Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028006.t1 | XP_003612709.1 | 98.4 | 496 | 7 | 1 | 1 | 495 | 1 | 496 | 2.30E-219 | 771.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028006.t1 | F4ICK8 | 62.2 | 505 | 176 | 9 | 1 | 494 | 1 | 501 | 8.2e-141 | 501.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028006.t1 | G7K9K8 | 98.4 | 496 | 7 | 1 | 1 | 495 | 1 | 496 | 1.7e-219 | 771.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene028006.t1 | TR | IWS1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028006.t1 | MTR_5g028030 | 98.589 | 496 | 6 | 1 | 1 | 495 | 1 | 496 | 0.0 | 978 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028006.t1 | AT1G32130 | 64.648 | 512 | 154 | 10 | 1 | 495 | 1 | 502 | 0.0 | 592 |
| MS.gene028006.t1 | AT1G32130 | 63.672 | 512 | 150 | 11 | 1 | 495 | 1 | 493 | 0.0 | 573 |
| MS.gene028006.t1 | AT4G19000 | 41.921 | 458 | 177 | 12 | 58 | 495 | 25 | 413 | 7.26e-90 | 281 |
Find 136 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAAGGATTTGGTTGATAAA+TGG | 0.185509 | 5.2:-19176212 | MS.gene028006:CDS |
| ATCCCTGCAGCTTTAGTTGC+TGG | 0.233171 | 5.2:+19175725 | None:intergenic |
| TAGTCAAACTTAAAAGTATT+TGG | 0.252291 | 5.2:+19174300 | None:intergenic |
| AGAAGGAGAAGAGGCTGAAA+GGG | 0.278023 | 5.2:-19178237 | MS.gene028006:CDS |
| AAAAGGAAGGAAGGTGGGTC+TGG | 0.285737 | 5.2:-19178262 | MS.gene028006:CDS |
| AAATCCAAAGGTGTGGCTTC+TGG | 0.295709 | 5.2:+19175534 | None:intergenic |
| ATGAAGAAATCAATGTAAAT+AGG | 0.314425 | 5.2:-19176242 | MS.gene028006:CDS |
| GGAAAGGGTGGGTCTAAATT+TGG | 0.328323 | 5.2:-19178202 | MS.gene028006:CDS |
| GCTGTCCGTATGTTGATATT+TGG | 0.349835 | 5.2:+19176575 | None:intergenic |
| TAGGAGATTAGCCAAGGATT+TGG | 0.358266 | 5.2:-19176223 | MS.gene028006:CDS |
| GCTCGTGCTCTGATTTCATC+GGG | 0.361338 | 5.2:+19175483 | None:intergenic |
| GGTCCGGAGAGTCGTCTTCC+AGG | 0.365768 | 5.2:-19175572 | MS.gene028006:CDS |
| CAAGGATTTGGTTGATAAAT+GGG | 0.367845 | 5.2:-19176211 | MS.gene028006:intron |
| GGAAGGTGGGTCTGGGAAGA+AGG | 0.369572 | 5.2:-19178254 | MS.gene028006:CDS |
| AAGAGACGGTGATCTTGATT+TGG | 0.370436 | 5.2:-19175696 | MS.gene028006:CDS |
| TAATGAAGGTGCCAGGAATA+TGG | 0.373132 | 5.2:-19177344 | MS.gene028006:CDS |
| GACGAATCGTTGTCGTAAAC+CGG | 0.375541 | 5.2:+19178403 | None:intergenic |
| ATCATCTTCCTCACCTTCCT+CGG | 0.381229 | 5.2:+19176970 | None:intergenic |
| AAGGGAGGAAGCGGAAGAAA+AGG | 0.382617 | 5.2:-19178279 | MS.gene028006:CDS |
| AAAGGAAGGAAGGTGGGTCT+GGG | 0.392644 | 5.2:-19178261 | MS.gene028006:CDS |
| AATGGCGCTGCCACCGGAGC+TGG | 0.393163 | 5.2:-19178326 | MS.gene028006:CDS |
| ACCGGAGCTGGAAGATGAAT+TGG | 0.398311 | 5.2:-19178314 | MS.gene028006:CDS |
| TGCTCGTGCTCTGATTTCAT+CGG | 0.401921 | 5.2:+19175482 | None:intergenic |
| TCATAATGCTCTAGATCTAT+AGG | 0.403177 | 5.2:+19176438 | None:intergenic |
| TGGCCTTGATGCATGTTGCC+TGG | 0.404163 | 5.2:+19175554 | None:intergenic |
| GAGATGTGGGATGCACTTGC+TGG | 0.404558 | 5.2:-19178121 | MS.gene028006:CDS |
| AAGAGGATGCTGAGCTTAAT+CGG | 0.405962 | 5.2:-19176835 | MS.gene028006:CDS |
| TGCGAAATACTGAGGATGAT+AGG | 0.410044 | 5.2:-19175875 | MS.gene028006:CDS |
| GTTATCATCATCCATATTCC+TGG | 0.415889 | 5.2:+19177333 | None:intergenic |
| AGAGGGGTTGGTGGGAAAAG+TGG | 0.424017 | 5.2:-19178169 | MS.gene028006:CDS |
| AAGGCCAGAAGCCACACCTT+TGG | 0.425652 | 5.2:-19175538 | MS.gene028006:CDS |
| AGGAAGATGAAGGGAGGAAG+CGG | 0.427861 | 5.2:-19178288 | MS.gene028006:CDS |
| AGGATGATAGGGTTCCTTAC+AGG | 0.430195 | 5.2:-19175863 | MS.gene028006:CDS |
| AAGAAGGAGAAGAGGCTGAA+AGG | 0.431465 | 5.2:-19178238 | MS.gene028006:CDS |
| CGTAAACCGGTGTCTGTGAC+CGG | 0.433384 | 5.2:+19178416 | None:intergenic |
| CCATTTATCAACCAAATCCT+TGG | 0.433652 | 5.2:+19176212 | None:intergenic |
| GGTGGTTCTAAGAGAGGGGT+TGG | 0.434042 | 5.2:-19178181 | MS.gene028006:CDS |
| TTCTTAATCAAGCGTTTCCT+CGG | 0.434552 | 5.2:+19178370 | None:intergenic |
| TGCTAAATTTATTGAAGAGT+TGG | 0.438820 | 5.2:-19176625 | MS.gene028006:CDS |
| GGAGTAGAACCTGCTTTGTA+TGG | 0.441599 | 5.2:-19177295 | MS.gene028006:CDS |
| TTAACCGATGGCCTCCTGTA+AGG | 0.442423 | 5.2:+19175849 | None:intergenic |
| TACGATGAACCGCGTTCTCC+TGG | 0.446496 | 5.2:-19177271 | MS.gene028006:CDS |
| CAGCTGAAGAGAAGTGGTCT+TGG | 0.447062 | 5.2:-19176405 | MS.gene028006:CDS |
| TTTATTAGTTGAGAATGTTA+TGG | 0.452902 | 5.2:-19176879 | MS.gene028006:CDS |
| GGTAGTAGTAGTGGAAAGGG+TGG | 0.455568 | 5.2:-19178214 | MS.gene028006:CDS |
| TTCTCCTGGCGATGCTCCAC+AGG | 0.459789 | 5.2:-19177257 | MS.gene028006:intron |
| ATTTACATTGATTTCTTCAT+CGG | 0.467117 | 5.2:+19176245 | None:intergenic |
| GAGGGGTTGGTGGGAAAAGT+GGG | 0.469594 | 5.2:-19178168 | MS.gene028006:CDS |
| TCCAATTCATCTTCCAGCTC+CGG | 0.470206 | 5.2:+19178313 | None:intergenic |
| TGAAGACGGTGAACCGTTGA+TGG | 0.474457 | 5.2:-19178536 | MS.gene028006:CDS |
| TAAGAAATTGCAGCAGTTGA+GGG | 0.478322 | 5.2:-19174380 | MS.gene028006:CDS |
| TCGAAATCGTCGAGTTGTTG+TGG | 0.481542 | 5.2:+19178472 | None:intergenic |
| CGAGTACTCTTGTTAAATAT+AGG | 0.484882 | 5.2:+19175909 | None:intergenic |
| ACTAATAAAGCAATTTCTGC+AGG | 0.487697 | 5.2:+19176893 | None:intergenic |
| AAGCGGAAGAAAAGGAAGGA+AGG | 0.488129 | 5.2:-19178271 | MS.gene028006:CDS |
| TCGTCGAGTTGTTGTGGCTC+CGG | 0.492659 | 5.2:+19178478 | None:intergenic |
| TTCTTGAGTTTATTGACTGC+GGG | 0.495936 | 5.2:+19176803 | None:intergenic |
