Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028492.t1 | XP_003608402.1 | 92.8 | 334 | 23 | 1 | 1 | 333 | 1 | 334 | 2.90E-170 | 607.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028492.t1 | Q8H1G0 | 58.0 | 188 | 71 | 2 | 40 | 220 | 80 | 266 | 1.5e-45 | 184.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028492.t1 | G7JV51 | 92.8 | 334 | 23 | 1 | 1 | 333 | 1 | 334 | 2.1e-170 | 607.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene028492.t1 | TF | C2C2-GATA |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028492.t1 | MTR_4g093730 | 92.814 | 334 | 23 | 1 | 1 | 333 | 1 | 334 | 0.0 | 642 |
| MS.gene028492.t1 | MTR_3g100040 | 47.039 | 304 | 126 | 9 | 40 | 318 | 66 | 359 | 1.31e-74 | 234 |
| MS.gene028492.t1 | MTR_3g100040 | 44.528 | 265 | 112 | 9 | 79 | 318 | 1 | 255 | 8.21e-57 | 185 |
| MS.gene028492.t1 | MTR_3g100050 | 43.478 | 276 | 118 | 8 | 5 | 268 | 33 | 282 | 1.28e-56 | 186 |
| MS.gene028492.t1 | MTR_5g066510 | 54.054 | 185 | 68 | 6 | 41 | 219 | 72 | 245 | 4.57e-56 | 184 |
| MS.gene028492.t1 | MTR_5g066510 | 51.538 | 130 | 49 | 5 | 41 | 164 | 72 | 193 | 4.02e-30 | 114 |
| MS.gene028492.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 1.73e-18 | 85.1 |
| MS.gene028492.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 4.32e-18 | 84.7 |
| MS.gene028492.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 5.68e-18 | 84.3 |
| MS.gene028492.t1 | MTR_3g060200 | 46.602 | 103 | 44 | 4 | 140 | 235 | 11 | 109 | 5.93e-18 | 85.1 |
| MS.gene028492.t1 | MTR_4g008070 | 48.101 | 79 | 34 | 2 | 140 | 211 | 1 | 79 | 9.94e-15 | 69.3 |
| MS.gene028492.t1 | MTR_4g008090 | 47.368 | 76 | 37 | 1 | 62 | 137 | 12 | 84 | 2.90e-13 | 66.2 |
| MS.gene028492.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 389 | 435 | 1.33e-12 | 68.6 |
| MS.gene028492.t1 | MTR_3g037390 | 63.830 | 47 | 17 | 0 | 103 | 149 | 493 | 539 | 1.85e-12 | 68.6 |
| MS.gene028492.t1 | MTR_4g108880 | 64.444 | 45 | 16 | 0 | 104 | 148 | 501 | 545 | 1.03e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene028492.t1 | AT1G51600 | 57.979 | 188 | 71 | 2 | 40 | 220 | 80 | 266 | 8.28e-63 | 202 |
| MS.gene028492.t1 | AT1G51600 | 57.979 | 188 | 71 | 2 | 40 | 220 | 80 | 266 | 8.28e-63 | 202 |
| MS.gene028492.t1 | AT3G21175 | 55.263 | 190 | 75 | 3 | 38 | 220 | 74 | 260 | 8.21e-61 | 196 |
| MS.gene028492.t1 | AT3G21175 | 54.737 | 190 | 78 | 2 | 38 | 220 | 74 | 262 | 8.89e-61 | 196 |
| MS.gene028492.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 5.95e-51 | 171 |
| MS.gene028492.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 5.95e-51 | 171 |
| MS.gene028492.t1 | AT4G24470 | 47.442 | 215 | 96 | 6 | 19 | 230 | 63 | 263 | 6.06e-51 | 172 |
| MS.gene028492.t1 | AT3G21175 | 57.018 | 114 | 46 | 2 | 38 | 151 | 74 | 184 | 4.47e-33 | 122 |
Find 83 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTGAAACTCACGTGGATTC+TGG | 0.203921 | 4.1:-20162662 | None:intergenic |
| CGGGCTCATGTGGGCAAATA+AGG | 0.235102 | 4.1:+20162883 | MS.gene028492:CDS |
| CAAGCATTGCATAGAGTTCT+TGG | 0.242885 | 4.1:-20162860 | None:intergenic |
| ACCTCTCAGCAAGCTCTTTA+CGG | 0.268811 | 4.1:-20162052 | None:intergenic |
| AGGATTACAGGATAATATTA+TGG | 0.274171 | 4.1:+20164702 | MS.gene028492:intron |
| ACTGAATTTGAGATTCCTTT+AGG | 0.291144 | 4.1:+20164748 | MS.gene028492:CDS |
| AGCAAAACTGTCGGGACATT+TGG | 0.300350 | 4.1:+20161818 | MS.gene028492:CDS |
| ATTCCAATATGAGGATTTAC+TGG | 0.333408 | 4.1:+20164884 | MS.gene028492:CDS |
| TCCGTGAAAGCTTTGAATTA+CGG | 0.336575 | 4.1:-20161956 | None:intergenic |
| TTGGCAAAGGCTTTGTTTCA+TGG | 0.339952 | 4.1:-20163872 | None:intergenic |
| GCTGTATTGTTACTCTTAGA+TGG | 0.341296 | 4.1:+20161751 | MS.gene028492:CDS |
| GGAGATCTGCATCACTTGTT+AGG | 0.347795 | 4.1:+20161976 | MS.gene028492:CDS |
| GAACTCTATGCAATGCTTGC+GGG | 0.368924 | 4.1:+20162864 | MS.gene028492:CDS |
| TTGAAACTCACGTGGATTCT+GGG | 0.390836 | 4.1:-20162661 | None:intergenic |
| TGGCAAAGGCTTTGTTTCAT+GGG | 0.392126 | 4.1:-20163871 | None:intergenic |
| GCAATGCTTGCGGGCTCATG+TGG | 0.395096 | 4.1:+20162873 | MS.gene028492:CDS |
