Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027925.t1 | AAV73838.1 | 98.6 | 502 | 0 | 1 | 1 | 495 | 1 | 502 | 1.10E-258 | 902.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027925.t1 | Q40152 | 54.9 | 499 | 164 | 14 | 30 | 486 | 37 | 516 | 2.3e-111 | 404.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027925.t1 | Q4L0F7 | 98.6 | 502 | 0 | 1 | 1 | 495 | 1 | 502 | 8.1e-259 | 902.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene027925.t1 | TF | HSF |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027925.t1 | MTR_5g029680 | 96.215 | 502 | 12 | 1 | 1 | 495 | 1 | 502 | 0.0 | 988 |
MS.gene027925.t1 | MTR_4g077970 | 45.709 | 501 | 211 | 19 | 31 | 492 | 11 | 489 | 2.12e-117 | 354 |
MS.gene027925.t1 | MTR_7g095680 | 54.978 | 231 | 93 | 2 | 9 | 232 | 26 | 252 | 1.39e-80 | 255 |
MS.gene027925.t1 | MTR_1g102860 | 54.043 | 235 | 88 | 6 | 10 | 234 | 16 | 240 | 1.93e-74 | 238 |
MS.gene027925.t1 | MTR_3g104550 | 54.222 | 225 | 80 | 6 | 19 | 233 | 33 | 244 | 1.94e-73 | 237 |
MS.gene027925.t1 | MTR_1g061170 | 47.773 | 247 | 108 | 5 | 18 | 257 | 35 | 267 | 1.64e-67 | 224 |
MS.gene027925.t1 | MTR_8g105780 | 43.911 | 271 | 127 | 7 | 32 | 293 | 22 | 276 | 3.72e-59 | 199 |
MS.gene027925.t1 | MTR_1g071360 | 46.725 | 229 | 93 | 5 | 19 | 237 | 19 | 228 | 8.16e-58 | 195 |
MS.gene027925.t1 | MTR_1g071360 | 46.725 | 229 | 93 | 5 | 19 | 237 | 16 | 225 | 1.35e-57 | 195 |
MS.gene027925.t1 | MTR_8g087540 | 50.538 | 186 | 74 | 3 | 31 | 207 | 11 | 187 | 6.88e-56 | 192 |
MS.gene027925.t1 | MTR_6g043060 | 47.867 | 211 | 89 | 5 | 32 | 235 | 22 | 218 | 1.24e-55 | 189 |
MS.gene027925.t1 | MTR_2g100680 | 45.116 | 215 | 98 | 3 | 26 | 233 | 25 | 226 | 9.75e-55 | 190 |
MS.gene027925.t1 | MTR_8g083100 | 48.095 | 210 | 88 | 5 | 33 | 235 | 23 | 218 | 1.03e-54 | 191 |
MS.gene027925.t1 | MTR_2g100670 | 47.980 | 198 | 85 | 2 | 20 | 210 | 21 | 207 | 1.67e-54 | 185 |
MS.gene027925.t1 | MTR_2g100670 | 48.958 | 192 | 80 | 2 | 26 | 210 | 135 | 315 | 2.07e-53 | 186 |
MS.gene027925.t1 | MTR_6g086805 | 42.723 | 213 | 101 | 6 | 28 | 233 | 7 | 205 | 8.91e-47 | 166 |
MS.gene027925.t1 | MTR_4g077970 | 37.293 | 362 | 176 | 16 | 162 | 492 | 1 | 342 | 1.65e-44 | 160 |
MS.gene027925.t1 | MTR_2g017890 | 41.622 | 185 | 97 | 3 | 31 | 208 | 14 | 194 | 2.02e-43 | 158 |
MS.gene027925.t1 | MTR_3g101870 | 39.594 | 197 | 64 | 3 | 29 | 170 | 21 | 217 | 1.31e-37 | 142 |
MS.gene027925.t1 | MTR_5g010680 | 65.957 | 94 | 25 | 1 | 30 | 116 | 22 | 115 | 6.54e-37 | 139 |
MS.gene027925.t1 | MTR_1g061170 | 44.318 | 176 | 84 | 4 | 82 | 257 | 11 | 172 | 2.58e-36 | 138 |
MS.gene027925.t1 | MTR_5g089170 | 42.408 | 191 | 91 | 3 | 29 | 200 | 22 | 212 | 1.23e-35 | 133 |
MS.gene027925.t1 | MTR_5g017470 | 42.458 | 179 | 64 | 4 | 29 | 171 | 6 | 181 | 3.45e-34 | 130 |
MS.gene027925.t1 | MTR_1g100777 | 60.638 | 94 | 30 | 1 | 30 | 116 | 16 | 109 | 4.56e-34 | 130 |
MS.gene027925.t1 | MTR_7g091370 | 44.737 | 152 | 75 | 2 | 29 | 171 | 19 | 170 | 5.84e-34 | 128 |
MS.gene027925.t1 | MTR_0020s0020 | 59.574 | 94 | 31 | 1 | 30 | 116 | 31 | 124 | 2.37e-32 | 127 |
MS.gene027925.t1 | MTR_4g088900 | 33.702 | 181 | 95 | 4 | 29 | 198 | 30 | 196 | 7.37e-25 | 102 |
MS.gene027925.t1 | MTR_4g045757 | 68.421 | 57 | 18 | 0 | 28 | 84 | 10 | 66 | 1.93e-21 | 88.6 |
MS.gene027925.t1 | MTR_5g047190 | 43.299 | 97 | 41 | 1 | 40 | 122 | 1 | 97 | 4.76e-21 | 88.2 |
MS.gene027925.t1 | MTR_6g044340 | 34.783 | 161 | 89 | 5 | 75 | 235 | 14 | 158 | 2.46e-19 | 88.2 |
MS.gene027925.t1 | MTR_2g043940 | 32.609 | 138 | 87 | 3 | 70 | 207 | 9 | 140 | 2.98e-17 | 84.0 |
MS.gene027925.t1 | MTR_1g061170 | 40.625 | 96 | 52 | 2 | 162 | 257 | 1 | 91 | 3.59e-12 | 67.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene027925.t1 | AT1G32330 | 52.652 | 509 | 168 | 15 | 9 | 489 | 11 | 474 | 6.78e-158 | 457 |
MS.gene027925.t1 | AT1G32330 | 52.652 | 509 | 168 | 15 | 9 | 489 | 11 | 474 | 1.06e-157 | 457 |
MS.gene027925.t1 | AT4G17750 | 47.834 | 531 | 189 | 16 | 1 | 494 | 16 | 495 | 1.89e-137 | 405 |
MS.gene027925.t1 | AT5G16820 | 48.928 | 513 | 190 | 15 | 18 | 494 | 4 | 480 | 2.00e-128 | 382 |
MS.gene027925.t1 | AT5G16820 | 48.928 | 513 | 190 | 15 | 18 | 494 | 4 | 480 | 2.00e-128 | 382 |
MS.gene027925.t1 | AT3G02990 | 47.347 | 490 | 188 | 19 | 31 | 494 | 22 | 467 | 3.36e-117 | 353 |
MS.gene027925.t1 | AT3G22830 | 53.982 | 226 | 96 | 2 | 14 | 232 | 43 | 267 | 1.91e-75 | 243 |
MS.gene027925.t1 | AT2G26150 | 55.157 | 223 | 85 | 4 | 19 | 233 | 31 | 246 | 2.45e-74 | 238 |
MS.gene027925.t1 | AT2G26150 | 55.157 | 223 | 85 | 4 | 19 | 233 | 31 | 246 | 2.45e-74 | 238 |
MS.gene027925.t1 | AT3G51910 | 49.309 | 217 | 79 | 5 | 25 | 232 | 22 | 216 | 1.94e-60 | 200 |
MS.gene027925.t1 | AT5G03720 | 44.000 | 250 | 122 | 4 | 14 | 256 | 37 | 275 | 1.40e-59 | 202 |
MS.gene027925.t1 | AT5G03720 | 44.000 | 250 | 122 | 4 | 14 | 256 | 37 | 275 | 1.40e-59 | 202 |
MS.gene027925.t1 | AT1G67970 | 50.521 | 192 | 80 | 4 | 32 | 215 | 19 | 203 | 2.03e-55 | 190 |
MS.gene027925.t1 | AT4G13980 | 43.805 | 226 | 95 | 6 | 33 | 248 | 24 | 227 | 1.79e-54 | 190 |
MS.gene027925.t1 | AT3G63350 | 43.602 | 211 | 99 | 3 | 18 | 219 | 12 | 211 | 1.78e-52 | 179 |
MS.gene027925.t1 | AT5G43840 | 40.081 | 247 | 110 | 6 | 18 | 257 | 5 | 220 | 2.26e-51 | 176 |
MS.gene027925.t1 | AT4G18880 | 42.723 | 213 | 106 | 3 | 25 | 227 | 8 | 214 | 4.33e-47 | 168 |
MS.gene027925.t1 | AT5G45710 | 35.664 | 286 | 147 | 6 | 31 | 304 | 12 | 272 | 1.53e-45 | 162 |
MS.gene027925.t1 | AT5G45710 | 35.664 | 286 | 147 | 6 | 31 | 304 | 12 | 272 | 1.53e-45 | 162 |
MS.gene027925.t1 | AT3G24520 | 40.385 | 208 | 87 | 3 | 32 | 232 | 17 | 194 | 1.36e-44 | 160 |
MS.gene027925.t1 | AT5G54070 | 41.204 | 216 | 99 | 4 | 32 | 236 | 71 | 269 | 1.40e-44 | 160 |
MS.gene027925.t1 | AT2G26150 | 54.667 | 150 | 60 | 3 | 85 | 233 | 49 | 191 | 4.35e-42 | 152 |
MS.gene027925.t1 | AT2G26150 | 54.667 | 150 | 60 | 3 | 85 | 233 | 49 | 191 | 4.35e-42 | 152 |
MS.gene027925.t1 | AT1G46264 | 41.361 | 191 | 61 | 4 | 29 | 170 | 31 | 219 | 6.04e-37 | 139 |
