20005826-20005845 | None:intergenic | 25.0% |
| !!! | ACAACTTTAGCTTTTAGTTA+TGG | - | chr5.4:20004557-20004576 | MS.gene027925:intron | 25.0% |
| !!! | TCCTTTTTTAAGAGGATAAT+AGG | - | chr5.4:20005072-20005091 | MS.gene027925:intron | 25.0% |
| !!! | TCGAAAGTTGTGTTTTTTTA+TGG | - | chr5.4:20005771-20005790 | MS.gene027925:intron | 25.0% |
| !!! | TGTTTTGGTGAAATATAATG+AGG | - | chr5.4:20003123-20003142 | MS.gene027925:CDS | 25.0% |
| AAAATTTCAAACAGGGTTTC+AGG | - | chr5.4:20005828-20005847 | MS.gene027925:intron | 30.0% | |
| AACAACAAAATGACAGCAAT+AGG | - | chr5.4:20006233-20006252 | MS.gene027925:intron | 30.0% | |
| AACCCTGATAATTACTTGAT+TGG | - | chr5.4:20006439-20006458 | MS.gene027925:intron | 30.0% | |
| AATTAAGCTAGGTGTATCAA+TGG | + | chr5.4:20004618-20004637 | None:intergenic | 30.0% | |
| AGTTGACAATAAAGAGATAG+TGG | - | chr5.4:20005460-20005479 | MS.gene027925:intron | 30.0% | |
| ATAAATTCACAGCAAGTAAG+TGG | + | chr5.4:20005110-20005129 | None:intergenic | 30.0% | |
| ATACCAGTATGTATTCAACT+TGG | - | chr5.4:20004102-20004121 | MS.gene027925:intron | 30.0% | |
| ATCTGAATTGTGGTTATAAG+GGG | - | chr5.4:20003462-20003481 | MS.gene027925:CDS | 30.0% | |
| ATGCCAATAACAAAATCAAC+TGG | + | chr5.4:20005198-20005217 | None:intergenic | 30.0% | |
| ATTAAGGATGTGCAACAATA+TGG | + | chr5.4:20005696-20005715 | None:intergenic | 30.0% | |
| CAATAAGCTATGTGTATCAA+TGG | + | chr5.4:20005391-20005410 | None:intergenic | 30.0% | |
| CACCAATCAAGTAATTATCA+GGG | + | chr5.4:20006444-20006463 | None:intergenic | 30.0% | |
| CATGACACTAAATGATAAAG+AGG | + | chr5.4:20003387-20003406 | None:intergenic | 30.0% | |
| CGTAGTGAATTATTATGAAG+AGG | - | chr5.4:20003853-20003872 | MS.gene027925:intron | 30.0% | |
| CTCTTTATCATTTAGTGTCA+TGG | - | chr5.4:20003385-20003404 | MS.gene027925:CDS | 30.0% | |
| GAAAGACAATCCAAATCAAT+GGG | + | chr5.4:20006844-20006863 | None:intergenic | 30.0% | |
| GATAATTACTTGATTGGTGA+TGG | - | chr5.4:20006445-20006464 | MS.gene027925:intron | 30.0% | |
| GATCTGAATTGTGGTTATAA+GGG | - | chr5.4:20003461-20003480 | MS.gene027925:CDS | 30.0% | |
| GCTTAAAAGTAAGAATGCAA+CGG | + | chr5.4:20004304-20004323 | None:intergenic | 30.0% | |
| GCTTAAAAGTAAGAATGCAA+TGG | + | chr5.4:20004304-20004323 | None:intergenic | 30.0% | |
| GCTTTATAGTTAACTGCTTT+AGG | - | chr5.4:20004196-20004215 | MS.gene027925:intron | 30.0% | |
| GGATGTGTATATAACAACAT+AGG | - | chr5.4:20004166-20004185 | MS.gene027925:intron | 30.0% | |
| GTTTCCTTCTTTCAAAAGAA+TGG | - | chr5.4:20003641-20003660 | MS.gene027925:CDS | 30.0% | |
| TAAAATGAAAGAGATAGGGT+GGG | - | chr5.4:20003605-20003624 | MS.gene027925:CDS | 30.0% | |
| TAGTATTACACACTCAATTC+TGG | + | chr5.4:20005652-20005671 | None:intergenic | 30.0% | |
| TATAGGAAAAATAGTCAGGA+AGG | + | chr5.4:20005809-20005828 | None:intergenic | 30.0% | |
| TCACCAATCAAGTAATTATC+AGG | + | chr5.4:20006445-20006464 | None:intergenic | 30.0% | |
| TGAAAGACAATCCAAATCAA+TGG | + | chr5.4:20006845-20006864 | None:intergenic | 30.0% | |
| TGATCTGAATTGTGGTTATA+AGG | - | chr5.4:20003460-20003479 | MS.gene027925:CDS | 30.0% | |
| TGCCAATAACAAAATCAACT+GGG | + | chr5.4:20005197-20005216 | None:intergenic | 30.0% | |
| TTAAAATGAAAGAGATAGGG+TGG | - | chr5.4:20003604-20003623 | MS.gene027925:CDS | 30.0% | |
