Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028417.t1 | XP_013457215.2 | 94 | 382 | 21 | 1 | 7 | 386 | 1 | 382 | 7.90E-151 | 543.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028417.t1 | A0A396IAU5 | 94.0 | 382 | 21 | 1 | 7 | 386 | 1 | 382 | 5.7e-151 | 543.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene028417.t1 | TF | C3H |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028417.t1 | MTR_4g094292 | 90.451 | 377 | 34 | 1 | 12 | 386 | 1 | 377 | 0.0 | 632 |
| MS.gene028417.t1 | MTR_4g094298 | 74.419 | 86 | 18 | 3 | 305 | 386 | 17 | 102 | 5.43e-36 | 127 |
| MS.gene028417.t1 | MTR_4g094358 | 75.862 | 58 | 12 | 1 | 305 | 360 | 17 | 74 | 6.07e-22 | 91.7 |
| MS.gene028417.t1 | MTR_6g033835 | 80.556 | 36 | 7 | 0 | 114 | 149 | 72 | 107 | 2.18e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 114 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCATTCAATTCTCCGATTTA+TGG | 0.116513 | 4.2:-18782494 | MS.gene028417:CDS |
| GCTTTCTTCAATTGAGAATT+TGG | 0.178850 | 4.2:-18782372 | MS.gene028417:CDS |
| TCAGGAACAATGCGGCTATC+TGG | 0.245914 | 4.2:+18778770 | None:intergenic |
| TACCTCAGATTTACTCTTCA+TGG | 0.246210 | 4.2:+18779073 | None:intergenic |
| CTTGATTGTGTAGGCACATA+TGG | 0.289435 | 4.2:-18778945 | MS.gene028417:intron |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4.2:+18778752 | None:intergenic |
| TCAGCTACTTCAGCGGATTC+AGG | 0.301044 | 4.2:+18778866 | None:intergenic |
| CCGTACTCCGGCAACAGTTC+AGG | 0.302302 | 4.2:-18782440 | MS.gene028417:CDS |
| TATTGTGATGGATGATATTC+AGG | 0.326560 | 4.2:-18782288 | MS.gene028417:CDS |
| TCATCATCATCTTCTTCTTC+CGG | 0.365609 | 4.2:-18782230 | MS.gene028417:CDS |
| GCATGAGTGCGATGAGGTTC+AGG | 0.378070 | 4.2:+18778797 | None:intergenic |
| GGAACTCTGTCTGAACCATT+TGG | 0.381458 | 4.2:+18778602 | None:intergenic |
| CTGTTCTTTCCTCCTGACAT+TGG | 0.382703 | 4.2:+18782260 | None:intergenic |
| CTGGACTCATCGTTGTTGAT+TGG | 0.383003 | 4.2:+18782621 | None:intergenic |
| TCAGGAACAATGCGGCTATC+CGG | 0.387048 | 4.2:+18778884 | None:intergenic |
| GCGGGAACAAACCTGGCATT+TGG | 0.389416 | 4.2:+18782106 | None:intergenic |
| GCCGAGAACTTCGACGTTAC+CGG | 0.389780 | 4.2:-18782581 | MS.gene028417:CDS |
| TGAAGAAGGTTTCCAAGTTA+AGG | 0.391044 | 4.2:-18782709 | MS.gene028417:CDS |
| AGGTTCAGGCGAAGCTGGTT+GGG | 0.411136 | 4.2:+18778697 | None:intergenic |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4.2:-18778746 | MS.gene028417:CDS |
| TCCGCTGAAGTAGCTGAATC+TGG | 0.412882 | 4.2:-18778860 | MS.gene028417:CDS |
| GCCTGAGTGTGATGAGGTTC+AGG | 0.415449 | 4.2:+18778683 | None:intergenic |
| TGCAGAGCATGGGAGGAATC+TGG | 0.420303 | 4.2:-18782146 | MS.gene028417:CDS |
| CTCGTTCGAAGTCCTTAACT+TGG | 0.422674 | 4.2:+18782697 | None:intergenic |
| AGGTTCAGGCGAAGCTGGTT+GGG | 0.424442 | 4.2:+18778811 | None:intergenic |
| GAACTCTGTCTGAACCATTT+GGG | 0.424835 | 4.2:+18778603 | None:intergenic |
| GTCGCTGATGGTGTTGGAAT+TGG | 0.433664 | 4.2:+18778661 | None:intergenic |
| GCCGGTAACGTCGAAGTTCT+CGG | 0.438838 | 4.2:+18782580 | None:intergenic |
| ATTGAGGTTGTCCTCCCAAA+TGG | 0.439687 | 4.2:-18778617 | MS.gene028417:CDS |
| TCATCTTCTTCTTCCGGTAG+AGG | 0.445192 | 4.2:-18782224 | MS.gene028417:CDS |
| CAGGAACAATGCGGCTATCT+GGG | 0.445665 | 4.2:+18778771 | None:intergenic |
| GCGGCGTAGGGTTGAAAACC+TGG | 0.445857 | 4.2:+18782602 | None:intergenic |
| TACTTACTGGAGCCATAAAT+CGG | 0.446103 | 4.2:+18782482 | None:intergenic |
| CTTAAACAACACACTCTTCG+AGG | 0.446531 | 4.2:+18782178 | None:intergenic |
| CGATGAGGTTCAGGCGAAGC+TGG | 0.453590 | 4.2:+18778806 | None:intergenic |
| CAGGAACAATGCGGCTATCC+GGG | 0.459450 | 4.2:+18778885 | None:intergenic |
| AGAAGGAGGTTTGCAGAGCA+TGG | 0.460342 | 4.2:-18782157 | MS.gene028417:CDS |
| CCTGAACTGTTGCCGGAGTA+CGG | 0.462019 | 4.2:+18782440 | None:intergenic |
| CTCTTCATGGAGAGACGACT+TGG | 0.464197 | 4.2:+18779086 | None:intergenic |
| GAGTGTGTTGTTTAAGAAGG+AGG | 0.464562 | 4.2:-18782171 | MS.gene028417:CDS |
| CATCAGCGACTGGTCACCTC+TGG | 0.465644 | 4.2:-18778648 | MS.gene028417:CDS |
| AGCGAGCTGCGACGGCGAGC+CGG | 0.471289 | 4.2:+18782562 | None:intergenic |
| AGAGCAGGACTGTGCTTGTA+TGG | 0.480071 | 4.2:-18778908 | MS.gene028417:CDS |
| TCACTGGATTTAGCAGAAAT+CGG | 0.480187 | 4.2:+18782518 | None:intergenic |
| TTGATTGTGTAGGCACATAT+GGG | 0.487743 | 4.2:-18778944 | MS.gene028417:intron |
| TCGAAGTTCTCGGCGGCGTA+GGG | 0.488149 | 4.2:+18782590 | None:intergenic |
| CGGAGAATTGAATGAGTCAC+TGG | 0.498104 | 4.2:+18782502 | None:intergenic |
| AACAATGCGGCTATCTGGGC+TGG | 0.504280 | 4.2:+18778775 | None:intergenic |
| GATGTATCAAACGCCGGTGA+AGG | 0.504339 | 4.2:-18782324 | MS.gene028417:CDS |
| GATGAAGCTCTTCTCTTCCG+TGG | 0.504434 | 4.2:+18779108 | None:intergenic |
| GAAGAGTGTGTTGTTTAAGA+AGG | 0.506801 | 4.2:-18782174 | MS.gene028417:CDS |
| CGTACTCCGGCAACAGTTCA+GGG | 0.510086 | 4.2:-18782439 | MS.gene028417:CDS |
| GTCGAAGTTCTCGGCGGCGT+AGG | 0.512563 | 4.2:+18782589 | None:intergenic |
