Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02795.t1 | XP_024631614.1 | 91 | 611 | 39 | 2 | 24 | 634 | 35 | 629 | 0.00E+00 | 1143.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02795.t1 | Q9SSQ4 | 64.4 | 587 | 200 | 5 | 44 | 627 | 59 | 639 | 1.5e-227 | 790.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02795.t1 | A0A396J867 | 91.0 | 611 | 39 | 2 | 24 | 634 | 35 | 629 | 0.0e+00 | 1143.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene02795.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02795.t1 | MTR_6g051425 | 29.967 | 307 | 185 | 7 | 71 | 348 | 19 | 324 | 2.44e-33 | 131 |
| MS.gene02795.t1 | MTR_1g070355 | 27.426 | 237 | 158 | 7 | 74 | 299 | 79 | 312 | 1.54e-15 | 80.5 |
| MS.gene02795.t1 | MTR_4g067290 | 40.196 | 102 | 56 | 2 | 69 | 166 | 56 | 156 | 3.05e-14 | 73.2 |
| MS.gene02795.t1 | MTR_4g067290 | 40.196 | 102 | 56 | 2 | 69 | 166 | 56 | 156 | 3.18e-14 | 73.2 |
| MS.gene02795.t1 | MTR_4g067290 | 40.196 | 102 | 56 | 2 | 69 | 166 | 76 | 176 | 4.03e-14 | 73.2 |
| MS.gene02795.t1 | MTR_4g067290 | 40.196 | 102 | 56 | 2 | 69 | 166 | 76 | 176 | 4.08e-14 | 73.2 |
| MS.gene02795.t1 | MTR_4g067290 | 40.196 | 102 | 56 | 2 | 69 | 166 | 74 | 174 | 4.09e-14 | 73.2 |
| MS.gene02795.t1 | MTR_4g067290 | 40.196 | 102 | 56 | 2 | 69 | 166 | 116 | 216 | 6.07e-14 | 73.6 |
| MS.gene02795.t1 | MTR_2g098880 | 33.962 | 106 | 64 | 1 | 67 | 166 | 59 | 164 | 3.41e-13 | 70.5 |
| MS.gene02795.t1 | MTR_2g098880 | 33.962 | 106 | 64 | 1 | 67 | 166 | 71 | 176 | 4.32e-13 | 70.5 |
| MS.gene02795.t1 | MTR_2g098920 | 38.235 | 102 | 58 | 2 | 69 | 166 | 80 | 180 | 2.18e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02795.t1 | AT1G52520 | 62.340 | 624 | 220 | 9 | 12 | 628 | 25 | 640 | 0.0 | 805 |
| MS.gene02795.t1 | AT1G80010 | 46.812 | 596 | 294 | 10 | 52 | 630 | 76 | 665 | 0.0 | 541 |
| MS.gene02795.t1 | AT3G22170 | 34.016 | 635 | 357 | 10 | 10 | 626 | 28 | 618 | 1.17e-116 | 368 |
| MS.gene02795.t1 | AT3G22170 | 34.016 | 635 | 357 | 10 | 10 | 626 | 28 | 618 | 1.17e-116 | 368 |
| MS.gene02795.t1 | AT4G15090 | 34.171 | 597 | 370 | 8 | 48 | 632 | 30 | 615 | 2.56e-116 | 367 |
| MS.gene02795.t1 | AT4G15090 | 34.171 | 597 | 370 | 8 | 48 | 632 | 30 | 615 | 2.56e-116 | 367 |
| MS.gene02795.t1 | AT4G15090 | 34.171 | 597 | 370 | 8 | 48 | 632 | 30 | 615 | 2.56e-116 | 367 |
| MS.gene02795.t1 | AT4G15090 | 34.171 | 597 | 370 | 8 | 48 | 632 | 30 | 615 | 2.56e-116 | 367 |
| MS.gene02795.t1 | AT4G15090 | 34.171 | 597 | 370 | 8 | 48 | 632 | 30 | 615 | 2.56e-116 | 367 |
| MS.gene02795.t1 | AT1G76320 | 36.092 | 568 | 317 | 11 | 73 | 622 | 1 | 540 | 3.08e-107 | 338 |
| MS.gene02795.t1 | AT1G76320 | 35.979 | 567 | 317 | 10 | 73 | 621 | 1 | 539 | 1.10e-106 | 339 |
| MS.gene02795.t1 | AT1G76320 | 35.979 | 567 | 317 | 10 | 73 | 621 | 1 | 539 | 1.10e-106 | 339 |
| MS.gene02795.t1 | AT1G76320 | 35.979 | 567 | 317 | 10 | 73 | 621 | 1 | 539 | 1.17e-106 | 338 |
| MS.gene02795.t1 | AT4G19990 | 34.256 | 578 | 315 | 10 | 72 | 626 | 24 | 559 | 4.33e-96 | 311 |