| GCAAAACTGTCGGGACATTT+GGG | 0.401442 | 4.1:+20161819 | MS.gene028492:CDS |
| GCCGGGCCTCGACGCATTAC+CGG | 0.406758 | 4.1:-20162833 | None:intergenic |
| GAACTCACCATTTCCTTTGA+AGG | 0.410545 | 4.1:+20161324 | MS.gene028492:CDS |
| AGATGCCAGCATTGTGGAAT+TGG | 0.421996 | 4.1:+20162797 | MS.gene028492:CDS |
| CAGCCAGTAAATCCTCATAT+TGG | 0.426340 | 4.1:-20164887 | None:intergenic |
| CCCTTCCGTTACGCCAGAAA+AGG | 0.437686 | 4.1:+20161362 | MS.gene028492:CDS |
| AGAAAATTCATGTGCTGCAC+AGG | 0.441655 | 4.1:+20163693 | MS.gene028492:CDS |
| ACCTGCTCAATTATCATCTC+AGG | 0.443550 | 4.1:-20163912 | None:intergenic |
| CAAGAGCATTATTCTCCACT+TGG | 0.451852 | 4.1:-20164520 | None:intergenic |
| GAGTGGAACAGAAGCGGTAA+TGG | 0.454383 | 4.1:-20161289 | None:intergenic |
| TCCGTAATTCAAAGCTTTCA+CGG | 0.456528 | 4.1:+20161955 | MS.gene028492:CDS |
| ATGCTGAATTCGTCTGAGAA+TGG | 0.460337 | 4.1:+20161204 | MS.gene028492:CDS |
| TGCTGAATTCGTCTGAGAAT+GGG | 0.470907 | 4.1:+20161205 | MS.gene028492:CDS |
| AATAGGATGCAACGGAAGAA+TGG | 0.473196 | 4.1:+20162566 | MS.gene028492:intron |
| GGCAAAGGCTTTGTTTCATG+GGG | 0.473835 | 4.1:-20163870 | None:intergenic |
| AACCTCGCCTTCAAAGGAAA+TGG | 0.478631 | 4.1:-20161331 | None:intergenic |
| CAGTTCTCCTGCTGAAAACC+AGG | 0.478700 | 4.1:+20162616 | MS.gene028492:CDS |
| AGTGGAACAGAAGCGGTAAT+GGG | 0.481649 | 4.1:-20161288 | None:intergenic |
| ATTGTTACTCTTAGATGGGC+AGG | 0.482284 | 4.1:+20161756 | MS.gene028492:CDS |
| ACCTGAGATGATAATTGAGC+AGG | 0.486485 | 4.1:+20163911 | MS.gene028492:CDS |
| TCCGGTAATGCGTCGAGGCC+CGG | 0.486956 | 4.1:+20162832 | MS.gene028492:CDS |
| TGCTCTTGATCTGCACGAGC+AGG | 0.491928 | 4.1:+20164535 | MS.gene028492:CDS |
| ATATTGATGATTCCAATATG+AGG | 0.497535 | 4.1:+20164875 | MS.gene028492:CDS |
| ACAGAAGCGGTAATGGGTTG+AGG | 0.500608 | 4.1:-20161282 | None:intergenic |
| TTGCACCAATTCCACAATGC+TGG | 0.502619 | 4.1:-20162802 | None:intergenic |
| CATAGAGTTCTTGGACCAGC+CGG | 0.503346 | 4.1:-20162851 | None:intergenic |
| CTGAGAGATCTCGGCAAAGC+AGG | 0.503407 | 4.1:+20163185 | MS.gene028492:CDS |
| TTCGGTGCAGCAAAACTGTC+GGG | 0.506228 | 4.1:+20161810 | MS.gene028492:CDS |
| TGGACAGTTTGCATCATTGA+AGG | 0.506543 | 4.1:+20162586 | MS.gene028492:CDS |
| GCTCTTTACGGCAAGTGTAC+CGG | 0.507579 | 4.1:-20162040 | None:intergenic |
| AACATAAACCTCGCCTTCAA+AGG | 0.517160 | 4.1:-20161337 | None:intergenic |
| CACCATTTCCTTTGAAGGCG+AGG | 0.528900 | 4.1:+20161329 | MS.gene028492:CDS |
| CTGTATTGTTACTCTTAGAT+GGG | 0.529102 | 4.1:+20161752 | MS.gene028492:CDS |
| ACCTGATCATCAAAACCTAA+AGG | 0.529543 | 4.1:-20164763 | None:intergenic |
| TGAAACAAAGCCTTTGCCAA+TGG | 0.534379 | 4.1:+20163875 | MS.gene028492:CDS |
| TTCGTCTGAGAATGGGTCAA+TGG | 0.534504 | 4.1:+20161212 | MS.gene028492:CDS |
| AGCATTATTCTCCACTTGGA+TGG | 0.538269 | 4.1:-20164516 | None:intergenic |
| AAAGCTTTGAATTACGGAAA+GGG | 0.538823 | 4.1:-20161950 | None:intergenic |
| GAGTACTGATGCTAGAATCC+TGG | 0.538984 | 4.1:-20162634 | None:intergenic |
| GGTGACTGTCTGCAATCCAT+TGG | 0.545761 | 4.1:-20163891 | None:intergenic |
| GTAATGCGTCGAGGCCCGGC+TGG | 0.549081 | 4.1:+20162836 | MS.gene028492:CDS |
| AGCTACATTGGTACAGTGCA+TGG | 0.556675 | 4.1:-20161235 | None:intergenic |
| ATAGAGTTCTTGGACCAGCC+GGG | 0.560928 | 4.1:-20162850 | None:intergenic |
| AAGGGAACACTGAGAGATCT+CGG | 0.561679 | 4.1:+20163176 | MS.gene028492:intron |
| GAAAGCTTTGAATTACGGAA+AGG | 0.561743 | 4.1:-20161951 | None:intergenic |
| TTTCGGTGCAGCAAAACTGT+CGG | 0.562482 | 4.1:+20161809 | MS.gene028492:CDS |
| GTCAGAAACGGAAGCTACAT+TGG | 0.567531 | 4.1:-20161247 | None:intergenic |
| GTAGCTTCCGTTTCTGACGA+AGG | 0.576494 | 4.1:+20161252 | MS.gene028492:CDS |
| ATTACAGGATAATATTATGG+AGG | 0.581083 | 4.1:+20164705 | MS.gene028492:intron |
| ACTCACGTGGATTCTGGGAA+AGG | 0.583135 | 4.1:-20162656 | None:intergenic |
| CTGCACCGAAAAGTCAGAAG+TGG | 0.584625 | 4.1:-20161797 | None:intergenic |
| AGAACTCTATGCAATGCTTG+CGG | 0.585395 | 4.1:+20162863 | MS.gene028492:CDS |
| ATGTGCTGCACAGGACAAGA+AGG | 0.588693 | 4.1:+20163702 | MS.gene028492:CDS |
| TGATAACTTGTCCATCCAAG+TGG | 0.607711 | 4.1:+20164505 | MS.gene028492:CDS |
