AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028203

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028203.t1 MTR_2g035730 69.919 123 8 2 27 149 1 94 2.55e-48 156
MS.gene028203.t1 MTR_1g023660 56.604 106 46 0 175 280 235 340 2.54e-42 148
MS.gene028203.t1 MTR_8g099780 53.846 104 48 0 177 280 209 312 4.13e-40 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028203.t1 AT2G01930 54.882 297 103 10 1 280 1 283 5.03e-97 286
MS.gene028203.t1 AT2G01930 54.882 297 103 10 1 280 1 283 5.03e-97 286
MS.gene028203.t1 AT1G14685 51.342 298 108 11 1 280 1 279 2.08e-88 265
MS.gene028203.t1 AT1G14685 51.342 298 108 11 1 280 1 279 2.08e-88 265
MS.gene028203.t1 AT1G14685 51.342 298 108 11 1 280 1 279 2.08e-88 265
MS.gene028203.t1 AT1G14685 51.342 298 108 11 1 280 1 279 2.08e-88 265
MS.gene028203.t1 AT1G68120 47.079 291 121 9 1 280 1 269 3.58e-75 231
MS.gene028203.t1 AT2G35550 47.159 176 81 2 108 280 60 226 5.02e-50 165
MS.gene028203.t1 AT2G35550 47.159 176 81 2 108 280 60 226 5.02e-50 165
MS.gene028203.t1 AT2G35550 47.159 176 81 2 108 280 60 226 5.02e-50 165
MS.gene028203.t1 AT2G35550 47.159 176 81 2 108 280 105 271 8.52e-50 166
MS.gene028203.t1 AT5G42520 56.190 105 45 1 177 280 178 282 1.25e-39 139
MS.gene028203.t1 AT5G42520 56.190 105 45 1 177 280 234 338 2.75e-39 140
MS.gene028203.t1 AT5G42520 56.190 105 45 1 177 280 238 342 3.66e-39 140
MS.gene028203.t1 AT2G21240 52.885 104 49 0 177 280 193 296 4.30e-39 139
MS.gene028203.t1 AT2G21240 52.885 104 49 0 177 280 193 296 4.30e-39 139
MS.gene028203.t1 AT4G38910 51.485 101 49 0 180 280 158 258 5.78e-38 134
MS.gene028203.t1 AT4G38910 51.485 101 49 0 180 280 183 283 1.01e-37 134

Find 84 sgRNAs with CRISPR-Local

Find 98 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCGGCTTCCTGGGCTTCT+TGG 0.176884 4.2:+16244481 None:intergenic
GCTATCATCCTTCGGCTTCC+TGG 0.179821 4.2:+16244472 None:intergenic
TCTGGAAGAACAGCATAATT+TGG 0.201472 4.2:+16244653 None:intergenic
GGAATTGAAATGGACATTTC+TGG 0.204966 4.2:-16244392 MS.gene028203:CDS
TTCCTGGGCTTCTTGGCTTC+TGG 0.298946 4.2:+16244488 None:intergenic
GCCACGAGATTGTGCTGTTT+CGG 0.312141 4.2:-16244756 MS.gene028203:CDS
CTTTGCCGATGAGCATAAAA+AGG 0.358237 4.2:-16244262 MS.gene028203:CDS
AGCGAAGAAAAGGAAGTCTA+AGG 0.361093 4.2:-16244525 MS.gene028203:CDS
TTAACTATGTGAGGGATAAC+TGG 0.365336 4.2:-16244718 MS.gene028203:CDS