MS.gene027925.t1 | AT2G41690 | 38.710 | 186 | 83 | 3 | 30 | 188 | 38 | 219 | 3.25e-34 | 129 |
MS.gene027925.t1 | AT4G11660 | 60.638 | 94 | 30 | 1 | 30 | 116 | 57 | 150 | 2.50e-33 | 130 |
MS.gene027925.t1 | AT4G36990 | 51.639 | 122 | 39 | 2 | 29 | 143 | 11 | 119 | 9.28e-33 | 126 |
MS.gene027925.t1 | AT5G62020 | 55.556 | 99 | 37 | 1 | 30 | 121 | 21 | 119 | 1.83e-32 | 126 |
MS.gene027925.t1 | AT4G18870 | 48.864 | 88 | 38 | 2 | 32 | 112 | 146 | 233 | 9.93e-23 | 98.6 |
MS.gene027925.t1 | AT4G18870 | 50.000 | 86 | 37 | 2 | 33 | 112 | 14 | 99 | 1.01e-21 | 95.9 |
MS.gene027925.t1 | AT1G77570 | 40.000 | 90 | 44 | 2 | 33 | 112 | 27 | 116 | 5.01e-15 | 72.8 |
Find 140 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATTTGTTAAGCAATTCTATT+TGG | 0.145481 | 5.4:-20002741 | MS.gene027925:CDS |
TCGGTGTCGGCGCCGGTATT+TGG | 0.178029 | 5.4:+20007008 | None:intergenic |
AAAATTTCAAACAGGGTTTC+AGG | 0.206273 | 5.4:-20003797 | MS.gene027925:intron |
CCAACAACAGTTTCGTTGTT+TGG | 0.230125 | 5.4:-20006892 | MS.gene027925:CDS |
TGTGTAGAAGTCGGCAAATT+TGG | 0.235613 | 5.4:-20003621 | MS.gene027925:CDS |
TGAGGTACAGATAGAATTTC+AGG | 0.240310 | 5.4:+20003009 | None:intergenic |
CGAGACAGATGATGGATTTA+TGG | 0.242553 | 5.4:-20002830 | MS.gene027925:CDS |
TCACCAATCAAGTAATTATC+AGG | 0.249130 | 5.4:+20003183 | None:intergenic |
CATAGATGATTAAATTCTTT+TGG | 0.258523 | 5.4:+20002561 | None:intergenic |
CAAAAGGTCCCTAGCGAATT+CGG | 0.275635 | 5.4:+20006862 | None:intergenic |
TGGATCATTACCCATTGATT+TGG | 0.296226 | 5.4:-20002794 | MS.gene027925:CDS |
TTTGCTGTTTCATTCATCAT+AGG | 0.311359 | 5.4:+20003267 | None:intergenic |
CAACAACAGTTTCGTTGTTT+GGG | 0.319788 | 5.4:-20006891 | MS.gene027925:CDS |
CGGTGTCGGCGCCGGTATTT+GGG | 0.322223 | 5.4:+20007009 | None:intergenic |
CAACAGATGCGATAGTTTCA+TGG | 0.344788 | 5.4:-20006922 | MS.gene027925:CDS |
AACCCTGATAATTACTTGAT+TGG | 0.346275 | 5.4:-20003186 | MS.gene027925:CDS |
GTCGTTGCTCCATTCCTTGA+AGG | 0.347154 | 5.4:+20003481 | None:intergenic |
GCCTCAAAATCCTCTGGAAT+TGG | 0.349084 | 5.4:+20002700 | None:intergenic |
GTGTAGAAGTCGGCAAATTT+GGG | 0.362865 | 5.4:-20003620 | MS.gene027925:CDS |
TATACCTGAAGACAATTATA+TGG | 0.363191 | 5.4:-20002857 | MS.gene027925:CDS |
ACCAGGGCTTTGGACGGCTT+TGG | 0.378818 | 5.4:+20003434 | None:intergenic |
TTTGCAAATTCCCAACGATC+TGG | 0.381736 | 5.4:+20003765 | None:intergenic |
TCTGGTACTGAAGGTATATC+AGG | 0.389774 | 5.4:+20002904 | None:intergenic |
TCTGCTCTGTTAGTTGATCC+AGG | 0.390931 | 5.4:+20002605 | None:intergenic |
CAAATTTGGGCTTGAGGAAG+AGG | 0.394429 | 5.4:-20003607 | MS.gene027925:CDS |
ACTCAAATTCCAATGTCAAC+AGG | 0.397967 | 5.4:-20003063 | MS.gene027925:CDS |
TTTGTTAAGCAATTCTATTT+GGG | 0.398896 | 5.4:-20002740 | MS.gene027925:CDS |
GAGCAAAGAAACCAGGGCTT+TGG | 0.405473 | 5.4:+20003424 | None:intergenic |
TGCTAAGGAAGATCATGAAA+TGG | 0.411880 | 5.4:-20003239 | MS.gene027925:CDS |
GAGGTGCAGCCAACAGAAAA+TGG | 0.412142 | 5.4:-20002649 | MS.gene027925:CDS |
TATTTAACAATTTGTCCATC+AGG | 0.412857 | 5.4:+20003294 | None:intergenic |
GGAGCCATATAATTGTCTTC+AGG | 0.427662 | 5.4:+20002853 | None:intergenic |
GCTTGAAGAACTTCGGCAAA+AGG | 0.436166 | 5.4:+20006846 | None:intergenic |
AACAACAAAATGACAGCAAT+AGG | 0.448374 | 5.4:-20003392 | MS.gene027925:CDS |
GAAACTATCGCATCTGTTGA+AGG | 0.449248 | 5.4:+20006926 | None:intergenic |
TGCAGCCAACAGAAAATGGC+TGG | 0.460415 | 5.4:-20002645 | MS.gene027925:CDS |
TGAAAGACAATCCAAATCAA+TGG | 0.461549 | 5.4:+20002783 | None:intergenic |
GGCGCGTTCGCGTTTAGCAT+CGG | 0.464774 | 5.4:+20006989 | None:intergenic |
GATGGAGCAAGCGGCGGAAG+TGG | 0.466736 | 5.4:-20007052 | MS.gene027925:CDS |
ACAATGGTTCAGCGCCTTCA+AGG | 0.468085 | 5.4:-20003495 | MS.gene027925:CDS |
GCTGAACCATTGTTTGCAGC+TGG | 0.470479 | 5.4:+20003505 | None:intergenic |
GAAGGTTGACCCAGATCGTT+GGG | 0.471844 | 5.4:-20003775 | MS.gene027925:CDS |
CCATGGTCATACTCAACAAC+AGG | 0.472356 | 5.4:-20003682 | MS.gene027925:CDS |
CGTTGGGAATTTGCAAATGA+GGG | 0.474986 | 5.4:-20003759 | MS.gene027925:CDS |
ATGTTGGCCTCAAAATCCTC+TGG | 0.479139 | 5.4:+20002694 | None:intergenic |
GCTAAGGAAGATCATGAAAT+GGG | 0.481953 | 5.4:-20003238 | MS.gene027925:CDS |
GGCGGAAGTGGCGGCGGAGA+GGG | 0.482090 | 5.4:-20007040 | MS.gene027925:CDS |
GAAAGACAATCCAAATCAAT+GGG | 0.486613 | 5.4:+20002784 | None:intergenic |
GCCAAAGCCGTCCAAAGCCC+TGG | 0.488993 | 5.4:-20003435 | MS.gene027925:CDS |
CGGCGGAAGTGGCGGCGGAG+AGG | 0.492052 | 5.4:-20007041 | MS.gene027925:CDS |
ATAACATCTGCTTGAGAAGT+CGG | 0.493923 | 5.4:+20002931 | None:intergenic |
TGGCTGCACCTCATTCCCTC+TGG | 0.494605 | 5.4:+20002660 | None:intergenic |
CCAAACAACGAAACTGTTGT+TGG | 0.495551 | 5.4:+20006892 | None:intergenic |
TTTAGCATCGGTGTCGGCGC+CGG | 0.495901 | 5.4:+20007001 | None:intergenic |
CGAAATATCCAGAGGGAATG+AGG | 0.497477 | 5.4:-20002668 | MS.gene027925:CDS |
AAAAGGTCCCTAGCGAATTC+GGG | 0.501028 | 5.4:+20006863 | None:intergenic |
TAACATCTGCTTGAGAAGTC+GGG | 0.501630 | 5.4:+20002932 | None:intergenic |
GGGACCCACCCGAATTCGCT+AGG | 0.503998 | 5.4:-20006871 | MS.gene027925:CDS |
AGCTCTACAAGCTGGAACTC+GGG | 0.505067 | 5.4:-20003126 | MS.gene027925:CDS |
GCAAGCGGCGGAAGTGGCGG+CGG | 0.507070 | 5.4:-20007046 | MS.gene027925:CDS |
CATAAATCCATCATCTGTCT+CGG | 0.507108 | 5.4:+20002831 | None:intergenic |
CAAATCATCAATGTCTGCAC+CGG | 0.507465 | 5.4:+20002759 | None:intergenic |
TCGTTGGGAATTTGCAAATG+AGG | 0.508434 | 5.4:-20003760 | MS.gene027925:CDS |
CTGCTCTGTTAGTTGATCCA+GGG | 0.508669 | 5.4:+20002606 | None:intergenic |
CCTTGAGTCCCTGTTGACAT+TGG | 0.509700 | 5.4:+20003054 | None:intergenic |
GGAGCAAGCGGCGGAAGTGG+CGG | 0.510221 | 5.4:-20007049 | MS.gene027925:CDS |
TGAGTAGACTGCACTGAAGA+TGG | 0.510797 | 5.4:+20003081 | None:intergenic |
TTCGCGTTTAGCATCGGTGT+CGG | 0.511333 | 5.4:+20006995 | None:intergenic |
TTTATGGATCCGAGTTCACT+TGG | 0.511418 | 5.4:-20002814 | MS.gene027925:CDS |
TCTGGATATTTCGTCAATGT+TGG | 0.511981 | 5.4:+20002678 | None:intergenic |
TTGCAAATTCCCAACGATCT+GGG | 0.513798 | 5.4:+20003766 | None:intergenic |