| CTTGCAAGTCTTGTGACTAC+AGG | 0.513276 | 4.2:+18778722 | None:intergenic |
| GAAGGAGGTTTGCAGAGCAT+GGG | 0.513507 | 4.2:-18782156 | MS.gene028417:CDS |
| TGATGAGGTTCAGGCGAAGC+TGG | 0.516999 | 4.2:+18778692 | None:intergenic |
| TCATCCAACTCGATCATCAA+TGG | 0.518876 | 4.2:+18782665 | None:intergenic |
| GACTGGTCACCTCTGGATGA+TGG | 0.522863 | 4.2:-18778641 | MS.gene028417:CDS |
| GGAAGATGAAGAGCCTCTAC+CGG | 0.530743 | 4.2:+18782211 | None:intergenic |
| GAGGTTCAGGCGAAGCTGGT+TGG | 0.532007 | 4.2:+18778696 | None:intergenic |
| GAGGTTCAGGCGAAGCTGGT+TGG | 0.532007 | 4.2:+18778810 | None:intergenic |
| ATTCAGGTGAGGCCAATGTC+AGG | 0.532076 | 4.2:-18782272 | MS.gene028417:CDS |
| ATTGCAAGTCTTGTGACTAC+AGG | 0.536990 | 4.2:+18778836 | None:intergenic |
| AAGTATTTAGCGAGCTGCGA+CGG | 0.537721 | 4.2:+18782554 | None:intergenic |
| ATGAAGCTCTTCTCTTCCGT+GGG | 0.538111 | 4.2:+18779109 | None:intergenic |
| GGCAGATTATCTCCGAGAGC+AGG | 0.538911 | 4.2:-18778923 | MS.gene028417:CDS |
| GTTCAGACAGAGTTCCCTCT+AGG | 0.542921 | 4.2:-18778595 | MS.gene028417:CDS |
| GGAGGTTTGCAGAGCATGGG+AGG | 0.543989 | 4.2:-18782153 | MS.gene028417:CDS |
| TTTATGGCTCCAGTAAGTAC+AGG | 0.546704 | 4.2:-18782478 | MS.gene028417:CDS |
| CCGCTATGACTCCAAATGCC+AGG | 0.551499 | 4.2:-18782117 | MS.gene028417:intron |
| TTCGCCATTGATGATCGAGT+TGG | 0.551669 | 4.2:-18782669 | MS.gene028417:CDS |
| TACAAGCACAGTCCTGCTCT+CGG | 0.557055 | 4.2:+18778911 | None:intergenic |
| AGGACTGTGCTTGTATGGCC+CGG | 0.559322 | 4.2:-18778903 | MS.gene028417:CDS |
| CAATCAACAACGATGAGTCC+AGG | 0.566783 | 4.2:-18782620 | MS.gene028417:CDS |
| GAACAACAGCAAGATGAAGA+AGG | 0.574444 | 4.2:-18782723 | MS.gene028417:CDS |
| CAGAGGTGACCAGTCGCTGA+TGG | 0.576161 | 4.2:+18778649 | None:intergenic |
| TGACCAGTCGCTGATGGTGT+TGG | 0.577141 | 4.2:+18778655 | None:intergenic |
| ACCTCTGGATGATGGCATTG+AGG | 0.577145 | 4.2:-18778633 | MS.gene028417:CDS |
| TACTCCGGCAACAGTTCAGG+GGG | 0.579941 | 4.2:-18782437 | MS.gene028417:CDS |
| AAATTCTCAATTGAAGAAAG+CGG | 0.583951 | 4.2:+18782374 | None:intergenic |
| ATGTATCAAACGCCGGTGAA+GGG | 0.585801 | 4.2:-18782323 | MS.gene028417:CDS |
| TTCAGACAGAGTTCCCTCTA+GGG | 0.586505 | 4.2:-18778594 | MS.gene028417:CDS |
| ACTCTTCGAGGACGAAGAAG+AGG | 0.590723 | 4.2:+18782190 | None:intergenic |
| GCCTGAACCTCATCACACTC+AGG | 0.612021 | 4.2:-18778684 | MS.gene028417:CDS |
| GAATTGGCCTGAGTGTGATG+AGG | 0.612093 | 4.2:+18778677 | None:intergenic |
| ACTTCCTCACCACCCTTCAC+CGG | 0.613181 | 4.2:+18782311 | None:intergenic |
| GCATCAACTTCCTCCCTAGA+GGG | 0.614358 | 4.2:+18778581 | None:intergenic |
| CTCTGTCTGAACCATTTGGG+AGG | 0.615742 | 4.2:+18778606 | None:intergenic |
| CTCCATGAAGAGTAAATCTG+AGG | 0.616657 | 4.2:-18779075 | MS.gene028417:intron |
| ATTCCAACACCATCAGCGAC+TGG | 0.617264 | 4.2:-18778658 | MS.gene028417:CDS |
| AACGCCGGTGAAGGGTGGTG+AGG | 0.621390 | 4.2:-18782315 | MS.gene028417:CDS |
| TGCATCAACTTCCTCCCTAG+AGG | 0.621656 | 4.2:+18778580 | None:intergenic |
| TATCAAACGCCGGTGAAGGG+TGG | 0.628960 | 4.2:-18782320 | MS.gene028417:CDS |
| TGGTGAGGAAGTTATTGTGA+TGG | 0.633081 | 4.2:-18782300 | MS.gene028417:CDS |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4.2:+18778745 | None:intergenic |
| TCCAGATTCAGCTACTTCAG+CGG | 0.639551 | 4.2:+18778859 | None:intergenic |
| CTTCAATTGAGAATTTGGAG+AGG | 0.640144 | 4.2:-18782367 | MS.gene028417:CDS |
| AGACAGAGTTCCCTCTAGGG+AGG | 0.648644 | 4.2:-18778591 | MS.gene028417:CDS |
| GTACTCCGGCAACAGTTCAG+GGG | 0.653779 | 4.2:-18782438 | MS.gene028417:CDS |
| ACCTCAATGCCATCATCCAG+AGG | 0.655138 | 4.2:+18778632 | None:intergenic |
| TCCGCGGATGTATCAAACGC+CGG | 0.656349 | 4.2:-18782330 | MS.gene028417:CDS |
| GGAAGCAGCTCTCGTCTCCG+CGG | 0.669277 | 4.2:-18782346 | MS.gene028417:CDS |
| AATAGTAGCTTCAGTTCTCG+CGG | 0.669849 | 4.2:-18782413 | MS.gene028417:CDS |
| CAGGTGAGGCCAATGTCAGG+AGG | 0.674041 | 4.2:-18782269 | MS.gene028417:CDS |
| GAACTGTTGCCGGAGTACGG+TGG | 0.688179 | 4.2:+18782443 | None:intergenic |
| CCTGGCATTTGGAGTCATAG+CGG | 0.709847 | 4.2:+18782117 | None:intergenic |
| ACCGGCGTTTGATACATCCG+CGG | 0.714416 | 4.2:+18782329 | None:intergenic |
| ATCGAGTTGGATGATAACAG+AGG | 0.715067 | 4.2:-18782656 | MS.gene028417:CDS |
| GGGCTGGCATGAGTGCGATG+AGG | 0.717894 | 4.2:+18778791 | None:intergenic |
| TGATGGATGATATTCAGGTG+AGG | 0.744981 | 4.2:-18782283 | MS.gene028417:CDS |
| CAGCGGATTCAGGAACAATG+CGG | 0.756023 | 4.2:+18778762 | None:intergenic |
| CAGCGGATTCAGGAACAATG+CGG | 0.756023 | 4.2:+18778876 | None:intergenic |
| GGTAACGTCGAAGTTCTCGG+CGG | 0.777146 | 4.2:+18782583 | None:intergenic |
| ACTCCGGCAACAGTTCAGGG+GGG | 0.786022 | 4.2:-18782436 | MS.gene028417:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATCTTATTAAATTTGATAT+AGG | + | chr4.2:18780690-18780709 | None:intergenic | 10.0% |
| !!! | TTTATCTTTTGTTATAAAAA+TGG | - | chr4.2:18781475-18781494 | MS.gene028417:intron | 10.0% |
| !! | AAAAATAAGATAGTAATGTA+TGG | - | chr4.2:18780593-18780612 | MS.gene028417:intron | 15.0% |