TTCTCATTTCTTGATGCATC+AGG 0.365722 4.2:+16244593 None:intergenic
GAGAGTGATTGTGATGCTTC+TGG 0.377872 4.2:+16244635 None:intergenic
ATCACAATCACTCTCCTTGC+CGG 0.381788 4.2:-16244627 MS.gene028203:CDS
ATCGCTGGGGCGTTGGAGGC+TGG 0.384018 4.2:-16244322 MS.gene028203:CDS
TGAAATCAATGGAATTGAAA+TGG 0.399496 4.2:-16244402 MS.gene028203:CDS
AGGCGTGGTGCAAGGATAGC+TGG 0.400781 4.2:-16244242 MS.gene028203:CDS
GCATCAGGCTGCGGTATAAC+CGG 0.400929 4.2:+16244608 None:intergenic
TGTTATCGCTGGGGCGTTGG+AGG 0.403737 4.2:-16244326 MS.gene028203:CDS
GCTATGATTGGAAGTGCAAA+TGG 0.413501 4.2:-16244794 MS.gene028203:CDS
CTATTGATCTGAAGACTCAT+TGG 0.414033 4.2:-16244145 MS.gene028203:CDS
TCCTCAGCAGTGTTATCGCT+GGG 0.415958 4.2:-16244336 MS.gene028203:CDS
CTATCATCCTTCGGCTTCCT+GGG 0.424580 4.2:+16244473 None:intergenic
TCAAGTGCCAAAGTCTTCTT+CGG 0.439736 4.2:+16244422 None:intergenic
GTTCCAGTTTGTTCTTGCAC+TGG 0.441790 4.2:-16244362 MS.gene028203:CDS
TTCCAGTTTGTTCTTGCACT+GGG 0.445134 4.2:-16244361 MS.gene028203:CDS
TTCCCAGTGCAAGAACAAAC+TGG 0.448442 4.2:+16244359 None:intergenic
TATTGATAAACCTATGTCTC+GGG 0.452192 4.2:+16244690 None:intergenic
CAGTGTTATCGCTGGGGCGT+TGG 0.461534 4.2:-16244329 MS.gene028203:CDS
TCTGATAGTGACAAACTTGT+TGG 0.463051 4.2:+16244109 None:intergenic
GGGTTCATAGTAACCCCAAT+TGG 0.466238 4.2:+16244901 None:intergenic
ATCCTCAGCAGTGTTATCGC+TGG 0.466509 4.2:-16244337 MS.gene028203:CDS
TGAAGAATTGAGTGTTAAGA+AGG 0.467743 4.2:-16244558 MS.gene028203:CDS
ATGTGCTGAATATGCCCAAT+TGG 0.468228 4.2:-16244916 MS.gene028203:CDS
CTCCAGAAGCCAAGAAGCCC+AGG 0.470675 4.2:-16244490 MS.gene028203:CDS
GTTACTATGAACCCTTCAAA+GGG 0.480237 4.2:-16244892 MS.gene028203:CDS
AAGGTGGCAAAGCGAAGAAA+AGG 0.482686 4.2:-16244535 MS.gene028203:CDS
GGTCGTGATCCAGCTATGAT+TGG 0.485066 4.2:-16244806 MS.gene028203:CDS
TTTCTTGATGCATCAGGCTG+CGG 0.490246 4.2:+16244599 None:intergenic
AGGATAAATTGACACATTTG+TGG 0.492724 4.2:+16244283 None:intergenic
TTTGCACTTCCAATCATAGC+TGG 0.492950 4.2:+16244797 None:intergenic
GTGCAAGAACAAACTGGAAC+TGG 0.493288 4.2:+16244365 None:intergenic
ATCTCGTGGCTGAAAGGGCA+AGG 0.493413 4.2:+16244769 None:intergenic
AGCACAATCTCGTGGCTGAA+AGG 0.494131 4.2:+16244763 None:intergenic
TTATCCCTCACATAGTTAAA+CGG 0.497017 4.2:+16244722 None:intergenic
GGTTACTATGAACCCTTCAA+AGG 0.497230 4.2:-16244893 MS.gene028203:CDS