| AGTTCACTAGCACGAGAGAG+TGG | 0.611323 | 4.1:-20161306 | None:intergenic |
| TGTCTGCAATCCATTGGCAA+AGG | 0.611932 | 4.1:-20163885 | None:intergenic |
| GAACGTAGATGCCAGCATTG+TGG | 0.619610 | 4.1:+20162791 | MS.gene028492:CDS |
| CAATGCTTGCGGGCTCATGT+GGG | 0.620002 | 4.1:+20162874 | MS.gene028492:CDS |
| GCAAAGGCTTTGTTTCATGG+GGG | 0.623713 | 4.1:-20163869 | None:intergenic |
| ATTCATCTAATAGGATGCAA+CGG | 0.631265 | 4.1:+20162558 | MS.gene028492:intron |
| ACGAGAGAGTGGAACAGAAG+CGG | 0.632477 | 4.1:-20161295 | None:intergenic |
| GAGATCTCGGCAAAGCAGGA+AGG | 0.645047 | 4.1:+20163189 | MS.gene028492:CDS |
| AATTGGTGCAAAGTCTACTC+CGG | 0.650622 | 4.1:+20162814 | MS.gene028492:CDS |
| TGCACCGAAAAGTCAGAAGT+GGG | 0.670616 | 4.1:-20161796 | None:intergenic |
| ATTACAGTATATGCTCGAAG+CGG | 0.696255 | 4.1:+20164469 | MS.gene028492:intron |
| TCTACTCCGGTAATGCGTCG+AGG | 0.701439 | 4.1:+20162827 | MS.gene028492:CDS |
| GCCGTAAAGAGCTTGCTGAG+AGG | 0.703271 | 4.1:+20162051 | MS.gene028492:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAAAGGAAAAAAAAAAA+AGG | - | chr4.1:20162231-20162250 | None:intergenic | 10.0% |
| !!! | ATAGTATTACTTTTATTTTT+AGG | + | chr4.1:20163654-20163673 | MS.gene028492:intron | 10.0% |
| !!! | CAAAATTTTCAAAATTTATT+TGG | - | chr4.1:20161480-20161499 | None:intergenic | 10.0% |
| !!! | TCTTCTTTTATATTATAAAT+TGG | + | chr4.1:20162151-20162170 | MS.gene028492:intron | 10.0% |
| !!! | TTTTTTCCTTTTAAATTATT+TGG | + | chr4.1:20162236-20162255 | MS.gene028492:intron | 10.0% |
| !! | ATGAAATTAATTCATCTAAT+AGG | + | chr4.1:20162549-20162568 | MS.gene028492:intron | 15.0% |
| !! | TGAATAACATATTATATTCT+TGG | - | chr4.1:20163297-20163316 | None:intergenic | 15.0% |
| !! | TTTAAGCCAAATAATTTAAA+AGG | - | chr4.1:20162245-20162264 | None:intergenic | 15.0% |
| !!! | TTTTATATTATAAATTGGTC+TGG | + | chr4.1:20162156-20162175 | MS.gene028492:intron | 15.0% |
| !!! | TTTTGATCATGTTTATTATT+TGG | + | chr4.1:20161645-20161664 | MS.gene028492:intron | 15.0% |
| !! | AAAATTTATGATGTTTACCA+GGG | + | chr4.1:20161918-20161937 | MS.gene028492:intron | 20.0% |
| !! | AAAGAAATCATACAAAAATG+AGG | - | chr4.1:20163003-20163022 | None:intergenic | 20.0% |
| !! | ACAAAGTAAATGATAGATAA+AGG | - | chr4.1:20164814-20164833 | None:intergenic | 20.0% |
| !! | ATAAGACTGATAAAAGATAA+AGG | - | chr4.1:20163828-20163847 | None:intergenic | 20.0% |
| !! | ATAATTAAGTTTGATATGTC+AGG | - | chr4.1:20164176-20164195 | None:intergenic | 20.0% |
| !! | ATATTACAAATAACCAAGAT+AGG | - | chr4.1:20162393-20162412 | None:intergenic | 20.0% |
| !! | ATGTTCGGATAAAAAAATTT+AGG | - | chr4.1:20164411-20164430 | None:intergenic | 20.0% |
| !! | CAATAAAATGACATTATGTT+CGG | - | chr4.1:20164426-20164445 | None:intergenic | 20.0% |
| !! | CATTTGTTTGAAAGTTAAAA+TGG | + | chr4.1:20162692-20162711 | MS.gene028492:intron | 20.0% |
| !! | TAAAATTTATGATGTTTACC+AGG | + | chr4.1:20161917-20161936 | MS.gene028492:intron | 20.0% |
| !! | TAAGACTGATAAAAGATAAA+GGG | - | chr4.1:20163827-20163846 | None:intergenic | 20.0% |
| !! | TAATTAAGTTTGATATGTCA+GGG | - | chr4.1:20164175-20164194 | None:intergenic | 20.0% |
| !! | TAGAAAATGTAATTACTACA+TGG | - | chr4.1:20164139-20164158 | None:intergenic | 20.0% |
| !! | TATTTATTTGTTTGTATTCG+TGG | + | chr4.1:20163941-20163960 | MS.gene028492:intron | 20.0% |
| !! | TTTCAAAATAACTCTTCATT+CGG | + | chr4.1:20161849-20161868 | MS.gene028492:intron | 20.0% |
| !! | TTTCAAAATTTATTTGGCTA+TGG | - | chr4.1:20161474-20161493 | None:intergenic | 20.0% |
| !!! | CATGTTTATTATTTGGATTT+TGG | + | chr4.1:20161652-20161671 | MS.gene028492:intron | 20.0% |
| !!! | TAATAGTTTTGTCAAGTTTT+TGG | + | chr4.1:20164331-20164350 | MS.gene028492:intron | 20.0% |
| !!! | TGTAGTAATTACATTTTCTA+TGG | + | chr4.1:20164139-20164158 | MS.gene028492:intron | 20.0% |
| !!! | TGTCATTTTATTGAACATTT+TGG | + | chr4.1:20164433-20164452 | MS.gene028492:intron | 20.0% |
| !!! | TTACCTTTTAGTCTTAATAT+TGG | + | chr4.1:20162723-20162742 | MS.gene028492:intron | 20.0% |
| ! | AAAAAACTTCAATTGAACGA+TGG | - | chr4.1:20161418-20161437 | None:intergenic | 25.0% |
