AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028371

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028371.t1 MTR_4g094412 95.335 493 15 5 1 491 1 487 0.0 962
MS.gene028371.t1 MTR_4g094412 95.248 484 15 5 10 491 1 478 0.0 943
MS.gene028371.t1 MTR_7g009730 35.984 503 226 21 42 483 21 488 1.84e-54 192
MS.gene028371.t1 MTR_4g107970 39.677 310 166 7 13 306 12 316 1.54e-51 185
MS.gene028371.t1 MTR_2g023930 32.245 490 240 14 28 477 92 529 2.44e-49 177
MS.gene028371.t1 MTR_4g107970 42.231 251 112 6 77 306 1 239 3.13e-49 177
MS.gene028371.t1 MTR_7g110720 40.784 255 102 6 227 480 171 377 5.69e-49 173
MS.gene028371.t1 MTR_7g110720 40.784 255 102 6 227 480 198 404 1.07e-48 173
MS.gene028371.t1 MTR_3g053330 42.400 250 103 8 229 477 235 444 7.91e-48 172
MS.gene028371.t1 MTR_2g088000 33.333 456 226 15 52 477 148 555 1.05e-47 174
MS.gene028371.t1 MTR_4g132430 41.667 240 115 5 229 467 111 326 1.68e-42 155
MS.gene028371.t1 MTR_4g132430 31.354 421 231 11 50 467 95 460 1.32e-41 155
MS.gene028371.t1 MTR_2g045360 51.974 152 62 3 229 377 195 338 9.45e-41 152
MS.gene028371.t1 MTR_4g049760 62.376 101 38 0 230 330 275 375 1.77e-39 150
MS.gene028371.t1 MTR_4g049790 60.396 101 40 0 230 330 297 397 1.65e-37 145
MS.gene028371.t1 MTR_4g047580 30.742 283 177 5 61 330 90 366 7.41e-34 134
MS.gene028371.t1 MTR_4g007060 54.762 84 31 2 228 305 106 188 3.25e-26 108
MS.gene028371.t1 MTR_4g007060 54.762 84 31 2 228 305 140 222 4.64e-26 108
MS.gene028371.t1 MTR_3g106060 45.045 111 51 2 202 302 85 195 3.20e-25 105
MS.gene028371.t1 MTR_5g094430 50.526 95 46 1 227 321 234 327 4.37e-25 107
MS.gene028371.t1 MTR_5g094430 52.459 61 27 2 245 305 88 146 2.02e-12 69.3
MS.gene028371.t1 MTR_5g094430 50.526 95 46 1 227 321 212 305 4.86e-25 107
MS.gene028371.t1 MTR_5g094430 52.459 61 27 2 245 305 66 124 2.47e-12 68.9
MS.gene028371.t1 MTR_1g013760 43.810 105 59 0 225 329 120 224 1.51e-24 103
MS.gene028371.t1 MTR_1g013790 57.576 66 28 0 240 305 96 161 2.35e-24 102
MS.gene028371.t1 MTR_5g094430 50.526 95 46 1 227 321 346 439 2.56e-24 106
MS.gene028371.t1 MTR_5g094430 52.459 61 27 2 245 305 200 258 4.90e-12 68.6
MS.gene028371.t1 MTR_2g105060 53.086 81 33 2 230 305 149 229 2.26e-23 100
MS.gene028371.t1 MTR_2g105060 59.677 62 25 0 244 305 93 154 2.67e-23 99.0
MS.gene028371.t1 MTR_3g031220 53.846 78 35 1 229 306 349 425 3.63e-23 102
MS.gene028371.t1 MTR_3g031220 53.226 62 27 2 245 306 198 257 1.13e-14 76.6
MS.gene028371.t1 MTR_4g013260 51.899 79 37 1 229 307 320 397 4.15e-23 102
MS.gene028371.t1 MTR_4g013260 44.872 78 40 2 228 305 169 243 7.69e-15 77.0
MS.gene028371.t1 MTR_7g011820 44.444 117 58 3 226 336 387 502 6.72e-23 102
MS.gene028371.t1 MTR_7g011820 51.724 58 26 2 245 302 228 283 4.01e-11 65.5
MS.gene028371.t1 MTR_3g009470 43.590 117 58 2 202 318 459 567 7.43e-23 102
MS.gene028371.t1 MTR_3g009470 51.667 60 27 2 246 305 281 338 2.90e-12 69.7
MS.gene028371.t1 MTR_3g056100 55.696 79 34 1 227 305 253 330 7.69e-23 101
MS.gene028371.t1 MTR_3g056100 34.228 149 88 5 245 392 99 238 3.62e-13 71.6
MS.gene028371.t1 MTR_3g056100 55.696 79 34 1 227 305 240 317 8.81e-23 100
MS.gene028371.t1 MTR_3g056100 50.820 61 28 2 245 305 99 157 1.02e-11 67.4
MS.gene028371.t1 MTR_3g056100 55.000 80 35 1 227 306 397 475 9.24e-23 102
MS.gene028371.t1 MTR_3g056100 34.228 149 88 5 245 392 243 382 9.61e-13 70.9
MS.gene028371.t1 MTR_3g056100 55.000 80 35 1 227 306 384 462 1.00e-22 102
MS.gene028371.t1 MTR_3g056100 50.820 61 28 2 245 305 243 301 9.57e-12 67.8
MS.gene028371.t1 MTR_7g071120 53.165 79 36 1 229 307 308 385 1.30e-22 100
MS.gene028371.t1 MTR_7g071120 43.011 93 48 3 213 305 137 224 9.19e-14 73.9
MS.gene028371.t1 MTR_5g074400 53.846 78 35 1 229 306 404 480 1.63e-22 101
MS.gene028371.t1 MTR_5g074400 54.098 61 26 2 245 305 243 301 3.83e-14 75.1
MS.gene028371.t1 MTR_5g044695 82.979 47 8 0 229 275 61 107 2.75e-22 92.0
MS.gene028371.t1 MTR_3g104750 52.000 75 35 1 229 303 88 161 2.86e-22 94.0
MS.gene028371.t1 MTR_5g097490 50.000 86 42 1 230 315 237 321 3.93e-22 98.6
MS.gene028371.t1 MTR_5g042920 45.192 104 52 2 217 320 296 394 6.71e-22 98.2
MS.gene028371.t1 MTR_5g042920 40.659 91 46 3 221 305 121 209 2.58e-13 72.0
MS.gene028371.t1 MTR_6g038890 82.979 47 8 0 229 275 172 218 1.47e-21 93.6
MS.gene028371.t1 MTR_7g109800 44.944 89 48 1 229 317 129 216 1.78e-21 95.1
MS.gene028371.t1 MTR_2g033820 46.237 93 49 1 229 321 187 278 2.02e-21 96.3
MS.gene028371.t1 MTR_4g082580 48.276 87 44 1 230 316 263 348 4.18e-21 95.5
MS.gene028371.t1 MTR_7g080020 50.633 79 38 1 229 307 477 554 5.76e-21 97.1