ACTTTGGCACTTGAAATCAA+TGG 0.500357 4.2:-16244413 MS.gene028203:CDS
GTTTCACGATCATTCATGGC+AGG 0.511266 4.2:+16244845 None:intergenic
GGTTCATAGTAACCCCAATT+GGG 0.512276 4.2:+16244902 None:intergenic
GAAACACTGCTATCATCCTT+CGG 0.515134 4.2:+16244464 None:intergenic
TGTGCTGAATATGCCCAATT+GGG 0.516384 4.2:-16244915 MS.gene028203:CDS
GCACAATCTCGTGGCTGAAA+GGG 0.516986 4.2:+16244764 None:intergenic
TATTGATCTGAAGACTCATT+GGG 0.517362 4.2:-16244144 MS.gene028203:CDS
GGGCTTCTTGGCTTCTGGAG+TGG 0.517638 4.2:+16244493 None:intergenic
ATATTGATAAACCTATGTCT+CGG 0.524517 4.2:+16244689 None:intergenic
GAATTGAGTGTTAAGAAGGA+AGG 0.526010 4.2:-16244554 MS.gene028203:CDS
GGCGTGGTGCAAGGATAGCT+GGG 0.537643 4.2:-16244241 MS.gene028203:CDS
GAAACCACCGAAGAAGACTT+TGG 0.547799 4.2:-16244429 MS.gene028203:CDS
ACTGGATGACCCCGAGACAT+AGG 0.551501 4.2:-16244700 MS.gene028203:CDS
CAAGAAGCCCAGGAAGCCGA+AGG 0.555978 4.2:-16244480 MS.gene028203:CDS
TTGAGTGTTAAGAAGGAAGG+TGG 0.573084 4.2:-16244551 MS.gene028203:CDS
TACTATGAACCCTTCAAAGG+GGG 0.578585 4.2:-16244890 MS.gene028203:CDS
CTATGATTGGAAGTGCAAAT+GGG 0.579589 4.2:-16244793 MS.gene028203:CDS
CTACTCCGTTTAACTATGTG+AGG 0.583386 4.2:-16244727 MS.gene028203:CDS
GCGAAGAAAAGGAAGTCTAA+GGG 0.589646 4.2:-16244524 MS.gene028203:CDS
AGTGCCAAAGTCTTCTTCGG+TGG 0.589946 4.2:+16244425 None:intergenic
ATCATAGCTGGATCACGACC+AGG 0.593440 4.2:+16244809 None:intergenic
GATAGCAGTGTTTCAGCTCA+AGG 0.596315 4.2:-16244455 MS.gene028203:CDS
CTGGGAGGAAAATGAGCCGA+GGG 0.596548 4.2:-16244223 MS.gene028203:CDS
TCTCGTGGCTGAAAGGGCAA+GGG 0.616671 4.2:+16244770 None:intergenic
AAGACTCATTGGGCTAGACA+TGG 0.622877 4.2:-16244134 MS.gene028203:CDS
AGGCTGCGGTATAACCGGCA+AGG 0.642668 4.2:+16244613 None:intergenic
TGCATCAAGAAATGAGAATG+TGG 0.643643 4.2:-16244588 MS.gene028203:CDS
TCCGAAACAGCACAATCTCG+TGG 0.644189 4.2:+16244755 None:intergenic
TACTCCGTTTAACTATGTGA+GGG 0.653092 4.2:-16244726 MS.gene028203:CDS
GATCATTCATGGCAGGCATG+AGG 0.655695 4.2:+16244852 None:intergenic
GGACCTTCTTAAAAGCCCCT+CGG 0.664989 4.2:+16244207 None:intergenic
ATTGATAAACCTATGTCTCG+GGG 0.666123 4.2:+16244691 None:intergenic
CCCCAGCGATAACACTGCTG+AGG 0.669056 4.2:+16244335 None:intergenic
GCTGGGAGGAAAATGAGCCG+AGG 0.673676 4.2:-16244224 MS.gene028203:CDS
ACTATGAACCCTTCAAAGGG+GGG 0.673810 4.2:-16244889 MS.gene028203:CDS
CCTCAGCAGTGTTATCGCTG+GGG 0.675510 4.2:-16244335 MS.gene028203:CDS