| !! | AAAATAAGATAGTAATGTAT+GGG | - | chr4.2:18780594-18780613 | MS.gene028417:intron | 15.0% |
| !! | AAAGAAAAATTAAGAAGTAA+AGG | + | chr4.2:18780934-18780953 | None:intergenic | 15.0% |
| !! | AATTGAAGTAAATAAAAAAG+TGG | - | chr4.2:18781655-18781674 | MS.gene028417:intron | 15.0% |
| !! | GATGATTGTAATTAAAATTT+GGG | + | chr4.2:18780560-18780579 | None:intergenic | 15.0% |
| !! | TAAGAAAGAATATATTAAGA+TGG | - | chr4.2:18780142-18780161 | MS.gene028417:intron | 15.0% |
| !! | TACAACTCATTAAAATTATT+TGG | - | chr4.2:18781446-18781465 | MS.gene028417:intron | 15.0% |
| !! | TGATGATTGTAATTAAAATT+TGG | + | chr4.2:18780561-18780580 | None:intergenic | 15.0% |
| !! | TGTCTATTTAAATTAGAATT+AGG | + | chr4.2:18780793-18780812 | None:intergenic | 15.0% |
| !! | TTATATGTATTCTCTAATTA+AGG | - | chr4.2:18779324-18779343 | MS.gene028417:intron | 15.0% |
| !!! | AGAATTTTATTCATCTTAAT+TGG | - | chr4.2:18779258-18779277 | MS.gene028417:intron | 15.0% |
| !! | AAGATATTATTGTACTTCTA+TGG | - | chr4.2:18782043-18782062 | MS.gene028417:intron | 20.0% |
| !! | ATTAAACCATTTATCCAAAT+AGG | - | chr4.2:18781546-18781565 | MS.gene028417:intron | 20.0% |
| !! | CAATAATATCTTTCTTATAC+AGG | + | chr4.2:18782035-18782054 | None:intergenic | 20.0% |
| !! | CATTGAATTCATAATAGTTA+TGG | + | chr4.2:18779164-18779183 | None:intergenic | 20.0% |
| !! | TTTGTAGAATTGTATATTGA+GGG | - | chr4.2:18781252-18781271 | MS.gene028417:intron | 20.0% |
| !!! | ATCGATTAAGATAATTTTTG+TGG | - | chr4.2:18781872-18781891 | MS.gene028417:intron | 20.0% |
| !!! | TTTAGATTTTAGCATTTGTT+TGG | - | chr4.2:18779683-18779702 | MS.gene028417:intron | 20.0% |
| ! | AAATCAGAATAACCTATACT+TGG | + | chr4.2:18780282-18780301 | None:intergenic | 25.0% |
| ! | AAATTACAGTTAGTGAGTTA+TGG | - | chr4.2:18781785-18781804 | MS.gene028417:intron | 25.0% |
| ! | AAATTACTTTCCCAAAAACA+AGG | - | chr4.2:18780342-18780361 | MS.gene028417:intron | 25.0% |
| ! | AAATTCTCAATTGAAGAAAG+CGG | + | chr4.2:18778874-18778893 | None:intergenic | 25.0% |
| ! | AAATTGCGTTTATAAAGCAT+TGG | - | chr4.2:18779769-18779788 | MS.gene028417:intron | 25.0% |
| ! | AAGACAAACTCACTATAAAT+TGG | - | chr4.2:18780018-18780037 | MS.gene028417:intron | 25.0% |
| ! | ACTTATAGCATAAGTTCTTA+TGG | + | chr4.2:18781521-18781540 | None:intergenic | 25.0% |
| ! | AGATTCTTAATCAAACTATC+TGG | + | chr4.2:18781161-18781180 | None:intergenic | 25.0% |
| ! | CACTAGTTACTTGTTTAATT+GGG | - | chr4.2:18780224-18780243 | MS.gene028417:intron | 25.0% |
| ! | CTTTGTAGAATTGTATATTG+AGG | - | chr4.2:18781251-18781270 | MS.gene028417:intron | 25.0% |
| ! | GATAGTTTGATTAAGAATCT+TGG | - | chr4.2:18781161-18781180 | MS.gene028417:intron | 25.0% |
| ! | TAATGACACTAACTAATTGA+TGG | - | chr4.2:18781751-18781770 | MS.gene028417:intron | 25.0% |
| ! | TAATTAAGGTATGAGTTTGT+TGG | - | chr4.2:18779338-18779357 | MS.gene028417:intron | 25.0% |
| ! | TAGTAAATTTGCCTAAATCA+CGG | + | chr4.2:18779456-18779475 | None:intergenic | 25.0% |
| ! | TCACTAGTTACTTGTTTAAT+TGG | - | chr4.2:18780223-18780242 | MS.gene028417:intron | 25.0% |
| ! | TGAATTCATAATAGTTATGG+CGG | + | chr4.2:18779161-18779180 | None:intergenic | 25.0% |
| ! | TTAACTATTAAGTGCATGTT+TGG | - | chr4.2:18779397-18779416 | MS.gene028417:intron | 25.0% |
| ! | TTAGGTGTTTATTATGCTAA+AGG | + | chr4.2:18782227-18782246 | None:intergenic | 25.0% |
| !! | AACGAAAATAGACTGTATTT+TGG | - | chr4.2:18780819-18780838 | MS.gene028417:intron | 25.0% |
| !! | AATTCAATGATTCCTGTTTT+TGG | - | chr4.2:18779175-18779194 | MS.gene028417:intron | 25.0% |
| !! | AATTGCGTTTATAAAGCATT+GGG | - | chr4.2:18779770-18779789 | MS.gene028417:intron | 25.0% |
| !! | ATTTCATGGAGCAATAATTT+TGG | - | chr4.2:18780443-18780462 | MS.gene028417:intron | 25.0% |
| !! | GGTTGTTTCATTATAAATCT+AGG | - | chr4.2:18780366-18780385 | MS.gene028417:intron | 25.0% |
| !! | TTAGCATTTGTTTGGAATTA+CGG | - | chr4.2:18779691-18779710 | MS.gene028417:intron | 25.0% |
| !!! | TTGTTTTTGGGAAAGTAATT+TGG | + | chr4.2:18780343-18780362 | None:intergenic | 25.0% |
| AAAAAGTGGCATAGAATGAT+AGG | - | chr4.2:18781669-18781688 | MS.gene028417:intron | 30.0% | |
| AAAACACAACTTGCAAACAA+GGG | - | chr4.2:18779494-18779513 | MS.gene028417:intron | 30.0% | |
| AAAAGTGGCATAGAATGATA+GGG | - | chr4.2:18781670-18781689 | MS.gene028417:intron | 30.0% | |
| AAACAGCTTATGTAGTTATG+TGG | - | chr4.2:18781348-18781367 | MS.gene028417:intron | 30.0% | |
| ATCTTATCACAGAACATCTA+TGG | - | chr4.2:18781990-18782009 | MS.gene028417:intron | 30.0% | |
| CATAATAAACACCTAATCAG+CGG | - | chr4.2:18782231-18782250 | MS.gene028417:CDS | 30.0% | |
| GAAATTCCTTATGCACTAAA+AGG | + | chr4.2:18781036-18781055 | None:intergenic | 30.0% | |
| GAATTCATAATAGTTATGGC+GGG | + | chr4.2:18779160-18779179 | None:intergenic | 30.0% | |
| GATCATATATCGCACTTTAT+AGG | + | chr4.2:18779864-18779883 | None:intergenic | 30.0% | |
| GCTTTCTTCAATTGAGAATT+TGG | - | chr4.2:18778873-18778892 | MS.gene028417:CDS | 30.0% | |