MS.gene028371.t1 MTR_7g080000 50.633 79 38 1 229 307 416 493 5.82e-21 96.7
MS.gene028371.t1 MTR_1g015140 51.351 74 35 1 230 303 87 159 6.47e-21 90.1
MS.gene028371.t1 MTR_4g130900 51.250 80 38 1 227 306 341 419 9.45e-21 95.5
MS.gene028371.t1 MTR_7g100510 50.649 77 37 1 233 309 349 424 2.64e-20 93.6
MS.gene028371.t1 MTR_7g100510 46.250 80 37 3 246 325 190 263 3.53e-13 71.6
MS.gene028371.t1 MTR_7g109600 54.054 74 31 1 245 318 53 123 3.05e-20 90.9
MS.gene028371.t1 MTR_4g094908 38.095 126 49 2 202 327 242 338 3.55e-20 92.0
MS.gene028371.t1 MTR_4g094588 40.385 104 57 2 232 335 165 263 5.27e-20 91.7
MS.gene028371.t1 MTR_1g086790 50.649 77 37 1 229 305 142 217 1.02e-19 90.5
MS.gene028371.t1 MTR_7g028415 50.704 71 34 1 234 304 82 151 1.21e-19 86.7
MS.gene028371.t1 MTR_7g028710 50.704 71 34 1 234 304 82 151 1.21e-19 86.7
MS.gene028371.t1 MTR_1g077780 38.519 135 73 5 194 321 5 136 1.29e-19 85.9
MS.gene028371.t1 MTR_8g092010 41.237 97 50 2 232 328 95 184 7.35e-19 84.7
MS.gene028371.t1 MTR_5g016610 61.818 55 21 0 250 304 204 258 1.32e-18 86.3
MS.gene028371.t1 MTR_8g087000 56.923 65 28 0 245 309 77 141 1.35e-18 85.5
MS.gene028371.t1 MTR_8g087000 56.923 65 28 0 245 309 76 140 1.37e-18 85.5
MS.gene028371.t1 MTR_4g122530 48.718 78 39 1 229 306 192 268 1.52e-18 88.2
MS.gene028371.t1 MTR_7g079010 52.778 72 33 1 232 303 128 198 2.35e-18 84.3
MS.gene028371.t1 MTR_1g070455 57.895 57 24 0 246 302 294 350 2.93e-18 86.7
MS.gene028371.t1 MTR_5g091390 49.333 75 37 1 232 306 144 217 4.58e-18 85.5
MS.gene028371.t1 MTR_2g083870 49.367 79 40 0 236 314 71 149 4.64e-18 84.3
MS.gene028371.t1 MTR_8g096730 41.463 82 47 1 230 311 55 135 1.02e-17 80.5
MS.gene028371.t1 MTR_1g009613 39.796 98 40 1 205 302 241 319 1.07e-17 84.7
MS.gene028371.t1 MTR_8g028565 40.625 96 54 1 222 314 129 224 1.43e-17 84.3
MS.gene028371.t1 MTR_2g032030 48.000 75 39 0 246 320 268 342 2.22e-17 85.1
MS.gene028371.t1 MTR_2g032030 48.000 75 39 0 246 320 268 342 5.88e-17 83.2
MS.gene028371.t1 MTR_5g043880 44.086 93 50 2 229 320 108 199 6.84e-17 81.3
MS.gene028371.t1 MTR_3g095040 45.455 77 41 1 232 308 105 180 1.79e-16 78.6
MS.gene028371.t1 MTR_8g007270 47.297 74 38 1 229 302 138 210 1.82e-16 79.0
MS.gene028371.t1 MTR_4g127040 46.154 78 33 1 245 322 245 313 4.74e-16 79.3
MS.gene028371.t1 MTR_2g024350 38.000 100 48 2 246 331 9 108 4.89e-16 77.8
MS.gene028371.t1 MTR_2g016770 52.459 61 29 0 245 305 35 95 5.41e-16 77.4
MS.gene028371.t1 MTR_7g079040 50.769 65 32 0 250 314 159 223 6.25e-16 79.3
MS.gene028371.t1 MTR_2g016770 52.459 61 29 0 245 305 27 87 7.92e-16 76.6
MS.gene028371.t1 MTR_8g098945 43.836 73 41 0 242 314 126 198 9.72e-16 77.8
MS.gene028371.t1 MTR_3g095080 44.595 74 40 1 229 302 128 200 1.63e-15 75.9
MS.gene028371.t1 MTR_3g095080 44.595 74 40 1 229 302 152 224 1.79e-15 76.6
MS.gene028371.t1 MTR_3g108960 48.000 75 35 1 232 302 297 371 1.85e-15 78.6
MS.gene028371.t1 MTR_3g031220 53.226 62 27 2 245 306 198 257 4.13e-15 77.4
MS.gene028371.t1 MTR_2g024380 51.667 60 29 0 246 305 252 311 1.02e-14 76.6
MS.gene028371.t1 MTR_0117s0040 42.857 77 38 1 246 322 75 145 1.51e-14 73.9
MS.gene028371.t1 MTR_7g062220 47.222 72 36 2 232 302 110 180 1.64e-14 74.7
MS.gene028371.t1 MTR_1g099600 47.761 67 35 0 246 312 186 252 2.49e-14 74.3
MS.gene028371.t1 MTR_8g092140 51.667 60 28 1 243 302 158 216 2.55e-14 72.8
MS.gene028371.t1 MTR_4g007060 50.820 61 23 2 228 282 140 199 3.21e-14 72.8
MS.gene028371.t1 MTR_5g074200 36.458 96 59 2 245 340 220 313 1.96e-13 71.6
MS.gene028371.t1 MTR_6g086555 46.250 80 41 2 228 306 189 267 3.55e-13 71.6
MS.gene028371.t1 MTR_3g009470 51.667 60 27 2 246 305 281 338 1.53e-12 70.1
MS.gene028371.t1 MTR_7g109600 51.852 54 23 1 265 318 7 57 4.37e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028371.t1 AT1G68150 45.119 379 146 12 10 371 27 360 4.28e-83 262
MS.gene028371.t1 AT5G15130 40.984 305 129 8 41 319 22 301 2.35e-55 194
MS.gene028371.t1 AT5G15130 43.866 269 115 7 77 319 1 259 7.64e-54 189
MS.gene028371.t1 AT4G04450 45.211 261 112 7 222 477 175 409 1.95e-51 181
MS.gene028371.t1 AT4G04450 45.211 261 112 7 222 477 269 503 1.20e-50 181
MS.gene028371.t1 AT1G62300 32.438 521 243 19 13 478 73 539 5.00e-49 177
MS.gene028371.t1 AT1G18860 41.297 293 122 6 229 477 223 509 2.94e-47 171
MS.gene028371.t1 AT4G01720 45.161 248 111 5 227 474 221 443 4.44e-44 162
MS.gene028371.t1 AT4G22070 35.535 318 167 8 18 305 48 357 1.41e-43 162
MS.gene028371.t1 AT4G22070 35.535 318 167 8 18 305 48 357 1.41e-43 162