GTGCTGAATATGCCCAATTG+GGG 0.693408 4.2:-16244914 MS.gene028203:CDS
TTACTATGAACCCTTCAAAG+GGG 0.698365 4.2:-16244891 MS.gene028203:CDS
TGGGAGGAAAATGAGCCGAG+GGG 0.729606 4.2:-16244222 MS.gene028203:CDS
GTGGTGCAAGGATAGCTGGG+AGG 0.770772 4.2:-16244238 MS.gene028203:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ATATTGATAAACCTATGTCT+CGG + chr4.2:16244346-16244365 None:intergenic 25.0%
! TGAAATCAATGGAATTGAAA+TGG - chr4.2:16244630-16244649 MS.gene028203:CDS 25.0%
AGGATAAATTGACACATTTG+TGG + chr4.2:16244752-16244771 None:intergenic 30.0%
TATTGATAAACCTATGTCTC+GGG + chr4.2:16244345-16244364 None:intergenic 30.0%
TATTGATCTGAAGACTCATT+GGG - chr4.2:16244888-16244907 MS.gene028203:CDS 30.0%
TGAAGAATTGAGTGTTAAGA+AGG - chr4.2:16244474-16244493 MS.gene028203:CDS 30.0%
TTATCCCTCACATAGTTAAA+CGG + chr4.2:16244313-16244332 None:intergenic 30.0%
!! TTTTGTTTCACGATCATTCA+TGG + chr4.2:16244194-16244213 None:intergenic 30.0%
!!! GAAACAAAACCATTTTTTCC+TGG - chr4.2:16244205-16244224 MS.gene028203:CDS 30.0%
ACTTTGGCACTTGAAATCAA+TGG - chr4.2:16244619-16244638 MS.gene028203:CDS 35.0%
ATTGATAAACCTATGTCTCG+GGG + chr4.2:16244344-16244363 None:intergenic 35.0%
CTATTGATCTGAAGACTCAT+TGG - chr4.2:16244887-16244906 MS.gene028203:CDS 35.0%
GAATTGAGTGTTAAGAAGGA+AGG - chr4.2:16244478-16244497 MS.gene028203:CDS 35.0%
GGAATTGAAATGGACATTTC+TGG - chr4.2:16244640-16244659 MS.gene028203:CDS 35.0%
GTTACTATGAACCCTTCAAA+GGG - chr4.2:16244140-16244159 MS.gene028203:CDS 35.0%
TACTCCGTTTAACTATGTGA+GGG - chr4.2:16244306-16244325 MS.gene028203:CDS 35.0%
TCTGGAAGAACAGCATAATT+TGG + chr4.2:16244382-16244401 None:intergenic 35.0%
TGCATCAAGAAATGAGAATG+TGG - chr4.2:16244444-16244463 MS.gene028203:CDS 35.0%
TTAACTATGTGAGGGATAAC+TGG - chr4.2:16244314-16244333 MS.gene028203:CDS 35.0%
TTACTATGAACCCTTCAAAG+GGG - chr4.2:16244141-16244160 MS.gene028203:CDS 35.0%
TTCTCATTTCTTGATGCATC+AGG + chr4.2:16244442-16244461 None:intergenic 35.0%
! CTATGATTGGAAGTGCAAAT+GGG - chr4.2:16244239-16244258 MS.gene028203:CDS 35.0%
! TCTGATAGTGACAAACTTGT+TGG + chr4.2:16244926-16244945 None:intergenic 35.0%
AGCGAAGAAAAGGAAGTCTA+AGG - chr4.2:16244507-16244526 MS.gene028203:CDS 40.0%
ATGTGCTGAATATGCCCAAT+TGG - chr4.2:16244116-16244135 MS.gene028203:CDS 40.0%
CTACTCCGTTTAACTATGTG+AGG - chr4.2:16244305-16244324 MS.gene028203:CDS 40.0%