| MS.gene02795.t1 | AT4G19990 | 34.256 | 578 | 315 | 10 | 72 | 626 | 24 | 559 | 4.33e-96 | 311 |
| MS.gene02795.t1 | AT4G19990 | 34.256 | 578 | 315 | 10 | 72 | 626 | 24 | 559 | 5.34e-96 | 311 |
| MS.gene02795.t1 | AT4G19990 | 34.256 | 578 | 315 | 10 | 72 | 626 | 38 | 573 | 8.43e-96 | 311 |
| MS.gene02795.t1 | AT4G19990 | 34.256 | 578 | 315 | 10 | 72 | 626 | 24 | 559 | 1.14e-95 | 311 |
| MS.gene02795.t1 | AT4G19990 | 34.256 | 578 | 315 | 10 | 72 | 626 | 24 | 559 | 1.14e-95 | 311 |
| MS.gene02795.t1 | AT4G38180 | 31.889 | 577 | 371 | 11 | 67 | 630 | 71 | 638 | 2.97e-93 | 305 |
| MS.gene02795.t1 | AT4G19990 | 35.200 | 500 | 278 | 7 | 132 | 626 | 44 | 502 | 1.46e-89 | 293 |
| MS.gene02795.t1 | AT3G06250 | 30.648 | 571 | 351 | 10 | 55 | 624 | 176 | 702 | 1.07e-87 | 290 |
| MS.gene02795.t1 | AT3G06250 | 32.710 | 107 | 63 | 1 | 67 | 173 | 26 | 123 | 1.43e-12 | 71.2 |
| MS.gene02795.t1 | AT3G06250 | 30.648 | 571 | 351 | 10 | 55 | 624 | 176 | 702 | 1.07e-87 | 290 |
| MS.gene02795.t1 | AT3G06250 | 32.710 | 107 | 63 | 1 | 67 | 173 | 26 | 123 | 1.43e-12 | 71.2 |
| MS.gene02795.t1 | AT3G06250 | 30.648 | 571 | 351 | 10 | 55 | 624 | 176 | 702 | 1.07e-87 | 290 |
| MS.gene02795.t1 | AT3G06250 | 32.710 | 107 | 63 | 1 | 67 | 173 | 26 | 123 | 1.43e-12 | 71.2 |
| MS.gene02795.t1 | AT2G27110 | 30.156 | 577 | 361 | 13 | 55 | 626 | 40 | 579 | 1.08e-86 | 289 |
| MS.gene02795.t1 | AT2G27110 | 30.156 | 577 | 361 | 13 | 55 | 626 | 40 | 579 | 1.08e-86 | 289 |
| MS.gene02795.t1 | AT5G18960 | 31.239 | 557 | 341 | 12 | 69 | 624 | 211 | 726 | 3.68e-85 | 283 |
| MS.gene02795.t1 | AT5G18960 | 31.239 | 557 | 341 | 12 | 69 | 624 | 211 | 726 | 3.68e-85 | 283 |
| MS.gene02795.t1 | AT2G27110 | 32.374 | 417 | 272 | 5 | 211 | 626 | 27 | 434 | 7.52e-79 | 265 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 180 | 550 | 1.36e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 139 | 509 | 1.57e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 139 | 509 | 2.01e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 180 | 550 | 2.60e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 180 | 550 | 2.60e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 180 | 550 | 2.65e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 180 | 550 | 2.65e-73 | 251 |
| MS.gene02795.t1 | AT2G32250 | 35.789 | 380 | 233 | 5 | 246 | 623 | 180 | 550 | 2.65e-73 | 251 |
| MS.gene02795.t1 | AT4G38170 | 32.051 | 390 | 252 | 6 | 239 | 626 | 21 | 399 | 6.04e-68 | 231 |
| MS.gene02795.t1 | AT1G10240 | 25.913 | 575 | 388 | 14 | 69 | 623 | 48 | 604 | 3.05e-52 | 191 |
| MS.gene02795.t1 | AT1G10240 | 25.913 | 575 | 388 | 14 | 69 | 623 | 48 | 604 | 3.05e-52 | 191 |
| MS.gene02795.t1 | AT5G28530 | 24.621 | 593 | 404 | 14 | 68 | 634 | 54 | 629 | 4.86e-39 | 153 |
| MS.gene02795.t1 | AT5G28530 | 24.747 | 594 | 398 | 15 | 68 | 634 | 54 | 625 | 1.05e-38 | 152 |
| MS.gene02795.t1 | AT5G28530 | 24.747 | 594 | 398 | 15 | 68 | 634 | 54 | 625 | 1.05e-38 | 152 |