TTGTTATGCTTGAAGAACTT+CGG | 0.516006 | 5.4:+20006839 | None:intergenic |
TCTGCAAATGTTATGAAGGA+TGG | 0.520402 | 5.4:-20002976 | MS.gene027925:CDS |
GGCTTTGGACGGCTTTGGCA+AGG | 0.521460 | 5.4:+20003439 | None:intergenic |
GGTTCAGCGCCTTCAAGGAA+TGG | 0.521472 | 5.4:-20003490 | MS.gene027925:CDS |
GGATCAACTAACAGAGCAGA+TGG | 0.526736 | 5.4:-20002602 | MS.gene027925:CDS |
ATGGCTCCCGAGACAGATGA+TGG | 0.528224 | 5.4:-20002838 | MS.gene027925:CDS |
GGAAGGTTGACCCAGATCGT+TGG | 0.529784 | 5.4:-20003776 | MS.gene027925:CDS |
TAGCTCTACAAGCTGGAACT+CGG | 0.530135 | 5.4:-20003127 | MS.gene027925:CDS |
TGTTTGCAGCTGGCCGTCAG+TGG | 0.533443 | 5.4:+20003515 | None:intergenic |
CAAGAATTCTCCGAAATGGA+TGG | 0.537798 | 5.4:-20007070 | None:intergenic |
AACAATTTGTCCATCAGGAG+GGG | 0.543951 | 5.4:+20003299 | None:intergenic |
ATAAATCCATCATCTGTCTC+GGG | 0.544485 | 5.4:+20002832 | None:intergenic |
GGACAATAATACTCAGCCCC+TGG | 0.544550 | 5.4:-20002623 | MS.gene027925:CDS |
TAACAATTTGTCCATCAGGA+GGG | 0.546075 | 5.4:+20003298 | None:intergenic |
GGGTTCAACCACCCAAATAC+CGG | 0.548137 | 5.4:-20007020 | MS.gene027925:CDS |
GAGCAAGCTACCCCTCCTGA+TGG | 0.552465 | 5.4:-20003309 | MS.gene027925:CDS |
GCTACTACTGTCCATTGCAC+TGG | 0.552846 | 5.4:+20003146 | None:intergenic |
GATAATTACTTGATTGGTGA+TGG | 0.554314 | 5.4:-20003180 | MS.gene027925:CDS |
TGCTCTGTTAGTTGATCCAG+GGG | 0.555861 | 5.4:+20002607 | None:intergenic |
CTCAAATTCCAATGTCAACA+GGG | 0.556788 | 5.4:-20003062 | MS.gene027925:CDS |
CTACTGTCCATTGCACTGGA+TGG | 0.557158 | 5.4:+20003150 | None:intergenic |
ATGGACAGAGTTCATCAGTA+GGG | 0.560915 | 5.4:-20003647 | MS.gene027925:CDS |
TTTGCAGATGCTGCAGCTTG+AGG | 0.562895 | 5.4:+20002991 | None:intergenic |
AAACAGCAAAAGCAATGCTA+AGG | 0.565264 | 5.4:-20003254 | MS.gene027925:CDS |
CCAATGTCAACAGGGACTCA+AGG | 0.569636 | 5.4:-20003054 | MS.gene027925:CDS |
TTTCAAACAGGGTTTCAGGA+AGG | 0.570624 | 5.4:-20003793 | MS.gene027925:intron |
GGTAATGATCCAAGTGAACT+CGG | 0.570835 | 5.4:+20002805 | None:intergenic |
GATTTGGATTGTCTTTCACC+CGG | 0.577390 | 5.4:-20002778 | MS.gene027925:CDS |
GGCTTGAGGAAGAGGTTGAG+AGG | 0.577943 | 5.4:-20003599 | MS.gene027925:CDS |
GGCACAATCTCTGGTACTGA+AGG | 0.579818 | 5.4:+20002895 | None:intergenic |
TTAACAATTTGTCCATCAGG+AGG | 0.580490 | 5.4:+20003297 | None:intergenic |
CACCAATCAAGTAATTATCA+GGG | 0.580602 | 5.4:+20003184 | None:intergenic |
AGCATCTGCAAATGTTATGA+AGG | 0.585668 | 5.4:-20002980 | MS.gene027925:CDS |
TGTCGGCGCCGGTATTTGGG+TGG | 0.587096 | 5.4:+20007012 | None:intergenic |
AGGTCCCTAGCGAATTCGGG+TGG | 0.590111 | 5.4:+20006866 | None:intergenic |
TACTTCACCATCCAGTGCAA+TGG | 0.590271 | 5.4:-20003157 | MS.gene027925:CDS |
CATGGACAGAGTTCATCAGT+AGG | 0.591063 | 5.4:-20003648 | MS.gene027925:CDS |
ACAAACTGAGCAAAGAAACC+AGG | 0.596219 | 5.4:+20003417 | None:intergenic |
GGACCCACCCGAATTCGCTA+GGG | 0.598350 | 5.4:-20006870 | MS.gene027925:CDS |
TGTTGAGTATGACCATGGGC+AGG | 0.599305 | 5.4:+20003687 | None:intergenic |
CAACAGGCTCAGCAACCGCA+TGG | 0.606577 | 5.4:-20003666 | MS.gene027925:CDS |
AAAGAAACCAGGGCTTTGGA+CGG | 0.607667 | 5.4:+20003428 | None:intergenic |
AGTCGGCAAATTTGGGCTTG+AGG | 0.610170 | 5.4:-20003613 | MS.gene027925:CDS |
TTCTCATGCAAGAGCTTGTG+AGG | 0.613430 | 5.4:-20003557 | MS.gene027925:CDS |
ACAGTAGTAGCTCTACAAGC+TGG | 0.613534 | 5.4:-20003134 | MS.gene027925:CDS |
GTAGGGGCATGTGTAGAAGT+CGG | 0.619207 | 5.4:-20003630 | MS.gene027925:CDS |
CAGCAGCAACAAACCACTGA+CGG | 0.620232 | 5.4:-20003528 | MS.gene027925:CDS |
TCCGAAATGGATGGAGCAAG+CGG | 0.623140 | 5.4:-20007061 | None:intergenic |
AAGCGTCGGCTCAAGCAGGA+TGG | 0.626260 | 5.4:-20003348 | MS.gene027925:CDS |
AAATCATCAATGTCTGCACC+GGG | 0.630153 | 5.4:+20002760 | None:intergenic |
TTTGAGCAAAACTTATGACA+TGG | 0.634177 | 5.4:-20006957 | MS.gene027925:CDS |
GCAGCCAACAGAAAATGGCT+GGG | 0.636582 | 5.4:-20002644 | MS.gene027925:CDS |
TCTGCAAACTCCAATTCCAG+AGG | 0.640517 | 5.4:-20002710 | MS.gene027925:CDS |
GATCAACTAACAGAGCAGAT+GGG | 0.641177 | 5.4:-20002601 | MS.gene027925:CDS |
CTCGGGAGTAACTCTTCAAG+AGG | 0.645660 | 5.4:-20003109 | MS.gene027925:CDS |
TGACGGCCAGCTGCAAACAA+TGG | 0.646370 | 5.4:-20003511 | MS.gene027925:CDS |
CCTGTTGTTGAGTATGACCA+TGG | 0.647258 | 5.4:+20003682 | None:intergenic |
ACATTGACGAAATATCCAGA+GGG | 0.654829 | 5.4:-20002675 | MS.gene027925:CDS |
TGGACAGAGTTCATCAGTAG+GGG | 0.659673 | 5.4:-20003646 | MS.gene027925:CDS |
AGTCGAAGAAAACCTGCCCA+TGG | 0.665848 | 5.4:-20003699 | MS.gene027925:CDS |
CAAACTGAGCAAAGAAACCA+GGG | 0.668272 | 5.4:+20003418 | None:intergenic |
GGTCCCTAGCGAATTCGGGT+GGG | 0.673393 | 5.4:+20006867 | None:intergenic |
CTGTTGTTGAGTATGACCAT+GGG | 0.673452 | 5.4:+20003683 | None:intergenic |
GAAATGGATGGAGCAAGCGG+CGG | 0.687946 | 5.4:-20007058 | MS.gene027925:CDS |
AACATTGACGAAATATCCAG+AGG | 0.690077 | 5.4:-20002676 | MS.gene027925:CDS |
GAGCAAAACTTATGACATGG+TGG | 0.697463 | 5.4:-20006954 | MS.gene027925:CDS |
GTAGACTGCACTGAAGATGG+AGG | 0.697646 | 5.4:+20003084 | None:intergenic |
ACTGATGAACTCTGTCCATG+CGG | 0.724135 | 5.4:+20003651 | None:intergenic |
TTATTGAAAGATTCTACACG+CGG | 0.735179 | 5.4:+20003210 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATTATAGTATGTA+AGG | - | chr5.4:20003824-20003843 | MS.gene027925:intron | 10.0% |
!! | TTACAAAAATTGAAAAATAT+AGG | + | chr5.4:20004032-20004051 | None:intergenic | 10.0% |
!!! | AGTATTTTTCTTATAATTAG+AGG | - | chr5.4:20004325-20004344 | MS.gene027925:intron | 15.0% |
!!! | AGTATTTTTCTTATAATTTG+AGG | - | chr5.4:20004968-20004987 | MS.gene027925:intron | 15.0% |
!!! | TCACAATCATTTTTTTTTTT+GGG | - | chr5.4:20003342-20003361 | MS.gene027925:CDS | 15.0% |
!! | AAAAAAAATGATTGTGAGAA+TGG | + | chr5.4:20003339-20003358 | None:intergenic | 20.0% |
!! | AAAAAAATGATTGTGAGAAT+GGG | + | chr5.4:20003338-20003357 | None:intergenic | 20.0% |
!! | CAATTAAAATGAAAGAGATA+GGG | - | chr5.4:20003601-20003620 | MS.gene027925:CDS | 20.0% |
!! | CATTGTATATTCAATATCAA+AGG | - | chr5.4:20003799-20003818 | MS.gene027925:intron | 20.0% |