| ! | AAAAACTTCAATTGAACGAT+GGG | - | chr4.1:20161417-20161436 | None:intergenic | 25.0% |
| ! | AAATTTATGATGTTTACCAG+GGG | + | chr4.1:20161919-20161938 | MS.gene028492:intron | 25.0% |
| ! | AACTATTATCATTATCCACA+TGG | - | chr4.1:20164319-20164338 | None:intergenic | 25.0% |
| ! | ACTATTATCATTATCCACAT+GGG | - | chr4.1:20164318-20164337 | None:intergenic | 25.0% |
| ! | ACTCTATGCAATAAAGTTTA+AGG | + | chr4.1:20161521-20161540 | MS.gene028492:intron | 25.0% |
| ! | AGGATTACAGGATAATATTA+TGG | + | chr4.1:20164702-20164721 | MS.gene028492:intron | 25.0% |
| ! | ATTACAGGATAATATTATGG+AGG | + | chr4.1:20164705-20164724 | MS.gene028492:intron | 25.0% |
| ! | CAATTCATTGAATAGATAGA+TGG | + | chr4.1:20164060-20164079 | MS.gene028492:intron | 25.0% |
| ! | TGGATTAAGTTTCAAATAGT+GGG | + | chr4.1:20161545-20161564 | MS.gene028492:intron | 25.0% |
| ! | TGTGAAACAACAATATCAAT+AGG | - | chr4.1:20162128-20162147 | None:intergenic | 25.0% |
| ! | TTGGATTAAGTTTCAAATAG+TGG | + | chr4.1:20161544-20161563 | MS.gene028492:intron | 25.0% |
| !! | AAATGGAAGCATATTTAAAG+AGG | - | chr4.1:20162357-20162376 | None:intergenic | 25.0% |
| !! | AATGGAAGCATATTTAAAGA+GGG | - | chr4.1:20162356-20162375 | None:intergenic | 25.0% |
| !! | ACCATTCTTGTGATTTTTAA+AGG | + | chr4.1:20161685-20161704 | MS.gene028492:intron | 25.0% |
| !! | ATATTGATGATTCCAATATG+AGG | + | chr4.1:20164875-20164894 | MS.gene028492:CDS | 25.0% |
| !! | ATTCTTGGTTACTTTATAAC+AGG | - | chr4.1:20163282-20163301 | None:intergenic | 25.0% |
| !! | CAACAAAAGTCATTAATTTG+CGG | - | chr4.1:20163747-20163766 | None:intergenic | 25.0% |
| !! | CTTATGAGCTAATTTAAGAT+TGG | + | chr4.1:20162270-20162289 | MS.gene028492:intron | 25.0% |
| !! | GAAATTTGATGATATTACAG+AGG | - | chr4.1:20163070-20163089 | None:intergenic | 25.0% |
| !! | GTAAAAAAATGAACCTTTTC+TGG | - | chr4.1:20161378-20161397 | None:intergenic | 25.0% |
| !! | TATGCAATAAAGTTTAAGGT+TGG | + | chr4.1:20161525-20161544 | MS.gene028492:intron | 25.0% |
| !! | TATTGAACATTTTGGATCTT+CGG | + | chr4.1:20164441-20164460 | MS.gene028492:intron | 25.0% |
| !! | TCCTTTAAAAATCACAAGAA+TGG | - | chr4.1:20161689-20161708 | None:intergenic | 25.0% |
| !! | TTATTGAGAATGCAAGTTTT+TGG | + | chr4.1:20164255-20164274 | MS.gene028492:intron | 25.0% |
| !! | TTCATTTTGCATATTTTCAC+TGG | + | chr4.1:20163244-20163263 | MS.gene028492:intron | 25.0% |
| !!! | GACAAATCTACAATTTTTTC+GGG | - | chr4.1:20162209-20162228 | None:intergenic | 25.0% |
| !!! | GCGTGCATAATTTTTTAATT+TGG | + | chr4.1:20164353-20164372 | MS.gene028492:intron | 25.0% |
| !!! | GGACAAATCTACAATTTTTT+CGG | - | chr4.1:20162210-20162229 | None:intergenic | 25.0% |
| !!! | TAATTTGCATTGGATTTTGA+GGG | - | chr4.1:20163546-20163565 | None:intergenic | 25.0% |
| !!! | TAGGCTTTATTCAACTTAAA+TGG | - | chr4.1:20162374-20162393 | None:intergenic | 25.0% |
| !!! | TCTTAATATTGGTGCTAATA+CGG | + | chr4.1:20162734-20162753 | MS.gene028492:intron | 25.0% |
| AAAACTTCAATTGAACGATG+GGG | - | chr4.1:20161416-20161435 | None:intergenic | 30.0% | |
| AAGTTGAATAAAGCCTATCT+TGG | + | chr4.1:20162377-20162396 | MS.gene028492:intron | 30.0% | |
| ACCAATGTCACAAGAAAATA+AGG | - | chr4.1:20163799-20163818 | None:intergenic | 30.0% | |
| ATTCATCTAATAGGATGCAA+CGG | + | chr4.1:20162558-20162577 | MS.gene028492:intron | 30.0% | |
| ATTCCAATATGAGGATTTAC+TGG | + | chr4.1:20164884-20164903 | MS.gene028492:CDS | 30.0% | |
| CTATTATCATTATCCACATG+GGG | - | chr4.1:20164317-20164336 | None:intergenic | 30.0% | |
| CTGTATTGTTACTCTTAGAT+GGG | + | chr4.1:20161752-20161771 | MS.gene028492:CDS | 30.0% | |
| GCACCAATATTAAGACTAAA+AGG | - | chr4.1:20162729-20162748 | None:intergenic | 30.0% | |
| GCATTCTCAATAACATGAAT+TGG | - | chr4.1:20164248-20164267 | None:intergenic | 30.0% | |
| TATGTTATTCATTCCGCATT+CGG | + | chr4.1:20163306-20163325 | MS.gene028492:intron | 30.0% | |
| TGAAAACAGTTCGAGTATTA+GGG | + | chr4.1:20164647-20164666 | MS.gene028492:intron | 30.0% | |
| ! | AAAGAAACTAAATTAGCCTG+AGG | + | chr4.1:20163989-20164008 | MS.gene028492:intron | 30.0% |
| ! | ACTGAATTTGAGATTCCTTT+AGG | + | chr4.1:20164748-20164767 | MS.gene028492:CDS | 30.0% |