| MS.gene02795.t1 | AT5G28530 | 23.408 | 581 | 363 | 16 | 68 | 634 | 54 | 566 | 3.17e-28 | 120 |
| MS.gene02795.t1 | AT5G28530 | 23.540 | 582 | 357 | 17 | 68 | 634 | 54 | 562 | 4.54e-28 | 119 |
| MS.gene02795.t1 | AT3G59470 | 36.607 | 112 | 66 | 2 | 58 | 166 | 61 | 170 | 5.61e-14 | 72.8 |
| MS.gene02795.t1 | AT3G59470 | 36.607 | 112 | 66 | 2 | 58 | 166 | 61 | 170 | 5.61e-14 | 72.8 |
| MS.gene02795.t1 | AT3G59470 | 36.607 | 112 | 66 | 2 | 58 | 166 | 73 | 182 | 6.23e-14 | 72.8 |
Find 0 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAATAGAATCATATAAA+TGG | - | 15007:13689-13708 | MS.gene02795:intron | 10.0% |
| !! | AGTAATATAAAATTTCAAAT+TGG | - | 15007:12525-12544 | MS.gene02795:CDS | 10.0% |
| !!! | AAAAAGTATTTTTATACATA+TGG | + | 15007:12655-12674 | None:intergenic | 10.0% |
| !! | AAAATACAATATTCAAAACT+TGG | + | 15007:11887-11906 | None:intergenic | 15.0% |
| !!! | ATTGTTTTATTAGTTTCTAT+TGG | - | 15007:12623-12642 | MS.gene02795:CDS | 15.0% |
| !!! | CTTTTTTTTTTTTTGAAGAA+TGG | - | 15007:12316-12335 | MS.gene02795:CDS | 15.0% |
| !!! | TGAAATTTTATATTACTGAT+TGG | + | 15007:12522-12541 | None:intergenic | 15.0% |
| !! | AATGTTAAAAATAAAAGGGA+AGG | - | 15007:12173-12192 | MS.gene02795:CDS | 20.0% |
| !! | ACATAAATCCATTAAAAAGA+TGG | - | 15007:13228-13247 | MS.gene02795:CDS | 20.0% |
| !! | CATAAATCCATTAAAAAGAT+GGG | - | 15007:13229-13248 | MS.gene02795:CDS | 20.0% |
| !! | GGTCAATGTTAAAAATAAAA+GGG | - | 15007:12169-12188 | MS.gene02795:CDS | 20.0% |
| !! | GTTCAACTTATTAGAATATT+TGG | + | 15007:13389-13408 | None:intergenic | 20.0% |
| !! | TGGTCAATGTTAAAAATAAA+AGG | - | 15007:12168-12187 | MS.gene02795:CDS | 20.0% |
| !!! | ATTTTTATGGATATCTTTGT+CGG | - | 15007:14490-14509 | MS.gene02795:intron | 20.0% |
| !!! | GTTCAATATTGTTTTATTAG+AGG | - | 15007:12733-12752 | MS.gene02795:CDS | 20.0% |
| !!! | TGTGTTTACTCAATTTTATT+GGG | - | 15007:14520-14539 | MS.gene02795:intron | 20.0% |
| !!! | TGTTGTTGCTTTAATTTTTA+TGG | - | 15007:14477-14496 | MS.gene02795:intron | 20.0% |
| !!! | TTGAGACTATTTTGTATTTT+CGG | - | 15007:12016-12035 | MS.gene02795:CDS | 20.0% |
| !!! | TTGTGTTTACTCAATTTTAT+TGG | - | 15007:14519-14538 | MS.gene02795:intron | 20.0% |
| !!! | TTTTTGAAGAATGGTTATTT+TGG | - | 15007:12325-12344 | MS.gene02795:CDS | 20.0% |
| ! | AAAAACTATGTTGTTAATCG+TGG | + | 15007:11734-11753 | None:intergenic | 25.0% |
| ! | AGTGACAAGTCTTTATAATT+TGG | + | 15007:11567-11586 | None:intergenic | 25.0% |
| ! | CGAAATAGCAAAGAAAAATA+CGG | - | 15007:13031-13050 | MS.gene02795:CDS | 25.0% |
| ! | CTATCTGTAATAATAGTTTG+AGG | + | 15007:13754-13773 | None:intergenic | 25.0% |
| ! | TAGAGGAATAAGTTATAACA+TGG | - | 15007:11858-11877 | MS.gene02795:CDS | 25.0% |
| ! | TCCATCAAATAAAAGAAGTT+TGG | + | 15007:13472-13491 | None:intergenic | 25.0% |
| ! | TGGACATATTTATCGAAAAA+AGG | + | 15007:14108-14127 | None:intergenic | 25.0% |
| ! | TTATCTTGACAACACTTATT+TGG | - | 15007:13576-13595 | MS.gene02795:intron | 25.0% |
| ! | TTGGATATTCATCATGATTT+GGG | - | 15007:12411-12430 | MS.gene02795:CDS | 25.0% |