| TTATGAACTTTGCAATGATG+TGG | - | chr5.4:20004225-20004244 | MS.gene027925:intron | 30.0% | |
| TTATTGAAAGATTCTACACG+CGG | + | chr5.4:20006418-20006437 | None:intergenic | 30.0% | |
| TTGTTATGCTTGAAGAACTT+CGG | + | chr5.4:20002789-20002808 | None:intergenic | 30.0% | |
| TTTGAGCAAAACTTATGACA+TGG | - | chr5.4:20002668-20002687 | MS.gene027925:CDS | 30.0% | |
| ! | AAACATGTCACTTACATTAC+AGG | + | chr5.4:20003925-20003944 | None:intergenic | 30.0% |
| ! | AACATGTCACTTACATTACA+GGG | + | chr5.4:20003924-20003943 | None:intergenic | 30.0% |
| ! | AAGTACTGCTATCAGTATAA+TGG | - | chr5.4:20003995-20004014 | MS.gene027925:intron | 30.0% |
| ! | CTTCTTTCTCACTCTTTTAA+CGG | - | chr5.4:20002856-20002875 | MS.gene027925:CDS | 30.0% |
| ! | TTATACTGTGGATGTTGATT+TGG | - | chr5.4:20003061-20003080 | MS.gene027925:CDS | 30.0% |
| ! | TTTCTGGACATAAGACTTTT+GGG | - | chr5.4:20005510-20005529 | MS.gene027925:intron | 30.0% |
| ! | TTTGTGGACATAAGACTTTT+GGG | - | chr5.4:20004738-20004757 | MS.gene027925:intron | 30.0% |
| !! | AGAATTATTTGCTATGAAGC+TGG | - | chr5.4:20003892-20003911 | MS.gene027925:intron | 30.0% |
| !! | CTATCCATTCTTTTGAAAGA+AGG | + | chr5.4:20003648-20003667 | None:intergenic | 30.0% |
| !! | GGATGTTGATTTGGTTTAAT+GGG | - | chr5.4:20003070-20003089 | MS.gene027925:CDS | 30.0% |
| !! | TGGATGTTGATTTGGTTTAA+TGG | - | chr5.4:20003069-20003088 | MS.gene027925:CDS | 30.0% |
| !! | TTTGCTGTTTCATTCATCAT+AGG | + | chr5.4:20006361-20006380 | None:intergenic | 30.0% |
| !! | TTTGTTATTGGCATTCGTTA+AGG | - | chr5.4:20005204-20005223 | MS.gene027925:intron | 30.0% |
| AAACAGCAAAAGCAATGCTA+AGG | - | chr5.4:20006371-20006390 | MS.gene027925:intron | 35.0% | |
| AACATTGACGAAATATCCAG+AGG | - | chr5.4:20006949-20006968 | MS.gene027925:CDS | 35.0% | |
| AACTGATCAGTTACTGCTTT+AGG | - | chr5.4:20004839-20004858 | MS.gene027925:intron | 35.0% | |
| ACATTGACGAAATATCCAGA+GGG | - | chr5.4:20006950-20006969 | MS.gene027925:CDS | 35.0% | |
| ACTTTCTTGGATTCAACTTC+TGG | - | chr5.4:20004587-20004606 | MS.gene027925:intron | 35.0% | |
| AGCATCTGCAAATGTTATGA+AGG | - | chr5.4:20006645-20006664 | MS.gene027925:intron | 35.0% | |
| ATAAATCCATCATCTGTCTC+GGG | + | chr5.4:20006796-20006815 | None:intergenic | 35.0% | |
| ATAACATCTGCTTGAGAAGT+CGG | + | chr5.4:20006697-20006716 | None:intergenic | 35.0% | |
| ATATCAGCACTCAATTTGGT+TGG | - | chr5.4:20004783-20004802 | MS.gene027925:intron | 35.0% | |
| ATGTGCAACAATATGGCTAA+AGG | + | chr5.4:20005689-20005708 | None:intergenic | 35.0% | |
| ATTCAATACGCCAAAATGGT+GGG | - | chr5.4:20005001-20005020 | MS.gene027925:intron | 35.0% | |
| CAACAACAGTTTCGTTGTTT+GGG | - | chr5.4:20002734-20002753 | MS.gene027925:CDS | 35.0% | |
| CAGCTCATATCAATTAAGCT+AGG | + | chr5.4:20004629-20004648 | None:intergenic | 35.0% | |
| CATAAATCCATCATCTGTCT+CGG | + | chr5.4:20006797-20006816 | None:intergenic | 35.0% | |
| GACTGGTATACATCCTTTAT+GGG | - | chr5.4:20004808-20004827 | MS.gene027925:intron | 35.0% | |
| GCTAAGGAAGATCATGAAAT+GGG | - | chr5.4:20006387-20006406 | MS.gene027925:intron | 35.0% | |
| GTATGTACTTTGCAATGATG+TGG | - | chr5.4:20004868-20004887 | MS.gene027925:intron | 35.0% | |
| TAACAATTTGTCCATCAGGA+GGG | + | chr5.4:20006330-20006349 | None:intergenic | 35.0% | |
| TAGTGATGTGATCTGAATTG+TGG | - | chr5.4:20003452-20003471 | MS.gene027925:CDS | 35.0% | |
