Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028214.t1 | RHN42300.1 | 96.5 | 403 | 13 | 1 | 1 | 403 | 1 | 402 | 3.30E-208 | 734.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028214.t1 | Q9ZUM9 | 56.5 | 405 | 145 | 9 | 2 | 389 | 7 | 397 | 4.5e-105 | 382.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028214.t1 | A0A396GMN6 | 96.5 | 403 | 13 | 1 | 1 | 403 | 1 | 402 | 2.4e-208 | 734.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene028214.t1 | TR | SET |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028214.t1 | MTR_5g027020 | 48.711 | 388 | 151 | 9 | 5 | 384 | 7 | 354 | 2.38e-123 | 361 |
MS.gene028214.t1 | MTR_1g038390 | 61.940 | 134 | 39 | 4 | 213 | 345 | 4 | 126 | 2.18e-40 | 140 |
MS.gene028214.t1 | MTR_3g073000 | 25.857 | 321 | 186 | 11 | 8 | 313 | 13 | 296 | 5.22e-18 | 85.5 |
MS.gene028214.t1 | MTR_3g073000 | 25.857 | 321 | 186 | 11 | 8 | 313 | 13 | 296 | 7.26e-18 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028214.t1 | AT2G19640 | 52.696 | 408 | 156 | 10 | 2 | 389 | 7 | 397 | 1.41e-136 | 396 |
MS.gene028214.t1 | AT2G19640 | 55.272 | 313 | 111 | 8 | 2 | 299 | 7 | 305 | 1.64e-110 | 328 |
MS.gene028214.t1 | AT2G17900 | 25.589 | 297 | 174 | 11 | 8 | 291 | 18 | 280 | 3.60e-15 | 77.4 |
Find 72 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AAAGAAGAGTGATGAGAAAA+AGG | 0.178869 | 4.2:+16460153 | None:intergenic |
AAAGATAAGCTTAATGCTTT+TGG | 0.201202 | 4.2:-16459745 | MS.gene028214:CDS |
GGAGAATGAAGAAGAGGATA+TGG | 0.278011 | 4.2:-16459365 | MS.gene028214:CDS |
AATAGGTCTGTTAGAGCTTA+TGG | 0.303956 | 4.2:-16459691 | MS.gene028214:CDS |
TTTGCTGCTTCATCATTATC+AGG | 0.305057 | 4.2:+16459853 | None:intergenic |
TCTCTGAAACTGATGAAAAT+AGG | 0.345771 | 4.2:-16459708 | MS.gene028214:CDS |
GGAGGAGCAATGTGAAAATA+TGG | 0.349748 | 4.2:-16459320 | MS.gene028214:CDS |
AAGAGATTGTTGGAAGACTA+TGG | 0.351805 | 4.2:-16459463 | MS.gene028214:CDS |
AACGAAAACAATTCATTATG+AGG | 0.359381 | 4.2:+16459793 | None:intergenic |
TTGAATTGCAAAATCGATAT+CGG | 0.369503 | 4.2:+16460070 | None:intergenic |
GATGTAATGTTGAATCGAAT+TGG | 0.384827 | 4.2:-16459420 | MS.gene028214:CDS |
GAAGCAAAAGAGGATTGCTT+TGG | 0.410291 | 4.2:+16459983 | None:intergenic |
TAATCAAATCTACAAGCATT+AGG | 0.420326 | 4.2:+16459628 | None:intergenic |
GAAATTCAAGGTAGAGGAAG+AGG | 0.427064 | 4.2:-16460252 | MS.gene028214:CDS |
TCTACCTTCAAAACAGAACT+TGG | 0.428323 | 4.2:+16460276 | None:intergenic |
TAACAAAACTTGAAAATTTG+AGG | 0.434129 | 4.2:+16459891 | None:intergenic |
ACTTGAATGTTGATGATAAA+GGG | 0.440641 | 4.2:-16459126 | MS.gene028214:CDS |