| AGGCCAGCAACTAAAGCTGC+AGG | 0.496201 | 5.2:-19175728 | MS.gene028006:CDS |
| GAAGGAGAAGAGGCTGAAAG+GGG | 0.497568 | 5.2:-19178236 | MS.gene028006:CDS |
| GAGGAAGCGGAAGAAAAGGA+AGG | 0.502072 | 5.2:-19178275 | MS.gene028006:CDS |
| TGAGGAAGATGATGAAATCA+AGG | 0.503820 | 5.2:-19176960 | MS.gene028006:CDS |
| GGTTCTAAGAGAGGGGTTGG+TGG | 0.507545 | 5.2:-19178178 | MS.gene028006:CDS |
| GTTCTAAGAGAGGGGTTGGT+GGG | 0.509279 | 5.2:-19178177 | MS.gene028006:CDS |
| TTGTAATGCAGGCCTAGGTC+CGG | 0.510730 | 5.2:-19175588 | MS.gene028006:intron |
| TGGCTTGAGCCACTTCCTGA+TGG | 0.511317 | 5.2:-19176605 | MS.gene028006:CDS |
| GCGAAATACTGAGGATGATA+GGG | 0.519731 | 5.2:-19175874 | MS.gene028006:CDS |
| TTAACCTGTGGAGCATCGCC+AGG | 0.521049 | 5.2:+19177253 | None:intergenic |
| ACAGTCAATGGCGCTGCCAC+CGG | 0.522918 | 5.2:-19178332 | MS.gene028006:CDS |
| TTGATTAAGAAAAGTGATAC+CGG | 0.525069 | 5.2:-19178358 | MS.gene028006:CDS |
| GGCAGACTTCCATCAGGAAG+TGG | 0.528403 | 5.2:+19176596 | None:intergenic |
| TTGCCTGGAAGACGACTCTC+CGG | 0.529281 | 5.2:+19175569 | None:intergenic |
| CGGATTGTCTTCGTAACCCA+TGG | 0.532356 | 5.2:+19178656 | None:intergenic |
| GTCATTTACTAGGCCGAGGA+AGG | 0.534804 | 5.2:-19176983 | MS.gene028006:intron |
| AATTGGAGGAGGAAGATGAA+GGG | 0.534814 | 5.2:-19178297 | MS.gene028006:CDS |
| GAATTGGAGGAGGAAGATGA+AGG | 0.537209 | 5.2:-19178298 | MS.gene028006:CDS |
| AATTTGGTGGTTCTAAGAGA+GGG | 0.537655 | 5.2:-19178186 | MS.gene028006:CDS |
| ATCCGACGGCGAAGGATCAC+CGG | 0.537994 | 5.2:-19178497 | MS.gene028006:CDS |
| AATCATCAGCTTACTTTGAG+AGG | 0.539854 | 5.2:+19176759 | None:intergenic |
| ATATTTGGCAGACTTCCATC+AGG | 0.539886 | 5.2:+19176590 | None:intergenic |
| CACCTACCTTCATACGATGC+TGG | 0.541202 | 5.2:+19175442 | None:intergenic |
| ATAAGAAATTGCAGCAGTTG+AGG | 0.546540 | 5.2:-19174381 | MS.gene028006:CDS |
| CTATATTTAACAAGAGTACT+CGG | 0.547668 | 5.2:-19175908 | MS.gene028006:CDS |
| CTCCGGTGATCCTTCGCCGT+CGG | 0.548204 | 5.2:+19178495 | None:intergenic |
| GGAGCTGGAAGATGAATTGG+AGG | 0.551704 | 5.2:-19178311 | MS.gene028006:CDS |
| AGGATGATAATGAAGGTGCC+AGG | 0.553447 | 5.2:-19177351 | MS.gene028006:CDS |
| CTTCTTGAGTTTATTGACTG+CGG | 0.558309 | 5.2:+19176802 | None:intergenic |
| TGATACCGGAAAACAGTCAA+TGG | 0.558638 | 5.2:-19178344 | MS.gene028006:CDS |
| AGAGAACAGCTGAAGAGAAG+TGG | 0.564504 | 5.2:-19176411 | MS.gene028006:CDS |
| GAGTGTCGAAGGTCGTGGTA+TGG | 0.565291 | 5.2:-19174323 | MS.gene028006:CDS |
| AGGTGAAGTTAATGAGATGT+GGG | 0.565360 | 5.2:-19178134 | MS.gene028006:CDS |
| GCTTGAGGTTACAGCAGAAG+AGG | 0.568395 | 5.2:-19176852 | MS.gene028006:CDS |
| TACTCTTGTTAAATATAGGT+CGG | 0.568735 | 5.2:+19175913 | None:intergenic |
| CTTCCAGGCAACATGCATCA+AGG | 0.569461 | 5.2:-19175557 | MS.gene028006:CDS |
| TGGAGGAGGAAGATGAAGGG+AGG | 0.576145 | 5.2:-19178294 | MS.gene028006:CDS |
| AAGGAGAAGAGGCTGAAAGG+GGG | 0.577876 | 5.2:-19178235 | MS.gene028006:CDS |
| GTCTGCCAAATATCAACATA+CGG | 0.578071 | 5.2:-19176580 | MS.gene028006:CDS |
| AATTCATCTTCCAGCTCCGG+TGG | 0.578459 | 5.2:+19178316 | None:intergenic |
| GTCATCAAGGATGATAATGA+AGG | 0.578740 | 5.2:-19177358 | MS.gene028006:intron |
| AAATTTGGTGGTTCTAAGAG+AGG | 0.579251 | 5.2:-19178187 | MS.gene028006:CDS |
| GAGAGGACTTCTATAAGAAG+AGG | 0.579982 | 5.2:+19176776 | None:intergenic |
| TTTAGGTATCGTGATGAAGA+CGG | 0.580572 | 5.2:-19178550 | MS.gene028006:intron |
| GTAAACCGGTGTCTGTGACC+GGG | 0.582959 | 5.2:+19178417 | None:intergenic |
| ACAAGACCAGCATCGTATGA+AGG | 0.585240 | 5.2:-19175448 | MS.gene028006:intron |
| GAAGAGAAGTGGTCTTGGAA+AGG | 0.592321 | 5.2:-19176400 | MS.gene028006:intron |
| GCTGGAAGATGAATTGGAGG+AGG | 0.598340 | 5.2:-19178308 | MS.gene028006:CDS |
| GAATGTTATGGCTGAGCTTG+AGG | 0.598789 | 5.2:-19176867 | MS.gene028006:CDS |
| GACGTACAATCCGACGGCGA+AGG | 0.604113 | 5.2:-19178505 | MS.gene028006:CDS |
| ATTTGGTGGTTCTAAGAGAG+GGG | 0.606119 | 5.2:-19178185 | MS.gene028006:CDS |
| TCATCGTAACCATACAAAGC+AGG | 0.606767 | 5.2:+19177286 | None:intergenic |
| TGTAAATAGGAGATTAGCCA+AGG | 0.607197 | 5.2:-19176229 | MS.gene028006:CDS |
| GCTACAAAACTGAGTGTCGA+AGG | 0.607526 | 5.2:-19174334 | MS.gene028006:CDS |
| GAAGACGACTCTCCGGACCT+AGG | 0.607941 | 5.2:+19175576 | None:intergenic |
| AAGGTGAAGTTAATGAGATG+TGG | 0.610064 | 5.2:-19178135 | MS.gene028006:CDS |
| GGTTCCTTACAGGAGGCCAT+CGG | 0.612819 | 5.2:-19175853 | MS.gene028006:CDS |
| AAGGGTGGGTCTAAATTTGG+TGG | 0.617169 | 5.2:-19178199 | MS.gene028006:CDS |
| TCGTGCCCGGTCACAGACAC+CGG | 0.620079 | 5.2:-19178422 | MS.gene028006:CDS |
| GATAACTTTATAGACGACAC+TGG | 0.622093 | 5.2:-19177316 | MS.gene028006:CDS |
| TTACTAGGCCGAGGAAGGTG+AGG | 0.625192 | 5.2:-19176978 | MS.gene028006:intron |
| CTCGTGCTCTGATTTCATCG+GGG | 0.632880 | 5.2:+19175484 | None:intergenic |
| GGAAGAAAAGGAAGGAAGGT+GGG | 0.633425 | 5.2:-19178267 | MS.gene028006:CDS |
| TGCACTTGCTGGAAATTCTG+AGG | 0.634543 | 5.2:-19178110 | MS.gene028006:intron |
| AAACTGAGTGTCGAAGGTCG+TGG | 0.635870 | 5.2:-19174328 | MS.gene028006:CDS |
| GTAGTAGTAGTGGAAAGGGT+GGG | 0.636679 | 5.2:-19178213 | MS.gene028006:CDS |
| CGGAAGAAAAGGAAGGAAGG+TGG | 0.643701 | 5.2:-19178268 | MS.gene028006:CDS |
| GGTCTGGGAAGAAGGAGAAG+AGG | 0.645533 | 5.2:-19178246 | MS.gene028006:CDS |
| ATGATAGGGTTCCTTACAGG+AGG | 0.648469 | 5.2:-19175860 | MS.gene028006:CDS |