MS.gene028371.t1 AT4G22070 35.535 318 167 8 18 305 48 357 1.41e-43 162
MS.gene028371.t1 AT4G22070 35.535 318 167 8 18 305 48 357 1.41e-43 162
MS.gene028371.t1 AT1G69810 33.935 277 140 8 66 319 22 278 4.76e-37 140
MS.gene028371.t1 AT1G69810 63.043 92 33 1 229 319 129 220 3.49e-35 134
MS.gene028371.t1 AT4G31800 50.962 104 45 3 230 328 156 258 6.45e-26 108
MS.gene028371.t1 AT4G31800 50.962 104 45 3 230 328 91 193 7.02e-26 106
MS.gene028371.t1 AT1G80840 58.462 65 27 0 241 305 142 206 8.37e-25 104
MS.gene028371.t1 AT2G25000 61.905 63 24 0 243 305 101 163 1.74e-23 99.4
MS.gene028371.t1 AT2G25000 61.905 63 24 0 243 305 101 163 1.74e-23 99.4
MS.gene028371.t1 AT2G25000 61.905 63 24 0 243 305 123 185 3.35e-23 99.0
MS.gene028371.t1 AT2G25000 61.905 63 24 0 243 305 144 206 3.41e-23 99.4
MS.gene028371.t1 AT2G38470 41.463 123 71 1 229 351 346 467 3.47e-23 103
MS.gene028371.t1 AT2G38470 48.101 79 37 4 227 305 168 242 5.20e-14 74.7
MS.gene028371.t1 AT5G56270 55.128 78 34 1 229 306 471 547 5.79e-23 102
MS.gene028371.t1 AT5G56270 48.438 64 31 2 242 305 270 331 3.94e-11 65.9
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 187 265 1.15e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 26 93 1.09e-11 67.0
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 187 265 1.15e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 26 93 1.09e-11 67.0
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 187 265 1.15e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 26 93 1.09e-11 67.0
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 187 265 1.15e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 26 93 1.09e-11 67.0
MS.gene028371.t1 AT5G49520 34.884 172 73 5 229 377 205 360 1.21e-22 100
MS.gene028371.t1 AT5G26170 54.167 72 32 1 231 302 99 169 1.32e-22 95.1
MS.gene028371.t1 AT3G01080 46.875 96 46 2 210 305 275 365 2.07e-22 99.8
MS.gene028371.t1 AT1G29860 53.247 77 35 1 229 305 120 195 2.86e-22 97.1
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 291 369 3.02e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 130 197 1.70e-11 66.6
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 323 401 3.03e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 162 229 1.66e-11 67.0
MS.gene028371.t1 AT1G13960 55.405 74 32 1 232 305 243 315 3.17e-22 98.6
MS.gene028371.t1 AT1G13960 54.098 61 26 2 245 305 76 134 7.67e-14 73.2
MS.gene028371.t1 AT2G04880 53.247 77 35 1 231 307 269 344 3.24e-22 99.8
MS.gene028371.t1 AT2G04880 36.000 100 49 3 243 329 109 206 5.28e-13 71.2
MS.gene028371.t1 AT3G01080 46.875 96 46 2 210 305 313 403 3.57e-22 99.4
MS.gene028371.t1 AT4G26640 53.750 80 36 1 227 306 363 441 4.28e-22 100
MS.gene028371.t1 AT4G26640 45.714 70 36 2 236 305 202 269 2.00e-11 66.6
MS.gene028371.t1 AT1G13960 55.405 74 32 1 232 305 396 468 4.94e-22 99.4
MS.gene028371.t1 AT1G13960 54.098 61 26 2 245 305 229 287 8.98e-14 73.9
MS.gene028371.t1 AT2G04880 53.247 77 35 1 231 307 293 368 5.20e-22 99.4
MS.gene028371.t1 AT2G04880 45.588 68 35 2 243 310 109 174 7.97e-13 70.9
MS.gene028371.t1 AT5G46350 45.536 112 56 3 232 342 170 277 5.86e-22 97.1
MS.gene028371.t1 AT4G30935 43.810 105 53 2 223 322 309 412 2.30e-21 97.1
MS.gene028371.t1 AT4G18170 51.282 78 37 1 229 306 156 232 3.03e-21 94.7
MS.gene028371.t1 AT2G03340 45.745 94 46 2 217 310 391 479 3.81e-21 96.7
MS.gene028371.t1 AT2G03340 54.098 61 26 2 245 305 250 308 4.22e-14 75.1
MS.gene028371.t1 AT5G13080 50.685 73 35 1 232 304 54 125 4.96e-21 89.7
MS.gene028371.t1 AT5G07100 50.649 77 37 1 229 305 125 200 1.54e-20 90.5
MS.gene028371.t1 AT5G07100 40.860 93 50 2 243 335 22 109 1.51e-13 70.1
MS.gene028371.t1 AT5G07100 50.649 77 37 1 229 305 125 200 1.54e-20 90.5
MS.gene028371.t1 AT5G07100 40.860 93 50 2 243 335 22 109 1.51e-13 70.1
MS.gene028371.t1 AT5G07100 50.649 77 37 1 229 305 125 200 1.54e-20 90.5
MS.gene028371.t1 AT5G07100 40.860 93 50 2 243 335 22 109 1.51e-13 70.1
MS.gene028371.t1 AT5G07100 50.649 77 37 1 229 305 125 200 1.54e-20 90.5
MS.gene028371.t1 AT5G07100 40.860 93 50 2 243 335 22 109 1.51e-13 70.1
MS.gene028371.t1 AT5G07100 50.649 77 37 1 229 305 218 293 2.77e-20 92.0
MS.gene028371.t1 AT5G07100 43.421 76 42 1 243 318 115 189 7.56e-13 69.7
MS.gene028371.t1 AT3G62340 42.105 114 61 2 232 341 105 217 3.34e-20 90.9
MS.gene028371.t1 AT2G47260 44.898 98 48 3 229 321 158 254 5.82e-20 91.3
MS.gene028371.t1 AT1G29280 50.704 71 35 0 236 306 65 135 7.05e-20 89.7
MS.gene028371.t1 AT3G04670 66.038 53 18 0 250 302 267 319 2.06e-19 89.7
MS.gene028371.t1 AT5G41570 51.389 72 34 1 232 303 85 155 2.27e-19 86.3