| GTATAGAACTATAGATGTCA+AGG | + | chr4.2:18780958-18780977 | None:intergenic | 30.0% | |
| GTGATTTAGGCAAATTTACT+AGG | - | chr4.2:18779455-18779474 | MS.gene028417:intron | 30.0% | |
| GTGTTAGGCTTTCTATATAA+GGG | - | chr4.2:18781824-18781843 | MS.gene028417:intron | 30.0% | |
| GTTTATTATGCTAAAGGACA+AGG | + | chr4.2:18782221-18782240 | None:intergenic | 30.0% | |
| TAAAACACAACTTGCAAACA+AGG | - | chr4.2:18779493-18779512 | MS.gene028417:intron | 30.0% | |
| TACAAATACAACCCAAGAAA+AGG | + | chr4.2:18779552-18779571 | None:intergenic | 30.0% | |
| TATTGCTCCATGAAATTAAC+CGG | + | chr4.2:18780439-18780458 | None:intergenic | 30.0% | |
| TCATTCAATTCTCCGATTTA+TGG | - | chr4.2:18778751-18778770 | MS.gene028417:CDS | 30.0% | |
| TGTAGTTATGTGGAATTCTA+TGG | - | chr4.2:18781358-18781377 | MS.gene028417:intron | 30.0% | |
| TGTGTTAGGCTTTCTATATA+AGG | - | chr4.2:18781823-18781842 | MS.gene028417:intron | 30.0% | |
| TTAACCAGACTATGATACTA+GGG | - | chr4.2:18781123-18781142 | MS.gene028417:intron | 30.0% | |
| TTAATTTCTGCAATCTCTGT+TGG | - | chr4.2:18780990-18781009 | MS.gene028417:intron | 30.0% | |
| TTAGGTCCTATTTGGATAAA+TGG | + | chr4.2:18781555-18781574 | None:intergenic | 30.0% | |
| TTCTATATAAGGGAGTCATA+AGG | - | chr4.2:18781834-18781853 | MS.gene028417:intron | 30.0% | |
| TTGTATATTGAGGGTCTATT+TGG | - | chr4.2:18781261-18781280 | MS.gene028417:intron | 30.0% | |
| TTTGGGAAAGTAATTTGGTT+TGG | + | chr4.2:18780338-18780357 | None:intergenic | 30.0% | |
| ! | ACTATTTAGAGACCTTTTCT+TGG | - | chr4.2:18779537-18779556 | MS.gene028417:intron | 30.0% |
| ! | CTATTTAGAGACCTTTTCTT+GGG | - | chr4.2:18779538-18779557 | MS.gene028417:intron | 30.0% |
| ! | TTGGGAAAGTAATTTGGTTT+GGG | + | chr4.2:18780337-18780356 | None:intergenic | 30.0% |
| !! | AATGCTTGTTGATTTCTGAA+TGG | - | chr4.2:18781592-18781611 | MS.gene028417:intron | 30.0% |
| !! | AGGTTATTCTGATTTTGAGA+TGG | - | chr4.2:18780287-18780306 | MS.gene028417:intron | 30.0% |
| !! | AGTTAGTTGTTTGTTGTGTT+AGG | - | chr4.2:18781809-18781828 | MS.gene028417:intron | 30.0% |
| !! | ATGCTTGTTGATTTCTGAAT+GGG | - | chr4.2:18781593-18781612 | MS.gene028417:intron | 30.0% |
| !! | GTTGGTTTCTTTTCGTTTTT+TGG | - | chr4.2:18781008-18781027 | MS.gene028417:intron | 30.0% |
| !! | TATTGTGATGGATGATATTC+AGG | - | chr4.2:18778957-18778976 | MS.gene028417:intron | 30.0% |
| !! | TTTAGATCTTTTGAGTCCAT+GGG | + | chr4.2:18780623-18780642 | None:intergenic | 30.0% |
| !!! | AAGTTGTGTTTTAGTCCTTT+GGG | + | chr4.2:18779486-18779505 | None:intergenic | 30.0% |
| !!! | GAAGTTGATGCATACATTTT+TGG | - | chr4.2:18782676-18782695 | MS.gene028417:CDS | 30.0% |
| !!! | GGTTATTCTGATTTTGAGAT+GGG | - | chr4.2:18780288-18780307 | MS.gene028417:intron | 30.0% |
| AAAGTGGCATAGAATGATAG+GGG | - | chr4.2:18781671-18781690 | MS.gene028417:intron | 35.0% | |
| AAGCACCTGTAAAACTGTTT+GGG | - | chr4.2:18781314-18781333 | MS.gene028417:intron | 35.0% | |
| ATTGCTCCATGAAATTAACC+GGG | + | chr4.2:18780438-18780457 | None:intergenic | 35.0% | |
| ATTTACTAGGATTGTCCCAA+AGG | - | chr4.2:18779468-18779487 | MS.gene028417:intron | 35.0% | |
| CCATTCATAGCATTCATTCT+AGG | + | chr4.2:18780409-18780428 | None:intergenic | 35.0% | |
| CCTAGAATGAATGCTATGAA+TGG | - | chr4.2:18780406-18780425 | MS.gene028417:intron | 35.0% | |
| CTACTGTATACCTTCCTAAT+AGG | + | chr4.2:18781707-18781726 | None:intergenic | 35.0% | |
| CTTCAATTGAGAATTTGGAG+AGG | - | chr4.2:18778878-18778897 | MS.gene028417:CDS | 35.0% | |
| GCATTTCTTCTTGATTGTGT+AGG | - | chr4.2:18782291-18782310 | MS.gene028417:CDS | 35.0% | |
| GGCATAAATAATTTCCCATC+AGG | + | chr4.2:18779647-18779666 | None:intergenic | 35.0% | |
| GTCATAAGGTTAGTAGTAGA+AGG | - | chr4.2:18781848-18781867 | MS.gene028417:intron | 35.0% | |
| GTTAACCAGACTATGATACT+AGG | - | chr4.2:18781122-18781141 | MS.gene028417:intron | 35.0% | |
| TAAGCACCTGTAAAACTGTT+TGG | - | chr4.2:18781313-18781332 | MS.gene028417:intron | 35.0% | |
| TACCTCAGATTTACTCTTCA+TGG | + | chr4.2:18782175-18782194 | None:intergenic | 35.0% | |
| TACTTACTGGAGCCATAAAT+CGG | + | chr4.2:18778766-18778785 | None:intergenic | 35.0% | |
| TATCCAGCAATTCAACGTTT+AGG | + | chr4.2:18781573-18781592 | None:intergenic | 35.0% | |
| TATCGCACTTTATAGGTGTT+TGG | + | chr4.2:18779857-18779876 | None:intergenic | 35.0% | |
| TCAATTGAGATGCCAATATC+AGG | + | chr4.2:18780478-18780497 | None:intergenic | 35.0% | |
| TCACTGGATTTAGCAGAAAT+CGG | + | chr4.2:18778730-18778749 | None:intergenic | 35.0% | |
| TCATCATCATCTTCTTCTTC+CGG | - | chr4.2:18779015-18779034 | MS.gene028417:intron | 35.0% | |
| TGAAAACTGTCTCCTTGAAT+TGG | + | chr4.2:18780880-18780899 | None:intergenic | 35.0% | |
| TGAAGAAGGTTTCCAAGTTA+AGG | - | chr4.2:18778536-18778555 | MS.gene028417:CDS | 35.0% | |
| TGGCTCTCTTAAAAATTACG+AGG | - | chr4.2:18780162-18780181 | MS.gene028417:intron | 35.0% | |
| TGTAAGAGTAAAGTTCTCTC+CGG | + | chr4.2:18779956-18779975 | None:intergenic | 35.0% | |