| ! | GATTACACTCTAATTTGCAT+TGG | - | chr4.1:20163556-20163575 | None:intergenic | 30.0% |
| ! | TCTGGTATGTTATACTTTTG+AGG | + | chr4.1:20164682-20164701 | MS.gene028492:intron | 30.0% |
| ! | TCTTTATGTTAGCTTAGCAT+AGG | + | chr4.1:20162915-20162934 | MS.gene028492:intron | 30.0% |
| ! | TTTAAGATTGGACAAGTAGT+TGG | + | chr4.1:20162282-20162301 | MS.gene028492:intron | 30.0% |
| !! | AAAGCTTTGAATTACGGAAA+GGG | - | chr4.1:20161953-20161972 | None:intergenic | 30.0% |
| !! | ATATAACTTTGAAACTCACG+TGG | - | chr4.1:20162672-20162691 | None:intergenic | 30.0% |
| !! | CTAATTTGCATTGGATTTTG+AGG | - | chr4.1:20163547-20163566 | None:intergenic | 30.0% |
| !! | CTATTTGCTACCTTTTTGTT+TGG | + | chr4.1:20163512-20163531 | MS.gene028492:intron | 30.0% |
| !! | GTTATACTTTTGAGGATTAC+AGG | + | chr4.1:20164690-20164709 | MS.gene028492:intron | 30.0% |
| !! | TCTTATGTGTTTTTATCCTC+AGG | + | chr4.1:20163842-20163861 | MS.gene028492:intron | 30.0% |
| !!! | ACCTTATTTTCTTGTGACAT+TGG | + | chr4.1:20163795-20163814 | MS.gene028492:intron | 30.0% |
| !!! | GATGTTTTGAGAAGAAAATC+CGG | + | chr4.1:20162021-20162040 | MS.gene028492:CDS | 30.0% |
| AAACTTCAATTGAACGATGG+GGG | - | chr4.1:20161415-20161434 | None:intergenic | 35.0% | |
| ACATCCAGGTTACATGAAAA+CGG | - | chr4.1:20163380-20163399 | None:intergenic | 35.0% | |
| ACCTGATCATCAAAACCTAA+AGG | - | chr4.1:20164766-20164785 | None:intergenic | 35.0% | |
| ACCTGCATTTCATTACAAAG+GGG | - | chr4.1:20161727-20161746 | None:intergenic | 35.0% | |
| ATTACAGTATATGCTCGAAG+CGG | + | chr4.1:20164469-20164488 | MS.gene028492:intron | 35.0% | |
| ATTAGAGTGTAATCCGTTAG+TGG | + | chr4.1:20163562-20163581 | MS.gene028492:intron | 35.0% | |
| CACCTGCATTTCATTACAAA+GGG | - | chr4.1:20161728-20161747 | None:intergenic | 35.0% | |
| CATCTACGTTCACTTAAGAA+TGG | - | chr4.1:20162782-20162801 | None:intergenic | 35.0% | |
| CATGATTTAACACCTAGTTC+TGG | - | chr4.1:20162980-20162999 | None:intergenic | 35.0% | |
| CTGAAAACAGTTCGAGTATT+AGG | + | chr4.1:20164646-20164665 | MS.gene028492:intron | 35.0% | |
| GCTGTATTGTTACTCTTAGA+TGG | + | chr4.1:20161751-20161770 | MS.gene028492:CDS | 35.0% | |
| GGCAAGTAATCCAAACAAAA+AGG | - | chr4.1:20163525-20163544 | None:intergenic | 35.0% | |
| TATTTACCAACTAGAACCCA+TGG | + | chr4.1:20163025-20163044 | MS.gene028492:intron | 35.0% | |
| TCAAGAAAGAAACCTCAAAC+TGG | - | chr4.1:20163591-20163610 | None:intergenic | 35.0% | |
| TCCGTAATTCAAAGCTTTCA+CGG | + | chr4.1:20161955-20161974 | MS.gene028492:CDS | 35.0% | |
| TTAAAGTGTAATGCCGAATG+CGG | - | chr4.1:20163322-20163341 | None:intergenic | 35.0% | |
| TTAGACACTAACATGTTCTG+CGG | + | chr4.1:20162496-20162515 | MS.gene028492:intron | 35.0% | |
| ! | ATGAATTGGTCTCAATTTGC+TGG | - | chr4.1:20164234-20164253 | None:intergenic | 35.0% |
| ! | ATGAGTTCTGACATACATAC+AGG | + | chr4.1:20164849-20164868 | MS.gene028492:intron | 35.0% |
| ! | ATTTGACTTATCTGCTCACA+TGG | + | chr4.1:20164025-20164044 | MS.gene028492:intron | 35.0% |
| ! | CATGAAATTCGAAGCATCTT+TGG | - | chr4.1:20163630-20163649 | None:intergenic | 35.0% |
| ! | GATGCAACACTAGAGAATTT+TGG | + | chr4.1:20163436-20163455 | MS.gene028492:intron | 35.0% |
| ! | TCTAGGGTTGTTATGATCTT+TGG | + | chr4.1:20162079-20162098 | MS.gene028492:intron | 35.0% |
| ! | TGCTTTTGAACAGAATGAAC+TGG | + | chr4.1:20163214-20163233 | MS.gene028492:CDS | 35.0% |
| ! | TTAGGGCATTATTTGAGATC+TGG | + | chr4.1:20164664-20164683 | MS.gene028492:intron | 35.0% |
| ! | TTTGACTTATCTGCTCACAT+GGG | + | chr4.1:20164026-20164045 | MS.gene028492:intron | 35.0% |
| ! | TTTTCATGTAACCTGGATGT+TGG | + | chr4.1:20163380-20163399 | MS.gene028492:intron | 35.0% |
| ! | TTTTTCACCTTCGTCAGAAA+CGG | - | chr4.1:20161262-20161281 | None:intergenic | 35.0% |
| !! | ACACTAGAGAATTTTGGCAT+AGG | + | chr4.1:20163442-20163461 | MS.gene028492:intron | 35.0% |
| !! | GAAAGCTTTGAATTACGGAA+AGG | - | chr4.1:20161954-20161973 | None:intergenic | 35.0% |
| !! | TCCGTGAAAGCTTTGAATTA+CGG | - | chr4.1:20161959-20161978 | None:intergenic | 35.0% |
| !! | TCCTTTAGGTTTTGATGATC+AGG | + | chr4.1:20164762-20164781 | MS.gene028492:CDS | 35.0% |