MS.gene028371.t1 AT4G24240 48.315 89 40 2 229 311 259 347 3.30e-19 89.4
MS.gene028371.t1 AT2G23320 51.899 79 34 1 230 304 221 299 3.39e-19 89.0
MS.gene028371.t1 AT4G26440 49.367 79 39 1 228 306 355 432 4.69e-19 90.5
MS.gene028371.t1 AT5G64810 50.704 71 34 1 232 302 97 166 7.30e-19 85.1
MS.gene028371.t1 AT1G64000 51.389 72 34 1 232 303 101 171 1.07e-18 84.7
MS.gene028371.t1 AT2G30590 61.404 57 21 1 250 305 318 374 1.13e-18 88.2
MS.gene028371.t1 AT4G31550 40.594 101 41 1 202 302 222 303 1.43e-18 87.0
MS.gene028371.t1 AT5G28650 62.264 53 20 0 250 302 267 319 1.53e-18 87.0
MS.gene028371.t1 AT2G30250 48.718 78 39 1 229 306 312 388 1.80e-18 87.8
MS.gene028371.t1 AT4G31550 40.816 98 39 1 205 302 224 302 2.09e-18 86.7
MS.gene028371.t1 AT1G55600 45.455 77 41 1 229 305 291 366 2.30e-18 88.2
MS.gene028371.t1 AT2G24570 41.584 101 40 1 202 302 219 300 2.31e-18 86.3
MS.gene028371.t1 AT2G46130 52.778 72 33 1 232 303 17 87 2.57e-18 80.9
MS.gene028371.t1 AT1G69310 50.000 74 36 1 229 302 131 203 3.89e-18 85.1
MS.gene028371.t1 AT1G69310 50.000 74 36 1 229 302 131 203 3.89e-18 85.1
MS.gene028371.t1 AT1G69310 50.000 74 36 1 229 302 131 203 3.89e-18 85.1
MS.gene028371.t1 AT3G58710 45.161 93 48 1 236 328 62 151 6.52e-18 84.3
MS.gene028371.t1 AT3G58710 45.161 93 48 1 236 328 61 150 7.13e-18 84.0
MS.gene028371.t1 AT3G01970 50.000 72 35 1 231 302 51 121 7.84e-18 80.9
MS.gene028371.t1 AT2G37260 56.923 65 27 1 240 304 264 327 5.11e-17 82.8
MS.gene028371.t1 AT2G37260 40.404 99 53 3 227 321 63 159 2.01e-14 75.1
MS.gene028371.t1 AT2G37260 56.923 65 27 1 240 304 262 325 5.25e-17 82.8
MS.gene028371.t1 AT2G37260 40.404 99 53 3 227 321 61 157 2.09e-14 75.1
MS.gene028371.t1 AT1G30650 53.968 63 29 0 250 312 222 284 7.68e-17 83.2
MS.gene028371.t1 AT2G34830 52.239 67 32 0 246 312 216 282 1.00e-16 82.8
MS.gene028371.t1 AT2G37260 56.923 65 27 1 240 304 344 407 1.06e-16 82.8
MS.gene028371.t1 AT2G37260 42.857 98 45 4 227 315 143 238 4.45e-14 74.7
MS.gene028371.t1 AT2G34830 52.239 67 32 0 246 312 225 291 1.18e-16 82.4
MS.gene028371.t1 AT4G01250 48.571 70 36 0 245 314 128 197 1.55e-16 80.5
MS.gene028371.t1 AT2G44745 45.946 74 39 1 229 302 129 201 1.91e-16 79.0
MS.gene028371.t1 AT4G39410 47.297 74 38 1 229 302 207 279 2.06e-16 80.5
MS.gene028371.t1 AT5G52830 46.341 82 41 1 236 314 153 234 8.25e-16 79.3
MS.gene028371.t1 AT2G21900 45.455 66 35 1 240 305 104 168 1.39e-15 75.9
MS.gene028371.t1 AT4G23550 40.860 93 54 1 228 320 124 215 2.24e-15 77.4
MS.gene028371.t1 AT4G31800 56.897 58 20 2 230 282 156 213 2.03e-14 73.2
MS.gene028371.t1 AT5G43290 55.172 58 25 1 245 302 114 170 1.00e-13 72.0
MS.gene028371.t1 AT5G45050 47.059 68 36 0 245 312 1152 1219 1.53e-13 73.9
MS.gene028371.t1 AT5G45050 47.059 68 36 0 245 312 1180 1247 1.61e-13 73.9
MS.gene028371.t1 AT5G45050 46.377 69 37 0 245 313 1041 1109 2.01e-13 73.6
MS.gene028371.t1 AT2G46130 48.611 72 32 2 232 303 17 83 2.03e-13 67.0
MS.gene028371.t1 AT1G69310 45.946 74 35 2 229 302 131 199 3.07e-13 70.5
MS.gene028371.t1 AT5G24110 43.836 73 38 2 230 300 99 170 1.35e-11 65.9
MS.gene028371.t1 AT5G45260 43.590 78 42 1 245 320 1208 1285 3.71e-11 66.2
MS.gene028371.t1 AT2G40740 46.667 75 35 2 245 314 173 247 7.15e-11 63.5

Find 80 sgRNAs with CRISPR-Local

Find 127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCATCATTATTATTATTAT+TGG 0.116107 4.2:+18196492 None:intergenic
AATCCTAATATTTCAGATTA+TGG 0.198452 4.2:-18196640 MS.gene028371:CDS
ATTATTAGTGTAAGGATTAA+AGG 0.199622 4.2:+18196600 None:intergenic
ATATTTGAAGATTGGTTTAA+TGG 0.231617 4.2:+18196565 None:intergenic
GAAACCCTAGCCTTTCTATT+AGG 0.250513 4.2:+18197259 None:intergenic
AAACCATAATCTGAAATATT+AGG 0.280244 4.2:+18196637 None:intergenic
ACTTTCCATCTCCATTTCTA+AGG 0.281935 4.2:+18197968 None:intergenic
ATACATACTTGTTTCCTAAC+TGG 0.295148 4.2:+18197010 None:intergenic
AGTATAAGTGAGAGTGATTT+GGG 0.310766 4.2:-18197445 MS.gene028371:CDS
GGATGCCAATGGAGAAAATA+TGG 0.334675 4.2:-18197100 MS.gene028371:CDS
TATTTGAAGATTGGTTTAAT+GGG 0.337890 4.2:+18196566 None:intergenic
TGCTTCTAATATTTGAAGAT+TGG 0.351720 4.2:+18196557 None:intergenic
GTAATATTGTTTGGTGGTAA+TGG 0.353117 4.2:+18197478 None:intergenic
AATTCCTTGGGATGGATCAT+TGG 0.353833 4.2:+18196528 None:intergenic
TGGATATTCATGATAGGGTT+TGG 0.367522 4.2:-18196309 MS.gene028371:CDS
ATTCCTTGGGATGGATCATT+GGG 0.374431 4.2:+18196529 None:intergenic
ATCTCATGAAATGATCTTGA+TGG 0.384052 4.2:+18197532 None:intergenic
TAGTATAAGTGAGAGTGATT+TGG 0.391243 4.2:-18197446 MS.gene028371:CDS