TATGGATGATGAGGAGGAGG+AGG | 0.450793 | 4.2:-16459341 | MS.gene028214:CDS |
GACTTGAATGTTGATGATAA+AGG | 0.457168 | 4.2:-16459127 | MS.gene028214:CDS |
AGACCGGCCGCGACATCATA+AGG | 0.460613 | 4.2:+16459589 | None:intergenic |
GTATCACCTTGTGGCGGTAA+AGG | 0.461262 | 4.2:+16459205 | None:intergenic |
TGCTTGAAGTTGTCTTTCGA+GGG | 0.463012 | 4.2:+16459954 | None:intergenic |
TTAATGAAAACTATTCTAGT+AGG | 0.465091 | 4.2:-16459489 | MS.gene028214:CDS |
GGATGATGAGGAGGAGGAGG+AGG | 0.480114 | 4.2:-16459338 | MS.gene028214:CDS |
AACAAAACTTGAAAATTTGA+GGG | 0.484733 | 4.2:+16459892 | None:intergenic |
GGCTATGGATGATGAGGAGG+AGG | 0.485383 | 4.2:-16459344 | MS.gene028214:CDS |
GTGCTTGAAGTTGTCTTTCG+AGG | 0.486050 | 4.2:+16459953 | None:intergenic |
AGGGGTTGTTGAAGCAAAAG+AGG | 0.497882 | 4.2:+16459973 | None:intergenic |
TAGTAGGCAGAAGAGATTGT+TGG | 0.499496 | 4.2:-16459473 | MS.gene028214:CDS |
GTAGAGGAAATTCAAGGTAG+AGG | 0.507246 | 4.2:-16460258 | MS.gene028214:CDS |
TTGAAGGTAGAGGAAATTCA+AGG | 0.513971 | 4.2:-16460264 | MS.gene028214:CDS |
AAAATCAGTATTACTAAGAC+CGG | 0.525101 | 4.2:+16459573 | None:intergenic |
ACTGATAATGAGAGTGTTGA+AGG | 0.527867 | 4.2:-16459397 | MS.gene028214:CDS |
GCATCTCAACCTCTCAAAGC+TGG | 0.531187 | 4.2:-16460222 | MS.gene028214:CDS |
ACAAAACTTGAAAATTTGAG+GGG | 0.531312 | 4.2:+16459893 | None:intergenic |
GTGGTAGGGTAAAGGAGGAT+TGG | 0.532177 | 4.2:+16460177 | None:intergenic |
TGAAGAAGAGGATATGGCTA+TGG | 0.532611 | 4.2:-16459359 | MS.gene028214:CDS |
CCACCTTATGATGTCGCGGC+CGG | 0.533777 | 4.2:-16459592 | MS.gene028214:CDS |
TGTGTGATAGAACAAATTGC+TGG | 0.536848 | 4.2:-16459240 | MS.gene028214:CDS |
TGTGGAGGAGAATGAAGAAG+AGG | 0.542011 | 4.2:-16459371 | MS.gene028214:CDS |
TCGTTATTGTCAGTTTCTGA+TGG | 0.542245 | 4.2:+16459295 | None:intergenic |
GGATATGGCTATGGATGATG+AGG | 0.556063 | 4.2:-16459350 | MS.gene028214:CDS |
GGGATGCAATAATGTGGTGT+AGG | 0.556795 | 4.2:+16459827 | None:intergenic |
AAGCATTAGGAAGACAATCA+TGG | 0.557161 | 4.2:+16459641 | None:intergenic |
TGATACATTATCTAATGTCA+TGG | 0.566313 | 4.2:-16459188 | MS.gene028214:CDS |
TCATGATGTTCCACAAGGTA+GGG | 0.572819 | 4.2:-16459536 | MS.gene028214:CDS |
TATGGCTATGGATGATGAGG+AGG | 0.579991 | 4.2:-16459347 | MS.gene028214:CDS |
ACGAAAACAATTCATTATGA+GGG | 0.582255 | 4.2:+16459794 | None:intergenic |
TGAGAGTGTTGAAGGAAATG+TGG | 0.582356 | 4.2:-16459389 | MS.gene028214:CDS |
GTTGATGATAAAGGGCAAAG+TGG | 0.587949 | 4.2:-16459118 | MS.gene028214:CDS |
ATGATTTGACCAGCTTTGAG+AGG | 0.589051 | 4.2:+16460213 | None:intergenic |