| TATAATGAGGAGTGGAAAGA+TGG | - | chr5.4:20003136-20003155 | MS.gene027925:CDS | 35.0% | |
| TATCAGCACTCAATTTGGTT+GGG | - | chr5.4:20004784-20004803 | MS.gene027925:intron | 35.0% | |
| TCTGAATTGTGGTTATAAGG+GGG | - | chr5.4:20003463-20003482 | MS.gene027925:CDS | 35.0% | |
| TCTGCAAATGTTATGAAGGA+TGG | - | chr5.4:20006649-20006668 | MS.gene027925:intron | 35.0% | |
| TCTGGATATTTCGTCAATGT+TGG | + | chr5.4:20006950-20006969 | None:intergenic | 35.0% | |
| TGACAAAGAAAGCTATTCTC+AGG | - | chr5.4:20003740-20003759 | MS.gene027925:CDS | 35.0% | |
| TGACTGGTATACATCCTTTA+TGG | - | chr5.4:20004807-20004826 | MS.gene027925:intron | 35.0% | |
| TGAGGTACAGATAGAATTTC+AGG | + | chr5.4:20006619-20006638 | None:intergenic | 35.0% | |
| TGCTAAGGAAGATCATGAAA+TGG | - | chr5.4:20006386-20006405 | MS.gene027925:intron | 35.0% | |
| TGGTGAAATATAATGAGGAG+TGG | - | chr5.4:20003128-20003147 | MS.gene027925:CDS | 35.0% | |
| TGTTCAGGAAACTAGTAGAT+TGG | + | chr5.4:20005233-20005252 | None:intergenic | 35.0% | |
| TTAACAATTTGTCCATCAGG+AGG | + | chr5.4:20006331-20006350 | None:intergenic | 35.0% | |
| ! | ATACTTTTAGGCACAATCTC+TGG | + | chr5.4:20006742-20006761 | None:intergenic | 35.0% |
| ! | ATGGTTTTCTTCGAGTGAAA+TGG | - | chr5.4:20003404-20003423 | MS.gene027925:CDS | 35.0% |
| ! | GTTTGTGGACATAAGACTTT+TGG | - | chr5.4:20004737-20004756 | MS.gene027925:intron | 35.0% |
| ! | TAAGTTTTGCTCAAAAACGG+TGG | + | chr5.4:20002663-20002682 | None:intergenic | 35.0% |
| ! | TCACCAAGTTGAATACATAC+TGG | + | chr5.4:20004108-20004127 | None:intergenic | 35.0% |
| ! | TGGATCATTACCCATTGATT+TGG | - | chr5.4:20006831-20006850 | MS.gene027925:CDS | 35.0% |
| !! | AGCCCAGTTGATTTTGTTAT+TGG | - | chr5.4:20005192-20005211 | MS.gene027925:intron | 35.0% |
| !! | ATTTGCTATGAAGCTGGTAT+TGG | - | chr5.4:20003898-20003917 | MS.gene027925:intron | 35.0% |
| !! | GCATGTTTTTATGTAGCATG+AGG | - | chr5.4:20004921-20004940 | MS.gene027925:intron | 35.0% |
| !! | GTTTCTGGACATAAGACTTT+TGG | - | chr5.4:20005509-20005528 | MS.gene027925:intron | 35.0% |
| !! | TGATTTGGTGTGGTTGAATT+AGG | - | chr5.4:20003513-20003532 | MS.gene027925:CDS | 35.0% |
| !!! | AATTTCAGGTTTTTCTGCTG+AGG | + | chr5.4:20006605-20006624 | None:intergenic | 35.0% |
| !!! | ATTTCAGGTTTTTCTGCTGA+GGG | + | chr5.4:20006604-20006623 | None:intergenic | 35.0% |
| !!! | TGAGTGCTGATATTTTACTC+AGG | + | chr5.4:20004776-20004795 | None:intergenic | 35.0% |
| AAATCATCAATGTCTGCACC+GGG | + | chr5.4:20006868-20006887 | None:intergenic | 40.0% | |
| AACAATTTGTCCATCAGGAG+GGG | + | chr5.4:20006329-20006348 | None:intergenic | 40.0% | |
| AATTCTTCCCTCTTCAAACC+TGG | - | chr5.4:20005626-20005645 | MS.gene027925:intron | 40.0% | |
| ACAAACTGAGCAAAGAAACC+AGG | + | chr5.4:20006211-20006230 | None:intergenic | 40.0% | |
| ACTAATTTCCTGAACACGCT+TGG | - | chr5.4:20004477-20004496 | MS.gene027925:intron | 40.0% | |
| AGAGATAGGGTGGGAATTAT+TGG | - | chr5.4:20003614-20003633 | MS.gene027925:CDS | 40.0% | |
| ATGGACAGAGTTCATCAGTA+GGG | - | chr5.4:20005978-20005997 | MS.gene027925:intron | 40.0% | |
| CAAACTGAGCAAAGAAACCA+GGG | + | chr5.4:20006210-20006229 | None:intergenic | 40.0% | |
| CAAATCATCAATGTCTGCAC+CGG | + | chr5.4:20006869-20006888 | None:intergenic | 40.0% | |
| CAACAGATGCGATAGTTTCA+TGG | - | chr5.4:20002703-20002722 | MS.gene027925:CDS | 40.0% | |