TTGCATCAGATCCTAAGTTT+AGG 0.396218 4.2:-18196246 MS.gene028371:CDS
TGTAAGGATTAAAGGATTGT+TGG 0.404802 4.2:+18196608 None:intergenic
AGGTTGATCAGTTGAAATAT+TGG 0.411066 4.2:+18196426 None:intergenic
TCATCATCAGTAATATTGTT+TGG 0.412086 4.2:+18197469 None:intergenic
GCCATTGCAGTTGCACCAAC+AGG 0.427583 4.2:+18196709 None:intergenic
ACAGTTAAGTGCCTTAGAAA+TGG 0.429802 4.2:-18197979 MS.gene028371:intron
GTAAGGATTAAAGGATTGTT+GGG 0.431662 4.2:+18196609 None:intergenic
TTGCTCCAGGCTGTCCAGTT+AGG 0.435647 4.2:-18197024 MS.gene028371:CDS
GTGATTTGGGTTTGTCATTG+AGG 0.445503 4.2:-18197432 MS.gene028371:CDS
TGAAAGCTATTATTAGTGTA+AGG 0.448252 4.2:+18196592 None:intergenic
TACCACTGGATATTCATGAT+AGG 0.448415 4.2:-18196315 MS.gene028371:CDS
ATCAGTTGAAATATTGGAGC+TGG 0.454963 4.2:+18196432 None:intergenic
TGAATATCCAGTGGTACTCT+AGG 0.457880 4.2:+18196322 None:intergenic
CGATAGTAGGCACGTGGACA+TGG 0.470350 4.2:+18197055 None:intergenic
AGATGACACGAAAATGAAAC+AGG 0.474032 4.2:-18198384 MS.gene028371:intron
AGATCATGAGCTTGTTAAAG+AGG 0.485260 4.2:-18198486 MS.gene028371:CDS
TGATGGTCCTTCACCACTTG+TGG 0.487925 4.2:+18197549 None:intergenic
ACCCTAGCCTTTCTATTAGG+AGG 0.495222 4.2:+18197262 None:intergenic
TGTTAAAGAGGATGATGAGA+AGG 0.495792 4.2:-18198474 MS.gene028371:CDS
CCCTCCTAATAGAAAGGCTA+GGG 0.503705 4.2:-18197263 MS.gene028371:CDS
AGAAAATAATAATAAAAGAA+AGG 0.505035 4.2:-18197856 MS.gene028371:intron
TGTTTCCTAACTGGACAGCC+TGG 0.509897 4.2:+18197019 None:intergenic
ATACTAATTACAACATATGA+AGG 0.514191 4.2:-18196751 MS.gene028371:CDS
TGCTAGTACTACTCTGCTGT+TGG 0.516325 4.2:+18196377 None:intergenic
ACCACTGGATATTCATGATA+GGG 0.516884 4.2:-18196314 MS.gene028371:CDS
TATGGACAGAAAATAGCAAA+AGG 0.518587 4.2:-18197082 MS.gene028371:CDS
CCCTAGCCTTTCTATTAGGA+GGG 0.524327 4.2:+18197263 None:intergenic
GCAGTTGCACCAACAGGTAG+TGG 0.543336 4.2:+18196715 None:intergenic
AATACTGAGGGAAATAAAGA+AGG 0.543880 4.2:-18197382 MS.gene028371:CDS
TTATTCCCCTCCTAATAGAA+AGG 0.546213 4.2:-18197269 MS.gene028371:CDS
GCAACAGCAAGCCTAAACTT+AGG 0.549893 4.2:+18196235 None:intergenic
TCATAACCCTAGAGTACCAC+TGG 0.551641 4.2:-18196329 MS.gene028371:CDS
GACAATAATGCAGCCACAAG+TGG 0.553171 4.2:-18197562 MS.gene028371:CDS
AGCAACAGTACAACGATAGT+AGG 0.557840 4.2:+18197042 None:intergenic
AGTGCAGAATAAAATGCAAA+GGG 0.560508 4.2:-18197329 MS.gene028371:CDS
CCCCTCCTAATAGAAAGGCT+AGG 0.560534 4.2:-18197264 MS.gene028371:CDS
TATCGTTGTACTGTTGCTCC+AGG 0.560802 4.2:-18197037 MS.gene028371:CDS
ACCTGTTGGTGCAACTGCAA+TGG 0.566391 4.2:-18196710 MS.gene028371:CDS
AATGCAGCCACAAGTGGTGA+AGG 0.567792 4.2:-18197556 MS.gene028371:CDS
TCATCAGTAATATTGTTTGG+TGG 0.568590 4.2:+18197472 None:intergenic
CCTAGCCTTTCTATTAGGAG+GGG 0.569534 4.2:+18197264 None:intergenic
AAACAAAGCATTGAGGAAAG+TGG 0.571381 4.2:-18197934 MS.gene028371:CDS
GAATATCCAGTGGTACTCTA+GGG 0.576532 4.2:+18196323 None:intergenic
CAGTGCAGAATAAAATGCAA+AGG 0.585438 4.2:-18197330 MS.gene028371:CDS
TAAAATGCAAAGGGTACATG+AGG 0.591092 4.2:-18197320 MS.gene028371:CDS
GAAGTACATGAAGCTACAGC+TGG 0.596404 4.2:-18198449 MS.gene028371:CDS
CATAACCATCCACTACCTGT+TGG 0.598750 4.2:-18196724 MS.gene028371:CDS
AAGTGCCTTAGAAATGGAGA+TGG 0.601274 4.2:-18197973 MS.gene028371:CDS
ATTCATGATAGGGTTTGGAA+AGG 0.609091 4.2:-18196304 MS.gene028371:CDS
AAGAAGAAAACAAAGCATTG+AGG 0.626884 4.2:-18197941 MS.gene028371:CDS
CAAAGGGTACATGAGGTGCC+TGG 0.627520 4.2:-18197313 MS.gene028371:CDS
AGCAACAACACTACTACACA+TGG 0.627625 4.2:-18196181 MS.gene028371:CDS
TTGCACCAACAGGTAGTGGA+TGG 0.629935 4.2:+18196719 None:intergenic
TTGAAGATTGGTTTAATGGG+TGG 0.629949 4.2:+18196569 None:intergenic
AGATGAATGATGGATGCCAA+TGG 0.630242 4.2:-18197111 MS.gene028371:CDS
AACCCCAATGATCCATCCCA+AGG 0.635443 4.2:-18196532 MS.gene028371:CDS
CACGTGTCAGAGAAATACTG+AGG 0.666480 4.2:-18197395 MS.gene028371:CDS
GCATGAGTAGTAGTAACACC+AGG 0.673761 4.2:+18197295 None:intergenic
TTCCTTGGGATGGATCATTG+GGG 0.675100 4.2:+18196530 None:intergenic
ACGTGTCAGAGAAATACTGA+GGG 0.676875 4.2:-18197394 MS.gene028371:CDS
ACCCTATCATGAATATCCAG+TGG 0.685743 4.2:+18196313 None:intergenic
GTACAACGATAGTAGGCACG+TGG 0.706885 4.2:+18197049 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATAATAATAAAAGAA+AGG - chr4.2:18196881-18196900 MS.gene028371:intron 10.0%
!! ATTATTATATTAAACACAAT+AGG + chr4.2:18197103-18197122 None:intergenic 10.0%
!! TTATTATATTAAACACAATA+GGG + chr4.2:18197102-18197121 None:intergenic 10.0%
!!! TTCTTTTATTATTATTTTCT+TGG + chr4.2:18196881-18196900 None:intergenic 10.0%
!! AAGAAAAAAGAAATCAATAT+TGG + chr4.2:18196428-18196447 None:intergenic 15.0%