!! | TCAATTAAAATGAAAGAGAT+AGG | - | chr5.4:20003600-20003619 | MS.gene027925:CDS | 20.0% |
!! | TTATGGAAAATAAACTTTCT+TGG | - | chr5.4:20004574-20004593 | MS.gene027925:intron | 20.0% |
!! | TTCCTATAAAATTTCAAACA+GGG | - | chr5.4:20005821-20005840 | MS.gene027925:intron | 20.0% |
!! | TTTCCTATAAAATTTCAAAC+AGG | - | chr5.4:20005820-20005839 | MS.gene027925:intron | 20.0% |
!! | TTTGTTAAGCAATTCTATTT+GGG | - | chr5.4:20006885-20006904 | MS.gene027925:CDS | 20.0% |
!!! | AAAACTTTAGCTTTTTGTTA+TGG | - | chr5.4:20005330-20005349 | MS.gene027925:intron | 20.0% |
!!! | AAAGTGTTTAATTTACTTTG+TGG | - | chr5.4:20002980-20002999 | MS.gene027925:CDS | 20.0% |
!!! | AAGTGTTTAATTTACTTTGT+GGG | - | chr5.4:20002981-20003000 | MS.gene027925:CDS | 20.0% |
!!! | ACTTATTATCCTCTAAAAAA+AGG | + | chr5.4:20004408-20004427 | None:intergenic | 20.0% |
!!! | ATCTCTTTCATTTTAATTGA+AGG | + | chr5.4:20003600-20003619 | None:intergenic | 20.0% |
!!! | ATTATTATGAAGAGGATTTT+AGG | - | chr5.4:20003861-20003880 | MS.gene027925:intron | 20.0% |
!!! | ATTTGTTAAGCAATTCTATT+TGG | - | chr5.4:20006884-20006903 | MS.gene027925:CDS | 20.0% |
!!! | ATTTTATAGGAAAAATAGTC+AGG | + | chr5.4:20005813-20005832 | None:intergenic | 20.0% |
!!! | ATTTTGTTTGATTTGAGTTT+TGG | - | chr5.4:20002886-20002905 | MS.gene027925:CDS | 20.0% |
!!! | CACAATCATTTTTTTTTTTG+GGG | - | chr5.4:20003343-20003362 | MS.gene027925:CDS | 20.0% |
!!! | CTCACAATCATTTTTTTTTT+TGG | - | chr5.4:20003341-20003360 | MS.gene027925:CDS | 20.0% |
!!! | CTTATTATCCTCTAAAAAAA+GGG | + | chr5.4:20004407-20004426 | None:intergenic | 20.0% |
!!! | TAATTAGTATGTTTTTATGC+AGG | - | chr5.4:20004361-20004380 | MS.gene027925:intron | 20.0% |
!!! | TGATGTTTTTGTTAATTTGT+GGG | - | chr5.4:20003022-20003041 | MS.gene027925:CDS | 20.0% |
!!! | TTATTATGAAGAGGATTTTA+GGG | - | chr5.4:20003862-20003881 | MS.gene027925:intron | 20.0% |
!!! | TTGATGTTTTTGTTAATTTG+TGG | - | chr5.4:20003021-20003040 | MS.gene027925:CDS | 20.0% |
!!! | TTTTGTAAGACAAATGATAA+AGG | - | chr5.4:20004044-20004063 | MS.gene027925:intron | 20.0% |
! | AAAAAGAGAGAAGACAATTA+AGG | + | chr5.4:20005712-20005731 | None:intergenic | 25.0% |
! | AATGTAGTTTATGATACGAT+AGG | - | chr5.4:20004145-20004164 | MS.gene027925:intron | 25.0% |
! | AGTAAATTTCCTTACTTTCA+CGG | + | chr5.4:20003573-20003592 | None:intergenic | 25.0% |
! | AGTAGATTAACAAAATCAAC+TGG | + | chr5.4:20004460-20004479 | None:intergenic | 25.0% |
! | ATGACACTAAATGATAAAGA+GGG | + | chr5.4:20003386-20003405 | None:intergenic | 25.0% |
! | ATTGATTGTATCAAAACACT+AGG | - | chr5.4:20005134-20005153 | MS.gene027925:intron | 25.0% |
! | CAGTTAATTATAACCCATAA+AGG | + | chr5.4:20004824-20004843 | None:intergenic | 25.0% |
! | CTTTATTGTCAACTTAGTTA+AGG | + | chr5.4:20005454-20005473 | None:intergenic | 25.0% |
! | GATATTGAATATACAATGCA+TGG | + | chr5.4:20003797-20003816 | None:intergenic | 25.0% |
! | GTAGATTAACAAAATCAACT+GGG | + | chr5.4:20004459-20004478 | None:intergenic | 25.0% |
! | GTTAAGGTTCAAAAGATAAA+TGG | + | chr5.4:20004666-20004685 | None:intergenic | 25.0% |
! | GTTAATCAGTTACTTGATTA+TGG | - | chr5.4:20003762-20003781 | MS.gene027925:CDS | 25.0% |
! | GTTTATTGTCAACTTAGTTA+AGG | + | chr5.4:20004682-20004701 | None:intergenic | 25.0% |
! | TAAAATATCAGCACTCAATT+TGG | - | chr5.4:20004779-20004798 | MS.gene027925:intron | 25.0% |
! | TATACCTGAAGACAATTATA+TGG | - | chr5.4:20006768-20006787 | MS.gene027925:intron | 25.0% |
! | TATTTAACAATTTGTCCATC+AGG | + | chr5.4:20006334-20006353 | None:intergenic | 25.0% |
! | TCCTATTATCCTCTTAAAAA+AGG | + | chr5.4:20005076-20005095 | None:intergenic | 25.0% |
! | TTTGATCTATGATTATACTG+TGG | - | chr5.4:20003049-20003068 | MS.gene027925:CDS | 25.0% |
!! | AGTGTTTAATTTACTTTGTG+GGG | - | chr5.4:20002982-20003001 | MS.gene027925:CDS | 25.0% |
!! | ATGTTTTATCAAACCCATAA+AGG | + | chr5.4:20005596-20005615 | None:intergenic | 25.0% |
!! | GATTTTTGAACTGTTTGTTT+TGG | - | chr5.4:20003108-20003127 | MS.gene027925:CDS | 25.0% |
!! | GGTATATCAAGAATACTTTT+AGG | + | chr5.4:20006754-20006773 | None:intergenic | 25.0% |
!! | TCATAAGTTTTGCTCAAAAA+CGG | + | chr5.4:20002666-20002685 | None:intergenic | 25.0% |
!!! | AACCCTGTTTGAAATTTTAT+AGG | + | chr5.4:20005826-20005845 | None:intergenic | 25.0% |
!!! | ACAACTTTAGCTTTTAGTTA+TGG | - | chr5.4:20004557-20004576 | MS.gene027925:intron | 25.0% |
!!! | TCCTTTTTTAAGAGGATAAT+AGG | - | chr5.4:20005072-20005091 | MS.gene027925:intron | 25.0% |
!!! | TCGAAAGTTGTGTTTTTTTA+TGG | - | chr5.4:20005771-20005790 | MS.gene027925:intron | 25.0% |
!!! | TGTTTTGGTGAAATATAATG+AGG | - | chr5.4:20003123-20003142 | MS.gene027925:CDS | 25.0% |
AAAATTTCAAACAGGGTTTC+AGG | - | chr5.4:20005828-20005847 | MS.gene027925:intron | 30.0% | |
AACAACAAAATGACAGCAAT+AGG | - | chr5.4:20006233-20006252 | MS.gene027925:intron | 30.0% | |
AACCCTGATAATTACTTGAT+TGG | - | chr5.4:20006439-20006458 | MS.gene027925:intron | 30.0% | |
AATTAAGCTAGGTGTATCAA+TGG | + | chr5.4:20004618-20004637 | None:intergenic | 30.0% | |
AGTTGACAATAAAGAGATAG+TGG | - | chr5.4:20005460-20005479 | MS.gene027925:intron | 30.0% | |
ATAAATTCACAGCAAGTAAG+TGG | + | chr5.4:20005110-20005129 | None:intergenic | 30.0% | |
ATACCAGTATGTATTCAACT+TGG | - | chr5.4:20004102-20004121 | MS.gene027925:intron | 30.0% | |
ATCTGAATTGTGGTTATAAG+GGG | - | chr5.4:20003462-20003481 | MS.gene027925:CDS | 30.0% | |
ATGCCAATAACAAAATCAAC+TGG | + | chr5.4:20005198-20005217 | None:intergenic | 30.0% | |
ATTAAGGATGTGCAACAATA+TGG | + | chr5.4:20005696-20005715 | None:intergenic | 30.0% | |
CAATAAGCTATGTGTATCAA+TGG | + | chr5.4:20005391-20005410 | None:intergenic | 30.0% | |
CACCAATCAAGTAATTATCA+GGG | + | chr5.4:20006444-20006463 | None:intergenic | 30.0% | |
CATGACACTAAATGATAAAG+AGG | + | chr5.4:20003387-20003406 | None:intergenic | 30.0% | |
CGTAGTGAATTATTATGAAG+AGG | - | chr5.4:20003853-20003872 | MS.gene027925:intron | 30.0% | |
CTCTTTATCATTTAGTGTCA+TGG | - | chr5.4:20003385-20003404 | MS.gene027925:CDS | 30.0% | |
GAAAGACAATCCAAATCAAT+GGG | + | chr5.4:20006844-20006863 | None:intergenic | 30.0% | |