| ATTCGTCGAAATCAAAGCCG+AGG | 0.649525 | 5.2:-19178387 | MS.gene028006:CDS |
| GGCCAGCAACTAAAGCTGCA+GGG | 0.650244 | 5.2:-19175727 | MS.gene028006:CDS |
| GGAGCATCGCCAGGAGAACG+CGG | 0.650507 | 5.2:+19177262 | None:intergenic |
| GCAGGGATGCAATCAAGAGA+CGG | 0.653217 | 5.2:-19175710 | MS.gene028006:CDS |
| TGAAGACATGCGAAATACTG+AGG | 0.655646 | 5.2:-19175883 | MS.gene028006:CDS |
| GATCACAAAATCCAAAGGTG+TGG | 0.655821 | 5.2:+19175527 | None:intergenic |
| TACGACGACGTACAATCCGA+CGG | 0.665565 | 5.2:-19178511 | MS.gene028006:CDS |
| GGACGGATCACAAAATCCAA+AGG | 0.667839 | 5.2:+19175522 | None:intergenic |
| ACGTCGTCGTAATCCATCAA+CGG | 0.684522 | 5.2:+19178523 | None:intergenic |
| AAAAGTGGGAATGATCGTGA+AGG | 0.734592 | 5.2:-19178154 | MS.gene028006:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATCTTACTAAAAATTA+AGG | + | chr5.2:19175746-19175765 | None:intergenic | 10.0% |
| !! | AAAATCTTACTAAAAATTAA+GGG | + | chr5.2:19175745-19175764 | None:intergenic | 10.0% |
| !! | AAACTATATAATCAAACATA+TGG | + | chr5.2:19177850-19177869 | None:intergenic | 15.0% |
| !! | AACTATATATAGTTAAGTAT+AGG | - | chr5.2:19178322-19178341 | MS.gene028006:CDS | 15.0% |
| !! | ATTAAAATTGAATGATGAAA+AGG | + | chr5.2:19174901-19174920 | None:intergenic | 15.0% |
| !! | GAAAAGTTATTGTTAAAATA+AGG | + | chr5.2:19176267-19176286 | None:intergenic | 15.0% |
| !! | TAAATTTATAATTGTAATGC+AGG | - | chr5.2:19177364-19177383 | MS.gene028006:intron | 15.0% |
| !!! | AATTCAATTTCGATTTTTTT+AGG | - | chr5.2:19174396-19174415 | MS.gene028006:intron | 15.0% |
| !! | AAATTGTGTATTTAAGAGAT+GGG | - | chr5.2:19175008-19175027 | MS.gene028006:intron | 20.0% |
| !! | AACAGATTATTATAGAACAA+TGG | + | chr5.2:19178155-19178174 | None:intergenic | 20.0% |
| !! | AGAACTTATAAAAACAGATT+AGG | - | chr5.2:19175093-19175112 | MS.gene028006:intron | 20.0% |
| !! | ATAGTTTCATGAATAAAAGT+TGG | - | chr5.2:19177863-19177882 | MS.gene028006:intron | 20.0% |
| !! | ATGAAGAAATCAATGTAAAT+AGG | - | chr5.2:19176721-19176740 | MS.gene028006:intron | 20.0% |
| !! | CAAAAAAAAAGGATGTAAAA+GGG | + | chr5.2:19177572-19177591 | None:intergenic | 20.0% |
| !! | TAAGAAAAACAAGATAATGA+CGG | + | chr5.2:19176807-19176826 | None:intergenic | 20.0% |
| !! | TCTTGTATGAAATCATTTAT+AGG | - | chr5.2:19175911-19175930 | MS.gene028006:CDS | 20.0% |
| !! | TTATTTATTGGCATAAAAAC+TGG | + | chr5.2:19177753-19177772 | None:intergenic | 20.0% |
| !! | TTGATAAAAACATAATAACC+TGG | + | chr5.2:19176695-19176714 | None:intergenic | 20.0% |
| !! | TTTATTAGTTGAGAATGTTA+TGG | - | chr5.2:19176084-19176103 | MS.gene028006:intron | 20.0% |
| !!! | AGGTTATTATGTTTTTATCA+AGG | - | chr5.2:19176694-19176713 | MS.gene028006:intron | 20.0% |
| !!! | ATTTACATTGATTTCTTCAT+CGG | + | chr5.2:19176721-19176740 | None:intergenic | 20.0% |
| !!! | ATTTCTATTTTTGAATTGCT+TGG | - | chr5.2:19177152-19177171 | MS.gene028006:intron | 20.0% |
| !!! | CTTTTACATCCTTTTTTTTT+GGG | - | chr5.2:19177571-19177590 | MS.gene028006:intron | 20.0% |
| !!! | CTTTTTTACATGTATGTTTT+GGG | - | chr5.2:19177939-19177958 | MS.gene028006:intron | 20.0% |
| !!! | TCTAGAATTTTTTCACTTTA+GGG | - | chr5.2:19174344-19174363 | MS.gene028006:CDS | 20.0% |
| ! | AAAGTTGGATGATTTAAACA+TGG | - | chr5.2:19177878-19177897 | MS.gene028006:intron | 25.0% |
| ! | AAGAGCTTATATAAACAACT+TGG | + | chr5.2:19175344-19175363 | None:intergenic | 25.0% |
| ! | AAGTTGGATGATTTAAACAT+GGG | - | chr5.2:19177879-19177898 | MS.gene028006:intron | 25.0% |
| ! | ACAACAAATAATATGCATAC+AGG | + | chr5.2:19178227-19178246 | None:intergenic | 25.0% |
| ! | ACTAATAATGAACTCATGAA+AGG | + | chr5.2:19176990-19177009 | None:intergenic | 25.0% |
| ! | ATGACTAATAATGATCTATC+AGG | + | chr5.2:19175488-19175507 | None:intergenic | 25.0% |
| ! | CAAATTGTGTATTTAAGAGA+TGG | - | chr5.2:19175007-19175026 | MS.gene028006:intron | 25.0% |
| ! | CAATTATAAATTTACCATCC+CGG | + | chr5.2:19177358-19177377 | None:intergenic | 25.0% |
| ! | CCAAAAAAAAAGGATGTAAA+AGG | + | chr5.2:19177573-19177592 | None:intergenic | 25.0% |
| ! | CCAAAACATACATGTAAAAA+AGG | + | chr5.2:19177941-19177960 | None:intergenic | 25.0% |
| ! | CTGGAAAATGAAATATGTAA+TGG | - | chr5.2:19175836-19175855 | MS.gene028006:intron | 25.0% |
| ! | CTTAAAGAACCCAAAAAAAA+AGG | + | chr5.2:19177583-19177602 | None:intergenic | 25.0% |
| ! | GATACAATGCTAAATAATCT+TGG | + | chr5.2:19176483-19176502 | None:intergenic | 25.0% |
| ! | TAAACACTGTATAAAGTGAA+GGG | + | chr5.2:19176849-19176868 | None:intergenic | 25.0% |
| ! | TAAATGACATAATAGAGAGA+AGG | + | chr5.2:19175968-19175987 | None:intergenic | 25.0% |
| ! | TAACTGCATAACAAGAAAAA+CGG | + | chr5.2:19176505-19176524 | None:intergenic | 25.0% |
| ! | TACTCTTGTTAAATATAGGT+CGG | + | chr5.2:19177053-19177072 | None:intergenic | 25.0% |
| ! | TGACTAATAATGATCTATCA+GGG | + | chr5.2:19175487-19175506 | None:intergenic | 25.0% |
| ! | TGCTAAATTTATTGAAGAGT+TGG | - | chr5.2:19176338-19176357 | MS.gene028006:intron | 25.0% |
| ! | TGCTTTACAATTACCTAAAA+TGG | - | chr5.2:19176930-19176949 | MS.gene028006:CDS | 25.0% |
| ! | TTAAACACTGTATAAAGTGA+AGG | + | chr5.2:19176850-19176869 | None:intergenic | 25.0% |
| ! | TTGATTAAGAAAAGTGATAC+CGG | - | chr5.2:19174605-19174624 | MS.gene028006:intron | 25.0% |
| ! | TTGCATCTAAATCATCATAA+TGG | + | chr5.2:19176450-19176469 | None:intergenic | 25.0% |