AAGGGGTGGTAGGGTAAAGG+AGG | 0.590878 | 4.2:+16460172 | None:intergenic |
GTGTGATAGAACAAATTGCT+GGG | 0.601867 | 4.2:-16459239 | MS.gene028214:CDS |
AAACAAATCTCCCTACCTTG+TGG | 0.609840 | 4.2:+16459526 | None:intergenic |
TTAGCTCCTTTACCGCCACA+AGG | 0.628714 | 4.2:-16459211 | MS.gene028214:CDS |
TCATGGAATGTAATGTCTGT+GGG | 0.630100 | 4.2:-16459171 | MS.gene028214:CDS |
TTAGATAATGTATCACCTTG+TGG | 0.636379 | 4.2:+16459196 | None:intergenic |
GTCATGGAATGTAATGTCTG+TGG | 0.637762 | 4.2:-16459172 | MS.gene028214:CDS |
TTCATGATGTTCCACAAGGT+AGG | 0.641511 | 4.2:-16459537 | MS.gene028214:CDS |
GCTTGAAGTTGTCTTTCGAG+GGG | 0.645950 | 4.2:+16459955 | None:intergenic |
GCAAAGTGGAGAAGTTCACA+TGG | 0.648528 | 4.2:-16459104 | MS.gene028214:CDS |
TAATCCACCTTATGATGTCG+CGG | 0.663274 | 4.2:-16459596 | MS.gene028214:CDS |
GAGTGTTGAAGGAAATGTGG+AGG | 0.667098 | 4.2:-16459386 | MS.gene028214:CDS |
TCAACTCATCACATTCCACA+TGG | 0.667873 | 4.2:-16460029 | MS.gene028214:CDS |
CAAAACTTGAAAATTTGAGG+GGG | 0.669304 | 4.2:+16459894 | None:intergenic |
GGAGGATTGGTGAATCTGTG+AGG | 0.693945 | 4.2:+16460190 | None:intergenic |
ATGATTCATGATGTTCCACA+AGG | 0.697653 | 4.2:-16459541 | MS.gene028214:CDS |
CCGGCCGCGACATCATAAGG+TGG | 0.702146 | 4.2:+16459592 | None:intergenic |
GATAATGTATCACCTTGTGG+CGG | 0.702824 | 4.2:+16459199 | None:intergenic |
TAATGCTTGACAAATCCATG+TGG | 0.720035 | 4.2:+16460014 | None:intergenic |
TGTGATAGAACAAATTGCTG+GGG | 0.747351 | 4.2:-16459238 | MS.gene028214:CDS |
AAGTGGAGAAGTTCACATGG+AGG | 0.760776 | 4.2:-16459101 | MS.gene028214:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACAAAACTTGAAAATTTGA+GGG | + | chr4.2:16459492-16459511 | None:intergenic | 20.0% |
!! | TAACAAAACTTGAAAATTTG+AGG | + | chr4.2:16459493-16459512 | None:intergenic | 20.0% |
!! | TTAATGAAAACTATTCTAGT+AGG | - | chr4.2:16459892-16459911 | MS.gene028214:CDS | 20.0% |
!!! | GTAATACTGATTTTGTTATT+AGG | - | chr4.2:16459817-16459836 | MS.gene028214:CDS | 20.0% |
! | AAAATCAGTATTACTAAGAC+CGG | + | chr4.2:16459811-16459830 | None:intergenic | 25.0% |
! | AACGAAAACAATTCATTATG+AGG | + | chr4.2:16459591-16459610 | None:intergenic | 25.0% |
! | ACAAAACTTGAAAATTTGAG+GGG | + | chr4.2:16459491-16459510 | None:intergenic | 25.0% |
! | ACGAAAACAATTCATTATGA+GGG | + | chr4.2:16459590-16459609 | None:intergenic | 25.0% |
! | TAATCAAATCTACAAGCATT+AGG | + | chr4.2:16459756-16459775 | None:intergenic | 25.0% |
! | TCAAAAAGAAATAAGCATGT+GGG | + | chr4.2:16460115-16460134 | None:intergenic | 25.0% |
! | TGATACATTATCTAATGTCA+TGG | - | chr4.2:16460193-16460212 | MS.gene028214:CDS | 25.0% |