GATAATTACTTGATTGGTGA+TGG | - | chr5.4:20006445-20006464 | MS.gene027925:intron | 30.0% | |
GATCTGAATTGTGGTTATAA+GGG | - | chr5.4:20003461-20003480 | MS.gene027925:CDS | 30.0% | |
GCTTAAAAGTAAGAATGCAA+CGG | + | chr5.4:20004304-20004323 | None:intergenic | 30.0% | |
GCTTAAAAGTAAGAATGCAA+TGG | + | chr5.4:20004304-20004323 | None:intergenic | 30.0% | |
GCTTTATAGTTAACTGCTTT+AGG | - | chr5.4:20004196-20004215 | MS.gene027925:intron | 30.0% | |
GGATGTGTATATAACAACAT+AGG | - | chr5.4:20004166-20004185 | MS.gene027925:intron | 30.0% | |
GTTTCCTTCTTTCAAAAGAA+TGG | - | chr5.4:20003641-20003660 | MS.gene027925:CDS | 30.0% | |
TAAAATGAAAGAGATAGGGT+GGG | - | chr5.4:20003605-20003624 | MS.gene027925:CDS | 30.0% | |
TAGTATTACACACTCAATTC+TGG | + | chr5.4:20005652-20005671 | None:intergenic | 30.0% | |
TATAGGAAAAATAGTCAGGA+AGG | + | chr5.4:20005809-20005828 | None:intergenic | 30.0% | |
TCACCAATCAAGTAATTATC+AGG | + | chr5.4:20006445-20006464 | None:intergenic | 30.0% | |
TGAAAGACAATCCAAATCAA+TGG | + | chr5.4:20006845-20006864 | None:intergenic | 30.0% | |
TGATCTGAATTGTGGTTATA+AGG | - | chr5.4:20003460-20003479 | MS.gene027925:CDS | 30.0% | |
TGCCAATAACAAAATCAACT+GGG | + | chr5.4:20005197-20005216 | None:intergenic | 30.0% | |
TTAAAATGAAAGAGATAGGG+TGG | - | chr5.4:20003604-20003623 | MS.gene027925:CDS | 30.0% | |
TTATGAACTTTGCAATGATG+TGG | - | chr5.4:20004225-20004244 | MS.gene027925:intron | 30.0% | |
TTATTGAAAGATTCTACACG+CGG | + | chr5.4:20006418-20006437 | None:intergenic | 30.0% | |
TTGTTATGCTTGAAGAACTT+CGG | + | chr5.4:20002789-20002808 | None:intergenic | 30.0% | |
TTTGAGCAAAACTTATGACA+TGG | - | chr5.4:20002668-20002687 | MS.gene027925:CDS | 30.0% | |
! | AAACATGTCACTTACATTAC+AGG | + | chr5.4:20003925-20003944 | None:intergenic | 30.0% |
! | AACATGTCACTTACATTACA+GGG | + | chr5.4:20003924-20003943 | None:intergenic | 30.0% |
! | AAGTACTGCTATCAGTATAA+TGG | - | chr5.4:20003995-20004014 | MS.gene027925:intron | 30.0% |
! | CTTCTTTCTCACTCTTTTAA+CGG | - | chr5.4:20002856-20002875 | MS.gene027925:CDS | 30.0% |
! | TTATACTGTGGATGTTGATT+TGG | - | chr5.4:20003061-20003080 | MS.gene027925:CDS | 30.0% |
! | TTTCTGGACATAAGACTTTT+GGG | - | chr5.4:20005510-20005529 | MS.gene027925:intron | 30.0% |
! | TTTGTGGACATAAGACTTTT+GGG | - | chr5.4:20004738-20004757 | MS.gene027925:intron | 30.0% |
!! | AGAATTATTTGCTATGAAGC+TGG | - | chr5.4:20003892-20003911 | MS.gene027925:intron | 30.0% |
!! | CTATCCATTCTTTTGAAAGA+AGG | + | chr5.4:20003648-20003667 | None:intergenic | 30.0% |
!! | GGATGTTGATTTGGTTTAAT+GGG | - | chr5.4:20003070-20003089 | MS.gene027925:CDS | 30.0% |
!! | TGGATGTTGATTTGGTTTAA+TGG | - | chr5.4:20003069-20003088 | MS.gene027925:CDS | 30.0% |
!! | TTTGCTGTTTCATTCATCAT+AGG | + | chr5.4:20006361-20006380 | None:intergenic | 30.0% |
!! | TTTGTTATTGGCATTCGTTA+AGG | - | chr5.4:20005204-20005223 | MS.gene027925:intron | 30.0% |
AAACAGCAAAAGCAATGCTA+AGG | - | chr5.4:20006371-20006390 | MS.gene027925:intron | 35.0% | |
AACATTGACGAAATATCCAG+AGG | - | chr5.4:20006949-20006968 | MS.gene027925:CDS | 35.0% | |
AACTGATCAGTTACTGCTTT+AGG | - | chr5.4:20004839-20004858 | MS.gene027925:intron | 35.0% | |
ACATTGACGAAATATCCAGA+GGG | - | chr5.4:20006950-20006969 | MS.gene027925:CDS | 35.0% | |
ACTTTCTTGGATTCAACTTC+TGG | - | chr5.4:20004587-20004606 | MS.gene027925:intron | 35.0% | |
AGCATCTGCAAATGTTATGA+AGG | - | chr5.4:20006645-20006664 | MS.gene027925:intron | 35.0% | |
ATAAATCCATCATCTGTCTC+GGG | + | chr5.4:20006796-20006815 | None:intergenic | 35.0% | |
ATAACATCTGCTTGAGAAGT+CGG | + | chr5.4:20006697-20006716 | None:intergenic | 35.0% | |
ATATCAGCACTCAATTTGGT+TGG | - | chr5.4:20004783-20004802 | MS.gene027925:intron | 35.0% | |
ATGTGCAACAATATGGCTAA+AGG | + | chr5.4:20005689-20005708 | None:intergenic | 35.0% | |
ATTCAATACGCCAAAATGGT+GGG | - | chr5.4:20005001-20005020 | MS.gene027925:intron | 35.0% | |
CAACAACAGTTTCGTTGTTT+GGG | - | chr5.4:20002734-20002753 | MS.gene027925:CDS | 35.0% | |
CAGCTCATATCAATTAAGCT+AGG | + | chr5.4:20004629-20004648 | None:intergenic | 35.0% | |
CATAAATCCATCATCTGTCT+CGG | + | chr5.4:20006797-20006816 | None:intergenic | 35.0% | |
GACTGGTATACATCCTTTAT+GGG | - | chr5.4:20004808-20004827 | MS.gene027925:intron | 35.0% | |
GCTAAGGAAGATCATGAAAT+GGG | - | chr5.4:20006387-20006406 | MS.gene027925:intron | 35.0% | |
GTATGTACTTTGCAATGATG+TGG | - | chr5.4:20004868-20004887 | MS.gene027925:intron | 35.0% | |
TAACAATTTGTCCATCAGGA+GGG | + | chr5.4:20006330-20006349 | None:intergenic | 35.0% | |
TAGTGATGTGATCTGAATTG+TGG | - | chr5.4:20003452-20003471 | MS.gene027925:CDS | 35.0% | |
TATAATGAGGAGTGGAAAGA+TGG | - | chr5.4:20003136-20003155 | MS.gene027925:CDS | 35.0% | |
TATCAGCACTCAATTTGGTT+GGG | - | chr5.4:20004784-20004803 | MS.gene027925:intron | 35.0% | |
TCTGAATTGTGGTTATAAGG+GGG | - | chr5.4:20003463-20003482 | MS.gene027925:CDS | 35.0% | |
TCTGCAAATGTTATGAAGGA+TGG | - | chr5.4:20006649-20006668 | MS.gene027925:intron | 35.0% | |
TCTGGATATTTCGTCAATGT+TGG | + | chr5.4:20006950-20006969 | None:intergenic | 35.0% | |
TGACAAAGAAAGCTATTCTC+AGG | - | chr5.4:20003740-20003759 | MS.gene027925:CDS | 35.0% | |
TGACTGGTATACATCCTTTA+TGG | - | chr5.4:20004807-20004826 | MS.gene027925:intron | 35.0% | |
TGAGGTACAGATAGAATTTC+AGG | + | chr5.4:20006619-20006638 | None:intergenic | 35.0% | |
TGCTAAGGAAGATCATGAAA+TGG | - | chr5.4:20006386-20006405 | MS.gene027925:intron | 35.0% | |
TGGTGAAATATAATGAGGAG+TGG | - | chr5.4:20003128-20003147 | MS.gene027925:CDS | 35.0% | |
TGTTCAGGAAACTAGTAGAT+TGG | + | chr5.4:20005233-20005252 | None:intergenic | 35.0% | |
TTAACAATTTGTCCATCAGG+AGG | + | chr5.4:20006331-20006350 | None:intergenic | 35.0% | |
! | ATACTTTTAGGCACAATCTC+TGG | + | chr5.4:20006742-20006761 | None:intergenic | 35.0% |
! | ATGGTTTTCTTCGAGTGAAA+TGG | - | chr5.4:20003404-20003423 | MS.gene027925:CDS | 35.0% |
! | GTTTGTGGACATAAGACTTT+TGG | - | chr5.4:20004737-20004756 | MS.gene027925:intron | 35.0% |