CTTTGCCGATGAGCATAAAA+AGG - chr4.2:16244770-16244789 MS.gene028203:CDS 40.0%
GAAACACTGCTATCATCCTT+CGG + chr4.2:16244571-16244590 None:intergenic 40.0%
GCGAAGAAAAGGAAGTCTAA+GGG - chr4.2:16244508-16244527 MS.gene028203:CDS 40.0%
GGTTACTATGAACCCTTCAA+AGG - chr4.2:16244139-16244158 MS.gene028203:CDS 40.0%
GGTTCATAGTAACCCCAATT+GGG + chr4.2:16244133-16244152 None:intergenic 40.0%
TACTATGAACCCTTCAAAGG+GGG - chr4.2:16244142-16244161 MS.gene028203:CDS 40.0%
TCAAGTGCCAAAGTCTTCTT+CGG + chr4.2:16244613-16244632 None:intergenic 40.0%
TGTGCTGAATATGCCCAATT+GGG - chr4.2:16244117-16244136 MS.gene028203:CDS 40.0%
TTGAGTGTTAAGAAGGAAGG+TGG - chr4.2:16244481-16244500 MS.gene028203:CDS 40.0%
TTTGCACTTCCAATCATAGC+TGG + chr4.2:16244238-16244257 None:intergenic 40.0%
! CTTTTTATGCTCATCGGCAA+AGG + chr4.2:16244772-16244791 None:intergenic 40.0%
! GCTATGATTGGAAGTGCAAA+TGG - chr4.2:16244238-16244257 MS.gene028203:CDS 40.0%
! TTCCAGTTTGTTCTTGCACT+GGG - chr4.2:16244671-16244690 MS.gene028203:CDS 40.0%
AAGGTGGCAAAGCGAAGAAA+AGG - chr4.2:16244497-16244516 MS.gene028203:CDS 45.0%
ACTATGAACCCTTCAAAGGG+GGG - chr4.2:16244143-16244162 MS.gene028203:CDS 45.0%
ATCACAATCACTCTCCTTGC+CGG - chr4.2:16244405-16244424 MS.gene028203:CDS 45.0%
GAAACCACCGAAGAAGACTT+TGG - chr4.2:16244603-16244622 MS.gene028203:CDS 45.0%
GAGAGTGATTGTGATGCTTC+TGG + chr4.2:16244400-16244419 None:intergenic 45.0%
GATAGCAGTGTTTCAGCTCA+AGG - chr4.2:16244577-16244596 MS.gene028203:CDS 45.0%
GGATCACGACCAGGAAAAAA+TGG + chr4.2:16244217-16244236 None:intergenic 45.0%
GGGTTCATAGTAACCCCAAT+TGG + chr4.2:16244134-16244153 None:intergenic 45.0%
GTGCAAGAACAAACTGGAAC+TGG + chr4.2:16244670-16244689 None:intergenic 45.0%
GTGCTGAATATGCCCAATTG+GGG - chr4.2:16244118-16244137 MS.gene028203:CDS 45.0%
GTTTCACGATCATTCATGGC+AGG + chr4.2:16244190-16244209 None:intergenic 45.0%
TTCCCAGTGCAAGAACAAAC+TGG + chr4.2:16244676-16244695 None:intergenic 45.0%
TTTCTTGATGCATCAGGCTG+CGG + chr4.2:16244436-16244455 None:intergenic 45.0%
! AAGACTCATTGGGCTAGACA+TGG - chr4.2:16244898-16244917 MS.gene028203:CDS 45.0%
! CCACGCCTTTTTATGCTCAT+CGG + chr4.2:16244778-16244797 None:intergenic 45.0%
! CTTCAGCAGCAAGTTTTTCC+AGG + chr4.2:16244849-16244868 None:intergenic 45.0%
! GTTCCAGTTTGTTCTTGCAC+TGG - chr4.2:16244670-16244689 MS.gene028203:CDS 45.0%
!! CTGGAAAAACTTGCTGCTGA+AGG - chr4.2:16244847-16244866 MS.gene028203:CDS 45.0%