! | TTCAAAAAGAAATAAGCATG+TGG | + | chr4.2:16460116-16460135 | None:intergenic | 25.0% |
! | TTGAATTGCAAAATCGATAT+CGG | + | chr4.2:16459314-16459333 | None:intergenic | 25.0% |
!! | AAAGATAAGCTTAATGCTTT+TGG | - | chr4.2:16459636-16459655 | MS.gene028214:CDS | 25.0% |
!! | CTAGAATAGTTTTCATTAAC+AGG | + | chr4.2:16459891-16459910 | None:intergenic | 25.0% |
!!! | ACTTGAATGTTGATGATAAA+GGG | - | chr4.2:16460255-16460274 | MS.gene028214:CDS | 25.0% |
AAAAAAGGGATGCAATAATG+TGG | + | chr4.2:16459563-16459582 | None:intergenic | 30.0% | |
AAAGAAGAGTGATGAGAAAA+AGG | + | chr4.2:16459231-16459250 | None:intergenic | 30.0% | |
AAGAAGAGTGATGAGAAAAA+GGG | + | chr4.2:16459230-16459249 | None:intergenic | 30.0% | |
CAAAACTTGAAAATTTGAGG+GGG | + | chr4.2:16459490-16459509 | None:intergenic | 30.0% | |
GATGTAATGTTGAATCGAAT+TGG | - | chr4.2:16459961-16459980 | MS.gene028214:CDS | 30.0% | |
TTAGATAATGTATCACCTTG+TGG | + | chr4.2:16460188-16460207 | None:intergenic | 30.0% | |
! | TTTTCATCAGTTTCAGAGAA+AGG | + | chr4.2:16459672-16459691 | None:intergenic | 30.0% |
!! | GACTTGAATGTTGATGATAA+AGG | - | chr4.2:16460254-16460273 | MS.gene028214:CDS | 30.0% |
!! | TCTCTGAAACTGATGAAAAT+AGG | - | chr4.2:16459673-16459692 | MS.gene028214:CDS | 30.0% |
!!! | CAAGTTTTGTTATCTCTACA+AGG | - | chr4.2:16459501-16459520 | MS.gene028214:CDS | 30.0% |
AAGAGATTGTTGGAAGACTA+TGG | - | chr4.2:16459918-16459937 | MS.gene028214:CDS | 35.0% | |
AAGCATTAGGAAGACAATCA+TGG | + | chr4.2:16459743-16459762 | None:intergenic | 35.0% | |
AATAGGTCTGTTAGAGCTTA+TGG | - | chr4.2:16459690-16459709 | MS.gene028214:CDS | 35.0% | |
AGAAGAGTGATGAGAAAAAG+GGG | + | chr4.2:16459229-16459248 | None:intergenic | 35.0% | |
ATGATTCATGATGTTCCACA+AGG | - | chr4.2:16459840-16459859 | MS.gene028214:CDS | 35.0% | |
GGTTGAAAAACGAAGCATAA+GGG | + | chr4.2:16459722-16459741 | None:intergenic | 35.0% | |
GTGTGATAGAACAAATTGCT+GGG | - | chr4.2:16460142-16460161 | MS.gene028214:CDS | 35.0% | |
TAATGCTTGACAAATCCATG+TGG | + | chr4.2:16459370-16459389 | None:intergenic | 35.0% | |
TCATGGAATGTAATGTCTGT+GGG | - | chr4.2:16460210-16460229 | MS.gene028214:CDS | 35.0% | |
TCGTTATTGTCAGTTTCTGA+TGG | + | chr4.2:16460089-16460108 | None:intergenic | 35.0% | |
TCTACCTTCAAAACAGAACT+TGG | + | chr4.2:16459108-16459127 | None:intergenic | 35.0% | |
TGGTTGAAAAACGAAGCATA+AGG | + | chr4.2:16459723-16459742 | None:intergenic | 35.0% | |
TGTGATAGAACAAATTGCTG+GGG | - | chr4.2:16460143-16460162 | MS.gene028214:CDS | 35.0% | |