| TTACTTTCCCAAAAACAAGG+TGG | - | chr4.2:18780345-18780364 | MS.gene028417:intron | 35.0% | |
| TTATTTCCATTAGCGCTCAA+TGG | - | chr4.2:18781404-18781423 | MS.gene028417:intron | 35.0% | |
| TTCAACGTTTAGGTCCTATT+TGG | + | chr4.2:18781563-18781582 | None:intergenic | 35.0% | |
| TTGATTGTGTAGGCACATAT+GGG | - | chr4.2:18782301-18782320 | MS.gene028417:CDS | 35.0% | |
| TTGATTTCTGAATGGGGAAT+GGG | - | chr4.2:18781600-18781619 | MS.gene028417:intron | 35.0% | |
| TTGCATCAAAAGCCAAAAAC+AGG | + | chr4.2:18779190-18779209 | None:intergenic | 35.0% | |
| ! | AACTGGTAGTCTTCTTTTAG+TGG | + | chr4.2:18782719-18782738 | None:intergenic | 35.0% |
| ! | AAGAAGACTACCAGTTTTTG+CGG | - | chr4.2:18782723-18782742 | MS.gene028417:CDS | 35.0% |
| ! | AGATAATTTTTGTGGAGTCC+AGG | - | chr4.2:18781880-18781899 | MS.gene028417:intron | 35.0% |
| ! | AGTAGTTCATTTTGTCCTGA+TGG | - | chr4.2:18779629-18779648 | MS.gene028417:intron | 35.0% |
| ! | CTATAGTTCTATACGCAGTT+GGG | - | chr4.2:18780964-18780983 | MS.gene028417:intron | 35.0% |
| ! | CTATTAGGAAGGTATACAGT+AGG | - | chr4.2:18781705-18781724 | MS.gene028417:intron | 35.0% |
| ! | GAAATACTTAACCGCTGATT+AGG | + | chr4.2:18782245-18782264 | None:intergenic | 35.0% |
| ! | GTAGTTCATTTTGTCCTGAT+GGG | - | chr4.2:18779630-18779649 | MS.gene028417:intron | 35.0% |
| ! | TCTATAGTTCTATACGCAGT+TGG | - | chr4.2:18780963-18780982 | MS.gene028417:intron | 35.0% |
| ! | TTGGTTCCTTTTAGTGCATA+AGG | - | chr4.2:18781027-18781046 | MS.gene028417:intron | 35.0% |
| ! | TTTTGCTAACCTGTACTTAC+TGG | + | chr4.2:18778779-18778798 | None:intergenic | 35.0% |
| !! | CTTTAGATCTTTTGAGTCCA+TGG | + | chr4.2:18780624-18780643 | None:intergenic | 35.0% |
| !! | GAAGAGTGTGTTGTTTAAGA+AGG | - | chr4.2:18779071-18779090 | MS.gene028417:intron | 35.0% |
| !! | TGCTTGTTGATTTCTGAATG+GGG | - | chr4.2:18781594-18781613 | MS.gene028417:intron | 35.0% |
| !! | TTAGATCTTTTGAGTCCATG+GGG | + | chr4.2:18780622-18780641 | None:intergenic | 35.0% |
| !! | TTGGTAGTGATTCCAAGTAT+AGG | - | chr4.2:18780267-18780286 | MS.gene028417:intron | 35.0% |
| !!! | CAAGTTGTGTTTTAGTCCTT+TGG | + | chr4.2:18779487-18779506 | None:intergenic | 35.0% |
| !!! | GAAACAACCACCTTGTTTTT+GGG | + | chr4.2:18780355-18780374 | None:intergenic | 35.0% |
| !!! | TGAAACAACCACCTTGTTTT+TGG | + | chr4.2:18780356-18780375 | None:intergenic | 35.0% |
| AAACTACCATTGAGCGCTAA+TGG | + | chr4.2:18781413-18781432 | None:intergenic | 40.0% | |
| AAACTGTCTCCTTGAATTGG+TGG | + | chr4.2:18780877-18780896 | None:intergenic | 40.0% | |
| AATAGTAGCTTCAGTTCTCG+CGG | - | chr4.2:18778832-18778851 | MS.gene028417:CDS | 40.0% | |
| ACAAAGAGAGAGAGAGTGAT+TGG | + | chr4.2:18781237-18781256 | None:intergenic | 40.0% | |
| ACTAGGATCTCCTATTAGGA+AGG | - | chr4.2:18781694-18781713 | MS.gene028417:intron | 40.0% | |
| AGGTGCGATGATTTACTTCA+CGG | + | chr4.2:18780074-18780093 | None:intergenic | 40.0% | |
| ATATCGCAATGCGTGTTCTA+AGG | + | chr4.2:18779932-18779951 | None:intergenic | 40.0% | |
| ATGTCCATAAGTGTGTAACG+TGG | - | chr4.2:18779981-18780000 | MS.gene028417:intron | 40.0% | |
| ATTGAGATGCCAATATCAGG+CGG | + | chr4.2:18780475-18780494 | None:intergenic | 40.0% | |
| CAACAGGCAAATTTCCTATC+TGG | + | chr4.2:18780250-18780269 | None:intergenic | 40.0% | |
| CACTATAAATTGGACCATCC+TGG | - | chr4.2:18780028-18780047 | MS.gene028417:intron | 40.0% | |
| CAGATAGGAAATTTGCCTGT+TGG | - | chr4.2:18780248-18780267 | MS.gene028417:intron | 40.0% | |
| CTAAAACAATCGCGCATTAG+AGG | + | chr4.2:18779668-18779687 | None:intergenic | 40.0% | |
| CTCCATGAAGAGTAAATCTG+AGG | - | chr4.2:18782170-18782189 | MS.gene028417:CDS | 40.0% | |
| CTTAAACAACACACTCTTCG+AGG | + | chr4.2:18779070-18779089 | None:intergenic | 40.0% | |
| CTTGATTGTGTAGGCACATA+TGG | - | chr4.2:18782300-18782319 | MS.gene028417:CDS | 40.0% | |
| CTTGTTTAATTGGGCCAGAT+AGG | - | chr4.2:18780233-18780252 | MS.gene028417:intron | 40.0% | |
| GAACAACAGCAAGATGAAGA+AGG | - | chr4.2:18778522-18778541 | MS.gene028417:CDS | 40.0% | |
| GAACTCTGTCTGAACCATTT+GGG | + | chr4.2:18782645-18782664 | None:intergenic | 40.0% | |
| GAAGTAAATCATCGCACCTA+CGG | - | chr4.2:18780075-18780094 | MS.gene028417:intron | 40.0% | |
| GTTACACACTTATGGACATC+TGG | + | chr4.2:18779980-18779999 | None:intergenic | 40.0% | |
| TACATTCGGATGCTAGAGTT+TGG | - | chr4.2:18781624-18781643 | MS.gene028417:intron | 40.0% | |
| TACTTGGAATCACTACCAAC+AGG | + | chr4.2:18780266-18780285 | None:intergenic | 40.0% | |
| TAGGTGTTTGGACACAGTTA+AGG | + | chr4.2:18779845-18779864 | None:intergenic | 40.0% | |
| TCATCCAACTCGATCATCAA+TGG | + | chr4.2:18778583-18778602 | None:intergenic | 40.0% | |
| TCATCCACGTTACACACTTA+TGG | + | chr4.2:18779988-18780007 | None:intergenic | 40.0% | |
| TGATTTCTGAATGGGGAATG+GGG | - | chr4.2:18781601-18781620 | MS.gene028417:intron | 40.0% | |
| TGGTGAGGAAGTTATTGTGA+TGG | - | chr4.2:18778945-18778964 | MS.gene028417:intron | 40.0% | |
| TTTATGGCTCCAGTAAGTAC+AGG | - | chr4.2:18778767-18778786 | MS.gene028417:CDS | 40.0% | |