!! AATTATAACTGAAGAATATA+AGG + chr4.2:18196552-18196571 None:intergenic 15.0%
!! ATAAGCAATAATATCAATAT+TGG + chr4.2:18196458-18196477 None:intergenic 15.0%
!! ATATATTAATTCTTAAGATC+CGG + chr4.2:18197915-18197934 None:intergenic 15.0%
!! ATTATAACTGAAGAATATAA+GGG + chr4.2:18196551-18196570 None:intergenic 15.0%
!! CTCATCATTATTATTATTAT+TGG + chr4.2:18198248-18198267 None:intergenic 15.0%
!!! ATTCATTTTTGCTTATATTT+TGG - chr4.2:18197033-18197052 MS.gene028371:CDS 15.0%
!!! TTCATTTTTGCTTATATTTT+GGG - chr4.2:18197034-18197053 MS.gene028371:CDS 15.0%
!! AATCCTAATATTTCAGATTA+TGG - chr4.2:18198097-18198116 MS.gene028371:intron 20.0%
!! ATACTAATTACAACATATGA+AGG - chr4.2:18197986-18198005 MS.gene028371:intron 20.0%
!! ATGTATAACTCTTGAAAAAT+AGG - chr4.2:18196683-18196702 MS.gene028371:CDS 20.0%
!! ATTATTAGTGTAAGGATTAA+AGG + chr4.2:18198140-18198159 None:intergenic 20.0%
!! CATTATTATTATTATTGGTG+AGG + chr4.2:18198243-18198262 None:intergenic 20.0%
!! CTCAAAATATAAGCAAAAAT+TGG - chr4.2:18196952-18196971 MS.gene028371:intron 20.0%
!! TCAACAAAAGTTAATGTATT+TGG - chr4.2:18196975-18196994 MS.gene028371:intron 20.0%
!! TCAATATAAGTTAATGTATC+TGG + chr4.2:18197014-18197033 None:intergenic 20.0%
!! TGATTTCTTTATCAATTAAC+CGG - chr4.2:18197893-18197912 MS.gene028371:CDS 20.0%
!! TTATAACTGAAGAATATAAG+GGG + chr4.2:18196550-18196569 None:intergenic 20.0%
!!! AAACCATAATCTGAAATATT+AGG + chr4.2:18198103-18198122 None:intergenic 20.0%
!!! AATATTGGTAATTATGCTTT+TGG + chr4.2:18196413-18196432 None:intergenic 20.0%
!!! ATATTTGAAGATTGGTTTAA+TGG + chr4.2:18198175-18198194 None:intergenic 20.0%
!!! TATTTGAAGATTGGTTTAAT+GGG + chr4.2:18198174-18198193 None:intergenic 20.0%
!!! TTTTTGCTTATATTTTGAGA+CGG + chr4.2:18196951-18196970 None:intergenic 20.0%
! GATGAAACTAATTATTCTCA+TGG - chr4.2:18197594-18197613 MS.gene028371:intron 25.0%
! TCATCATCAGTAATATTGTT+TGG + chr4.2:18197271-18197290 None:intergenic 25.0%
! TGAAAGCTATTATTAGTGTA+AGG + chr4.2:18198148-18198167 None:intergenic 25.0%
! TGCTTCTAATATTTGAAGAT+TGG + chr4.2:18198183-18198202 None:intergenic 25.0%
!!! AATTTTATTTCGATCTTCTG+CGG - chr4.2:18197772-18197791 MS.gene028371:intron 25.0%
!!! GTTTTTTGAAAGATGAATGA+TGG - chr4.2:18197616-18197635 MS.gene028371:intron 25.0%
AATACTGAGGGAAATAAAGA+AGG - chr4.2:18197355-18197374 MS.gene028371:CDS 30.0%
AGAAGAAGAATCCAAAAAGA+TGG - chr4.2:18196176-18196195 MS.gene028371:CDS 30.0%
AGAAGGCAAAAAAGAACAAT+TGG - chr4.2:18197372-18197391 MS.gene028371:CDS 30.0%
AGTATAAGTGAGAGTGATTT+GGG - chr4.2:18197292-18197311 MS.gene028371:CDS 30.0%
AGTGCAGAATAAAATGCAAA+GGG - chr4.2:18197408-18197427 MS.gene028371:CDS 30.0%
ATACATACTTGTTTCCTAAC+TGG + chr4.2:18197730-18197749 None:intergenic 30.0%
ATCTCATGAAATGATCTTGA+TGG + chr4.2:18197208-18197227 None:intergenic 30.0%
CTCTTGAAAAATAGGTATCT+AGG - chr4.2:18196691-18196710 MS.gene028371:CDS 30.0%
GAAGGCAAAAAAGAACAATT+GGG - chr4.2:18197373-18197392 MS.gene028371:CDS 30.0%
GTAAGGATTAAAGGATTGTT+GGG + chr4.2:18198131-18198150 None:intergenic 30.0%
TAGTATAAGTGAGAGTGATT+TGG - chr4.2:18197291-18197310 MS.gene028371:CDS 30.0%
TATGGACAGAAAATAGCAAA+AGG - chr4.2:18197655-18197674 MS.gene028371:intron 30.0%
TCATCAGTAATATTGTTTGG+TGG + chr4.2:18197268-18197287 None:intergenic 30.0%
TGTAAGGATTAAAGGATTGT+TGG + chr4.2:18198132-18198151 None:intergenic 30.0%
! AGGTTGATCAGTTGAAATAT+TGG + chr4.2:18198314-18198333 None:intergenic 30.0%
! GAGATCAATTTCCATCTTTT+TGG + chr4.2:18196190-18196209 None:intergenic 30.0%
! GTAATATTGTTTGGTGGTAA+TGG + chr4.2:18197262-18197281 None:intergenic 30.0%
!! AAGAAGAAAACAAAGCATTG+AGG - chr4.2:18196796-18196815 MS.gene028371:intron 30.0%
AAAGAACTTTGAACTCACTG+TGG + chr4.2:18197527-18197546 None:intergenic 35.0%
ACAGTTAAGTGCCTTAGAAA+TGG - chr4.2:18196758-18196777 MS.gene028371:CDS 35.0%
ACCACTGGATATTCATGATA+GGG - chr4.2:18198423-18198442 MS.gene028371:CDS 35.0%
ACTTTCCATCTCCATTTCTA+AGG + chr4.2:18196772-18196791 None:intergenic 35.0%
AGATGACACGAAAATGAAAC+AGG - chr4.2:18196353-18196372 MS.gene028371:CDS 35.0%
ATCAGTTGAAATATTGGAGC+TGG + chr4.2:18198308-18198327 None:intergenic 35.0%
ATCCTAACCTAACAACTATG+CGG - chr4.2:18197853-18197872 MS.gene028371:intron 35.0%
ATTCATGATAGGGTTTGGAA+AGG - chr4.2:18198433-18198452 MS.gene028371:CDS 35.0%
CAGTGCAGAATAAAATGCAA+AGG - chr4.2:18197407-18197426 MS.gene028371:CDS 35.0%
GAGGTCAAAAACAATTCCTT+GGG + chr4.2:18198224-18198243 None:intergenic 35.0%
TACCACTGGATATTCATGAT+AGG - chr4.2:18198422-18198441 MS.gene028371:CDS 35.0%
TCAAAAACAATTCCTTGGGA+TGG + chr4.2:18198220-18198239 None:intergenic 35.0%