| CATCTAGTTGCTGACAATGT+AGG | + | chr5.4:20003702-20003721 | None:intergenic | 40.0% | |
| CATTCAATACGCCAAAATGG+TGG | - | chr5.4:20005000-20005019 | MS.gene027925:intron | 40.0% | |
| CCAAACAACGAAACTGTTGT+TGG | + | chr5.4:20002736-20002755 | None:intergenic | 40.0% | |
| CCAACAACAGTTTCGTTGTT+TGG | - | chr5.4:20002733-20002752 | MS.gene027925:CDS | 40.0% | |
| CGTTGGGAATTTGCAAATGA+GGG | - | chr5.4:20005866-20005885 | MS.gene027925:intron | 40.0% | |
| CTAATTTCCTGAACACGCTT+GGG | - | chr5.4:20004478-20004497 | MS.gene027925:intron | 40.0% | |
| CTACATTGTCAGCAACTAGA+TGG | - | chr5.4:20003700-20003719 | MS.gene027925:CDS | 40.0% | |
| CTAGTTTCCTGAACACTCTT+GGG | - | chr5.4:20005238-20005257 | MS.gene027925:intron | 40.0% | |
| CTGCATTCAATACGCCAAAA+TGG | - | chr5.4:20004997-20005016 | MS.gene027925:intron | 40.0% | |
| CTGTTGTTGAGTATGACCAT+GGG | + | chr5.4:20005945-20005964 | None:intergenic | 40.0% | |
| GAAACTATCGCATCTGTTGA+AGG | + | chr5.4:20002702-20002721 | None:intergenic | 40.0% | |
| GAGCAAAACTTATGACATGG+TGG | - | chr5.4:20002671-20002690 | MS.gene027925:CDS | 40.0% | |
| GATCAACTAACAGAGCAGAT+GGG | - | chr5.4:20007024-20007043 | MS.gene027925:CDS | 40.0% | |
| GATTTGGATTGTCTTTCACC+CGG | - | chr5.4:20006847-20006866 | MS.gene027925:CDS | 40.0% | |
| GCATGTTCTTATGTAGCATG+AGG | - | chr5.4:20004278-20004297 | MS.gene027925:intron | 40.0% | |
| GGAGCCATATAATTGTCTTC+AGG | + | chr5.4:20006775-20006794 | None:intergenic | 40.0% | |
| GGTAATGATCCAAGTGAACT+CGG | + | chr5.4:20006823-20006842 | None:intergenic | 40.0% | |
| GTGTAGAAGTCGGCAAATTT+GGG | - | chr5.4:20006005-20006024 | MS.gene027925:intron | 40.0% | |
| GTTAAACTGATCTGCAGAGA+AGG | + | chr5.4:20004537-20004556 | None:intergenic | 40.0% | |
| TAACATCTGCTTGAGAAGTC+GGG | + | chr5.4:20006696-20006715 | None:intergenic | 40.0% | |
| TAGTTGCTGACAATGTAGGA+GGG | + | chr5.4:20003698-20003717 | None:intergenic | 40.0% | |
| TCAACTGAACCGTGAAAGTA+AGG | - | chr5.4:20003561-20003580 | MS.gene027925:CDS | 40.0% | |
| TCGTTGGGAATTTGCAAATG+AGG | - | chr5.4:20005865-20005884 | MS.gene027925:intron | 40.0% | |
| TGCAATGATGTGGAACTGAT+CGG | - | chr5.4:20004235-20004254 | MS.gene027925:intron | 40.0% | |
| TGTGTAGAAGTCGGCAAATT+TGG | - | chr5.4:20006004-20006023 | MS.gene027925:intron | 40.0% | |
| TTACTTTCACGGTTCAGTTG+AGG | + | chr5.4:20003562-20003581 | None:intergenic | 40.0% | |
| TTCTTCGAGTGAAATGGTGA+CGG | - | chr5.4:20003410-20003429 | MS.gene027925:CDS | 40.0% | |
| TTGCAAATTCCCAACGATCT+GGG | + | chr5.4:20005862-20005881 | None:intergenic | 40.0% | |
| TTTATGGATCCGAGTTCACT+TGG | - | chr5.4:20006811-20006830 | MS.gene027925:intron | 40.0% | |
| TTTCAAACAGGGTTTCAGGA+AGG | - | chr5.4:20005832-20005851 | MS.gene027925:intron | 40.0% | |
| TTTGCAAATTCCCAACGATC+TGG | + | chr5.4:20005863-20005882 | None:intergenic | 40.0% | |
| ! | AATCAACTGGGCTTTTCACA+AGG | + | chr5.4:20005185-20005204 | None:intergenic | 40.0% |
| ! | ACTAGTTTCCTGAACACTCT+TGG | - | chr5.4:20005237-20005256 | MS.gene027925:intron | 40.0% |
| ! | CTGAAGTCAACAAAAAGCGT+CGG | - | chr5.4:20006263-20006282 | MS.gene027925:intron | 40.0% |
| ! | GTGTTGCTCAATTTATCCTC+AGG | - | chr5.4:20004710-20004729 | MS.gene027925:intron | 40.0% |
| ! | TCCAATTCCAGAGGATTTTG+AGG | - | chr5.4:20006924-20006943 | MS.gene027925:CDS | 40.0% |