| ! | AAGGAGACAGTTTTCATACG+AGG | - | chr4.2:18780884-18780903 | MS.gene028417:intron | 40.0% |
| ! | ATTGCAAGTCTTGTGACTAC+AGG | + | chr4.2:18782412-18782431 | None:intergenic | 40.0% |
| ! | CATTTGTTTGGAATTACGGC+GGG | - | chr4.2:18779695-18779714 | MS.gene028417:intron | 40.0% |
| ! | GCATTTGTTTGGAATTACGG+CGG | - | chr4.2:18779694-18779713 | MS.gene028417:intron | 40.0% |
| ! | GGTAGTCTTCTTTTAGTGGT+CGG | + | chr4.2:18782715-18782734 | None:intergenic | 40.0% |
| ! | GTTGATTTCTGAATGGGGAA+TGG | - | chr4.2:18781599-18781618 | MS.gene028417:intron | 40.0% |
| ! | TAGGAAGGTATACAGTAGGA+GGG | - | chr4.2:18781709-18781728 | MS.gene028417:intron | 40.0% |
| ! | TGAGTCTTTGTTGTCATTGC+TGG | - | chr4.2:18781089-18781108 | MS.gene028417:intron | 40.0% |
| ! | TGATGGATGATATTCAGGTG+AGG | - | chr4.2:18778962-18778981 | MS.gene028417:intron | 40.0% |
| ! | TTAGGAAGGTATACAGTAGG+AGG | - | chr4.2:18781708-18781727 | MS.gene028417:intron | 40.0% |
| ! | TTTCTAGTCAATCGCGCATT+AGG | + | chr4.2:18779728-18779747 | None:intergenic | 40.0% |
| !! | AATGCGTGTTCTAAGGTGTT+TGG | + | chr4.2:18779925-18779944 | None:intergenic | 40.0% |
| !! | ATCGAGTTGGATGATAACAG+AGG | - | chr4.2:18778589-18778608 | MS.gene028417:CDS | 40.0% |
| !! | CTATTGCTTTTGCCAAATCC+CGG | - | chr4.2:18779423-18779442 | MS.gene028417:intron | 40.0% |
| !! | GAGTGTGTTGTTTAAGAAGG+AGG | - | chr4.2:18779074-18779093 | MS.gene028417:intron | 40.0% |
| !! | GGATGCTTTACTGACTTGTT+TGG | + | chr4.2:18779824-18779843 | None:intergenic | 40.0% |
| AAGATCTCCGGTTCAAATCC+AGG | + | chr4.2:18780049-18780068 | None:intergenic | 45.0% | |
| AAGTATTTAGCGAGCTGCGA+CGG | + | chr4.2:18778694-18778713 | None:intergenic | 45.0% | |
| AATGGGGAATGGGGTACATT+CGG | - | chr4.2:18781610-18781629 | MS.gene028417:intron | 45.0% | |
| AGGTATACAGTAGGAGGGAT+AGG | - | chr4.2:18781714-18781733 | MS.gene028417:intron | 45.0% | |
| AGTAATGTATGGGTACCCCA+TGG | - | chr4.2:18780604-18780623 | MS.gene028417:intron | 45.0% | |
| ATACAGTAGGAGGGATAGGA+GGG | - | chr4.2:18781718-18781737 | MS.gene028417:intron | 45.0% | |
| ATGAAGCTCTTCTCTTCCGT+GGG | + | chr4.2:18782139-18782158 | None:intergenic | 45.0% | |
| ATGTATCAAACGCCGGTGAA+GGG | - | chr4.2:18778922-18778941 | MS.gene028417:CDS | 45.0% | |
| ATTGAGGTTGTCCTCCCAAA+TGG | - | chr4.2:18782628-18782647 | MS.gene028417:CDS | 45.0% | |
| CAAACTATCTGGCCACACTT+TGG | + | chr4.2:18781150-18781169 | None:intergenic | 45.0% | |
| CAATCAACAACGATGAGTCC+AGG | - | chr4.2:18778625-18778644 | MS.gene028417:CDS | 45.0% | |
| CACCTACGGTCTATCCAATT+GGG | - | chr4.2:18780089-18780108 | MS.gene028417:intron | 45.0% | |
| CCAGACACATACACCCTTAT+TGG | + | chr4.2:18779594-18779613 | None:intergenic | 45.0% | |
| CGGAGAATTGAATGAGTCAC+TGG | + | chr4.2:18778746-18778765 | None:intergenic | 45.0% | |
| CGTTGCGACAAAATTTCTCG+CGG | + | chr4.2:18779796-18779815 | None:intergenic | 45.0% | |
| CTCGTTCGAAGTCCTTAACT+TGG | + | chr4.2:18778551-18778570 | None:intergenic | 45.0% | |
| CTGCAACCCGGTTAATTTCA+TGG | - | chr4.2:18780429-18780448 | MS.gene028417:intron | 45.0% | |
| CTGGACTCATCGTTGTTGAT+TGG | + | chr4.2:18778627-18778646 | None:intergenic | 45.0% | |
| CTGTTCTTTCCTCCTGACAT+TGG | + | chr4.2:18778988-18779007 | None:intergenic | 45.0% | |
| GAACACGCATTGCGATATAC+CGG | - | chr4.2:18779934-18779953 | MS.gene028417:intron | 45.0% | |
| GCATAGAATGATAGGGGACT+AGG | - | chr4.2:18781677-18781696 | MS.gene028417:intron | 45.0% | |
| GGAACTCTGTCTGAACCATT+TGG | + | chr4.2:18782646-18782665 | None:intergenic | 45.0% | |
| GGACCTAAACGTTGAATTGC+TGG | - | chr4.2:18781567-18781586 | MS.gene028417:intron | 45.0% | |
| GGTTTCCTTCCACCAATTCA+AGG | - | chr4.2:18780865-18780884 | MS.gene028417:intron | 45.0% | |
| GTAACAGAATGTCAGAGACC+TGG | + | chr4.2:18781901-18781920 | None:intergenic | 45.0% | |
| TACTTCACGGACAAGATCTC+CGG | + | chr4.2:18780061-18780080 | None:intergenic | 45.0% | |
| TATACAGTAGGAGGGATAGG+AGG | - | chr4.2:18781717-18781736 | MS.gene028417:intron | 45.0% | |
| TCATCTTCTTCTTCCGGTAG+AGG | - | chr4.2:18779021-18779040 | MS.gene028417:intron | 45.0% | |
| TCCAGATTCAGCTACTTCAG+CGG | + | chr4.2:18782389-18782408 | None:intergenic | 45.0% | |
| TGACGTCACGACTCCAATAA+GGG | - | chr4.2:18779578-18779597 | MS.gene028417:intron | 45.0% | |
| TGATACTAGGGTCCAAAGTG+TGG | - | chr4.2:18781135-18781154 | MS.gene028417:intron | 45.0% | |
| TGGACCCTAGTATCATAGTC+TGG | + | chr4.2:18781130-18781149 | None:intergenic | 45.0% | |
| TGGTATGATCCGCCTGATAT+TGG | - | chr4.2:18780463-18780482 | MS.gene028417:intron | 45.0% | |
| TGTCATTGCTGGACACGTAT+TGG | - | chr4.2:18781100-18781119 | MS.gene028417:intron | 45.0% | |
| TGTCTCCTTGAATTGGTGGA+AGG | + | chr4.2:18780873-18780892 | None:intergenic | 45.0% | |
| TTCAGACAGAGTTCCCTCTA+GGG | - | chr4.2:18782651-18782670 | MS.gene028417:CDS | 45.0% | |
| TTGCAAGCAAGCATCCTTGT+AGG | - | chr4.2:18780844-18780863 | MS.gene028417:intron | 45.0% | |