AGCACAATCTCGTGGCTGAA+AGG + chr4.2:16244272-16244291 None:intergenic 50.0%
AGTGCCAAAGTCTTCTTCGG+TGG + chr4.2:16244610-16244629 None:intergenic 50.0%
ATCATAGCTGGATCACGACC+AGG + chr4.2:16244226-16244245 None:intergenic 50.0%
ATCCTCAGCAGTGTTATCGC+TGG - chr4.2:16244695-16244714 MS.gene028203:CDS 50.0%
CCGATGAGCATAAAAAGGCG+TGG - chr4.2:16244775-16244794 MS.gene028203:CDS 50.0%
CTATCATCCTTCGGCTTCCT+GGG + chr4.2:16244562-16244581 None:intergenic 50.0%
GATCATTCATGGCAGGCATG+AGG + chr4.2:16244183-16244202 None:intergenic 50.0%
GCACAATCTCGTGGCTGAAA+GGG + chr4.2:16244271-16244290 None:intergenic 50.0%
GGACCTTCTTAAAAGCCCCT+CGG + chr4.2:16244828-16244847 None:intergenic 50.0%
GGTCGTGATCCAGCTATGAT+TGG - chr4.2:16244226-16244245 MS.gene028203:CDS 50.0%
TCCGAAACAGCACAATCTCG+TGG + chr4.2:16244280-16244299 None:intergenic 50.0%
TCCTCAGCAGTGTTATCGCT+GGG - chr4.2:16244696-16244715 MS.gene028203:CDS 50.0%
! GCATAAAAAGGCGTGGTGCA+AGG - chr4.2:16244782-16244801 MS.gene028203:CDS 50.0%
!! AGGGGCTTTTAAGAAGGTCC+TGG - chr4.2:16244828-16244847 MS.gene028203:CDS 50.0%
!! GCCACGAGATTGTGCTGTTT+CGG - chr4.2:16244276-16244295 MS.gene028203:CDS 50.0%
ACCGAGATTCCCCCCTTTGA+AGG + chr4.2:16244155-16244174 None:intergenic 55.0%
ACTGGATGACCCCGAGACAT+AGG - chr4.2:16244332-16244351 MS.gene028203:CDS 55.0%
ATCTCGTGGCTGAAAGGGCA+AGG + chr4.2:16244266-16244285 None:intergenic 55.0%
CCCTTCAAAGGGGGGAATCT+CGG - chr4.2:16244151-16244170 MS.gene028203:CDS 55.0%
CCGAGATTCCCCCCTTTGAA+GGG + chr4.2:16244154-16244173 None:intergenic 55.0%
CCTCAGCAGTGTTATCGCTG+GGG - chr4.2:16244697-16244716 MS.gene028203:CDS 55.0%
CTGGGAGGAAAATGAGCCGA+GGG - chr4.2:16244809-16244828 MS.gene028203:CDS 55.0%
GCATCAGGCTGCGGTATAAC+CGG + chr4.2:16244427-16244446 None:intergenic 55.0%
GCTATCATCCTTCGGCTTCC+TGG + chr4.2:16244563-16244582 None:intergenic 55.0%
TCTCGTGGCTGAAAGGGCAA+GGG + chr4.2:16244265-16244284 None:intergenic 55.0%
TGGGAGGAAAATGAGCCGAG+GGG - chr4.2:16244810-16244829 MS.gene028203:CDS 55.0%
TTCCTGGGCTTCTTGGCTTC+TGG + chr4.2:16244547-16244566 None:intergenic 55.0%
!! GAGCCGAGGGGCTTTTAAGA+AGG - chr4.2:16244822-16244841 MS.gene028203:CDS 55.0%
AGGCGTGGTGCAAGGATAGC+TGG - chr4.2:16244790-16244809 MS.gene028203:CDS 60.0%
AGGCTGCGGTATAACCGGCA+AGG + chr4.2:16244422-16244441 None:intergenic 60.0%
CAAGAAGCCCAGGAAGCCGA+AGG - chr4.2:16244552-16244571 MS.gene028203:CDS 60.0%