| ! | TCTGGTACTGAAGGTATATC+AGG | + | chr5.4:20006724-20006743 | None:intergenic | 40.0% |
| ! | TGCAAATGAGGGCTTTTTGA+GGG | - | chr5.4:20005877-20005896 | MS.gene027925:intron | 40.0% |
| ! | TTGCAAATGAGGGCTTTTTG+AGG | - | chr5.4:20005876-20005895 | MS.gene027925:intron | 40.0% |
| !! | CAGTTACTGCTTTAGGAAGA+TGG | - | chr5.4:20004846-20004865 | MS.gene027925:intron | 40.0% |
| !! | CGAGACAGATGATGGATTTA+TGG | - | chr5.4:20006795-20006814 | MS.gene027925:intron | 40.0% |
| !! | TGGACATAAGACTTTTGGGA+TGG | - | chr5.4:20004742-20004761 | MS.gene027925:intron | 40.0% |
| !!! | TTTCAGGTTTTTCTGCTGAG+GGG | + | chr5.4:20006603-20006622 | None:intergenic | 40.0% |
| AAAAGGTCCCTAGCGAATTC+GGG | + | chr5.4:20002765-20002784 | None:intergenic | 45.0% | |
| AATTCTGGCCAGGTTTGAAG+AGG | + | chr5.4:20005637-20005656 | None:intergenic | 45.0% | |
| ACACTGAACAAGACAAGGAC+AGG | + | chr5.4:20003296-20003315 | None:intergenic | 45.0% | |
| ACGCCTTCCATCAGAAATGT+CGG | + | chr5.4:20003182-20003201 | None:intergenic | 45.0% | |
| ACTCAATTTGGTTGGGTGAC+TGG | - | chr5.4:20004791-20004810 | MS.gene027925:intron | 45.0% | |
| ACTGATGAACTCTGTCCATG+CGG | + | chr5.4:20005977-20005996 | None:intergenic | 45.0% | |
| ATTCTGGCCAGGTTTGAAGA+GGG | + | chr5.4:20005636-20005655 | None:intergenic | 45.0% | |
| CAAAAGGTCCCTAGCGAATT+CGG | + | chr5.4:20002766-20002785 | None:intergenic | 45.0% | |
| CAAATTTGGGCTTGAGGAAG+AGG | - | chr5.4:20006018-20006037 | MS.gene027925:intron | 45.0% | |
| CACTGAACAAGACAAGGACA+GGG | + | chr5.4:20003295-20003314 | None:intergenic | 45.0% | |
| CACTGACACTGAACAAGACA+AGG | + | chr5.4:20003301-20003320 | None:intergenic | 45.0% | |
| CATGGACAGAGTTCATCAGT+AGG | - | chr5.4:20005977-20005996 | MS.gene027925:intron | 45.0% | |
| CCATGGTCATACTCAACAAC+AGG | - | chr5.4:20005943-20005962 | MS.gene027925:intron | 45.0% | |
| CCTCTTAAAAAAGGACAGCC+CGG | + | chr5.4:20005067-20005086 | None:intergenic | 45.0% | |
| CCTGTTGTTGAGTATGACCA+TGG | + | chr5.4:20005946-20005965 | None:intergenic | 45.0% | |
| CGAAATATCCAGAGGGAATG+AGG | - | chr5.4:20006957-20006976 | MS.gene027925:CDS | 45.0% | |
| CTAGTTGCTGACAATGTAGG+AGG | + | chr5.4:20003699-20003718 | None:intergenic | 45.0% | |
| CTGCTCTGTTAGTTGATCCA+GGG | + | chr5.4:20007022-20007041 | None:intergenic | 45.0% | |
| GCTTGAAGAACTTCGGCAAA+AGG | + | chr5.4:20002782-20002801 | None:intergenic | 45.0% | |
| GGATCAACTAACAGAGCAGA+TGG | - | chr5.4:20007023-20007042 | MS.gene027925:CDS | 45.0% | |
| GTTCAGTGTCAGTGCTTCAT+AGG | - | chr5.4:20003307-20003326 | MS.gene027925:CDS | 45.0% | |
| TACTTCACCATCCAGTGCAA+TGG | - | chr5.4:20006468-20006487 | MS.gene027925:intron | 45.0% | |
| TCTGCAAACTCCAATTCCAG+AGG | - | chr5.4:20006915-20006934 | MS.gene027925:CDS | 45.0% | |
| TCTGCTCTGTTAGTTGATCC+AGG | + | chr5.4:20007023-20007042 | None:intergenic | 45.0% | |
| TGAGTAGACTGCACTGAAGA+TGG | + | chr5.4:20006547-20006566 | None:intergenic | 45.0% | |
| TGCTCTGTTAGTTGATCCAG+GGG | + | chr5.4:20007021-20007040 | None:intergenic | 45.0% | |
| TGGACAGAGTTCATCAGTAG+GGG | - | chr5.4:20005979-20005998 | MS.gene027925:intron | 45.0% | |
| TTACACACTCAATTCTGGCC+AGG | + | chr5.4:20005647-20005666 | None:intergenic | 45.0% | |
| TTATCCTCAGGCTCAGTTTC+TGG | - | chr5.4:20005494-20005513 | MS.gene027925:intron | 45.0% | |