| TTGGTGGAAGGAAACCTACA+AGG | + | chr4.2:18780861-18780880 | None:intergenic | 45.0% | |
| ! | ATCCTTTTGCAGTTTGCCCA+CGG | - | chr4.2:18782120-18782139 | MS.gene028417:CDS | 45.0% |
| ! | CCAATAAGGGTGTATGTGTC+TGG | - | chr4.2:18779591-18779610 | MS.gene028417:intron | 45.0% |
| ! | CTTGCAAGTCTTGTGACTAC+AGG | + | chr4.2:18782526-18782545 | None:intergenic | 45.0% |
| ! | GCTCTCCCAAACAGTTTTAC+AGG | + | chr4.2:18781322-18781341 | None:intergenic | 45.0% |
| ! | TTCGCCATTGATGATCGAGT+TGG | - | chr4.2:18778576-18778595 | MS.gene028417:CDS | 45.0% |
| ACCTCAATGCCATCATCCAG+AGG | + | chr4.2:18782616-18782635 | None:intergenic | 50.0% | |
| ACTCTTCGAGGACGAAGAAG+AGG | + | chr4.2:18779058-18779077 | None:intergenic | 50.0% | |
| AGAAGGAGGTTTGCAGAGCA+TGG | - | chr4.2:18779088-18779107 | MS.gene028417:CDS | 50.0% | |
| AGAGCAGGACTGTGCTTGTA+TGG | - | chr4.2:18782337-18782356 | MS.gene028417:CDS | 50.0% | |
| ATACCTGACTGTCGCAAGAG+CGG | + | chr4.2:18780196-18780215 | None:intergenic | 50.0% | |
| ATTCAGGTGAGGCCAATGTC+AGG | - | chr4.2:18778973-18778992 | MS.gene028417:intron | 50.0% | |
| ATTCCAACACCATCAGCGAC+TGG | - | chr4.2:18782587-18782606 | MS.gene028417:CDS | 50.0% | |
| CAGGAACAATGCGGCTATCT+GGG | + | chr4.2:18782477-18782496 | None:intergenic | 50.0% | |
| CTCCCAATTGGATAGACCGT+AGG | + | chr4.2:18780094-18780113 | None:intergenic | 50.0% | |
| CTCTGTCTGAACCATTTGGG+AGG | + | chr4.2:18782642-18782661 | None:intergenic | 50.0% | |
| CTCTTCATGGAGAGACGACT+TGG | + | chr4.2:18782162-18782181 | None:intergenic | 50.0% | |
| CTGACGTCACGACTCCAATA+AGG | - | chr4.2:18779577-18779596 | MS.gene028417:intron | 50.0% | |
| GAAGGAGGTTTGCAGAGCAT+GGG | - | chr4.2:18779089-18779108 | MS.gene028417:CDS | 50.0% | |
| GATGAAGCTCTTCTCTTCCG+TGG | + | chr4.2:18782140-18782159 | None:intergenic | 50.0% | |
| GATGTATCAAACGCCGGTGA+AGG | - | chr4.2:18778921-18778940 | MS.gene028417:CDS | 50.0% | |
| GCACCTACGGTCTATCCAAT+TGG | - | chr4.2:18780088-18780107 | MS.gene028417:intron | 50.0% | |
| GCATCAACTTCCTCCCTAGA+GGG | + | chr4.2:18782667-18782686 | None:intergenic | 50.0% | |
| GGAAGATGAAGAGCCTCTAC+CGG | + | chr4.2:18779037-18779056 | None:intergenic | 50.0% | |
| GGACCATCCTGGATTTGAAC+CGG | - | chr4.2:18780039-18780058 | MS.gene028417:intron | 50.0% | |
| GGGGACTAGGATCTCCTATT+AGG | - | chr4.2:18781690-18781709 | MS.gene028417:intron | 50.0% | |
| GGTCTATCCAATTGGGAGTG+AGG | - | chr4.2:18780096-18780115 | MS.gene028417:intron | 50.0% | |
| GTTCAGACAGAGTTCCCTCT+AGG | - | chr4.2:18782650-18782669 | MS.gene028417:CDS | 50.0% | |
| TACAAGCACAGTCCTGCTCT+CGG | + | chr4.2:18782337-18782356 | None:intergenic | 50.0% | |
| TCAGGAACAATGCGGCTATC+CGG | + | chr4.2:18782364-18782383 | None:intergenic | 50.0% | |
| TCAGGAACAATGCGGCTATC+TGG | + | chr4.2:18782364-18782383 | None:intergenic | 50.0% | |
| TCCGCTGAAGTAGCTGAATC+TGG | - | chr4.2:18782385-18782404 | MS.gene028417:CDS | 50.0% | |
| TCTCCGGTTCAAATCCAGGA+TGG | + | chr4.2:18780045-18780064 | None:intergenic | 50.0% | |
| TGCATCAACTTCCTCCCTAG+AGG | + | chr4.2:18782668-18782687 | None:intergenic | 50.0% | |
| TGCTATGAATGGCTGCAACC+CGG | - | chr4.2:18780417-18780436 | MS.gene028417:intron | 50.0% | |
| TTCCGTGGGCAAACTGCAAA+AGG | + | chr4.2:18782125-18782144 | None:intergenic | 50.0% | |
| ! | ACCTCTGGATGATGGCATTG+AGG | - | chr4.2:18782612-18782631 | MS.gene028417:CDS | 50.0% |
| ! | AGTTATGGCGGGAACAAACC+TGG | + | chr4.2:18779149-18779168 | None:intergenic | 50.0% |
| ! | AGTTTTTGCGGCACTTTGCG+AGG | - | chr4.2:18782735-18782754 | MS.gene028417:CDS | 50.0% |
| ! | CAGCGGATTCAGGAACAATG+CGG | + | chr4.2:18782372-18782391 | None:intergenic | 50.0% |
| ! | CCTGGCATTTGGAGTCATAG+CGG | + | chr4.2:18779131-18779150 | None:intergenic | 50.0% |
| ! | GAATTGGCCTGAGTGTGATG+AGG | + | chr4.2:18782571-18782590 | None:intergenic | 50.0% |
| ! | GTCGCTGATGGTGTTGGAAT+TGG | + | chr4.2:18782587-18782606 | None:intergenic | 50.0% |
| ! | TAAGGGTGTATGTGTCTGGC+AGG | - | chr4.2:18779595-18779614 | MS.gene028417:intron | 50.0% |
| ! | TACGAGGTTTGCTTCTCTGC+AGG | - | chr4.2:18780900-18780919 | MS.gene028417:intron | 50.0% |
| ! | TCAGCTACTTCAGCGGATTC+AGG | + | chr4.2:18782382-18782401 | None:intergenic | 50.0% |
| !! | TCGCAAAGTGCCGCAAAAAC+TGG | + | chr4.2:18782736-18782755 | None:intergenic | 50.0% |
| AACAATGCGGCTATCTGGGC+TGG | + | chr4.2:18782473-18782492 | None:intergenic | 55.0% | |
| ACCGGCGTTTGATACATCCG+CGG | + | chr4.2:18778919-18778938 | None:intergenic | 55.0% | |
| ACTTCCTCACCACCCTTCAC+CGG | + | chr4.2:18778937-18778956 | None:intergenic | 55.0% | |
| AGGACTGTGCTTGTATGGCC+CGG | - | chr4.2:18782342-18782361 | MS.gene028417:CDS | 55.0% | |
| AGGTTCAGGCGAAGCTGGTT+GGG | + | chr4.2:18782437-18782456 | None:intergenic | 55.0% | |
| ATTCCCCCCTGAACTGTTGC+CGG | + | chr4.2:18778815-18778834 | None:intergenic | 55.0% | |
| CAGGAACAATGCGGCTATCC+GGG | + | chr4.2:18782363-18782382 | None:intergenic | 55.0% | |
| CCGCTATGACTCCAAATGCC+AGG | - | chr4.2:18779128-18779147 | MS.gene028417:intron | 55.0% | |