| ! | TTTGGATATTCATCATGATT+TGG | - | 15007:12410-12429 | MS.gene02795:CDS | 25.0% |
| !! | AAGTCATTATTGAACTGTTT+TGG | - | 15007:12392-12411 | MS.gene02795:CDS | 25.0% |
| !! | AATAAGTTGAACCTAAGAAA+AGG | - | 15007:13397-13416 | MS.gene02795:intron | 25.0% |
| !! | ACTAATTCACATGGTTATTT+TGG | - | 15007:12292-12311 | MS.gene02795:CDS | 25.0% |
| !! | ATAAATGGTTGTTTAGAACA+TGG | - | 15007:13704-13723 | MS.gene02795:intron | 25.0% |
| !! | GTGTTTACTCAATTTTATTG+GGG | - | 15007:14521-14540 | MS.gene02795:intron | 25.0% |
| !!! | AAAAAAGTACCAGAAAAACT+GGG | - | 15007:13850-13869 | MS.gene02795:intron | 25.0% |
| !!! | AAGAAATGTTCTCTTGTTTT+GGG | - | 15007:14319-14338 | MS.gene02795:intron | 25.0% |
| !!! | AATTTCTGTCACTTTTACTA+AGG | - | 15007:12237-12256 | MS.gene02795:CDS | 25.0% |
| !!! | GTTGTTTTAATGTGTGTTAA+TGG | - | 15007:11653-11672 | MS.gene02795:CDS | 25.0% |
| !!! | TCCAAACTTCTTTTATTTGA+TGG | - | 15007:13468-13487 | MS.gene02795:intron | 25.0% |
| ACTTGTGTGAAAGATATAGT+TGG | - | 15007:12440-12459 | MS.gene02795:CDS | 30.0% | |
| ATAGTCATAACGAAAGAATC+TGG | + | 15007:11810-11829 | None:intergenic | 30.0% | |
| ATGACAATGACTAATTCACA+TGG | - | 15007:12283-12302 | MS.gene02795:CDS | 30.0% | |
| CACTAACTTAATCCTTATCA+TGG | + | 15007:13143-13162 | None:intergenic | 30.0% | |
| CATGATAAGGATTAAGTTAG+TGG | - | 15007:13141-13160 | MS.gene02795:CDS | 30.0% | |
| GCATTTAAGGAATGCATTAT+GGG | - | 15007:13507-13526 | MS.gene02795:intron | 30.0% | |
| TAGTCATAACGAAAGAATCT+GGG | + | 15007:11809-11828 | None:intergenic | 30.0% | |
| TGCTGCGAATAATTAATACA+TGG | - | 15007:12593-12612 | MS.gene02795:CDS | 30.0% | |
| TGGATATTCATCATGATTTG+GGG | - | 15007:12412-12431 | MS.gene02795:CDS | 30.0% | |
| TTAGTTGGAATAAATCACCA+TGG | - | 15007:13628-13647 | MS.gene02795:intron | 30.0% | |
| TTGTTTGACAATATGCTAGA+TGG | - | 15007:12769-12788 | MS.gene02795:CDS | 30.0% | |
| ! | GACTTTGTTTATTGAGCATT+CGG | - | 15007:12347-12366 | MS.gene02795:CDS | 30.0% |
| ! | GGATTCATGATTCAATGTTT+TGG | - | 15007:13961-13980 | MS.gene02795:intron | 30.0% |
| ! | TTGGAGTTAATGATAATGAG+TGG | - | 15007:13980-13999 | MS.gene02795:intron | 30.0% |
| ! | TTTACTCAATTTTATTGGGG+TGG | - | 15007:14524-14543 | MS.gene02795:intron | 30.0% |
| !! | AGAAATTAGAAGTGTTAGTC+AGG | + | 15007:12224-12243 | None:intergenic | 30.0% |
| !! | CCATTGTTTTTCTCAAAACA+TGG | + | 15007:12065-12084 | None:intergenic | 30.0% |
| !! | GAAAAAAGTACCAGAAAAAC+TGG | - | 15007:13849-13868 | MS.gene02795:intron | 30.0% |
| !! | GAAGAAATGTTCTCTTGTTT+TGG | - | 15007:14318-14337 | MS.gene02795:intron | 30.0% |
| !! | TGATGGATTTCAATGATGAA+GGG | - | 15007:13485-13504 | MS.gene02795:intron | 30.0% |
| !! | TTATATTTGCTATGCCAAAG+AGG | - | 15007:12970-12989 | MS.gene02795:CDS | 30.0% |
| !! | TTGATGGATTTCAATGATGA+AGG | - | 15007:13484-13503 | MS.gene02795:intron | 30.0% |
| !! | TTGGATTAGTCAATTGCATA+CGG | + | 15007:13453-13472 | None:intergenic | 30.0% |
| !!! | AGCATTTGGTTTTTAGCAAA+GGG | + | 15007:14233-14252 | None:intergenic | 30.0% |