! | TAAGTTTTGCTCAAAAACGG+TGG | + | chr5.4:20002663-20002682 | None:intergenic | 35.0% |
! | TCACCAAGTTGAATACATAC+TGG | + | chr5.4:20004108-20004127 | None:intergenic | 35.0% |
! | TGGATCATTACCCATTGATT+TGG | - | chr5.4:20006831-20006850 | MS.gene027925:CDS | 35.0% |
!! | AGCCCAGTTGATTTTGTTAT+TGG | - | chr5.4:20005192-20005211 | MS.gene027925:intron | 35.0% |
!! | ATTTGCTATGAAGCTGGTAT+TGG | - | chr5.4:20003898-20003917 | MS.gene027925:intron | 35.0% |
!! | GCATGTTTTTATGTAGCATG+AGG | - | chr5.4:20004921-20004940 | MS.gene027925:intron | 35.0% |
!! | GTTTCTGGACATAAGACTTT+TGG | - | chr5.4:20005509-20005528 | MS.gene027925:intron | 35.0% |
!! | TGATTTGGTGTGGTTGAATT+AGG | - | chr5.4:20003513-20003532 | MS.gene027925:CDS | 35.0% |
!!! | AATTTCAGGTTTTTCTGCTG+AGG | + | chr5.4:20006605-20006624 | None:intergenic | 35.0% |
!!! | ATTTCAGGTTTTTCTGCTGA+GGG | + | chr5.4:20006604-20006623 | None:intergenic | 35.0% |
!!! | TGAGTGCTGATATTTTACTC+AGG | + | chr5.4:20004776-20004795 | None:intergenic | 35.0% |
AAATCATCAATGTCTGCACC+GGG | + | chr5.4:20006868-20006887 | None:intergenic | 40.0% | |
AACAATTTGTCCATCAGGAG+GGG | + | chr5.4:20006329-20006348 | None:intergenic | 40.0% | |
AATTCTTCCCTCTTCAAACC+TGG | - | chr5.4:20005626-20005645 | MS.gene027925:intron | 40.0% | |
ACAAACTGAGCAAAGAAACC+AGG | + | chr5.4:20006211-20006230 | None:intergenic | 40.0% | |
ACTAATTTCCTGAACACGCT+TGG | - | chr5.4:20004477-20004496 | MS.gene027925:intron | 40.0% | |
AGAGATAGGGTGGGAATTAT+TGG | - | chr5.4:20003614-20003633 | MS.gene027925:CDS | 40.0% | |
ATGGACAGAGTTCATCAGTA+GGG | - | chr5.4:20005978-20005997 | MS.gene027925:intron | 40.0% | |
CAAACTGAGCAAAGAAACCA+GGG | + | chr5.4:20006210-20006229 | None:intergenic | 40.0% | |
CAAATCATCAATGTCTGCAC+CGG | + | chr5.4:20006869-20006888 | None:intergenic | 40.0% | |
CAACAGATGCGATAGTTTCA+TGG | - | chr5.4:20002703-20002722 | MS.gene027925:CDS | 40.0% | |
CATCTAGTTGCTGACAATGT+AGG | + | chr5.4:20003702-20003721 | None:intergenic | 40.0% | |
CATTCAATACGCCAAAATGG+TGG | - | chr5.4:20005000-20005019 | MS.gene027925:intron | 40.0% | |
CCAAACAACGAAACTGTTGT+TGG | + | chr5.4:20002736-20002755 | None:intergenic | 40.0% | |
CCAACAACAGTTTCGTTGTT+TGG | - | chr5.4:20002733-20002752 | MS.gene027925:CDS | 40.0% | |
CGTTGGGAATTTGCAAATGA+GGG | - | chr5.4:20005866-20005885 | MS.gene027925:intron | 40.0% | |
CTAATTTCCTGAACACGCTT+GGG | - | chr5.4:20004478-20004497 | MS.gene027925:intron | 40.0% | |
CTACATTGTCAGCAACTAGA+TGG | - | chr5.4:20003700-20003719 | MS.gene027925:CDS | 40.0% | |
CTAGTTTCCTGAACACTCTT+GGG | - | chr5.4:20005238-20005257 | MS.gene027925:intron | 40.0% | |
CTGCATTCAATACGCCAAAA+TGG | - | chr5.4:20004997-20005016 | MS.gene027925:intron | 40.0% | |
CTGTTGTTGAGTATGACCAT+GGG | + | chr5.4:20005945-20005964 | None:intergenic | 40.0% | |
GAAACTATCGCATCTGTTGA+AGG | + | chr5.4:20002702-20002721 | None:intergenic | 40.0% | |
GAGCAAAACTTATGACATGG+TGG | - | chr5.4:20002671-20002690 | MS.gene027925:CDS | 40.0% | |
GATCAACTAACAGAGCAGAT+GGG | - | chr5.4:20007024-20007043 | MS.gene027925:CDS | 40.0% | |
GATTTGGATTGTCTTTCACC+CGG | - | chr5.4:20006847-20006866 | MS.gene027925:CDS | 40.0% | |
GCATGTTCTTATGTAGCATG+AGG | - | chr5.4:20004278-20004297 | MS.gene027925:intron | 40.0% | |
GGAGCCATATAATTGTCTTC+AGG | + | chr5.4:20006775-20006794 | None:intergenic | 40.0% | |
GGTAATGATCCAAGTGAACT+CGG | + | chr5.4:20006823-20006842 | None:intergenic | 40.0% | |
GTGTAGAAGTCGGCAAATTT+GGG | - | chr5.4:20006005-20006024 | MS.gene027925:intron | 40.0% | |
GTTAAACTGATCTGCAGAGA+AGG | + | chr5.4:20004537-20004556 | None:intergenic | 40.0% | |
TAACATCTGCTTGAGAAGTC+GGG | + | chr5.4:20006696-20006715 | None:intergenic | 40.0% | |
TAGTTGCTGACAATGTAGGA+GGG | + | chr5.4:20003698-20003717 | None:intergenic | 40.0% | |
TCAACTGAACCGTGAAAGTA+AGG | - | chr5.4:20003561-20003580 | MS.gene027925:CDS | 40.0% | |
TCGTTGGGAATTTGCAAATG+AGG | - | chr5.4:20005865-20005884 | MS.gene027925:intron | 40.0% | |
TGCAATGATGTGGAACTGAT+CGG | - | chr5.4:20004235-20004254 | MS.gene027925:intron | 40.0% | |
TGTGTAGAAGTCGGCAAATT+TGG | - | chr5.4:20006004-20006023 | MS.gene027925:intron | 40.0% | |
TTACTTTCACGGTTCAGTTG+AGG | + | chr5.4:20003562-20003581 | None:intergenic | 40.0% | |
TTCTTCGAGTGAAATGGTGA+CGG | - | chr5.4:20003410-20003429 | MS.gene027925:CDS | 40.0% | |
TTGCAAATTCCCAACGATCT+GGG | + | chr5.4:20005862-20005881 | None:intergenic | 40.0% | |
TTTATGGATCCGAGTTCACT+TGG | - | chr5.4:20006811-20006830 | MS.gene027925:intron | 40.0% | |
TTTCAAACAGGGTTTCAGGA+AGG | - | chr5.4:20005832-20005851 | MS.gene027925:intron | 40.0% | |
TTTGCAAATTCCCAACGATC+TGG | + | chr5.4:20005863-20005882 | None:intergenic | 40.0% | |
! | AATCAACTGGGCTTTTCACA+AGG | + | chr5.4:20005185-20005204 | None:intergenic | 40.0% |
! | ACTAGTTTCCTGAACACTCT+TGG | - | chr5.4:20005237-20005256 | MS.gene027925:intron | 40.0% |
! | CTGAAGTCAACAAAAAGCGT+CGG | - | chr5.4:20006263-20006282 | MS.gene027925:intron | 40.0% |
! | GTGTTGCTCAATTTATCCTC+AGG | - | chr5.4:20004710-20004729 | MS.gene027925:intron | 40.0% |
! | TCCAATTCCAGAGGATTTTG+AGG | - | chr5.4:20006924-20006943 | MS.gene027925:CDS | 40.0% |
! | TCTGGTACTGAAGGTATATC+AGG | + | chr5.4:20006724-20006743 | None:intergenic | 40.0% |
! | TGCAAATGAGGGCTTTTTGA+GGG | - | chr5.4:20005877-20005896 | MS.gene027925:intron | 40.0% |
! | TTGCAAATGAGGGCTTTTTG+AGG | - | chr5.4:20005876-20005895 | MS.gene027925:intron | 40.0% |
!! | CAGTTACTGCTTTAGGAAGA+TGG | - | chr5.4:20004846-20004865 | MS.gene027925:intron | 40.0% |
!! | CGAGACAGATGATGGATTTA+TGG | - | chr5.4:20006795-20006814 | MS.gene027925:intron | 40.0% |
!! | TGGACATAAGACTTTTGGGA+TGG | - | chr5.4:20004742-20004761 | MS.gene027925:intron | 40.0% |
!!! | TTTCAGGTTTTTCTGCTGAG+GGG | + | chr5.4:20006603-20006622 | None:intergenic | 40.0% |
AAAAGGTCCCTAGCGAATTC+GGG | + | chr5.4:20002765-20002784 | None:intergenic | 45.0% | |
AATTCTGGCCAGGTTTGAAG+AGG | + | chr5.4:20005637-20005656 | None:intergenic | 45.0% | |
ACACTGAACAAGACAAGGAC+AGG | + | chr5.4:20003296-20003315 | None:intergenic | 45.0% | |