TGTGTGATAGAACAAATTGC+TGG | - | chr4.2:16460141-16460160 | MS.gene028214:CDS | 35.0% | |
TTGAAGGTAGAGGAAATTCA+AGG | - | chr4.2:16459117-16459136 | MS.gene028214:CDS | 35.0% | |
! | ATTATGAGGGTGCGAAAAAA+GGG | + | chr4.2:16459577-16459596 | None:intergenic | 35.0% |
! | TTTGCTGCTTCATCATTATC+AGG | + | chr4.2:16459531-16459550 | None:intergenic | 35.0% |
!! | ACTGATAATGAGAGTGTTGA+AGG | - | chr4.2:16459984-16460003 | MS.gene028214:CDS | 35.0% |
!! | TGTTCCAAGTTCTGTTTTGA+AGG | - | chr4.2:16459101-16459120 | MS.gene028214:CDS | 35.0% |
!!! | AAGTTCTGTTTTGAAGGTAG+AGG | - | chr4.2:16459107-16459126 | MS.gene028214:CDS | 35.0% |
AAACAAATCTCCCTACCTTG+TGG | + | chr4.2:16459858-16459877 | None:intergenic | 40.0% | |
AACTTGAAAATTTGAGGGGG+CGG | + | chr4.2:16459487-16459506 | None:intergenic | 40.0% | |
GAAATTCAAGGTAGAGGAAG+AGG | - | chr4.2:16459129-16459148 | MS.gene028214:CDS | 40.0% | |
GAAGCAAAAGAGGATTGCTT+TGG | + | chr4.2:16459401-16459420 | None:intergenic | 40.0% | |
GATAATGTATCACCTTGTGG+CGG | + | chr4.2:16460185-16460204 | None:intergenic | 40.0% | |
GGAGAATGAAGAAGAGGATA+TGG | - | chr4.2:16460016-16460035 | MS.gene028214:CDS | 40.0% | |
GGAGGAGCAATGTGAAAATA+TGG | - | chr4.2:16460061-16460080 | MS.gene028214:CDS | 40.0% | |
GTAGAGGAAATTCAAGGTAG+AGG | - | chr4.2:16459123-16459142 | MS.gene028214:CDS | 40.0% | |
GTCATGGAATGTAATGTCTG+TGG | - | chr4.2:16460209-16460228 | MS.gene028214:CDS | 40.0% | |
TAATCCACCTTATGATGTCG+CGG | - | chr4.2:16459785-16459804 | MS.gene028214:CDS | 40.0% | |
TAGTAGGCAGAAGAGATTGT+TGG | - | chr4.2:16459908-16459927 | MS.gene028214:CDS | 40.0% | |
TCAACTCATCACATTCCACA+TGG | - | chr4.2:16459352-16459371 | MS.gene028214:CDS | 40.0% | |
TCATGATGTTCCACAAGGTA+GGG | - | chr4.2:16459845-16459864 | MS.gene028214:CDS | 40.0% | |
TGAAGAAGAGGATATGGCTA+TGG | - | chr4.2:16460022-16460041 | MS.gene028214:CDS | 40.0% | |
TGCTTGAAGTTGTCTTTCGA+GGG | + | chr4.2:16459430-16459449 | None:intergenic | 40.0% | |
TTCATGATGTTCCACAAGGT+AGG | - | chr4.2:16459844-16459863 | MS.gene028214:CDS | 40.0% | |
! | CATTATGAGGGTGCGAAAAA+AGG | + | chr4.2:16459578-16459597 | None:intergenic | 40.0% |
!! | ATGATTTGACCAGCTTTGAG+AGG | + | chr4.2:16459171-16459190 | None:intergenic | 40.0% |
!! | GTTGATGATAAAGGGCAAAG+TGG | - | chr4.2:16460263-16460282 | MS.gene028214:CDS | 40.0% |
!! | TGAGAGTGTTGAAGGAAATG+TGG | - | chr4.2:16459992-16460011 | MS.gene028214:CDS | 40.0% |
AAAAAGGGGTGGTAGGGTAA+AGG | + | chr4.2:16459215-16459234 | None:intergenic | 45.0% | |
AAGTGGAGAAGTTCACATGG+AGG | - | chr4.2:16460280-16460299 | MS.gene028214:CDS | 45.0% | |