TGAGGTCAAAAACAATTCCT+TGG + chr4.2:18198225-18198244 None:intergenic 35.0%
TGGATATTCATGATAGGGTT+TGG - chr4.2:18198428-18198447 MS.gene028371:CDS 35.0%
TGTTAAAGAGGATGATGAGA+AGG - chr4.2:18196263-18196282 MS.gene028371:CDS 35.0%
TTATTCCCCTCCTAATAGAA+AGG - chr4.2:18197468-18197487 MS.gene028371:CDS 35.0%
TTGCATCAGATCCTAAGTTT+AGG - chr4.2:18198491-18198510 MS.gene028371:CDS 35.0%
! TAAAATGCAAAGGGTACATG+AGG - chr4.2:18197417-18197436 MS.gene028371:CDS 35.0%
! TCTGTCCATATTTTCTCCAT+TGG + chr4.2:18197645-18197664 None:intergenic 35.0%
! TTTTGCATCCAAGAAAAACG+AGG + chr4.2:18198334-18198353 None:intergenic 35.0%
!! AAACAAAGCATTGAGGAAAG+TGG - chr4.2:18196803-18196822 MS.gene028371:intron 35.0%
!! AGATCATGAGCTTGTTAAAG+AGG - chr4.2:18196251-18196270 MS.gene028371:CDS 35.0%
!! TTGAAGATTGGTTTAATGGG+TGG + chr4.2:18198171-18198190 None:intergenic 35.0%
!!! TGCTTATATTTTGGGACAGA+GGG - chr4.2:18197042-18197061 MS.gene028371:CDS 35.0%
!!! TTGCTTATATTTTGGGACAG+AGG - chr4.2:18197041-18197060 MS.gene028371:CDS 35.0%
AAGTGCCTTAGAAATGGAGA+TGG - chr4.2:18196764-18196783 MS.gene028371:CDS 40.0%
AATTCCTTGGGATGGATCAT+TGG + chr4.2:18198212-18198231 None:intergenic 40.0%
ACCCTATCATGAATATCCAG+TGG + chr4.2:18198427-18198446 None:intergenic 40.0%
ACGACTTTGCAACCAATACA+CGG + chr4.2:18197811-18197830 None:intergenic 40.0%
ACGTGTCAGAGAAATACTGA+GGG - chr4.2:18197343-18197362 MS.gene028371:CDS 40.0%
AGCAACAACACTACTACACA+TGG - chr4.2:18198556-18198575 MS.gene028371:CDS 40.0%
AGCAACAGTACAACGATAGT+AGG + chr4.2:18197698-18197717 None:intergenic 40.0%
ATTCCTTGGGATGGATCATT+GGG + chr4.2:18198211-18198230 None:intergenic 40.0%
GAATATCCAGTGGTACTCTA+GGG + chr4.2:18198417-18198436 None:intergenic 40.0%
GGATGCCAATGGAGAAAATA+TGG - chr4.2:18197637-18197656 MS.gene028371:intron 40.0%
TGAATATCCAGTGGTACTCT+AGG + chr4.2:18198418-18198437 None:intergenic 40.0%
! GAAACCCTAGCCTTTCTATT+AGG + chr4.2:18197481-18197500 None:intergenic 40.0%
! GTGATTTGGGTTTGTCATTG+AGG - chr4.2:18197305-18197324 MS.gene028371:CDS 40.0%
!! AGATGAATGATGGATGCCAA+TGG - chr4.2:18197626-18197645 MS.gene028371:intron 40.0%
!! CTGATCAACCTCGTTTTTCT+TGG - chr4.2:18198323-18198342 MS.gene028371:intron 40.0%
!! TGTATTGGTTGCAAAGTCGT+TGG - chr4.2:18197811-18197830 MS.gene028371:intron 40.0%
CACGTGTCAGAGAAATACTG+AGG - chr4.2:18197342-18197361 MS.gene028371:CDS 45.0%
CATAACCATCCACTACCTGT+TGG - chr4.2:18198013-18198032 MS.gene028371:intron 45.0%
CCCTCCTAATAGAAAGGCTA+GGG - chr4.2:18197474-18197493 MS.gene028371:CDS 45.0%
GAAGTACATGAAGCTACAGC+TGG - chr4.2:18196288-18196307 MS.gene028371:CDS 45.0%
GACAATAATGCAGCCACAAG+TGG - chr4.2:18197175-18197194 MS.gene028371:intron 45.0%
GACCGCATAGTTGTTAGGTT+AGG + chr4.2:18197858-18197877 None:intergenic 45.0%
GCAACAGCAAGCCTAAACTT+AGG + chr4.2:18198505-18198524 None:intergenic 45.0%
GCATGAGTAGTAGTAACACC+AGG + chr4.2:18197445-18197464 None:intergenic 45.0%
TATCGTTGTACTGTTGCTCC+AGG - chr4.2:18197700-18197719 MS.gene028371:intron 45.0%
TGAGTGACCGCATAGTTGTT+AGG + chr4.2:18197863-18197882 None:intergenic 45.0%
TGATAGAGATCTCACTCAGC+AGG - chr4.2:18197126-18197145 MS.gene028371:intron 45.0%
TGCTAGTACTACTCTGCTGT+TGG + chr4.2:18198363-18198382 None:intergenic 45.0%
TTCCTTGGGATGGATCATTG+GGG + chr4.2:18198210-18198229 None:intergenic 45.0%
! ACCCTAGCCTTTCTATTAGG+AGG + chr4.2:18197478-18197497 None:intergenic 45.0%
! CCCTAGCCTTTCTATTAGGA+GGG + chr4.2:18197477-18197496 None:intergenic 45.0%
! CCTAGCCTTTCTATTAGGAG+GGG + chr4.2:18197476-18197495 None:intergenic 45.0%
! TCATAACCCTAGAGTACCAC+TGG - chr4.2:18198408-18198427 MS.gene028371:CDS 45.0%
!!! TTTAATTTTTGTTTATATAT+AGG - chr4.2:18197937-18197956 MS.gene028371:CDS 5.0%
AACCCCAATGATCCATCCCA+AGG - chr4.2:18198205-18198224 MS.gene028371:intron 50.0%
AATGCAGCCACAAGTGGTGA+AGG - chr4.2:18197181-18197200 MS.gene028371:intron 50.0%
ACCTGTTGGTGCAACTGCAA+TGG - chr4.2:18198027-18198046 MS.gene028371:intron 50.0%
CCCCTCCTAATAGAAAGGCT+AGG - chr4.2:18197473-18197492 MS.gene028371:CDS 50.0%
GGTTGCAAAGTCGTTGGATC+AGG - chr4.2:18197817-18197836 MS.gene028371:intron 50.0%
GTACAACGATAGTAGGCACG+TGG + chr4.2:18197691-18197710 None:intergenic 50.0%
TGATGGTCCTTCACCACTTG+TGG + chr4.2:18197191-18197210 None:intergenic 50.0%
TGTTTCCTAACTGGACAGCC+TGG + chr4.2:18197721-18197740 None:intergenic 50.0%
! CAGCGACGATTTTCTACTGC+AGG - chr4.2:18198277-18198296 MS.gene028371:intron 50.0%
!! TTGCACCAACAGGTAGTGGA+TGG + chr4.2:18198021-18198040 None:intergenic 50.0%
CGATAGTAGGCACGTGGACA+TGG + chr4.2:18197685-18197704 None:intergenic 55.0%