| TTATCCTCAGGCTCAGTTTG+TGG | - | chr5.4:20004722-20004741 | MS.gene027925:intron | 45.0% | |
| TTCTCATGCAAGAGCTTGTG+AGG | - | chr5.4:20006068-20006087 | MS.gene027925:intron | 45.0% | |
| ! | ACAGTAGTAGCTCTACAAGC+TGG | - | chr5.4:20006491-20006510 | MS.gene027925:intron | 45.0% |
| ! | ATGTTGGCCTCAAAATCCTC+TGG | + | chr5.4:20006934-20006953 | None:intergenic | 45.0% |
| ! | CAACTGGGCTTTGATTCACA+AGG | + | chr5.4:20004444-20004463 | None:intergenic | 45.0% |
| ! | CCTCTAAAAAAAGGGTAGCC+CGG | + | chr5.4:20004399-20004418 | None:intergenic | 45.0% |
| ! | GTTTTGCTCAAAAACGGTGG+CGG | + | chr5.4:20002660-20002679 | None:intergenic | 45.0% |
| ! | TAGCTCTACAAGCTGGAACT+CGG | - | chr5.4:20006498-20006517 | MS.gene027925:intron | 45.0% |
| !! | AAAGAAACCAGGGCTTTGGA+CGG | + | chr5.4:20006200-20006219 | None:intergenic | 45.0% |
| !! | GCAAATGAGGGCTTTTTGAG+GGG | - | chr5.4:20005878-20005897 | MS.gene027925:intron | 45.0% |
| !! | GCCTCAAAATCCTCTGGAAT+TGG | + | chr5.4:20006928-20006947 | None:intergenic | 45.0% |
| !! | TTGTCCCAGCCATTTTCTGT+TGG | + | chr5.4:20006988-20007007 | None:intergenic | 45.0% |
| ACAATGGTTCAGCGCCTTCA+AGG | - | chr5.4:20006130-20006149 | MS.gene027925:intron | 50.0% | |
| ACTAAAGCTCCTGCAAACGC+AGG | + | chr5.4:20005041-20005060 | None:intergenic | 50.0% | |
| AGCTCTACAAGCTGGAACTC+GGG | - | chr5.4:20006499-20006518 | MS.gene027925:intron | 50.0% | |
| AGGACAGGGTACATCAACGA+TGG | + | chr5.4:20003281-20003300 | None:intergenic | 50.0% | |
| AGTCGAAGAAAACCTGCCCA+TGG | - | chr5.4:20005926-20005945 | MS.gene027925:intron | 50.0% | |
| AGTCGGCAAATTTGGGCTTG+AGG | - | chr5.4:20006012-20006031 | MS.gene027925:intron | 50.0% | |
| ATGTCCACAAACTGAGCCTG+AGG | + | chr5.4:20004729-20004748 | None:intergenic | 50.0% | |
| ATGTCCAGAAACTGAGCCTG+AGG | + | chr5.4:20005501-20005520 | None:intergenic | 50.0% | |
| CAAATCAGCGTGTACGGCAA+AGG | + | chr5.4:20003500-20003519 | None:intergenic | 50.0% | |
| CAGCAGCAACAAACCACTGA+CGG | - | chr5.4:20006097-20006116 | MS.gene027925:intron | 50.0% | |
| CCAATGTCAACAGGGACTCA+AGG | - | chr5.4:20006571-20006590 | MS.gene027925:intron | 50.0% | |
| CCACACCAAATCAGCGTGTA+CGG | + | chr5.4:20003506-20003525 | None:intergenic | 50.0% | |
| CCTTCCATCAGAAATGTCGG+CGG | + | chr5.4:20003179-20003198 | None:intergenic | 50.0% | |
| CCTTGAGTCCCTGTTGACAT+TGG | + | chr5.4:20006574-20006593 | None:intergenic | 50.0% | |
| CTACTGTCCATTGCACTGGA+TGG | + | chr5.4:20006478-20006497 | None:intergenic | 50.0% | |
| CTCGGGAGTAACTCTTCAAG+AGG | - | chr5.4:20006516-20006535 | MS.gene027925:intron | 50.0% | |
| GAAGGTTGACCCAGATCGTT+GGG | - | chr5.4:20005850-20005869 | MS.gene027925:intron | 50.0% | |
| GAGCAAAGAAACCAGGGCTT+TGG | + | chr5.4:20006204-20006223 | None:intergenic | 50.0% | |
| GAGGTGCAGCCAACAGAAAA+TGG | - | chr5.4:20006976-20006995 | MS.gene027925:CDS | 50.0% | |
| GCAACTAGATGGAGCAGAAG+AGG | - | chr5.4:20003711-20003730 | MS.gene027925:CDS | 50.0% | |
| GCAGCCAACAGAAAATGGCT+GGG | - | chr5.4:20006981-20007000 | MS.gene027925:CDS | 50.0% | |
| GCTACTACTGTCCATTGCAC+TGG | + | chr5.4:20006482-20006501 | None:intergenic | 50.0% | |
| GCTGAACCATTGTTTGCAGC+TGG | + | chr5.4:20006123-20006142 | None:intergenic | 50.0% | |