AGAGTGATGAGAAAAAGGGG+TGG | + | chr4.2:16459226-16459245 | None:intergenic | 45.0% | |
AGGGGTTGTTGAAGCAAAAG+AGG | + | chr4.2:16459411-16459430 | None:intergenic | 45.0% | |
GATGAGAAAAAGGGGTGGTA+GGG | + | chr4.2:16459221-16459240 | None:intergenic | 45.0% | |
GCAAAGTGGAGAAGTTCACA+TGG | - | chr4.2:16460277-16460296 | MS.gene028214:CDS | 45.0% | |
GCTTGAAGTTGTCTTTCGAG+GGG | + | chr4.2:16459429-16459448 | None:intergenic | 45.0% | |
GGATATGGCTATGGATGATG+AGG | - | chr4.2:16460031-16460050 | MS.gene028214:CDS | 45.0% | |
GGGATGCAATAATGTGGTGT+AGG | + | chr4.2:16459557-16459576 | None:intergenic | 45.0% | |
GTGCTTGAAGTTGTCTTTCG+AGG | + | chr4.2:16459431-16459450 | None:intergenic | 45.0% | |
TATGGCTATGGATGATGAGG+AGG | - | chr4.2:16460034-16460053 | MS.gene028214:CDS | 45.0% | |
TGATGAGAAAAAGGGGTGGT+AGG | + | chr4.2:16459222-16459241 | None:intergenic | 45.0% | |
TGTGGAGGAGAATGAAGAAG+AGG | - | chr4.2:16460010-16460029 | MS.gene028214:CDS | 45.0% | |
!! | GAGTGTTGAAGGAAATGTGG+AGG | - | chr4.2:16459995-16460014 | MS.gene028214:CDS | 45.0% |
GCATCTCAACCTCTCAAAGC+TGG | - | chr4.2:16459159-16459178 | MS.gene028214:CDS | 50.0% | |
GTATCACCTTGTGGCGGTAA+AGG | + | chr4.2:16460179-16460198 | None:intergenic | 50.0% | |
GTGGTAGGGTAAAGGAGGAT+TGG | + | chr4.2:16459207-16459226 | None:intergenic | 50.0% | |
TATGGATGATGAGGAGGAGG+AGG | - | chr4.2:16460040-16460059 | MS.gene028214:CDS | 50.0% | |
TTAGCTCCTTTACCGCCACA+AGG | - | chr4.2:16460170-16460189 | MS.gene028214:CDS | 50.0% | |
! | GGAGGATTGGTGAATCTGTG+AGG | + | chr4.2:16459194-16459213 | None:intergenic | 50.0% |
AAGGGGTGGTAGGGTAAAGG+AGG | + | chr4.2:16459212-16459231 | None:intergenic | 55.0% | |
GGCTATGGATGATGAGGAGG+AGG | - | chr4.2:16460037-16460056 | MS.gene028214:CDS | 55.0% | |
AGACCGGCCGCGACATCATA+AGG | + | chr4.2:16459795-16459814 | None:intergenic | 60.0% | |
CCACCTTATGATGTCGCGGC+CGG | - | chr4.2:16459789-16459808 | MS.gene028214:CDS | 60.0% | |
GGATGATGAGGAGGAGGAGG+AGG | - | chr4.2:16460043-16460062 | MS.gene028214:CDS | 60.0% | |
CCGGCCGCGACATCATAAGG+TGG | + | chr4.2:16459792-16459811 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.2 | gene | 16459096 | 16460307 | 16459096 | ID=MS.gene028214 |
chr4.2 | mRNA | 16459096 | 16460307 | 16459096 | ID=MS.gene028214.t1;Parent=MS.gene028214 |
chr4.2 | exon | 16459096 | 16460307 | 16459096 | ID=MS.gene028214.t1.exon1;Parent=MS.gene028214.t1 |
chr4.2 | CDS | 16459096 | 16460307 | 16459096 | ID=cds.MS.gene028214.t1;Parent=MS.gene028214.t1 |
Gene Sequence |
Protein sequence |