GCAGTTGCACCAACAGGTAG+TGG + chr4.2:18198025-18198044 None:intergenic 55.0%
GCCATTGCAGTTGCACCAAC+AGG + chr4.2:18198031-18198050 None:intergenic 55.0%
TTGCTCCAGGCTGTCCAGTT+AGG - chr4.2:18197713-18197732 MS.gene028371:intron 55.0%
! CAAAGGGTACATGAGGTGCC+TGG - chr4.2:18197424-18197443 MS.gene028371:CDS 55.0%
TTCGATCTTCTGCGGCAGCG+CGG - chr4.2:18197780-18197799 MS.gene028371:intron 60.0%
AGCGCGGCTGCACCGTGTAT+TGG - chr4.2:18197796-18197815 MS.gene028371:intron 65.0%


Chromosome Type Strat End Strand Name
chr4.2 gene 18196168 18198591 18196168 ID=MS.gene028371
chr4.2 mRNA 18196168 18198591 18196168 ID=MS.gene028371.t1;Parent=MS.gene028371
chr4.2 exon 18198385 18198591 18198385 ID=MS.gene028371.t1.exon1;Parent=MS.gene028371.t1
chr4.2 CDS 18198385 18198591 18198385 ID=cds.MS.gene028371.t1;Parent=MS.gene028371.t1
chr4.2 exon 18197857 18197997 18197857 ID=MS.gene028371.t1.exon2;Parent=MS.gene028371.t1
chr4.2 CDS 18197857 18197997 18197857 ID=cds.MS.gene028371.t1;Parent=MS.gene028371.t1
chr4.2 exon 18197231 18197611 18197231 ID=MS.gene028371.t1.exon3;Parent=MS.gene028371.t1
chr4.2 CDS 18197231 18197611 18197231 ID=cds.MS.gene028371.t1;Parent=MS.gene028371.t1
chr4.2 exon 18197018 18197131 18197018 ID=MS.gene028371.t1.exon4;Parent=MS.gene028371.t1
chr4.2 CDS 18197018 18197131 18197018 ID=cds.MS.gene028371.t1;Parent=MS.gene028371.t1
chr4.2 exon 18196168 18196800 18196168 ID=MS.gene028371.t1.exon5;Parent=MS.gene028371.t1
chr4.2 CDS 18196168 18196800 18196168 ID=cds.MS.gene028371.t1;Parent=MS.gene028371.t1
Gene Sequence

>MS.gene028371

ATGGGTAGAGAAGAAGAATCCAAAAAGATGGAAATTGATCTCTCTTTGAAGATAGATAGTGATGATGATCGAGAAGAAGAAGTAGATCATGAGCTTGTTAAAGAGGATGATGAGAAGGAAGAAGTACATGAAGCTACAGCTGGTGAAATAGAAGACGATGCTTCAGTTATACAACTATCTTTGCAAGATGACACGAAAATGAAACAGGTATATATATAATTTTTCATTGAAGACAAGTAGATCCAAAAGCATAATTACCAATATTGATTTCTTTTTTCTTTGAGAGACCAATATTGATATTATTGCTTATATATTCTAAAAAATTGAGTATTCTTTTAATGAGACAAATTTTCACTAATTATTTGTAACTTTTCTAGTACCCCTTATATTCTTCAGTTATAATTAATATTTTTTTCTTTGTTTGTTCAAAGAAAACATTATTTGTATTATTTTCTTGAACAATTGATCATATTTTCTATAGTGTATTACTTGCTTATCATGTATATATGCATGTAATGTATAACTCTTGAAAAATAGGTATCTAGGTAGTTTTAATTGTCAGTGAAAAATGATATATATGTATACGATCTACAGTTAAGTGCCTTAGAAATGGAGATGGAAAGTATGAAAGAAGAAAACAAAGCATTGAGGAAAGTGGTAGAACAAACAATGAAAGACTACTCTGATCTGCAAACAAAATTTTCAGTCATCCAAGAAAATAATAATAAAAGAAAGGTAAATTAAATCTGAATGTTAATTAATTTTCTTTATATATATACTCCGTCTCAAAATATAAGCAAAAATTGGTCAACAAAAGTTAATGTATTTGGTTCAAAATTTGTACCAGATACATTAACTTATATTGATTCATTTTTGCTTATATTTTGGGACAGAGGGAGTATATAGTCTTTATTGACTATCTATATATCATCCCTATTGTGTTTAATATAATAATAATTGATAGAGATCTCACTCAGCAGGATCGTCAACTTTCTCTCTCACTACAAGACAATAATGCAGCCACAAGTGGTGAAGGACCATCAAGATCATTTCATGAGATCTTTAGTCAAAAAATTCAAAGATCTTCATCTCCATTACCACCAAACAATATTACTGATGATGATAGTATAAGTGAGAGTGATTTGGGTTTGTCATTGAGGATGCAGACAATAAACACGTGTCAGAGAAATACTGAGGGAAATAAAGAAGGCAAAAAAGAACAATTGGGAAGTTTTGAATCAGTGCAGAATAAAATGCAAAGGGTACATGAGGTGCCTGGTGTTACTACTACTCATGCTGCTTATTCCCCTCCTAATAGAAAGGCTAGGGTTTCTGTTAGAGCAAGATGTGAAACTGCCACAGTGAGTTCAAAGTTCTTTTTTAAGATTTGTTTACTATATGATTTGATTAAGATTTTTTTATTTAAGATGAAACTAATTATTCTCATGGTTTTTTGAAAGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGTCCACGTGCCTACTATCGTTGTACTGTTGCTCCAGGCTGTCCAGTTAGGAAACAAGTATGTATTTATTCATTCTCAACTATTATTAATTTTATTTCGATCTTCTGCGGCAGCGCGGCTGCACCGTGTATTGGTTGCAAAGTCGTTGGATCAGGATGCAAATCTTGCATCCTAACCTAACAACTATGCGGTCACTCAGCACAAGATCTGATTTCTTTATCAATTAACCGGATCTTAAGAATTAATATATTTTTTAATTTTTGTTTATATATAGGTGCAAAGATGTATAGATGACATGTCTATACTAATTACAACATATGAAGGAACACATAACCATCCACTACCTGTTGGTGCAACTGCAATGGCTTCAACAGCTTCAGCAGCAGCTTCATTTATGTTACTAGATTCAAGCAATCCTAATATTTCAGATTATGGTTTCACAACCCAACAATCCTTTAATCCTTACACTAATAATAGCTTTCACCACCCATTAAACCAATCTTCAAATATTAGAAGCATCAACCCCAATGATCCATCCCAAGGAATTGTTTTTGACCTCACCAATAATAATAATAATGATGAGCTCAACGAACAGCGACGATTTTCTACTGCAGGTAGCTCCAGCTCCAATATTTCAACTGATCAACCTCGTTTTTCTTGGATGCAAAACAAATACCAACAGCAGAGTAGTACTAGCAATGCTAATATTGCAATGAACAATTTTCATAACCCTAGAGTACCACTGGATATTCATGATAGGGTTTGGAAAGGATCAGAAGAAAATAATAACAACAATGTGTCTGCAATTGCATCAGATCCTAAGTTTAGGCTTGCTGTTGCAGCTGCAATTTCATCACTCATGAATAAAGAAAGCAACAACACTACTACACATGGTAGCAACAATTGA
Protein sequence

>MS.gene028371.t1

MGREEESKKMEIDLSLKIDSDDDREEEVDHELVKEDDEKEEVHEATAGEIEDDASVIQLSLQDDTKMKQLSALEMEMESMKEENKALRKVVEQTMKDYSDLQTKFSVIQENNNKRKDRQLSLSLQDNNAATSGEGPSRSFHEIFSQKIQRSSSPLPPNNITDDDSISESDLGLSLRMQTINTCQRNTEGNKEGKKEQLGSFESVQNKMQRVHEVPGVTTTHAAYSPPNRKARVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCIDDMSILITTYEGTHNHPLPVGATAMASTASAAASFMLLDSSNPNISDYGFTTQQSFNPYTNNSFHHPLNQSSNIRSINPNDPSQGIVFDLTNNNNNDELNEQRRFSTAGSSSSNISTDQPRFSWMQNKYQQQSSTSNANIAMNNFHNPRVPLDIHDRVWKGSEENNNNNVSAIASDPKFRLAVAAAISSLMNKESNNTTTHGSNN