CAGTGTTATCGCTGGGGCGT+TGG - chr4.2:16244703-16244722 MS.gene028203:CDS 60.0%
CCCCAGCGATAACACTGCTG+AGG + chr4.2:16244700-16244719 None:intergenic 60.0%
CTCCAGAAGCCAAGAAGCCC+AGG - chr4.2:16244542-16244561 MS.gene028203:CDS 60.0%
CTTCGGCTTCCTGGGCTTCT+TGG + chr4.2:16244554-16244573 None:intergenic 60.0%
GCTGGGAGGAAAATGAGCCG+AGG - chr4.2:16244808-16244827 MS.gene028203:CDS 60.0%
GGCGTGGTGCAAGGATAGCT+GGG - chr4.2:16244791-16244810 MS.gene028203:CDS 60.0%
GTGGTGCAAGGATAGCTGGG+AGG - chr4.2:16244794-16244813 MS.gene028203:CDS 60.0%
! GGGCTTCTTGGCTTCTGGAG+TGG + chr4.2:16244542-16244561 None:intergenic 60.0%
!! TGTTATCGCTGGGGCGTTGG+AGG - chr4.2:16244706-16244725 MS.gene028203:CDS 60.0%
!! ATCGCTGGGGCGTTGGAGGC+TGG - chr4.2:16244710-16244729 MS.gene028203:CDS 70.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 16244106 16244948 16244106 ID=MS.gene028203
chr4.2 mRNA 16244106 16244948 16244106 ID=MS.gene028203.t1;Parent=MS.gene028203
chr4.2 exon 16244106 16244948 16244106 ID=MS.gene028203.t1.exon1;Parent=MS.gene028203.t1
chr4.2 CDS 16244106 16244948 16244106 ID=cds.MS.gene028203.t1;Parent=MS.gene028203.t1
Gene Sequence

>MS.gene028203

ATGGATGATGATGTGCTGAATATGCCCAATTGGGGTTACTATGAACCCTTCAAAGGGGGGAATCTCGGTCTGAACCTCATGCCTGCCATGAATGATCGTGAAACAAAACCATTTTTTCCTGGTCGTGATCCAGCTATGATTGGAAGTGCAAATGGGCCCTTGCCCTTTCAGCCACGAGATTGTGCTGTTTCGGAGTCTGCTACTCCGTTTAACTATGTGAGGGATAACTGGATGACCCCGAGACATAGGTTTATCAATATGCAGCTGACAAATCCAAATTATGCTGTTCTTCCAGAAGCATCACAATCACTCTCCTTGCCGGTTATACCGCAGCCTGATGCATCAAGAAATGAGAATGTGGAGAATGCTGAAGAATTGAGTGTTAAGAAGGAAGGTGGCAAAGCGAAGAAAAGGAAGTCTAAGGGTGCTGTTACCACTCCAGAAGCCAAGAAGCCCAGGAAGCCGAAGGATGATAGCAGTGTTTCAGCTCAAGGTGTGAAACCACCGAAGAAGACTTTGGCACTTGAAATCAATGGAATTGAAATGGACATTTCTGGTCTACCAGTTCCAGTTTGTTCTTGCACTGGGAATCCTCAGCAGTGTTATCGCTGGGGCGTTGGAGGCTGGCAATCAGCTTGCTGTACCACAAATGTGTCAATTTATCCTTTGCCGATGAGCATAAAAAGGCGTGGTGCAAGGATAGCTGGGAGGAAAATGAGCCGAGGGGCTTTTAAGAAGGTCCTGGAAAAACTTGCTGCTGAAGGTTATAATTTTGCTAATGCTATTGATCTGAAGACTCATTGGGCTAGACATGGCACCAACAAGTTTGTCACTATCAGATAG
Protein sequence

>MS.gene028203.t1

MDDDVLNMPNWGYYEPFKGGNLGLNLMPAMNDRETKPFFPGRDPAMIGSANGPLPFQPRDCAVSESATPFNYVRDNWMTPRHRFINMQLTNPNYAVLPEASQSLSLPVIPQPDASRNENVENAEELSVKKEGGKAKKRKSKGAVTTPEAKKPRKPKDDSSVSAQGVKPPKKTLALEINGIEMDISGLPVPVCSCTGNPQQCYRWGVGGWQSACCTTNVSIYPLPMSIKRRGARIAGRKMSRGAFKKVLEKLAAEGYNFANAIDLKTHWARHGTNKFVTIR