| !!! | CCATGTTTTGAGAAAAACAA+TGG | - | 15007:12062-12081 | MS.gene02795:CDS | 30.0% |
| AAACAATGGTGCAATGTCAT+TGG | - | 15007:12076-12095 | MS.gene02795:CDS | 35.0% | |
| AAATAAAAGGGAAGGATGCA+TGG | - | 15007:12181-12200 | MS.gene02795:CDS | 35.0% | |
| AACATTGACCACAAGACAAT+CGG | + | 15007:12159-12178 | None:intergenic | 35.0% | |
| AACTTAATCCTTATCATGGC+AGG | + | 15007:13139-13158 | None:intergenic | 35.0% | |
| AACTTGTCCTTCAGATATAC+CGG | + | 15007:14042-14061 | None:intergenic | 35.0% | |
| ACACATACGCAATGATTGTT+AGG | + | 15007:11633-11652 | None:intergenic | 35.0% | |
| ACATGGAACACATGTATATC+AGG | - | 15007:13721-13740 | MS.gene02795:intron | 35.0% | |
| ACATTTCTTCCACTTCAAGT+TGG | + | 15007:14308-14327 | None:intergenic | 35.0% | |
| ACGCAAATCATCACCAATTT+AGG | + | 15007:11939-11958 | None:intergenic | 35.0% | |
| ACGGCAGAGGAAATTATAAA+TGG | + | 15007:13434-13453 | None:intergenic | 35.0% | |
| AGTCATAACGAAAGAATCTG+GGG | + | 15007:11808-11827 | None:intergenic | 35.0% | |
| ATATTGTGAGAGAGAGGAAA+AGG | - | 15007:12491-12510 | MS.gene02795:CDS | 35.0% | |
| ATGTGTGTTAATGGCTATAG+CGG | - | 15007:11662-11681 | MS.gene02795:CDS | 35.0% | |
| ATTTCAATGCATTCTCCATC+CGG | + | 15007:12824-12843 | None:intergenic | 35.0% | |
| CAAATATGAAATCCCTCTTG+TGG | - | 15007:13603-13622 | MS.gene02795:intron | 35.0% | |
| CGTTTCAAACTATTATGTCG+TGG | - | 15007:11956-11975 | MS.gene02795:CDS | 35.0% | |
| CTAAAGCAATGATGAGATCT+GGG | + | 15007:13814-13833 | None:intergenic | 35.0% | |
| GAAATTCCAAGAGATGAAGA+TGG | - | 15007:12839-12858 | MS.gene02795:CDS | 35.0% | |
| GATAGTATATTGTGAGAGAG+AGG | - | 15007:12485-12504 | MS.gene02795:CDS | 35.0% | |
| GGCATTTAAGGAATGCATTA+TGG | - | 15007:13506-13525 | MS.gene02795:intron | 35.0% | |
| GTGTGAGGATTAAGAATTCA+TGG | - | 15007:13002-13021 | MS.gene02795:CDS | 35.0% | |
| GTTATGACTATCTGACTCTT+TGG | - | 15007:11819-11838 | MS.gene02795:CDS | 35.0% | |
| TACAAGTAGAATCAAGCATC+AGG | + | 15007:11996-12015 | None:intergenic | 35.0% | |
| TCCATTAAAAAGATGGGAAG+TGG | - | 15007:13235-13254 | MS.gene02795:CDS | 35.0% | |
| TCGGTTATCTATGTCCAAAA+GGG | - | 15007:12035-12054 | MS.gene02795:CDS | 35.0% | |
| TTCGGTTATCTATGTCCAAA+AGG | - | 15007:12034-12053 | MS.gene02795:CDS | 35.0% | |
| TTGAGAAAAGAAACCAGAAC+TGG | - | 15007:13109-13128 | MS.gene02795:CDS | 35.0% | |
| TTGTGCTGCAAATTTCAATG+AGG | - | 15007:12116-12135 | MS.gene02795:CDS | 35.0% | |
| ! | AGCTCTTTACAAGAAGTACA+AGG | - | 15007:14170-14189 | MS.gene02795:intron | 35.0% |
| ! | CAATCAGTGTTATTAGGTTG+TGG | - | 15007:13652-13671 | MS.gene02795:intron | 35.0% |
| ! | CATGGTCAATCAGTGTTATT+AGG | - | 15007:13646-13665 | MS.gene02795:intron | 35.0% |
| ! | CGATATTTCTGAGGGTAAAA+AGG | - | 15007:12889-12908 | MS.gene02795:CDS | 35.0% |
| ! | CTAATAACACTGATTGACCA+TGG | + | 15007:13648-13667 | None:intergenic | 35.0% |
| ! | TGTCAAGACGATATTTCTGA+GGG | - | 15007:12881-12900 | MS.gene02795:CDS | 35.0% |
| ! | TTGTCAAGACGATATTTCTG+AGG | - | 15007:12880-12899 | MS.gene02795:CDS | 35.0% |