| !! | TTTCAAGTTGTCACATCACA+TGG | + | chr4.1:20163407-20163426 | MS.gene028492:intron | 35.0% |
| !!! | ATAGTGGGTTTTCTACAATG+TGG | + | chr4.1:20161560-20161579 | MS.gene028492:intron | 35.0% |
| AAAAGCTCCTGTTTAAGCCA+TGG | - | chr4.1:20163045-20163064 | None:intergenic | 40.0% | |
| AAAGCTCCTGTTTAAGCCAT+GGG | - | chr4.1:20163044-20163063 | None:intergenic | 40.0% | |
| AACATAAACCTCGCCTTCAA+AGG | - | chr4.1:20161340-20161359 | None:intergenic | 40.0% | |
| AAGATTTCCCAAGTCACTTC+AGG | - | chr4.1:20163107-20163126 | None:intergenic | 40.0% | |
| AAGCATCTTTGGTTGAGAAC+AGG | - | chr4.1:20163619-20163638 | None:intergenic | 40.0% | |
| AAGGCTAGCATTAGCAAGAT+TGG | - | chr4.1:20164795-20164814 | None:intergenic | 40.0% | |
| AATAGGATGCAACGGAAGAA+TGG | + | chr4.1:20162566-20162585 | MS.gene028492:intron | 40.0% | |
| AATTGGTGCAAAGTCTACTC+CGG | + | chr4.1:20162814-20162833 | MS.gene028492:CDS | 40.0% | |
| AATTTCCTCATGATAGCCTC+AGG | - | chr4.1:20164008-20164027 | None:intergenic | 40.0% | |
| ACCCCTTTGTAATGAAATGC+AGG | + | chr4.1:20161723-20161742 | MS.gene028492:intron | 40.0% | |
| ACCTGAGATGATAATTGAGC+AGG | + | chr4.1:20163911-20163930 | MS.gene028492:CDS | 40.0% | |
| ACCTGCTCAATTATCATCTC+AGG | - | chr4.1:20163915-20163934 | None:intergenic | 40.0% | |
| ACGTTCACTTAAGAATGGCA+GGG | - | chr4.1:20162777-20162796 | None:intergenic | 40.0% | |
| AGAAAATTCATGTGCTGCAC+AGG | + | chr4.1:20163693-20163712 | MS.gene028492:CDS | 40.0% | |
| AGAACTCTATGCAATGCTTG+CGG | + | chr4.1:20162863-20162882 | MS.gene028492:CDS | 40.0% | |
| AGAGGGGAAAGTCATGAAAA+GGG | + | chr4.1:20164611-20164630 | MS.gene028492:intron | 40.0% | |
| AGCATTATTCTCCACTTGGA+TGG | - | chr4.1:20164519-20164538 | None:intergenic | 40.0% | |
| AGGTTACATGAAAACGGAAC+TGG | - | chr4.1:20163374-20163393 | None:intergenic | 40.0% | |
| ATATTTAAAGAGGGAGGCAG+GGG | - | chr4.1:20162347-20162366 | None:intergenic | 40.0% | |
| ATGCTGAATTCGTCTGAGAA+TGG | + | chr4.1:20161204-20161223 | MS.gene028492:CDS | 40.0% | |
| ATTGTTACTCTTAGATGGGC+AGG | + | chr4.1:20161756-20161775 | MS.gene028492:CDS | 40.0% | |
| CAGCCAGTAAATCCTCATAT+TGG | - | chr4.1:20164890-20164909 | None:intergenic | 40.0% | |
| CATATTTAAAGAGGGAGGCA+GGG | - | chr4.1:20162348-20162367 | None:intergenic | 40.0% | |
| CATTACAAAGGGGTGATCAA+AGG | - | chr4.1:20161717-20161736 | None:intergenic | 40.0% | |
| CTAGCATTAGCAAGATTGGA+TGG | - | chr4.1:20164791-20164810 | None:intergenic | 40.0% | |
| CTCTTCATTCGGACATGTAT+TGG | + | chr4.1:20161860-20161879 | MS.gene028492:intron | 40.0% | |
| CTTGAAAAGATCCAACATCC+AGG | - | chr4.1:20163394-20163413 | None:intergenic | 40.0% | |
| GAAAGTCATGAAAAGGGTTG+AGG | + | chr4.1:20164617-20164636 | MS.gene028492:intron | 40.0% | |
| GAACTCACCATTTCCTTTGA+AGG | + | chr4.1:20161324-20161343 | MS.gene028492:CDS | 40.0% | |
| GACTTCCTACTCTTCAAATG+AGG | + | chr4.1:20164578-20164597 | MS.gene028492:intron | 40.0% | |
| GCACCTGCATTTCATTACAA+AGG | - | chr4.1:20161729-20161748 | None:intergenic | 40.0% | |
| GCATGGTCTGTTGATATGAA+GGG | + | chr4.1:20163158-20163177 | MS.gene028492:intron | 40.0% | |
| GGATACCTCATTTGAAGAGT+AGG | - | chr4.1:20164586-20164605 | None:intergenic | 40.0% | |
| GGTTACATGAAAACGGAACT+GGG | - | chr4.1:20163373-20163392 | None:intergenic | 40.0% | |
| TACGTTCACTTAAGAATGGC+AGG | - | chr4.1:20162778-20162797 | None:intergenic | 40.0% | |
| TGAAACAAAGCCTTTGCCAA+TGG | + | chr4.1:20163875-20163894 | MS.gene028492:CDS | 40.0% | |
| TGCACGACATTAGAATATGC+TGG | + | chr4.1:20162444-20162463 | MS.gene028492:intron | 40.0% | |
| TGCTGAATTCGTCTGAGAAT+GGG | + | chr4.1:20161205-20161224 | MS.gene028492:CDS | 40.0% | |
| TGGACAGTTTGCATCATTGA+AGG | + | chr4.1:20162586-20162605 | MS.gene028492:CDS | 40.0% | |
| TTGAAACTCACGTGGATTCT+GGG | - | chr4.1:20162664-20162683 | None:intergenic | 40.0% | |
| TTGTAATGAAATGCAGGTGC+AGG | + | chr4.1:20161729-20161748 | MS.gene028492:intron | 40.0% | |
| ! | AAATGAGGTATCCTTCTGAG+AGG | + | chr4.1:20164593-20164612 | MS.gene028492:intron | 40.0% |