| CCTAAATCACGGTGAGACGC+CGG | + | chr4.2:18779445-18779464 | None:intergenic | 55.0% | |
| CCTGAACTGTTGCCGGAGTA+CGG | + | chr4.2:18778808-18778827 | None:intergenic | 55.0% | |
| CGTACTCCGGCAACAGTTCA+GGG | - | chr4.2:18778806-18778825 | MS.gene028417:CDS | 55.0% | |
| CTAAATCACGGTGAGACGCC+GGG | + | chr4.2:18779444-18779463 | None:intergenic | 55.0% | |
| GCAAAAACGCCACCGTACTC+CGG | - | chr4.2:18778793-18778812 | MS.gene028417:CDS | 55.0% | |
| GCATGAGTGCGATGAGGTTC+AGG | + | chr4.2:18782451-18782470 | None:intergenic | 55.0% | |
| GCCGAGAACTTCGACGTTAC+CGG | - | chr4.2:18778664-18778683 | MS.gene028417:CDS | 55.0% | |
| GCCGGTAACGTCGAAGTTCT+CGG | + | chr4.2:18778668-18778687 | None:intergenic | 55.0% | |
| GCCTGAACCTCATCACACTC+AGG | - | chr4.2:18782561-18782580 | MS.gene028417:CDS | 55.0% | |
| GCCTGAGTGTGATGAGGTTC+AGG | + | chr4.2:18782565-18782584 | None:intergenic | 55.0% | |
| GCGGGAACAAACCTGGCATT+TGG | + | chr4.2:18779142-18779161 | None:intergenic | 55.0% | |
| GGCAGATTATCTCCGAGAGC+AGG | - | chr4.2:18782322-18782341 | MS.gene028417:CDS | 55.0% | |
| GGTAACGTCGAAGTTCTCGG+CGG | + | chr4.2:18778665-18778684 | None:intergenic | 55.0% | |
| GTACTCCGGCAACAGTTCAG+GGG | - | chr4.2:18778807-18778826 | MS.gene028417:CDS | 55.0% | |
| TACTCCGGCAACAGTTCAGG+GGG | - | chr4.2:18778808-18778827 | MS.gene028417:CDS | 55.0% | |
| TATCAAACGCCGGTGAAGGG+TGG | - | chr4.2:18778925-18778944 | MS.gene028417:CDS | 55.0% | |
| TCCGCGGATGTATCAAACGC+CGG | - | chr4.2:18778915-18778934 | MS.gene028417:CDS | 55.0% | |
| TGAGGCGCGCAAAAATGCTG+CGG | - | chr4.2:18780114-18780133 | MS.gene028417:intron | 55.0% | |
| TGATGAGGTTCAGGCGAAGC+TGG | + | chr4.2:18782556-18782575 | None:intergenic | 55.0% | |
| TGCAGAGCATGGGAGGAATC+TGG | - | chr4.2:18779099-18779118 | MS.gene028417:CDS | 55.0% | |
| ! | AGACAGAGTTCCCTCTAGGG+AGG | - | chr4.2:18782654-18782673 | MS.gene028417:CDS | 55.0% |
| ! | GACTGGTCACCTCTGGATGA+TGG | - | chr4.2:18782604-18782623 | MS.gene028417:CDS | 55.0% |
| ! | TGACCAGTCGCTGATGGTGT+TGG | + | chr4.2:18782593-18782612 | None:intergenic | 55.0% |
| ACTCCGGCAACAGTTCAGGG+GGG | - | chr4.2:18778809-18778828 | MS.gene028417:CDS | 60.0% | |
| CAGAGGTGACCAGTCGCTGA+TGG | + | chr4.2:18782599-18782618 | None:intergenic | 60.0% | |
| CAGGTGAGGCCAATGTCAGG+AGG | - | chr4.2:18778976-18778995 | MS.gene028417:intron | 60.0% | |
| CCGGCGTCTCACCGTGATTT+AGG | - | chr4.2:18779442-18779461 | MS.gene028417:intron | 60.0% | |
| CCGTACTCCGGCAACAGTTC+AGG | - | chr4.2:18778805-18778824 | MS.gene028417:CDS | 60.0% | |
| CGATGAGGTTCAGGCGAAGC+TGG | + | chr4.2:18782442-18782461 | None:intergenic | 60.0% | |
| GAACTGTTGCCGGAGTACGG+TGG | + | chr4.2:18778805-18778824 | None:intergenic | 60.0% | |
| GACTGTCGCAAGAGCGGTGA+GGG | + | chr4.2:18780190-18780209 | None:intergenic | 60.0% | |
| GAGGTTCAGGCGAAGCTGGT+TGG | + | chr4.2:18782438-18782457 | None:intergenic | 60.0% | |
| GCGGCGTAGGGTTGAAAACC+TGG | + | chr4.2:18778646-18778665 | None:intergenic | 60.0% | |
| GGAGGTTTGCAGAGCATGGG+AGG | - | chr4.2:18779092-18779111 | MS.gene028417:CDS | 60.0% | |
| TCACCGCTCTTGCGACAGTC+AGG | - | chr4.2:18780190-18780209 | MS.gene028417:intron | 60.0% | |
| TCGAAGTTCTCGGCGGCGTA+GGG | + | chr4.2:18778658-18778677 | None:intergenic | 60.0% | |
| TGACTGTCGCAAGAGCGGTG+AGG | + | chr4.2:18780191-18780210 | None:intergenic | 60.0% | |
| TTGCGCGCCTCACTCCCAAT+TGG | + | chr4.2:18780106-18780125 | None:intergenic | 60.0% | |
| ! | CATCAGCGACTGGTCACCTC+TGG | - | chr4.2:18782597-18782616 | MS.gene028417:CDS | 60.0% |
| AACGCCGGTGAAGGGTGGTG+AGG | - | chr4.2:18778930-18778949 | MS.gene028417:CDS | 65.0% | |
| CACGGTGAGACGCCGGGATT+TGG | + | chr4.2:18779438-18779457 | None:intergenic | 65.0% | |
| GGAAGCAGCTCTCGTCTCCG+CGG | - | chr4.2:18778899-18778918 | MS.gene028417:CDS | 65.0% | |
| GTCGAAGTTCTCGGCGGCGT+AGG | + | chr4.2:18778659-18778678 | None:intergenic | 65.0% | |
| ! | GGGCTGGCATGAGTGCGATG+AGG | + | chr4.2:18782457-18782476 | None:intergenic | 65.0% |
| AGCGAGCTGCGACGGCGAGC+CGG | + | chr4.2:18778686-18778705 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 18778502 | 18782765 | 18778502 | ID=MS.gene028417 |
| chr4.2 | mRNA | 18778502 | 18782765 | 18778502 | ID=MS.gene028417.t1;Parent=MS.gene028417 |
| chr4.2 | exon | 18782118 | 18782765 | 18782118 | ID=MS.gene028417.t1.exon1;Parent=MS.gene028417.t1 |
| chr4.2 | CDS | 18782118 | 18782765 | 18782118 | ID=cds.MS.gene028417.t1;Parent=MS.gene028417.t1 |
| chr4.2 | exon | 18779076 | 18779135 | 18779076 | ID=MS.gene028417.t1.exon2;Parent=MS.gene028417.t1 |
| chr4.2 | CDS | 18779076 | 18779135 | 18779076 | ID=cds.MS.gene028417.t1;Parent=MS.gene028417.t1 |
| chr4.2 | exon | 18778502 | 18778954 | 18778502 | ID=MS.gene028417.t1.exon3;Parent=MS.gene028417.t1 |
| chr4.2 | CDS | 18778502 | 18778954 | 18778502 | ID=cds.MS.gene028417.t1;Parent=MS.gene028417.t1 |
| Gene Sequence |
| Protein sequence |