| ! | TTTTGATCGAGGGAAACAAA+CGG | - | 15007:14397-14416 | MS.gene02795:intron | 35.0% |
| !! | ATGGGTTGATGCTAAATCTA+GGG | - | 15007:13525-13544 | MS.gene02795:intron | 35.0% |
| !! | GCAGTTTAGTTTGCCTAAAT+TGG | - | 15007:11923-11942 | MS.gene02795:CDS | 35.0% |
| !! | TATGGGTTGATGCTAAATCT+AGG | - | 15007:13524-13543 | MS.gene02795:intron | 35.0% |
| !! | TCAATGATGAAGGGCATTTA+AGG | - | 15007:13494-13513 | MS.gene02795:intron | 35.0% |
| !!! | GAGCATTTGGTTTTTAGCAA+AGG | + | 15007:14234-14253 | None:intergenic | 35.0% |
| !!! | GTCACTTTTACTAAGGTGTT+AGG | - | 15007:12244-12263 | MS.gene02795:CDS | 35.0% |
| AAGTACCAGAAAAACTGGGA+GGG | - | 15007:13854-13873 | MS.gene02795:intron | 40.0% | |
| ACAATGCAATTACACGTGGA+TGG | - | 15007:14342-14361 | MS.gene02795:intron | 40.0% | |
| ATTCCAACTAAAGCCACAAG+AGG | + | 15007:13619-13638 | None:intergenic | 40.0% | |
| ATTGAATTCGATGCAGCATG+GGG | - | 15007:13940-13959 | MS.gene02795:intron | 40.0% | |
| CACACAAAATCCAACCTCTT+TGG | + | 15007:12987-13006 | None:intergenic | 40.0% | |
| CATACGCAATGATTGTTAGG+TGG | + | 15007:11630-11649 | None:intergenic | 40.0% | |
| CCACAAACAGACTTCTTTGA+AGG | - | 15007:14125-14144 | MS.gene02795:intron | 40.0% | |
| CCTTCAAAGAAGTCTGTTTG+TGG | + | 15007:14128-14147 | None:intergenic | 40.0% | |
| CGGTTATCTATGTCCAAAAG+GGG | - | 15007:12036-12055 | MS.gene02795:CDS | 40.0% | |
| CTATTATTTCACCTGCAAGC+AGG | + | 15007:13678-13697 | None:intergenic | 40.0% | |
| CTCCTAAGTACATTCTTTCG+CGG | - | 15007:14556-14575 | MS.gene02795:intron | 40.0% | |
| CTCGAACATAACCACATCTT+AGG | - | 15007:13196-13215 | MS.gene02795:CDS | 40.0% | |
| GACTATCTGACTCTTTGGTT+GGG | - | 15007:11824-11843 | MS.gene02795:CDS | 40.0% | |
| GATTGAATTCGATGCAGCAT+GGG | - | 15007:13939-13958 | MS.gene02795:intron | 40.0% | |
| GCACTTGTGATAGATACAGA+AGG | - | 15007:13319-13338 | MS.gene02795:CDS | 40.0% | |
| GCTAAAGCAATGATGAGATC+TGG | + | 15007:13815-13834 | None:intergenic | 40.0% | |
| GGGAAACAAACGGGAAATTA+AGG | - | 15007:14407-14426 | MS.gene02795:intron | 40.0% | |
| GTATCTTAGCACCTAAGATG+TGG | + | 15007:13210-13229 | None:intergenic | 40.0% | |
| GTCATAACGAAAGAATCTGG+GGG | + | 15007:11807-11826 | None:intergenic | 40.0% | |
| TGACTATCTGACTCTTTGGT+TGG | - | 15007:11823-11842 | MS.gene02795:CDS | 40.0% | |
| TGATTCAAACTCCATTCCGA+CGG | + | 15007:12930-12949 | None:intergenic | 40.0% | |
| TGATTGAATTCGATGCAGCA+TGG | - | 15007:13938-13957 | MS.gene02795:intron | 40.0% | |
| TGCAGAGGGGAAAACAATTA+AGG | - | 15007:13288-13307 | MS.gene02795:CDS | 40.0% | |
| TGTGTGTTAATGGCTATAGC+GGG | - | 15007:11663-11682 | MS.gene02795:CDS | 40.0% | |
| TTACGAAGACCGAGTTCATT+GGG | - | 15007:14014-14033 | MS.gene02795:intron | 40.0% | |
| TTCCAACTAAAGCCACAAGA+GGG | + | 15007:13618-13637 | None:intergenic | 40.0% | |
| TTGACAACCTAGCTCAAAGA+TGG | + | 15007:12562-12581 | None:intergenic | 40.0% | |
| TTGTAGACCATCTTTGAGCT+AGG | - | 15007:12552-12571 | MS.gene02795:CDS | 40.0% | |
| TTTACGAAGACCGAGTTCAT+TGG | - | 15007:14013-14032 | MS.gene02795:intron | 40.0% | |