| GGACAATAATACTCAGCCCC+TGG | - | chr5.4:20007002-20007021 | MS.gene027925:CDS | 50.0% | |
| GGGTTCAACCACCCAAATAC+CGG | - | chr5.4:20002605-20002624 | MS.gene027925:CDS | 50.0% | |
| GTAGACTGCACTGAAGATGG+AGG | + | chr5.4:20006544-20006563 | None:intergenic | 50.0% | |
| GTCGTTGCTCCATTCCTTGA+AGG | + | chr5.4:20006147-20006166 | None:intergenic | 50.0% | |
| TGCAGCCAACAGAAAATGGC+TGG | - | chr5.4:20006980-20006999 | MS.gene027925:CDS | 50.0% | |
| TGTGGTTATAAGGGGGAGAC+AGG | - | chr5.4:20003470-20003489 | MS.gene027925:CDS | 50.0% | |
| TGTTGAGTATGACCATGGGC+AGG | + | chr5.4:20005941-20005960 | None:intergenic | 50.0% | |
| TTCCTGAACACTCTTGGGTG+TGG | - | chr5.4:20005243-20005262 | MS.gene027925:intron | 50.0% | |
| TTTGCAGATGCTGCAGCTTG+AGG | + | chr5.4:20006637-20006656 | None:intergenic | 50.0% | |
| ! | ATGCAGGAGCTTTAGTGCAC+CGG | - | chr5.4:20004377-20004396 | MS.gene027925:intron | 50.0% |
| ! | CTTTGCCGTACACGCTGATT+TGG | - | chr5.4:20003498-20003517 | MS.gene027925:CDS | 50.0% |
| ! | GGCACAATCTCTGGTACTGA+AGG | + | chr5.4:20006733-20006752 | None:intergenic | 50.0% |
| ! | GTAGGGGCATGTGTAGAAGT+CGG | - | chr5.4:20005995-20006014 | MS.gene027925:intron | 50.0% |
| ! | TTGCAGGAGCTTTAGTGCAC+CGG | - | chr5.4:20005045-20005064 | MS.gene027925:intron | 50.0% |
| ! | TTTCTGATGGAAGGCGTGTC+CGG | - | chr5.4:20003185-20003204 | MS.gene027925:CDS | 50.0% |
| !! | AAATGTCGGCGGTGCTACAA+AGG | + | chr5.4:20003168-20003187 | None:intergenic | 50.0% |
| !! | AATGTCGGCGGTGCTACAAA+GGG | + | chr5.4:20003167-20003186 | None:intergenic | 50.0% |
| !! | TTCCACACCCAAGAGTGTTC+AGG | + | chr5.4:20005248-20005267 | None:intergenic | 50.0% |
| !! | TTCGCGTTTAGCATCGGTGT+CGG | + | chr5.4:20002633-20002652 | None:intergenic | 50.0% |
| !!! | CCGGGCTACCCTTTTTTTAG+AGG | - | chr5.4:20004396-20004415 | MS.gene027925:intron | 50.0% |
| !!! | CCGGGCTGTCCTTTTTTAAG+AGG | - | chr5.4:20005064-20005083 | MS.gene027925:intron | 50.0% |
| AGCACCGCCGACATTTCTGA+TGG | - | chr5.4:20003172-20003191 | MS.gene027925:CDS | 55.0% | |
| ATGGCTCCCGAGACAGATGA+TGG | - | chr5.4:20006787-20006806 | MS.gene027925:intron | 55.0% | |
| CACCGACACGTGTCAGATAC+CGG | + | chr5.4:20003207-20003226 | None:intergenic | 55.0% | |
| CCGCCGACATTTCTGATGGA+AGG | - | chr5.4:20003176-20003195 | MS.gene027925:CDS | 55.0% | |
| GGAAGGTTGACCCAGATCGT+TGG | - | chr5.4:20005849-20005868 | MS.gene027925:intron | 55.0% | |
| GGCTTGAGGAAGAGGTTGAG+AGG | - | chr5.4:20006026-20006045 | MS.gene027925:intron | 55.0% | |
| GGTTCAGCGCCTTCAAGGAA+TGG | - | chr5.4:20006135-20006154 | MS.gene027925:intron | 55.0% | |
| GTCCGGTATCTGACACGTGT+CGG | - | chr5.4:20003202-20003221 | MS.gene027925:CDS | 55.0% | |
| TGACGGCCAGCTGCAAACAA+TGG | - | chr5.4:20006114-20006133 | MS.gene027925:intron | 55.0% | |
| TTCCACACCCAAGCGTGTTC+AGG | + | chr5.4:20004488-20004507 | None:intergenic | 55.0% | |
| TTCCTGAACACGCTTGGGTG+TGG | - | chr5.4:20004483-20004502 | MS.gene027925:intron | 55.0% | |
| ! | AAAATGGTGGGACCCCTTCC+CGG | - | chr5.4:20005013-20005032 | MS.gene027925:intron | 55.0% |
| ! | TGCAGGAGCTTTAGTGCACC+GGG | - | chr5.4:20004378-20004397 | MS.gene027925:intron | 55.0% |
| !! | CAAAAAGCGTCGGCTCAAGC+AGG | - | chr5.4:20006273-20006292 | MS.gene027925:intron | 55.0% |
| !! | CCGTACACGCTGATTTGGTG+TGG | - | chr5.4:20003503-20003522 | MS.gene027925:CDS | 55.0% |