| ! | TTTACTTATTGCATAGTAAC+AGG | - | chr5.2:19177181-19177200 | MS.gene028006:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr5.2:19175389-19175408 | MS.gene028006:intron | 25.0% |
| !! | ATTATGTTGTTTATCCAAAC+AGG | - | chr5.2:19175272-19175291 | MS.gene028006:intron | 25.0% |
| !! | CAGAAAGATTTAGAATTTCA+AGG | + | chr5.2:19178438-19178457 | None:intergenic | 25.0% |
| !! | CCTTTTACATCCTTTTTTTT+TGG | - | chr5.2:19177570-19177589 | MS.gene028006:intron | 25.0% |
| !! | TAGTTTTCTTGAACTTTTAC+AGG | - | chr5.2:19177215-19177234 | MS.gene028006:intron | 25.0% |
| !! | TATTAGTCATGTCTTTTAGT+TGG | - | chr5.2:19175498-19175517 | MS.gene028006:CDS | 25.0% |
| !! | TCTCTATTATGTCATTTACT+AGG | - | chr5.2:19175970-19175989 | MS.gene028006:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr5.2:19175390-19175409 | MS.gene028006:intron | 25.0% |
| !! | TTATGTTGTTTATCCAAACA+GGG | - | chr5.2:19175273-19175292 | MS.gene028006:intron | 25.0% |
| !! | TTTTATGCCAATAAATAAGC+AGG | - | chr5.2:19177755-19177774 | MS.gene028006:intron | 25.0% |
| !!! | ATTAGTCATGTCTTTTAGTT+GGG | - | chr5.2:19175499-19175518 | MS.gene028006:CDS | 25.0% |
| !!! | CCTTTTTTACATGTATGTTT+TGG | - | chr5.2:19177938-19177957 | MS.gene028006:intron | 25.0% |
| !!! | CTATATTTAACAAGAGTACT+CGG | - | chr5.2:19177055-19177074 | MS.gene028006:intron | 25.0% |
| !!! | CTCTAGAATTTTTTCACTTT+AGG | - | chr5.2:19174343-19174362 | MS.gene028006:CDS | 25.0% |
| !!! | GTAGGTGTTTTTTAAGTTTT+GGG | - | chr5.2:19177537-19177556 | MS.gene028006:intron | 25.0% |
| !!! | GTTTTTCTTTTTGTGTTGTT+TGG | - | chr5.2:19175529-19175548 | MS.gene028006:CDS | 25.0% |
| !!! | TATGTAATGGTTGTTTTTTG+AGG | - | chr5.2:19175849-19175868 | MS.gene028006:CDS | 25.0% |
| !!! | TCTGATATTTTGGATAGAAT+GGG | - | chr5.2:19177966-19177985 | MS.gene028006:intron | 25.0% |
| !!! | TGTTGTTTGGAGTAATATTT+TGG | - | chr5.2:19175542-19175561 | MS.gene028006:CDS | 25.0% |
| !!! | TTCTGATATTTTGGATAGAA+TGG | - | chr5.2:19177965-19177984 | MS.gene028006:intron | 25.0% |
| !!! | TTTTGGTTTAAATTTCAGCA+AGG | - | chr5.2:19177996-19178015 | MS.gene028006:intron | 25.0% |
| AAAACATGATATCCACAAGT+TGG | + | chr5.2:19178062-19178081 | None:intergenic | 30.0% | |
| AAACATGATATCCACAAGTT+GGG | + | chr5.2:19178061-19178080 | None:intergenic | 30.0% | |
| AAATGCTAGAGAAGAAAACT+CGG | - | chr5.2:19176868-19176887 | MS.gene028006:CDS | 30.0% | |
| ACTAATAAAGCAATTTCTGC+AGG | + | chr5.2:19176073-19176092 | None:intergenic | 30.0% | |
| ATGATTTAAACATGGGATAC+TGG | - | chr5.2:19177886-19177905 | MS.gene028006:intron | 30.0% | |
| ATGTGAACAAAACAACGATA+GGG | - | chr5.2:19176602-19176621 | MS.gene028006:CDS | 30.0% | |
| CGAGTACTCTTGTTAAATAT+AGG | + | chr5.2:19177057-19177076 | None:intergenic | 30.0% | |
| GAAGAAAAAAAACAACAGCA+TGG | + | chr5.2:19178205-19178224 | None:intergenic | 30.0% | |
| GGAATTTGGAAGTAATATAC+TGG | - | chr5.2:19176648-19176667 | MS.gene028006:CDS | 30.0% | |
| TCTCTATGATGTGTACTTTA+TGG | - | chr5.2:19175444-19175463 | MS.gene028006:intron | 30.0% | |
| TTAGTAGAATTTGACCAATG+TGG | - | chr5.2:19178541-19178560 | MS.gene028006:CDS | 30.0% | |
| ! | CTGATTTGAAGAACTTGAAA+TGG | + | chr5.2:19175806-19175825 | None:intergenic | 30.0% |
| ! | CTTTTCACATACTATTTCAC+AGG | - | chr5.2:19176281-19176300 | MS.gene028006:intron | 30.0% |
| ! | GTTTTCTTTGTGTTGTGTTT+TGG | - | chr5.2:19176896-19176915 | MS.gene028006:CDS | 30.0% |
| ! | TCATAATGCTCTAGATCTAT+AGG | + | chr5.2:19176528-19176547 | None:intergenic | 30.0% |
| ! | TTGTTGTTCAGTTTCACTTA+AGG | - | chr5.2:19177327-19177346 | MS.gene028006:CDS | 30.0% |
| !! | AAACACTTCTGAGATAGTTT+GGG | - | chr5.2:19175070-19175089 | MS.gene028006:intron | 30.0% |
| !! | AATCAAGGATCTTTTCAAGA+TGG | - | chr5.2:19176018-19176037 | MS.gene028006:intron | 30.0% |
| !! | ATCAAGGATCTTTTCAAGAT+GGG | - | chr5.2:19176019-19176038 | MS.gene028006:intron | 30.0% |
| !! | CAAGGATTTGGTTGATAAAT+GGG | - | chr5.2:19176752-19176771 | MS.gene028006:intron | 30.0% |
| !! | GATATTTTCATTGTTTTGCC+AGG | - | chr5.2:19176674-19176693 | MS.gene028006:intron | 30.0% |
| !! | GTCTAAATGTGGTTTGTTAT+TGG | - | chr5.2:19176627-19176646 | MS.gene028006:CDS | 30.0% |
| !! | TAAACACTTCTGAGATAGTT+TGG | - | chr5.2:19175069-19175088 | MS.gene028006:intron | 30.0% |
| !! | TGTGGTTTGTTATTGGAATT+TGG | - | chr5.2:19176634-19176653 | MS.gene028006:CDS | 30.0% |
| !! | TTAGTCATGTCTTTTAGTTG+GGG | - | chr5.2:19175500-19175519 | MS.gene028006:CDS | 30.0% |
| !! | TTTGAAGTTTAGTTTGTGTG+CGG | - | chr5.2:19177683-19177702 | MS.gene028006:intron | 30.0% |
| !!! | GGTAGGTGTTTTTTAAGTTT+TGG | - | chr5.2:19177536-19177555 | MS.gene028006:intron | 30.0% |
| !!! | TTTTTGAGGTCAAACTTTCT+CGG | - | chr5.2:19175863-19175882 | MS.gene028006:CDS | 30.0% |
| AAATCTCTGTGATCTCCATA+TGG | - | chr5.2:19178089-19178108 | MS.gene028006:intron | 35.0% | |
| AAGGTGAAGTTAATGAGATG+TGG | - | chr5.2:19174828-19174847 | MS.gene028006:intron | 35.0% | |
| AATCATCAGCTTACTTTGAG+AGG | + | chr5.2:19176207-19176226 | None:intergenic | 35.0% | |
| AATGATCTATCAGGGTAGAA+AGG | + | chr5.2:19175479-19175498 | None:intergenic | 35.0% | |
| AATGCTAGAGAAGAAAACTC+GGG | - | chr5.2:19176869-19176888 | MS.gene028006:CDS | 35.0% | |
| AGGTGAAGTTAATGAGATGT+GGG | - | chr5.2:19174829-19174848 | MS.gene028006:intron | 35.0% | |
| AGTTTCACTTAAGGAATCAC+CGG | - | chr5.2:19177336-19177355 | MS.gene028006:CDS | 35.0% | |