ACGCCTTCCATCAGAAATGT+CGG | + | chr5.4:20003182-20003201 | None:intergenic | 45.0% | |
ACTCAATTTGGTTGGGTGAC+TGG | - | chr5.4:20004791-20004810 | MS.gene027925:intron | 45.0% | |
ACTGATGAACTCTGTCCATG+CGG | + | chr5.4:20005977-20005996 | None:intergenic | 45.0% | |
ATTCTGGCCAGGTTTGAAGA+GGG | + | chr5.4:20005636-20005655 | None:intergenic | 45.0% | |
CAAAAGGTCCCTAGCGAATT+CGG | + | chr5.4:20002766-20002785 | None:intergenic | 45.0% | |
CAAATTTGGGCTTGAGGAAG+AGG | - | chr5.4:20006018-20006037 | MS.gene027925:intron | 45.0% | |
CACTGAACAAGACAAGGACA+GGG | + | chr5.4:20003295-20003314 | None:intergenic | 45.0% | |
CACTGACACTGAACAAGACA+AGG | + | chr5.4:20003301-20003320 | None:intergenic | 45.0% | |
CATGGACAGAGTTCATCAGT+AGG | - | chr5.4:20005977-20005996 | MS.gene027925:intron | 45.0% | |
CCATGGTCATACTCAACAAC+AGG | - | chr5.4:20005943-20005962 | MS.gene027925:intron | 45.0% | |
CCTCTTAAAAAAGGACAGCC+CGG | + | chr5.4:20005067-20005086 | None:intergenic | 45.0% | |
CCTGTTGTTGAGTATGACCA+TGG | + | chr5.4:20005946-20005965 | None:intergenic | 45.0% | |
CGAAATATCCAGAGGGAATG+AGG | - | chr5.4:20006957-20006976 | MS.gene027925:CDS | 45.0% | |
CTAGTTGCTGACAATGTAGG+AGG | + | chr5.4:20003699-20003718 | None:intergenic | 45.0% | |
CTGCTCTGTTAGTTGATCCA+GGG | + | chr5.4:20007022-20007041 | None:intergenic | 45.0% | |
GCTTGAAGAACTTCGGCAAA+AGG | + | chr5.4:20002782-20002801 | None:intergenic | 45.0% | |
GGATCAACTAACAGAGCAGA+TGG | - | chr5.4:20007023-20007042 | MS.gene027925:CDS | 45.0% | |
GTTCAGTGTCAGTGCTTCAT+AGG | - | chr5.4:20003307-20003326 | MS.gene027925:CDS | 45.0% | |
TACTTCACCATCCAGTGCAA+TGG | - | chr5.4:20006468-20006487 | MS.gene027925:intron | 45.0% | |
TCTGCAAACTCCAATTCCAG+AGG | - | chr5.4:20006915-20006934 | MS.gene027925:CDS | 45.0% | |
TCTGCTCTGTTAGTTGATCC+AGG | + | chr5.4:20007023-20007042 | None:intergenic | 45.0% | |
TGAGTAGACTGCACTGAAGA+TGG | + | chr5.4:20006547-20006566 | None:intergenic | 45.0% | |
TGCTCTGTTAGTTGATCCAG+GGG | + | chr5.4:20007021-20007040 | None:intergenic | 45.0% | |
TGGACAGAGTTCATCAGTAG+GGG | - | chr5.4:20005979-20005998 | MS.gene027925:intron | 45.0% | |
TTACACACTCAATTCTGGCC+AGG | + | chr5.4:20005647-20005666 | None:intergenic | 45.0% | |
TTATCCTCAGGCTCAGTTTC+TGG | - | chr5.4:20005494-20005513 | MS.gene027925:intron | 45.0% | |
TTATCCTCAGGCTCAGTTTG+TGG | - | chr5.4:20004722-20004741 | MS.gene027925:intron | 45.0% | |
TTCTCATGCAAGAGCTTGTG+AGG | - | chr5.4:20006068-20006087 | MS.gene027925:intron | 45.0% | |
! | ACAGTAGTAGCTCTACAAGC+TGG | - | chr5.4:20006491-20006510 | MS.gene027925:intron | 45.0% |
! | ATGTTGGCCTCAAAATCCTC+TGG | + | chr5.4:20006934-20006953 | None:intergenic | 45.0% |
! | CAACTGGGCTTTGATTCACA+AGG | + | chr5.4:20004444-20004463 | None:intergenic | 45.0% |
! | CCTCTAAAAAAAGGGTAGCC+CGG | + | chr5.4:20004399-20004418 | None:intergenic | 45.0% |
! | GTTTTGCTCAAAAACGGTGG+CGG | + | chr5.4:20002660-20002679 | None:intergenic | 45.0% |
! | TAGCTCTACAAGCTGGAACT+CGG | - | chr5.4:20006498-20006517 | MS.gene027925:intron | 45.0% |
!! | AAAGAAACCAGGGCTTTGGA+CGG | + | chr5.4:20006200-20006219 | None:intergenic | 45.0% |
!! | GCAAATGAGGGCTTTTTGAG+GGG | - | chr5.4:20005878-20005897 | MS.gene027925:intron | 45.0% |
!! | GCCTCAAAATCCTCTGGAAT+TGG | + | chr5.4:20006928-20006947 | None:intergenic | 45.0% |
!! | TTGTCCCAGCCATTTTCTGT+TGG | + | chr5.4:20006988-20007007 | None:intergenic | 45.0% |
ACAATGGTTCAGCGCCTTCA+AGG | - | chr5.4:20006130-20006149 | MS.gene027925:intron | 50.0% | |
ACTAAAGCTCCTGCAAACGC+AGG | + | chr5.4:20005041-20005060 | None:intergenic | 50.0% | |
AGCTCTACAAGCTGGAACTC+GGG | - | chr5.4:20006499-20006518 | MS.gene027925:intron | 50.0% | |
AGGACAGGGTACATCAACGA+TGG | + | chr5.4:20003281-20003300 | None:intergenic | 50.0% | |
AGTCGAAGAAAACCTGCCCA+TGG | - | chr5.4:20005926-20005945 | MS.gene027925:intron | 50.0% | |
AGTCGGCAAATTTGGGCTTG+AGG | - | chr5.4:20006012-20006031 | MS.gene027925:intron | 50.0% | |
ATGTCCACAAACTGAGCCTG+AGG | + | chr5.4:20004729-20004748 | None:intergenic | 50.0% | |
ATGTCCAGAAACTGAGCCTG+AGG | + | chr5.4:20005501-20005520 | None:intergenic | 50.0% | |
CAAATCAGCGTGTACGGCAA+AGG | + | chr5.4:20003500-20003519 | None:intergenic | 50.0% | |
CAGCAGCAACAAACCACTGA+CGG | - | chr5.4:20006097-20006116 | MS.gene027925:intron | 50.0% | |
CCAATGTCAACAGGGACTCA+AGG | - | chr5.4:20006571-20006590 | MS.gene027925:intron | 50.0% | |
CCACACCAAATCAGCGTGTA+CGG | + | chr5.4:20003506-20003525 | None:intergenic | 50.0% | |
CCTTCCATCAGAAATGTCGG+CGG | + | chr5.4:20003179-20003198 | None:intergenic | 50.0% | |
CCTTGAGTCCCTGTTGACAT+TGG | + | chr5.4:20006574-20006593 | None:intergenic | 50.0% | |
CTACTGTCCATTGCACTGGA+TGG | + | chr5.4:20006478-20006497 | None:intergenic | 50.0% | |
CTCGGGAGTAACTCTTCAAG+AGG | - | chr5.4:20006516-20006535 | MS.gene027925:intron | 50.0% | |
GAAGGTTGACCCAGATCGTT+GGG | - | chr5.4:20005850-20005869 | MS.gene027925:intron | 50.0% | |
GAGCAAAGAAACCAGGGCTT+TGG | + | chr5.4:20006204-20006223 | None:intergenic | 50.0% | |
GAGGTGCAGCCAACAGAAAA+TGG | - | chr5.4:20006976-20006995 | MS.gene027925:CDS | 50.0% | |
GCAACTAGATGGAGCAGAAG+AGG | - | chr5.4:20003711-20003730 | MS.gene027925:CDS | 50.0% | |
GCAGCCAACAGAAAATGGCT+GGG | - | chr5.4:20006981-20007000 | MS.gene027925:CDS | 50.0% | |
GCTACTACTGTCCATTGCAC+TGG | + | chr5.4:20006482-20006501 | None:intergenic | 50.0% | |
GCTGAACCATTGTTTGCAGC+TGG | + | chr5.4:20006123-20006142 | None:intergenic | 50.0% | |
GGACAATAATACTCAGCCCC+TGG | - | chr5.4:20007002-20007021 | MS.gene027925:CDS | 50.0% | |
GGGTTCAACCACCCAAATAC+CGG | - | chr5.4:20002605-20002624 | MS.gene027925:CDS | 50.0% | |
GTAGACTGCACTGAAGATGG+AGG | + | chr5.4:20006544-20006563 | None:intergenic | 50.0% | |
GTCGTTGCTCCATTCCTTGA+AGG | + | chr5.4:20006147-20006166 | None:intergenic | 50.0% | |
TGCAGCCAACAGAAAATGGC+TGG | - | chr5.4:20006980-20006999 | MS.gene027925:CDS | 50.0% | |
TGTGGTTATAAGGGGGAGAC+AGG | - | chr5.4:20003470-20003489 | MS.gene027925:CDS | 50.0% | |