| ! | AATGAGGTATCCTTCTGAGA+GGG | + | chr4.1:20164594-20164613 | MS.gene028492:intron | 40.0% |
| ! | AGGATTTTGCTGATGCATCT+GGG | + | chr4.1:20164725-20164744 | MS.gene028492:CDS | 40.0% |
| ! | AGTTCCGTTTTCATGTAACC+TGG | + | chr4.1:20163373-20163392 | MS.gene028492:intron | 40.0% |
| ! | CAAGCATTGCATAGAGTTCT+TGG | - | chr4.1:20162863-20162882 | None:intergenic | 40.0% |
| ! | GGAAGCATATTTAAAGAGGG+AGG | - | chr4.1:20162353-20162372 | None:intergenic | 40.0% |
| ! | TGATAACTTGTCCATCCAAG+TGG | + | chr4.1:20164505-20164524 | MS.gene028492:CDS | 40.0% |
| ! | TGTGCAGCACATGAATTTTC+TGG | - | chr4.1:20163694-20163713 | None:intergenic | 40.0% |
| ! | TTATGATCTTTGGTGCAGTC+TGG | + | chr4.1:20162089-20162108 | MS.gene028492:intron | 40.0% |
| ! | TTTAAGCCATGGGTTCTAGT+TGG | - | chr4.1:20163034-20163053 | None:intergenic | 40.0% |
| ! | TTTGAAACTCACGTGGATTC+TGG | - | chr4.1:20162665-20162684 | None:intergenic | 40.0% |
| !! | AATTGGTCTCAATTTGCTGG+AGG | - | chr4.1:20164231-20164250 | None:intergenic | 40.0% |
| !! | ATGAACCTTTTCTGGCGTAA+CGG | - | chr4.1:20161370-20161389 | None:intergenic | 40.0% |
| !! | ATTGGTCTCAATTTGCTGGA+GGG | - | chr4.1:20164230-20164249 | None:intergenic | 40.0% |
| !! | CAAGAGCATTATTCTCCACT+TGG | - | chr4.1:20164523-20164542 | None:intergenic | 40.0% |
| !! | TGGCAAAGGCTTTGTTTCAT+GGG | - | chr4.1:20163874-20163893 | None:intergenic | 40.0% |
| !! | TTGGCAAAGGCTTTGTTTCA+TGG | - | chr4.1:20163875-20163894 | None:intergenic | 40.0% |
| AACCTCGCCTTCAAAGGAAA+TGG | - | chr4.1:20161334-20161353 | None:intergenic | 45.0% | |
| AAGGGAACACTGAGAGATCT+CGG | + | chr4.1:20163176-20163195 | MS.gene028492:intron | 45.0% | |
| AAGTTCTGCACTCCAGAACT+AGG | + | chr4.1:20162965-20162984 | MS.gene028492:intron | 45.0% | |
| ACCTCTCAGCAAGCTCTTTA+CGG | - | chr4.1:20162055-20162074 | None:intergenic | 45.0% | |
| AGATGCCAGCATTGTGGAAT+TGG | + | chr4.1:20162797-20162816 | MS.gene028492:CDS | 45.0% | |
| AGCAAAACTGTCGGGACATT+TGG | + | chr4.1:20161818-20161837 | MS.gene028492:CDS | 45.0% | |
| AGCTACATTGGTACAGTGCA+TGG | - | chr4.1:20161238-20161257 | None:intergenic | 45.0% | |
| AGTGGAACAGAAGCGGTAAT+GGG | - | chr4.1:20161291-20161310 | None:intergenic | 45.0% | |
| ATTACTGACCTACGTTCGCA+TGG | + | chr4.1:20163141-20163160 | MS.gene028492:intron | 45.0% | |
| CAAGTCACTTCAGGCAAGAT+GGG | - | chr4.1:20163098-20163117 | None:intergenic | 45.0% | |
| CATCTTGCCTGAAGTGACTT+GGG | + | chr4.1:20163097-20163116 | MS.gene028492:intron | 45.0% | |
| CGCATGGTCTGTTGATATGA+AGG | + | chr4.1:20163157-20163176 | MS.gene028492:intron | 45.0% | |
| CTAGAACCCATGGCTTAAAC+AGG | + | chr4.1:20163035-20163054 | MS.gene028492:intron | 45.0% | |
| GAACTCTATGCAATGCTTGC+GGG | + | chr4.1:20162864-20162883 | MS.gene028492:CDS | 45.0% | |
| GAGAGGGGAAAGTCATGAAA+AGG | + | chr4.1:20164610-20164629 | MS.gene028492:intron | 45.0% | |
| GCAAAACTGTCGGGACATTT+GGG | + | chr4.1:20161819-20161838 | MS.gene028492:CDS | 45.0% | |
| GCATATTTAAAGAGGGAGGC+AGG | - | chr4.1:20162349-20162368 | None:intergenic | 45.0% | |
| GGAGATCTGCATCACTTGTT+AGG | + | chr4.1:20161976-20161995 | MS.gene028492:CDS | 45.0% | |
| GTCAGAAACGGAAGCTACAT+TGG | - | chr4.1:20161250-20161269 | None:intergenic | 45.0% | |
| TATTTAAAGAGGGAGGCAGG+GGG | - | chr4.1:20162346-20162365 | None:intergenic | 45.0% | |
| TGCACCGAAAAGTCAGAAGT+GGG | - | chr4.1:20161799-20161818 | None:intergenic | 45.0% | |
| TGCGAACGTAGGTCAGTAAT+TGG | - | chr4.1:20163141-20163160 | None:intergenic | 45.0% | |
| TGTCTGCAATCCATTGGCAA+AGG | - | chr4.1:20163888-20163907 | None:intergenic | 45.0% | |
| TTAGTGTCTTTAGCCCCATG+TGG | + | chr4.1:20164301-20164320 | MS.gene028492:intron | 45.0% | |
| TTCGTCTGAGAATGGGTCAA+TGG | + | chr4.1:20161212-20161231 | MS.gene028492:CDS | 45.0% | |
| TTGCACCAATTCCACAATGC+TGG | - | chr4.1:20162805-20162824 | None:intergenic | 45.0% | |
| TTGCTGAGAGGTAGAGTCTA+GGG | + | chr4.1:20162063-20162082 | MS.gene028492:intron | 45.0% | |
| ! | ATGAGGTATCCTTCTGAGAG+GGG | + | chr4.1:20164595-20164614 | MS.gene028492:intron | 45.0% |
| ! | ATTAGCCTGAGGCTATCATG+AGG | + | chr4.1:20164000-20164019 | MS.gene028492:intron | 45.0% |