| ATAAGAAATTGCAGCAGTTG+AGG | - | chr5.2:19178582-19178601 | MS.gene028006:intron | 35.0% | |
| ATTTAAGAGATGGGTCTGTT+TGG | - | chr5.2:19175017-19175036 | MS.gene028006:intron | 35.0% | |
| ATTTGCTTGTCATTGGAAGT+TGG | + | chr5.2:19177660-19177679 | None:intergenic | 35.0% | |
| CAAACATATGGCATGTGATA+TGG | + | chr5.2:19177838-19177857 | None:intergenic | 35.0% | |
| CCATTTATCAACCAAATCCT+TGG | + | chr5.2:19176754-19176773 | None:intergenic | 35.0% | |
| CTTATTGCATAGTAACAGGT+TGG | - | chr5.2:19177185-19177204 | MS.gene028006:intron | 35.0% | |
| GATAACTTTATAGACGACAC+TGG | - | chr5.2:19175647-19175666 | MS.gene028006:intron | 35.0% | |
| GATGTGAACAAAACAACGAT+AGG | - | chr5.2:19176601-19176620 | MS.gene028006:CDS | 35.0% | |
| GATTTGGATCTTTCACAGTA+AGG | - | chr5.2:19177283-19177302 | MS.gene028006:CDS | 35.0% | |
| GCACACAAACTAAACTTCAA+AGG | + | chr5.2:19177684-19177703 | None:intergenic | 35.0% | |
| GCTACATTAGACTGTTGTTA+TGG | - | chr5.2:19176231-19176250 | MS.gene028006:CDS | 35.0% | |
| GGGAATAAATCATTAACCTG+TGG | + | chr5.2:19175725-19175744 | None:intergenic | 35.0% | |
| GTCTGCCAAATATCAACATA+CGG | - | chr5.2:19176383-19176402 | MS.gene028006:intron | 35.0% | |
| GTTATCATCATCCATATTCC+TGG | + | chr5.2:19175633-19175652 | None:intergenic | 35.0% | |
| TAACAACAGTCTAATGTAGC+AGG | + | chr5.2:19176231-19176250 | None:intergenic | 35.0% | |
| TAAGAAATTGCAGCAGTTGA+GGG | - | chr5.2:19178583-19178602 | MS.gene028006:intron | 35.0% | |
| TAGAATTTGACCAATGTGGA+TGG | - | chr5.2:19178545-19178564 | MS.gene028006:CDS | 35.0% | |
| TATAATTGTAATGCAGGCCT+AGG | - | chr5.2:19177370-19177389 | MS.gene028006:intron | 35.0% | |
| TCTAGAGAGAGAGAAACTTA+CGG | + | chr5.2:19174330-19174349 | None:intergenic | 35.0% | |
| TGAGGAAGATGATGAAATCA+AGG | - | chr5.2:19176003-19176022 | MS.gene028006:intron | 35.0% | |
| TGTGAACAAAACAACGATAG+GGG | - | chr5.2:19176603-19176622 | MS.gene028006:CDS | 35.0% | |
| TTCTTAATCAAGCGTTTCCT+CGG | + | chr5.2:19174596-19174615 | None:intergenic | 35.0% | |
| ! | ATCGGGGTCAATTTTAGATT+GGG | + | chr5.2:19177466-19177485 | None:intergenic | 35.0% |
| ! | CAAAGGAATTTGCTTGTCAT+TGG | + | chr5.2:19177667-19177686 | None:intergenic | 35.0% |
| ! | CTGAGGTACATTTGTGATTT+TGG | - | chr5.2:19174870-19174889 | MS.gene028006:intron | 35.0% |
| ! | CTTCTTGAGTTTATTGACTG+CGG | + | chr5.2:19176164-19176183 | None:intergenic | 35.0% |
| ! | GGTCTTATGTATGAGAATAG+TGG | - | chr5.2:19175294-19175313 | MS.gene028006:intron | 35.0% |
| ! | GTCATCAAGGATGATAATGA+AGG | - | chr5.2:19175605-19175624 | MS.gene028006:intron | 35.0% |
| ! | TGTAAATAGGAGATTAGCCA+AGG | - | chr5.2:19176734-19176753 | MS.gene028006:intron | 35.0% |
| ! | TTCTTGAGTTTATTGACTGC+GGG | + | chr5.2:19176163-19176182 | None:intergenic | 35.0% |
| ! | TTTAGGTATCGTGATGAAGA+CGG | - | chr5.2:19174413-19174432 | MS.gene028006:intron | 35.0% |
| ! | TTTGGGCGTTTCTGATATTT+TGG | - | chr5.2:19177956-19177975 | MS.gene028006:intron | 35.0% |
| !! | AAATTTGGTGGTTCTAAGAG+AGG | - | chr5.2:19174776-19174795 | MS.gene028006:intron | 35.0% |
| !! | AAGGCATTGAGCATTGTTAT+TGG | + | chr5.2:19177922-19177941 | None:intergenic | 35.0% |
| !! | AATTTGGTGGTTCTAAGAGA+GGG | - | chr5.2:19174777-19174796 | MS.gene028006:intron | 35.0% |
| !! | ATTTTGGATAGAATGGGTTC+TGG | - | chr5.2:19177972-19177991 | MS.gene028006:intron | 35.0% |
| !! | CAGCTAGAGTTTTTAGATCA+CGG | - | chr5.2:19176313-19176332 | MS.gene028006:intron | 35.0% |
| !! | CCAAGGATTTGGTTGATAAA+TGG | - | chr5.2:19176751-19176770 | MS.gene028006:intron | 35.0% |
| !! | CTGTTTGGATTGGCTTATTT+GGG | - | chr5.2:19175032-19175051 | MS.gene028006:intron | 35.0% |
| !! | CTTTGTTGTTTCTGTCATCA+AGG | - | chr5.2:19175592-19175611 | MS.gene028006:intron | 35.0% |
| !! | TATCTCAGAAGTGTTTATGC+CGG | + | chr5.2:19175066-19175085 | None:intergenic | 35.0% |
| !! | TCAAGGATCTTTTCAAGATG+GGG | - | chr5.2:19176020-19176039 | MS.gene028006:intron | 35.0% |
| !! | TCTGTTTGGATTGGCTTATT+TGG | - | chr5.2:19175031-19175050 | MS.gene028006:intron | 35.0% |
| AAAAGTGGGAATGATCGTGA+AGG | - | chr5.2:19174809-19174828 | MS.gene028006:intron | 40.0% | |
| AAATACCGTGAGTGTGAGAA+TGG | - | chr5.2:19178267-19178286 | MS.gene028006:CDS | 40.0% | |
| AACAGCATTAGGCCAAAGAT+TGG | + | chr5.2:19178125-19178144 | None:intergenic | 40.0% | |
| AAGAGACGGTGATCTTGATT+TGG | - | chr5.2:19177267-19177286 | MS.gene028006:CDS | 40.0% | |
| AAGAGGATGCTGAGCTTAAT+CGG | - | chr5.2:19176128-19176147 | MS.gene028006:intron | 40.0% | |
| AAGCACAATGTAAAGTCGCT+AGG | + | chr5.2:19177804-19177823 | None:intergenic | 40.0% | |
| AATACCGTGAGTGTGAGAAT+GGG | - | chr5.2:19178268-19178287 | MS.gene028006:CDS | 40.0% | |
| AATTGGAGGAGGAAGATGAA+GGG | - | chr5.2:19174666-19174685 | MS.gene028006:intron | 40.0% | |
| ACAGCATTAGGCCAAAGATT+GGG | + | chr5.2:19178124-19178143 | None:intergenic | 40.0% | |
| ACCAAAAAAGAAGCAGCTTC+AGG | - | chr5.2:19178607-19178626 | MS.gene028006:intron | 40.0% | |
| ATATTTGGCAGACTTCCATC+AGG | + | chr5.2:19176376-19176395 | None:intergenic | 40.0% | |
| ATGGTACCAGAAACAGCATT+AGG | + | chr5.2:19178136-19178155 | None:intergenic | 40.0% | |
| ATTGGGTGCAAAACACCATA+TGG | + | chr5.2:19178107-19178126 | None:intergenic | 40.0% | |
| CTCATACATAAGACCCTGTT+TGG | + | chr5.2:19175289-19175308 | None:intergenic | 40.0% | |
| CTTGTCATTGGAAGTTGGAA+AGG | + | chr5.2:19177655-19177674 | None:intergenic | 40.0% | |