| TTTGATCGAGGGAAACAAAC+GGG | - | 15007:14398-14417 | MS.gene02795:intron | 40.0% | |
| TTTGCAGTTTGATGTCGCAT+TGG | - | 15007:11751-11770 | MS.gene02795:CDS | 40.0% | |
| ! | AAAGTACCAGAAAAACTGGG+AGG | - | 15007:13853-13872 | MS.gene02795:intron | 40.0% |
| ! | AAGAGGTTGGATTTTGTGTG+AGG | - | 15007:12987-13006 | MS.gene02795:CDS | 40.0% |
| ! | ACTCAATTTTATTGGGGTGG+AGG | - | 15007:14527-14546 | MS.gene02795:intron | 40.0% |
| ! | CTAAGGTGTTAGGATGTCAT+AGG | - | 15007:12254-12273 | MS.gene02795:CDS | 40.0% |
| ! | CTTGTGTGTCACCTTTTCTT+AGG | + | 15007:13411-13430 | None:intergenic | 40.0% |
| ! | GCCACTTCCCATCTTTTTAA+TGG | + | 15007:13239-13258 | None:intergenic | 40.0% |
| ! | TACAAGCGCTTTTGTATTCC+CGG | - | 15007:14591-14610 | MS.gene02795:CDS | 40.0% |
| !! | ATTTGCTATGCCAAAGAGGT+TGG | - | 15007:12974-12993 | MS.gene02795:CDS | 40.0% |
| !! | CTGCAGTTCAAAAGAGCATT+TGG | + | 15007:14247-14266 | None:intergenic | 40.0% |
| !! | TTCCACTTCAAGTTGGAACT+TGG | + | 15007:14301-14320 | None:intergenic | 40.0% |
| !!! | CTGAAGGACAAGTTTTTTGC+TGG | - | 15007:14048-14067 | MS.gene02795:intron | 40.0% |
| AGCTCTGTCATCTCTTGCAT+TGG | + | 15007:13362-13381 | None:intergenic | 45.0% | |
| AGTTAGTGGAGTCTCAGAGA+TGG | - | 15007:13155-13174 | MS.gene02795:CDS | 45.0% | |
| AGTTTGATGTCGCATTGGAC+TGG | - | 15007:11756-11775 | MS.gene02795:CDS | 45.0% | |
| ATCTGACTCTTTGGTTGGGA+GGG | - | 15007:11828-11847 | MS.gene02795:CDS | 45.0% | |
| CACCAAGTTCCAACTTGAAG+TGG | - | 15007:14296-14315 | MS.gene02795:intron | 45.0% | |
| CACCGCGAAAGAATGTACTT+AGG | + | 15007:14561-14580 | None:intergenic | 45.0% | |
| CGCGAAAGAATGTACTTAGG+AGG | + | 15007:14558-14577 | None:intergenic | 45.0% | |
| CTAAGTACATTCTTTCGCGG+TGG | - | 15007:14559-14578 | MS.gene02795:intron | 45.0% | |
| GTGTGTTAATGGCTATAGCG+GGG | - | 15007:11664-11683 | MS.gene02795:CDS | 45.0% | |
| TAGTCAATTGCATACGGCAG+AGG | + | 15007:13447-13466 | None:intergenic | 45.0% | |
| TATCACCGTCTTCTTGGTCA+AGG | - | 15007:14368-14387 | MS.gene02795:intron | 45.0% | |
| TATCTGACTCTTTGGTTGGG+AGG | - | 15007:11827-11846 | MS.gene02795:CDS | 45.0% | |
| TGACCAAGAAGACGGTGATA+GGG | + | 15007:14368-14387 | None:intergenic | 45.0% | |
| TGGGACAATGCAATTACACG+TGG | - | 15007:14338-14357 | MS.gene02795:intron | 45.0% | |
| TTGACCAAGAAGACGGTGAT+AGG | + | 15007:14369-14388 | None:intergenic | 45.0% | |
| TTGCTGGTATGTCTGCAACA+CGG | - | 15007:14064-14083 | MS.gene02795:intron | 45.0% | |
| ! | AGAGCACCATCTTCATCTCT+TGG | + | 15007:12848-12867 | None:intergenic | 45.0% |
| ! | CAAAACATGGAGACCCCTTT+TGG | + | 15007:12052-12071 | None:intergenic | 45.0% |
| ! | GAGCTCTAATCTCGATGTCA+CGG | - | 15007:11587-11606 | MS.gene02795:CDS | 45.0% |
| ! | GTGCTTTGTTGTAGCAGTCA+AGG | - | 15007:13058-13077 | MS.gene02795:CDS | 45.0% |
| !! | ATCCCTCTTGTGGCTTTAGT+TGG | - | 15007:13613-13632 | MS.gene02795:intron | 45.0% |
| !! | TTGCCTAGTTCTGATGCAGA+GGG | - | 15007:13274-13293 | MS.gene02795:CDS | 45.0% |