TGTTGAGTATGACCATGGGC+AGG | + | chr5.4:20005941-20005960 | None:intergenic | 50.0% | |
TTCCTGAACACTCTTGGGTG+TGG | - | chr5.4:20005243-20005262 | MS.gene027925:intron | 50.0% | |
TTTGCAGATGCTGCAGCTTG+AGG | + | chr5.4:20006637-20006656 | None:intergenic | 50.0% | |
! | ATGCAGGAGCTTTAGTGCAC+CGG | - | chr5.4:20004377-20004396 | MS.gene027925:intron | 50.0% |
! | CTTTGCCGTACACGCTGATT+TGG | - | chr5.4:20003498-20003517 | MS.gene027925:CDS | 50.0% |
! | GGCACAATCTCTGGTACTGA+AGG | + | chr5.4:20006733-20006752 | None:intergenic | 50.0% |
! | GTAGGGGCATGTGTAGAAGT+CGG | - | chr5.4:20005995-20006014 | MS.gene027925:intron | 50.0% |
! | TTGCAGGAGCTTTAGTGCAC+CGG | - | chr5.4:20005045-20005064 | MS.gene027925:intron | 50.0% |
! | TTTCTGATGGAAGGCGTGTC+CGG | - | chr5.4:20003185-20003204 | MS.gene027925:CDS | 50.0% |
!! | AAATGTCGGCGGTGCTACAA+AGG | + | chr5.4:20003168-20003187 | None:intergenic | 50.0% |
!! | AATGTCGGCGGTGCTACAAA+GGG | + | chr5.4:20003167-20003186 | None:intergenic | 50.0% |
!! | TTCCACACCCAAGAGTGTTC+AGG | + | chr5.4:20005248-20005267 | None:intergenic | 50.0% |
!! | TTCGCGTTTAGCATCGGTGT+CGG | + | chr5.4:20002633-20002652 | None:intergenic | 50.0% |
!!! | CCGGGCTACCCTTTTTTTAG+AGG | - | chr5.4:20004396-20004415 | MS.gene027925:intron | 50.0% |
!!! | CCGGGCTGTCCTTTTTTAAG+AGG | - | chr5.4:20005064-20005083 | MS.gene027925:intron | 50.0% |
AGCACCGCCGACATTTCTGA+TGG | - | chr5.4:20003172-20003191 | MS.gene027925:CDS | 55.0% | |
ATGGCTCCCGAGACAGATGA+TGG | - | chr5.4:20006787-20006806 | MS.gene027925:intron | 55.0% | |
CACCGACACGTGTCAGATAC+CGG | + | chr5.4:20003207-20003226 | None:intergenic | 55.0% | |
CCGCCGACATTTCTGATGGA+AGG | - | chr5.4:20003176-20003195 | MS.gene027925:CDS | 55.0% | |
GGAAGGTTGACCCAGATCGT+TGG | - | chr5.4:20005849-20005868 | MS.gene027925:intron | 55.0% | |
GGCTTGAGGAAGAGGTTGAG+AGG | - | chr5.4:20006026-20006045 | MS.gene027925:intron | 55.0% | |
GGTTCAGCGCCTTCAAGGAA+TGG | - | chr5.4:20006135-20006154 | MS.gene027925:intron | 55.0% | |
GTCCGGTATCTGACACGTGT+CGG | - | chr5.4:20003202-20003221 | MS.gene027925:CDS | 55.0% | |
TGACGGCCAGCTGCAAACAA+TGG | - | chr5.4:20006114-20006133 | MS.gene027925:intron | 55.0% | |
TTCCACACCCAAGCGTGTTC+AGG | + | chr5.4:20004488-20004507 | None:intergenic | 55.0% | |
TTCCTGAACACGCTTGGGTG+TGG | - | chr5.4:20004483-20004502 | MS.gene027925:intron | 55.0% | |
! | AAAATGGTGGGACCCCTTCC+CGG | - | chr5.4:20005013-20005032 | MS.gene027925:intron | 55.0% |
! | TGCAGGAGCTTTAGTGCACC+GGG | - | chr5.4:20004378-20004397 | MS.gene027925:intron | 55.0% |
!! | CAAAAAGCGTCGGCTCAAGC+AGG | - | chr5.4:20006273-20006292 | MS.gene027925:intron | 55.0% |
!! | CCGTACACGCTGATTTGGTG+TGG | - | chr5.4:20003503-20003522 | MS.gene027925:CDS | 55.0% |
AGGTCCCTAGCGAATTCGGG+TGG | + | chr5.4:20002762-20002781 | None:intergenic | 60.0% | |
CAAACGCAGGATCCGGGAAG+GGG | + | chr5.4:20005028-20005047 | None:intergenic | 60.0% | |
CAACAGGCTCAGCAACCGCA+TGG | - | chr5.4:20005959-20005978 | MS.gene027925:intron | 60.0% | |
CTCCTGCAAACGCAGGATCC+GGG | + | chr5.4:20005034-20005053 | None:intergenic | 60.0% | |
GAGCAAGCTACCCCTCCTGA+TGG | - | chr5.4:20006316-20006335 | MS.gene027925:intron | 60.0% | |
GCAAACGCAGGATCCGGGAA+GGG | + | chr5.4:20005029-20005048 | None:intergenic | 60.0% | |
GCTCCTGCAAACGCAGGATC+CGG | + | chr5.4:20005035-20005054 | None:intergenic | 60.0% | |
GGACCCACCCGAATTCGCTA+GGG | - | chr5.4:20002755-20002774 | MS.gene027925:CDS | 60.0% | |
GGCGCGTTCGCGTTTAGCAT+CGG | + | chr5.4:20002639-20002658 | None:intergenic | 60.0% | |
GGTCCCTAGCGAATTCGGGT+GGG | + | chr5.4:20002761-20002780 | None:intergenic | 60.0% | |
TGCAAACGCAGGATCCGGGA+AGG | + | chr5.4:20005030-20005049 | None:intergenic | 60.0% | |
TGGCTGCACCTCATTCCCTC+TGG | + | chr5.4:20006968-20006987 | None:intergenic | 60.0% | |
TGTTTGCAGCTGGCCGTCAG+TGG | + | chr5.4:20006113-20006132 | None:intergenic | 60.0% | |
TTCCCGGATCCTGCGTTTGC+AGG | - | chr5.4:20005029-20005048 | MS.gene027925:intron | 60.0% | |
! | GGGAAGGGGTCCCACCATTT+TGG | + | chr5.4:20005014-20005033 | None:intergenic | 60.0% |
!! | AAGCGTCGGCTCAAGCAGGA+TGG | - | chr5.4:20006277-20006296 | MS.gene027925:intron | 60.0% |
!! | ACCAGGGCTTTGGACGGCTT+TGG | + | chr5.4:20006194-20006213 | None:intergenic | 60.0% |
!! | GGCTTTGGACGGCTTTGGCA+AGG | + | chr5.4:20006189-20006208 | None:intergenic | 60.0% |
!! | TTTAGCATCGGTGTCGGCGC+CGG | + | chr5.4:20002627-20002646 | None:intergenic | 60.0% |
GATGGAGCAAGCGGCGGAAG+TGG | - | chr5.4:20002573-20002592 | MS.gene027925:CDS | 65.0% | |
GCCAAAGCCGTCCAAAGCCC+TGG | - | chr5.4:20006190-20006209 | MS.gene027925:intron | 65.0% | |
GGGACCCACCCGAATTCGCT+AGG | - | chr5.4:20002754-20002773 | MS.gene027925:CDS | 65.0% | |
!! | CGGTGTCGGCGCCGGTATTT+GGG | + | chr5.4:20002619-20002638 | None:intergenic | 65.0% |
!! | TCGGTGTCGGCGCCGGTATT+TGG | + | chr5.4:20002620-20002639 | None:intergenic | 65.0% |
!! | TGTCGGCGCCGGTATTTGGG+TGG | + | chr5.4:20002616-20002635 | None:intergenic | 65.0% |
GGAGCAAGCGGCGGAAGTGG+CGG | - | chr5.4:20002576-20002595 | MS.gene027925:CDS | 70.0% | |
GCAAGCGGCGGAAGTGGCGG+CGG | - | chr5.4:20002579-20002598 | MS.gene027925:CDS | 75.0% | |
GGCGGAAGTGGCGGCGGAGA+GGG | - | chr5.4:20002585-20002604 | MS.gene027925:CDS | 75.0% | |
! | CGGCGGAAGTGGCGGCGGAG+AGG | - | chr5.4:20002584-20002603 | MS.gene027925:CDS | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 20002570 | 20007077 | 20002570 | ID=MS.gene027925 |
chr5.4 | mRNA | 20002570 | 20007077 | 20002570 | ID=MS.gene027925.t1;Parent=MS.gene027925 |
chr5.4 | exon | 20006826 | 20007077 | 20006826 | ID=MS.gene027925.t1.exon1;Parent=MS.gene027925.t1 |
chr5.4 | CDS | 20006826 | 20007077 | 20006826 | ID=cds.MS.gene027925.t1;Parent=MS.gene027925.t1 |
chr5.4 | exon | 20002570 | 20003805 | 20002570 | ID=MS.gene027925.t1.exon2;Parent=MS.gene027925.t1 |
chr5.4 | CDS | 20002570 | 20003805 | 20002570 | ID=cds.MS.gene027925.t1;Parent=MS.gene027925.t1 |
Gene Sequence |
Protein sequence |