| GAGAGGACTTCTATAAGAAG+AGG | + | chr5.2:19176190-19176209 | None:intergenic | 40.0% | |
| GATCACAAAATCCAAAGGTG+TGG | + | chr5.2:19177439-19177458 | None:intergenic | 40.0% | |
| GCGAAATACTGAGGATGATA+GGG | - | chr5.2:19177089-19177108 | MS.gene028006:intron | 40.0% | |
| GCTGTCCGTATGTTGATATT+TGG | + | chr5.2:19176391-19176410 | None:intergenic | 40.0% | |
| GCTTATTTGGGCTTATCTAC+CGG | - | chr5.2:19175044-19175063 | MS.gene028006:intron | 40.0% | |
| GTTTCACTTAAGGAATCACC+GGG | - | chr5.2:19177337-19177356 | MS.gene028006:CDS | 40.0% | |
| TCACACGCCTGCTTATTTAT+TGG | + | chr5.2:19177765-19177784 | None:intergenic | 40.0% | |
| TCATCGTAACCATACAAAGC+AGG | + | chr5.2:19175680-19175699 | None:intergenic | 40.0% | |
| TGAAGACATGCGAAATACTG+AGG | - | chr5.2:19177080-19177099 | MS.gene028006:intron | 40.0% | |
| TGATACCGGAAAACAGTCAA+TGG | - | chr5.2:19174619-19174638 | MS.gene028006:intron | 40.0% | |
| TGCGAAATACTGAGGATGAT+AGG | - | chr5.2:19177088-19177107 | MS.gene028006:intron | 40.0% | |
| TGTTTGATAAGCACACTGCA+GGG | - | chr5.2:19178369-19178388 | MS.gene028006:CDS | 40.0% | |
| TTGTGTGCGGCTTATATCAA+CGG | - | chr5.2:19177696-19177715 | MS.gene028006:intron | 40.0% | |
| TTGTTTGATAAGCACACTGC+AGG | - | chr5.2:19178368-19178387 | MS.gene028006:CDS | 40.0% | |
| ! | ACAATTTTCATGATCGTGCC+CGG | - | chr5.2:19174528-19174547 | MS.gene028006:intron | 40.0% |
| ! | CATCGGGGTCAATTTTAGAT+TGG | + | chr5.2:19177467-19177486 | None:intergenic | 40.0% |
| ! | GGTCAATTTTAGATTGGGGA+CGG | + | chr5.2:19177461-19177480 | None:intergenic | 40.0% |
| ! | TAGGAGATTAGCCAAGGATT+TGG | - | chr5.2:19176740-19176759 | MS.gene028006:intron | 40.0% |
| ! | TCGGGGTCAATTTTAGATTG+GGG | + | chr5.2:19177465-19177484 | None:intergenic | 40.0% |
| ! | TTATGTCATTTACTAGGCCG+AGG | - | chr5.2:19175976-19175995 | MS.gene028006:intron | 40.0% |
| ! | TTCTCACACTCACGGTATTT+TGG | + | chr5.2:19178267-19178286 | None:intergenic | 40.0% |
| !! | ACGGTGAAGTTTCTAGTGTA+TGG | - | chr5.2:19177715-19177734 | MS.gene028006:intron | 40.0% |
| !! | ATTTGGTGGTTCTAAGAGAG+GGG | - | chr5.2:19174778-19174797 | MS.gene028006:intron | 40.0% |
| !! | CAAGCGTACTTTTTAACCGA+TGG | + | chr5.2:19177129-19177148 | None:intergenic | 40.0% |
| !! | CGGTGAAGTTTCTAGTGTAT+GGG | - | chr5.2:19177716-19177735 | MS.gene028006:intron | 40.0% |
| !! | CTTCAAGAGTCAGCCATTTT+AGG | + | chr5.2:19176946-19176965 | None:intergenic | 40.0% |
| !! | GGTGAAGTTTCTAGTGTATG+GGG | - | chr5.2:19177717-19177736 | MS.gene028006:intron | 40.0% |
| !! | TAATGAAGGTGCCAGGAATA+TGG | - | chr5.2:19175619-19175638 | MS.gene028006:intron | 40.0% |
| !!! | ATAGAATGGGTTCTGGCTTT+TGG | - | chr5.2:19177979-19177998 | MS.gene028006:intron | 40.0% |
| AAGAAGGAGAAGAGGCTGAA+AGG | - | chr5.2:19174725-19174744 | MS.gene028006:intron | 45.0% | |
| AAGCGGAAGAAAAGGAAGGA+AGG | - | chr5.2:19174692-19174711 | MS.gene028006:intron | 45.0% | |
| AAGGGTGGGTCTAAATTTGG+TGG | - | chr5.2:19174764-19174783 | MS.gene028006:intron | 45.0% | |
| ACAAGACCAGCATCGTATGA+AGG | - | chr5.2:19177515-19177534 | MS.gene028006:intron | 45.0% | |
| ACGTCGTCGTAATCCATCAA+CGG | + | chr5.2:19174443-19174462 | None:intergenic | 45.0% | |
| AGAAGGAGAAGAGGCTGAAA+GGG | - | chr5.2:19174726-19174745 | MS.gene028006:intron | 45.0% | |
| AGAGAACAGCTGAAGAGAAG+TGG | - | chr5.2:19176552-19176571 | MS.gene028006:intron | 45.0% | |
| AGAGATGGGTCTGTTTGGAT+TGG | - | chr5.2:19175022-19175041 | MS.gene028006:intron | 45.0% | |
| AGGATGATAGGGTTCCTTAC+AGG | - | chr5.2:19177100-19177119 | MS.gene028006:intron | 45.0% | |
| ATACCGTGAGTGTGAGAATG+GGG | - | chr5.2:19178269-19178288 | MS.gene028006:CDS | 45.0% | |
| ATCATCTTCCTCACCTTCCT+CGG | + | chr5.2:19175996-19176015 | None:intergenic | 45.0% | |
| ATGATAGGGTTCCTTACAGG+AGG | - | chr5.2:19177103-19177122 | MS.gene028006:intron | 45.0% | |
| ATTCGTCGAAATCAAAGCCG+AGG | - | chr5.2:19174576-19174595 | MS.gene028006:intron | 45.0% | |
| CTAGAGAAGAAAACTCGGGT+GGG | - | chr5.2:19176873-19176892 | MS.gene028006:CDS | 45.0% | |
| CTATCAGGGTAGAAAGGAGA+GGG | + | chr5.2:19175473-19175492 | None:intergenic | 45.0% | |
| CTGCAGTTAACCATCCACAT+TGG | + | chr5.2:19178558-19178577 | None:intergenic | 45.0% | |
| GAATGTTATGGCTGAGCTTG+AGG | - | chr5.2:19176096-19176115 | MS.gene028006:intron | 45.0% | |
| GAATTGGAGGAGGAAGATGA+AGG | - | chr5.2:19174665-19174684 | MS.gene028006:intron | 45.0% | |
| GACGAATCGTTGTCGTAAAC+CGG | + | chr5.2:19174563-19174582 | None:intergenic | 45.0% | |
| GGAAAGGGTGGGTCTAAATT+TGG | - | chr5.2:19174761-19174780 | MS.gene028006:intron | 45.0% | |
| GGAAGAAAAGGAAGGAAGGT+GGG | - | chr5.2:19174696-19174715 | MS.gene028006:intron | 45.0% | |
| GGACGGATCACAAAATCCAA+AGG | + | chr5.2:19177444-19177463 | None:intergenic | 45.0% | |
| GGAGTAGAACCTGCTTTGTA+TGG | - | chr5.2:19175668-19175687 | MS.gene028006:intron | 45.0% | |
| TAGAGAAGAAAACTCGGGTG+GGG | - | chr5.2:19176874-19176893 | MS.gene028006:CDS | 45.0% | |
| TCAAATCAGCTGTAGAGTGC+TGG | - | chr5.2:19175817-19175836 | MS.gene028006:intron | 45.0% | |
| TCCAATTCATCTTCCAGCTC+CGG | + | chr5.2:19174653-19174672 | None:intergenic | 45.0% | |
| TCTATCAGGGTAGAAAGGAG+AGG | + | chr5.2:19175474-19175493 | None:intergenic | 45.0% | |
| TGCTCGTGCTCTGATTTCAT+CGG | + | chr5.2:19177484-19177503 | None:intergenic | 45.0% | |
| ! | AAATCCAAAGGTGTGGCTTC+TGG | + | chr5.2:19177432-19177451 | None:intergenic | 45.0% |