| ATACCGGTGCCCAATGAACT+CGG | + | 15007:14026-14045 | None:intergenic | 50.0% | |
| ATCTGGGGGCAAAAGGCAAA+AGG | + | 15007:11793-11812 | None:intergenic | 50.0% | |
| CGAAAGAATCTGGGGGCAAA+AGG | + | 15007:11800-11819 | None:intergenic | 50.0% | |
| CTGGTTGTCCTGCCATGATA+AGG | - | 15007:13128-13147 | MS.gene02795:CDS | 50.0% | |
| GTATGTCTGCAACACGGTCT+GGG | - | 15007:14070-14089 | MS.gene02795:intron | 50.0% | |
| GTTGGGAGGGAAGAGAATAG+AGG | - | 15007:11841-11860 | MS.gene02795:CDS | 50.0% | |
| TAGTGGAGTCTCAGAGATGG+AGG | - | 15007:13158-13177 | MS.gene02795:CDS | 50.0% | |
| TATGTCTGCAACACGGTCTG+GGG | - | 15007:14071-14090 | MS.gene02795:intron | 50.0% | |
| TCAGAGATGGAGGATATGCG+AGG | - | 15007:13168-13187 | MS.gene02795:CDS | 50.0% | |
| TTCCCCTCTGCATCAGAACT+AGG | + | 15007:13280-13299 | None:intergenic | 50.0% | |
| ! | TGCAACCCTCCCAGTTTTTC+TGG | + | 15007:13862-13881 | None:intergenic | 50.0% |
| !! | AAGGAGCGCGTTTTGATCGA+GGG | - | 15007:14387-14406 | MS.gene02795:intron | 50.0% |
| !! | GAAGTGCACCGATTGTCTTG+TGG | - | 15007:12148-12167 | MS.gene02795:CDS | 50.0% |
| !! | GAATTTGTTGCACCTGCCGT+CGG | - | 15007:12911-12930 | MS.gene02795:CDS | 50.0% |
| !! | GTTGCCTAGTTCTGATGCAG+AGG | - | 15007:13273-13292 | MS.gene02795:CDS | 50.0% |
| !! | TGCCTAGTTCTGATGCAGAG+GGG | - | 15007:13275-13294 | MS.gene02795:CDS | 50.0% |
| !! | TTGGGCACCGGTATATCTGA+AGG | - | 15007:14032-14051 | MS.gene02795:intron | 50.0% |
| ACCATGCAGCAAGCAATCGC+CGG | - | 15007:12802-12821 | MS.gene02795:CDS | 55.0% | |
| AGACCGAGTTCATTGGGCAC+CGG | - | 15007:14020-14039 | MS.gene02795:intron | 55.0% | |
| CATGGCAGGACAACCAGTTC+TGG | + | 15007:13125-13144 | None:intergenic | 55.0% | |
| GCGCTCCTTGACCAAGAAGA+CGG | + | 15007:14376-14395 | None:intergenic | 55.0% | |
| GGTATGTCTGCAACACGGTC+TGG | - | 15007:14069-14088 | MS.gene02795:intron | 55.0% | |
| TCAAACTCCATTCCGACGGC+AGG | + | 15007:12926-12945 | None:intergenic | 55.0% | |
| TGGCCCTATCACCGTCTTCT+TGG | - | 15007:14362-14381 | MS.gene02795:intron | 55.0% | |
| ! | TTAGGTTGTGGCCTGCTTGC+AGG | - | 15007:13664-13683 | MS.gene02795:intron | 55.0% |
| !! | CAAGGAGCGCGTTTTGATCG+AGG | - | 15007:14386-14405 | MS.gene02795:intron | 55.0% |
| TGCAGCAAGCAATCGCCGGA+TGG | - | 15007:12806-12825 | MS.gene02795:CDS | 60.0% | |
| TGTTGCACCTGCCGTCGGAA+TGG | - | 15007:12916-12935 | MS.gene02795:CDS | 60.0% | |
| ! | TCCGGCGATTGCTTGCTGCA+TGG | + | 15007:12806-12825 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 15007 | gene | 11540 | 14629 | 11540 | ID=MS.gene02795 |
| 15007 | mRNA | 11540 | 14629 | 11540 | ID=MS.gene02795.t1;Parent=MS.gene02795 |
| 15007 | exon | 14561 | 14629 | 14561 | ID=MS.gene02795.t1.exon1;Parent=MS.gene02795.t1 |
| 15007 | CDS | 14561 | 14629 | 14561 | ID=cds.MS.gene02795.t1;Parent=MS.gene02795.t1 |
| 15007 | exon | 11540 | 13381 | 11540 | ID=MS.gene02795.t1.exon2;Parent=MS.gene02795.t1 |
| 15007 | CDS | 11540 | 13381 | 11540 | ID=cds.MS.gene02795.t1;Parent=MS.gene02795.t1 |
| Gene Sequence |
| Protein sequence |