| AGGTCCCTAGCGAATTCGGG+TGG | + | chr5.4:20002762-20002781 | None:intergenic | 60.0% | |
| CAAACGCAGGATCCGGGAAG+GGG | + | chr5.4:20005028-20005047 | None:intergenic | 60.0% | |
| CAACAGGCTCAGCAACCGCA+TGG | - | chr5.4:20005959-20005978 | MS.gene027925:intron | 60.0% | |
| CTCCTGCAAACGCAGGATCC+GGG | + | chr5.4:20005034-20005053 | None:intergenic | 60.0% | |
| GAGCAAGCTACCCCTCCTGA+TGG | - | chr5.4:20006316-20006335 | MS.gene027925:intron | 60.0% | |
| GCAAACGCAGGATCCGGGAA+GGG | + | chr5.4:20005029-20005048 | None:intergenic | 60.0% | |
| GCTCCTGCAAACGCAGGATC+CGG | + | chr5.4:20005035-20005054 | None:intergenic | 60.0% | |
| GGACCCACCCGAATTCGCTA+GGG | - | chr5.4:20002755-20002774 | MS.gene027925:CDS | 60.0% | |
| GGCGCGTTCGCGTTTAGCAT+CGG | + | chr5.4:20002639-20002658 | None:intergenic | 60.0% | |
| GGTCCCTAGCGAATTCGGGT+GGG | + | chr5.4:20002761-20002780 | None:intergenic | 60.0% | |
| TGCAAACGCAGGATCCGGGA+AGG | + | chr5.4:20005030-20005049 | None:intergenic | 60.0% | |
| TGGCTGCACCTCATTCCCTC+TGG | + | chr5.4:20006968-20006987 | None:intergenic | 60.0% | |
| TGTTTGCAGCTGGCCGTCAG+TGG | + | chr5.4:20006113-20006132 | None:intergenic | 60.0% | |
| TTCCCGGATCCTGCGTTTGC+AGG | - | chr5.4:20005029-20005048 | MS.gene027925:intron | 60.0% | |
| ! | GGGAAGGGGTCCCACCATTT+TGG | + | chr5.4:20005014-20005033 | None:intergenic | 60.0% |
| !! | AAGCGTCGGCTCAAGCAGGA+TGG | - | chr5.4:20006277-20006296 | MS.gene027925:intron | 60.0% |
| !! | ACCAGGGCTTTGGACGGCTT+TGG | + | chr5.4:20006194-20006213 | None:intergenic | 60.0% |
| !! | GGCTTTGGACGGCTTTGGCA+AGG | + | chr5.4:20006189-20006208 | None:intergenic | 60.0% |
| !! | TTTAGCATCGGTGTCGGCGC+CGG | + | chr5.4:20002627-20002646 | None:intergenic | 60.0% |
| GATGGAGCAAGCGGCGGAAG+TGG | - | chr5.4:20002573-20002592 | MS.gene027925:CDS | 65.0% | |
| GCCAAAGCCGTCCAAAGCCC+TGG | - | chr5.4:20006190-20006209 | MS.gene027925:intron | 65.0% | |
| GGGACCCACCCGAATTCGCT+AGG | - | chr5.4:20002754-20002773 | MS.gene027925:CDS | 65.0% | |
| !! | CGGTGTCGGCGCCGGTATTT+GGG | + | chr5.4:20002619-20002638 | None:intergenic | 65.0% |
| !! | TCGGTGTCGGCGCCGGTATT+TGG | + | chr5.4:20002620-20002639 | None:intergenic | 65.0% |
| !! | TGTCGGCGCCGGTATTTGGG+TGG | + | chr5.4:20002616-20002635 | None:intergenic | 65.0% |
| GGAGCAAGCGGCGGAAGTGG+CGG | - | chr5.4:20002576-20002595 | MS.gene027925:CDS | 70.0% | |
| GCAAGCGGCGGAAGTGGCGG+CGG | - | chr5.4:20002579-20002598 | MS.gene027925:CDS | 75.0% | |
| GGCGGAAGTGGCGGCGGAGA+GGG | - | chr5.4:20002585-20002604 | MS.gene027925:CDS | 75.0% | |
| ! | CGGCGGAAGTGGCGGCGGAG+AGG | - | chr5.4:20002584-20002603 | MS.gene027925:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 20002570 | 20007077 | 20002570 | ID=MS.gene027925 |
| chr5.4 | mRNA | 20002570 | 20007077 | 20002570 | ID=MS.gene027925.t1;Parent=MS.gene027925 |
| chr5.4 | exon | 20006826 | 20007077 | 20006826 | ID=MS.gene027925.t1.exon1;Parent=MS.gene027925.t1 |
| chr5.4 | CDS | 20006826 | 20007077 | 20006826 | ID=cds.MS.gene027925.t1;Parent=MS.gene027925.t1 |
| chr5.4 | exon | 20002570 | 20003805 | 20002570 | ID=MS.gene027925.t1.exon2;Parent=MS.gene027925.t1 |
| chr5.4 | CDS | 20002570 | 20003805 | 20002570 | ID=cds.MS.gene027925.t1;Parent=MS.gene027925.t1 |
| Gene Sequence |
| Protein sequence |