| ! | AGAAGTGGTCTTGGAAAGGT+GGG | - | chr5.2:19176567-19176586 | MS.gene028006:CDS | 45.0% |
| ! | ATCCACAAGTTGGGAATGCA+AGG | + | chr5.2:19178052-19178071 | None:intergenic | 45.0% |
| ! | GAAGAGAAGTGGTCTTGGAA+AGG | - | chr5.2:19176563-19176582 | MS.gene028006:CDS | 45.0% |
| ! | GGTGTTTTGCACCCAATCTT+TGG | - | chr5.2:19178110-19178129 | MS.gene028006:intron | 45.0% |
| ! | GTAGTAGTAGTGGAAAGGGT+GGG | - | chr5.2:19174750-19174769 | MS.gene028006:intron | 45.0% |
| ! | TCCACAAGTTGGGAATGCAA+GGG | + | chr5.2:19178051-19178070 | None:intergenic | 45.0% |
| ! | TCGAAATCGTCGAGTTGTTG+TGG | + | chr5.2:19174494-19174513 | None:intergenic | 45.0% |
| ! | TGCACTTGCTGGAAATTCTG+AGG | - | chr5.2:19174853-19174872 | MS.gene028006:intron | 45.0% |
| ! | TTTCTAGTGTATGGGGCAGA+TGG | - | chr5.2:19177724-19177743 | MS.gene028006:intron | 45.0% |
| !! | ACGATAGGGGTGTCTAAATG+TGG | - | chr5.2:19176616-19176635 | MS.gene028006:CDS | 45.0% |
| !! | AGGATGATAATGAAGGTGCC+AGG | - | chr5.2:19175612-19175631 | MS.gene028006:intron | 45.0% |
| !! | CTTTGGCCTAATGCTGTTTC+TGG | - | chr5.2:19178127-19178146 | MS.gene028006:CDS | 45.0% |
| !! | GCTACAAAACTGAGTGTCGA+AGG | - | chr5.2:19178629-19178648 | MS.gene028006:intron | 45.0% |
| !!! | GCCTGAAGCTGCTTCTTTTT+TGG | + | chr5.2:19178611-19178630 | None:intergenic | 45.0% |
| AAAAGGAAGGAAGGTGGGTC+TGG | - | chr5.2:19174701-19174720 | MS.gene028006:intron | 50.0% | |
| AAAGGAAGGAAGGTGGGTCT+GGG | - | chr5.2:19174702-19174721 | MS.gene028006:intron | 50.0% | |
| AAGGAGAAGAGGCTGAAAGG+GGG | - | chr5.2:19174728-19174747 | MS.gene028006:intron | 50.0% | |
| AAGGGAGGAAGCGGAAGAAA+AGG | - | chr5.2:19174684-19174703 | MS.gene028006:intron | 50.0% | |
| AATTCATCTTCCAGCTCCGG+TGG | + | chr5.2:19174650-19174669 | None:intergenic | 50.0% | |
| ACCGGAGCTGGAAGATGAAT+TGG | - | chr5.2:19174649-19174668 | MS.gene028006:intron | 50.0% | |
| AGGAAGATGAAGGGAGGAAG+CGG | - | chr5.2:19174675-19174694 | MS.gene028006:intron | 50.0% | |
| CACCTACCTTCATACGATGC+TGG | + | chr5.2:19177524-19177543 | None:intergenic | 50.0% | |
| CACTTAAGGAATCACCGGGA+TGG | - | chr5.2:19177341-19177360 | MS.gene028006:CDS | 50.0% | |
| CAGCTGAAGAGAAGTGGTCT+TGG | - | chr5.2:19176558-19176577 | MS.gene028006:CDS | 50.0% | |
| CGGAAGAAAAGGAAGGAAGG+TGG | - | chr5.2:19174695-19174714 | MS.gene028006:intron | 50.0% | |
| CTCGTGCTCTGATTTCATCG+GGG | + | chr5.2:19177482-19177501 | None:intergenic | 50.0% | |
| CTGAAAGGGGGTAGTAGTAG+TGG | - | chr5.2:19174740-19174759 | MS.gene028006:intron | 50.0% | |
| CTTCCAGGCAACATGCATCA+AGG | - | chr5.2:19177406-19177425 | MS.gene028006:intron | 50.0% | |
| GAAGGAGAAGAGGCTGAAAG+GGG | - | chr5.2:19174727-19174746 | MS.gene028006:intron | 50.0% | |
| GACCAGCATCGTATGAAGGT+AGG | - | chr5.2:19177519-19177538 | MS.gene028006:intron | 50.0% | |
| GAGGAAGCGGAAGAAAAGGA+AGG | - | chr5.2:19174688-19174707 | MS.gene028006:intron | 50.0% | |
| GCAGGGATGCAATCAAGAGA+CGG | - | chr5.2:19177253-19177272 | MS.gene028006:intron | 50.0% | |
| GCTAGAGAAGAAAACTCGGG+TGG | - | chr5.2:19176872-19176891 | MS.gene028006:CDS | 50.0% | |
| GCTCGTGCTCTGATTTCATC+GGG | + | chr5.2:19177483-19177502 | None:intergenic | 50.0% | |
| GCTGGAAGATGAATTGGAGG+AGG | - | chr5.2:19174655-19174674 | MS.gene028006:intron | 50.0% | |
| GCTTGAGGTTACAGCAGAAG+AGG | - | chr5.2:19176111-19176130 | MS.gene028006:intron | 50.0% | |
| GGAGCTGGAAGATGAATTGG+AGG | - | chr5.2:19174652-19174671 | MS.gene028006:intron | 50.0% | |
| GTCATTTACTAGGCCGAGGA+AGG | - | chr5.2:19175980-19175999 | MS.gene028006:intron | 50.0% | |
| TACCGTGAGTGTGAGAATGG+GGG | - | chr5.2:19178270-19178289 | MS.gene028006:CDS | 50.0% | |
| TACGACGACGTACAATCCGA+CGG | - | chr5.2:19174452-19174471 | MS.gene028006:intron | 50.0% | |
| TCCCTTGCATTCCCAACTTG+TGG | - | chr5.2:19178047-19178066 | MS.gene028006:intron | 50.0% | |
| TGAAGACGGTGAACCGTTGA+TGG | - | chr5.2:19174427-19174446 | MS.gene028006:intron | 50.0% | |
| TTAACCGATGGCCTCCTGTA+AGG | + | chr5.2:19177117-19177136 | None:intergenic | 50.0% | |
| TTGTAATGCAGGCCTAGGTC+CGG | - | chr5.2:19177375-19177394 | MS.gene028006:intron | 50.0% | |
| ! | AGGGGGTAGTAGTAGTGGAA+AGG | - | chr5.2:19174745-19174764 | MS.gene028006:intron | 50.0% |
| ! | ATCCCTGCAGCTTTAGTTGC+TGG | + | chr5.2:19177241-19177260 | None:intergenic | 50.0% |
| ! | GAGAAGTGGTCTTGGAAAGG+TGG | - | chr5.2:19176566-19176585 | MS.gene028006:CDS | 50.0% |
| ! | GGGGGTAGTAGTAGTGGAAA+GGG | - | chr5.2:19174746-19174765 | MS.gene028006:intron | 50.0% |
| ! | GGTAGTAGTAGTGGAAAGGG+TGG | - | chr5.2:19174749-19174768 | MS.gene028006:intron | 50.0% |
| !! | AAACTGAGTGTCGAAGGTCG+TGG | - | chr5.2:19178635-19178654 | MS.gene028006:intron | 50.0% |
| !! | CAGCGCCATTGACTGTTTTC+CGG | + | chr5.2:19174627-19174646 | None:intergenic | 50.0% |
| !! | GTTCTAAGAGAGGGGTTGGT+GGG | - | chr5.2:19174786-19174805 | MS.gene028006:intron | 50.0% |
| AAGGCCAGAAGCCACACCTT+TGG | - | chr5.2:19177425-19177444 | MS.gene028006:intron | 55.0% | |
| AGGCCAGCAACTAAAGCTGC+AGG | - | chr5.2:19177235-19177254 | MS.gene028006:intron | 55.0% | |
| CGTAAACCGGTGTCTGTGAC+CGG | + | chr5.2:19174550-19174569 | None:intergenic | 55.0% | |
| GAGATGTGGGATGCACTTGC+TGG | - | chr5.2:19174842-19174861 | MS.gene028006:intron | 55.0% | |
| GGCAGACTTCCATCAGGAAG+TGG | + | chr5.2:19176370-19176389 | None:intergenic | 55.0% | |
| GGCCAGCAACTAAAGCTGCA+GGG | - | chr5.2:19177236-19177255 | MS.gene028006:intron | 55.0% | |
| GGTCTGGGAAGAAGGAGAAG+AGG | - | chr5.2:19174717-19174736 | MS.gene028006:intron | 55.0% | |
| GGTTCCTTACAGGAGGCCAT+CGG | - | chr5.2:19177110-19177129 | MS.gene028006:intron | 55.0% | |
| GTAAACCGGTGTCTGTGACC+GGG | + | chr5.2:19174549-19174568 | None:intergenic | 55.0% | |
| TACGATGAACCGCGTTCTCC+TGG | - | chr5.2:19175692-19175711 | MS.gene028006:CDS | 55.0% | |
| TGCCCCCATTCTCACACTCA+CGG | + | chr5.2:19178275-19178294 | None:intergenic | 55.0% | |
| TGGAGGAGGAAGATGAAGGG+AGG | - | chr5.2:19174669-19174688 | MS.gene028006:intron | 55.0% | |
| TGGCTTGAGCCACTTCCTGA+TGG | - | chr5.2:19176358-19176377 | MS.gene028006:intron | 55.0% | |
| TTACTAGGCCGAGGAAGGTG+AGG | - | chr5.2:19175985-19176004 | MS.gene028006:intron | 55.0% | |
| TTGCCTGGAAGACGACTCTC+CGG | + | chr5.2:19177397-19177416 | None:intergenic | 55.0% | |
| ! | AATGGGGGCATATGCCAGCA+GGG | - | chr5.2:19178285-19178304 | MS.gene028006:CDS | 55.0% |
| ! | TCGTCGAGTTGTTGTGGCTC+CGG | + | chr5.2:19174488-19174507 | None:intergenic | 55.0% |
| ! | TGGCCTTGATGCATGTTGCC+TGG | + | chr5.2:19177412-19177431 | None:intergenic | 55.0% |
| !! | AGAGGGGTTGGTGGGAAAAG+TGG | - | chr5.2:19174794-19174813 | MS.gene028006:intron | 55.0% |
| !! | GAGGGGTTGGTGGGAAAAGT+GGG | - | chr5.2:19174795-19174814 | MS.gene028006:intron | 55.0% |
| !! | GAGTGTCGAAGGTCGTGGTA+TGG | - | chr5.2:19178640-19178659 | MS.gene028006:intron | 55.0% |
| !! | GGTGGTTCTAAGAGAGGGGT+TGG | - | chr5.2:19174782-19174801 | MS.gene028006:intron | 55.0% |
| !! | GGTTCTAAGAGAGGGGTTGG+TGG | - | chr5.2:19174785-19174804 | MS.gene028006:intron | 55.0% |
| !! | TTAACCTGTGGAGCATCGCC+AGG | + | chr5.2:19175713-19175732 | None:intergenic | 55.0% |
| ACAGTCAATGGCGCTGCCAC+CGG | - | chr5.2:19174631-19174650 | MS.gene028006:intron | 60.0% | |
| ATCCGACGGCGAAGGATCAC+CGG | - | chr5.2:19174466-19174485 | MS.gene028006:intron | 60.0% | |
| GAAGACGACTCTCCGGACCT+AGG | + | chr5.2:19177390-19177409 | None:intergenic | 60.0% | |
| GACGTACAATCCGACGGCGA+AGG | - | chr5.2:19174458-19174477 | MS.gene028006:intron | 60.0% | |
| GGAAGGTGGGTCTGGGAAGA+AGG | - | chr5.2:19174709-19174728 | MS.gene028006:intron | 60.0% | |
| TTCTCCTGGCGATGCTCCAC+AGG | - | chr5.2:19175706-19175725 | MS.gene028006:CDS | 60.0% | |
| ! | GAATGGGGGCATATGCCAGC+AGG | - | chr5.2:19178284-19178303 | MS.gene028006:CDS | 60.0% |
| CTCCGGTGATCCTTCGCCGT+CGG | + | chr5.2:19174471-19174490 | None:intergenic | 65.0% | |
| GGTCCGGAGAGTCGTCTTCC+AGG | - | chr5.2:19177391-19177410 | MS.gene028006:intron | 65.0% | |
| TCGTGCCCGGTCACAGACAC+CGG | - | chr5.2:19174541-19174560 | MS.gene028006:intron | 65.0% | |
| !! | GGAGCATCGCCAGGAGAACG+CGG | + | chr5.2:19175704-19175723 | None:intergenic | 65.0% |
| AATGGCGCTGCCACCGGAGC+TGG | - | chr5.2:19174637-19174656 | MS.gene028006:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 19174309 | 19178676 | 19174309 | ID=MS.gene028006 |
| chr5.2 | mRNA | 19174309 | 19178676 | 19174309 | ID=MS.gene028006.t1;Parent=MS.gene028006 |
| chr5.2 | exon | 19178657 | 19178676 | 19178657 | ID=MS.gene028006.t1.exon1;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19178657 | 19178676 | 19178657 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19178111 | 19178567 | 19178111 | ID=MS.gene028006.t1.exon2;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19178111 | 19178567 | 19178111 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19177258 | 19177371 | 19177258 | ID=MS.gene028006.t1.exon3;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19177258 | 19177371 | 19177258 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19176773 | 19176993 | 19176773 | ID=MS.gene028006.t1.exon4;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19176773 | 19176993 | 19176773 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19176553 | 19176682 | 19176553 | ID=MS.gene028006.t1.exon5;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19176553 | 19176682 | 19176553 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19176401 | 19176463 | 19176401 | ID=MS.gene028006.t1.exon6;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19176401 | 19176463 | 19176401 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19176212 | 19176289 | 19176212 | ID=MS.gene028006.t1.exon7;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19176212 | 19176289 | 19176212 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19175846 | 19175937 | 19175846 | ID=MS.gene028006.t1.exon8;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19175846 | 19175937 | 19175846 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19175686 | 19175748 | 19175686 | ID=MS.gene028006.t1.exon9;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19175686 | 19175748 | 19175686 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19175449 | 19175599 | 19175449 | ID=MS.gene028006.t1.exon10;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19175449 | 19175599 | 19175449 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| chr5.2 | exon | 19174309 | 19174407 | 19174309 | ID=MS.gene028006.t1.exon11;Parent=MS.gene028006.t1 |
| chr5.2 | CDS | 19174309 | 19174407 | 19174309 | ID=cds.MS.gene028006.t1;Parent=MS.gene028006.t1 |
| Gene Sequence |
| Protein sequence |