| ! | CGTACCCACTTCTGACTTTT+CGG | + | chr4.1:20161792-20161811 | MS.gene028492:CDS | 45.0% |
| ! | GAGGATTTTGCTGATGCATC+TGG | + | chr4.1:20164724-20164743 | MS.gene028492:CDS | 45.0% |
| ! | TTTCGGTGCAGCAAAACTGT+CGG | + | chr4.1:20161809-20161828 | MS.gene028492:CDS | 45.0% |
| !! | CTAGAATCCTGGTTTTCAGC+AGG | - | chr4.1:20162626-20162645 | None:intergenic | 45.0% |
| !! | GAGTACTGATGCTAGAATCC+TGG | - | chr4.1:20162637-20162656 | None:intergenic | 45.0% |
| !! | GCAAAGGCTTTGTTTCATGG+GGG | - | chr4.1:20163872-20163891 | None:intergenic | 45.0% |
| !! | GGCAAAGGCTTTGTTTCATG+GGG | - | chr4.1:20163873-20163892 | None:intergenic | 45.0% |
| ACGAGAGAGTGGAACAGAAG+CGG | - | chr4.1:20161298-20161317 | None:intergenic | 50.0% | |
| AGTTCACTAGCACGAGAGAG+TGG | - | chr4.1:20161309-20161328 | None:intergenic | 50.0% | |
| ATAGAGTTCTTGGACCAGCC+GGG | - | chr4.1:20162853-20162872 | None:intergenic | 50.0% | |
| ATGTGCTGCACAGGACAAGA+AGG | + | chr4.1:20163702-20163721 | MS.gene028492:CDS | 50.0% | |
| CAAGCTTTCACGTGAAGACG+TGG | - | chr4.1:20162320-20162339 | None:intergenic | 50.0% | |
| CAGTTCTCCTGCTGAAAACC+AGG | + | chr4.1:20162616-20162635 | MS.gene028492:CDS | 50.0% | |
| CATAGAGTTCTTGGACCAGC+CGG | - | chr4.1:20162854-20162873 | None:intergenic | 50.0% | |
| CATGACTTTCCCCTCTCAGA+AGG | - | chr4.1:20164607-20164626 | None:intergenic | 50.0% | |
| CCAAGTCACTTCAGGCAAGA+TGG | - | chr4.1:20163099-20163118 | None:intergenic | 50.0% | |
| CCATCTTGCCTGAAGTGACT+TGG | + | chr4.1:20163096-20163115 | MS.gene028492:intron | 50.0% | |
| CTCAAACTGGCGACCACTAA+CGG | - | chr4.1:20163578-20163597 | None:intergenic | 50.0% | |
| CTGCACCGAAAAGTCAGAAG+TGG | - | chr4.1:20161800-20161819 | None:intergenic | 50.0% | |
| CTTGCTGAGAGGTAGAGTCT+AGG | + | chr4.1:20162062-20162081 | MS.gene028492:intron | 50.0% | |
| GAACGTAGATGCCAGCATTG+TGG | + | chr4.1:20162791-20162810 | MS.gene028492:CDS | 50.0% | |
| GAGTGGAACAGAAGCGGTAA+TGG | - | chr4.1:20161292-20161311 | None:intergenic | 50.0% | |
| GCTCTTTACGGCAAGTGTAC+CGG | - | chr4.1:20162043-20162062 | None:intergenic | 50.0% | |
| GGTGACTGTCTGCAATCCAT+TGG | - | chr4.1:20163894-20163913 | None:intergenic | 50.0% | |
| GTAGCTTCCGTTTCTGACGA+AGG | + | chr4.1:20161252-20161271 | MS.gene028492:CDS | 50.0% | |
| TCAACAGACCATGCGAACGT+AGG | - | chr4.1:20163152-20163171 | None:intergenic | 50.0% | |
| TCTGCGGATCTTCTCGACTT+TGG | + | chr4.1:20162512-20162531 | MS.gene028492:intron | 50.0% | |
| ! | ACTCACGTGGATTCTGGGAA+AGG | - | chr4.1:20162659-20162678 | None:intergenic | 50.0% |
| ! | CACCATTTCCTTTGAAGGCG+AGG | + | chr4.1:20161329-20161348 | MS.gene028492:CDS | 50.0% |
| ! | TTCGGTGCAGCAAAACTGTC+GGG | + | chr4.1:20161810-20161829 | MS.gene028492:CDS | 50.0% |
| !! | ACAGAAGCGGTAATGGGTTG+AGG | - | chr4.1:20161285-20161304 | None:intergenic | 50.0% |
| !! | ACCTTTTCTGGCGTAACGGA+AGG | - | chr4.1:20161366-20161385 | None:intergenic | 50.0% |
| !! | CCTTTTCTGGCGTAACGGAA+GGG | - | chr4.1:20161365-20161384 | None:intergenic | 50.0% |
| !!! | GGAAAGGGTCATTTTTCCCC+TGG | - | chr4.1:20161938-20161957 | None:intergenic | 50.0% |
| CAATGCTTGCGGGCTCATGT+GGG | + | chr4.1:20162874-20162893 | MS.gene028492:CDS | 55.0% | |
| CACGTGAAGACGTGGCACAA+AGG | - | chr4.1:20162312-20162331 | None:intergenic | 55.0% | |
| CCCTTCCGTTACGCCAGAAA+AGG | + | chr4.1:20161362-20161381 | MS.gene028492:CDS | 55.0% | |
| CGGGCTCATGTGGGCAAATA+AGG | + | chr4.1:20162883-20162902 | MS.gene028492:CDS | 55.0% | |
| CGTTAGTGGTCGCCAGTTTG+AGG | + | chr4.1:20163576-20163595 | MS.gene028492:intron | 55.0% | |
| CTGAGAGATCTCGGCAAAGC+AGG | + | chr4.1:20163185-20163204 | MS.gene028492:CDS | 55.0% | |
| GAGATCTCGGCAAAGCAGGA+AGG | + | chr4.1:20163189-20163208 | MS.gene028492:CDS | 55.0% | |
| GTTTCATGGGGGCTTTCCTG+AGG | - | chr4.1:20163861-20163880 | None:intergenic | 55.0% | |
| TCTACTCCGGTAATGCGTCG+AGG | + | chr4.1:20162827-20162846 | MS.gene028492:CDS | 55.0% | |
| TGCTCTTGATCTGCACGAGC+AGG | + | chr4.1:20164535-20164554 | MS.gene028492:CDS | 55.0% | |
| !! | GCCGTAAAGAGCTTGCTGAG+AGG | + | chr4.1:20162051-20162070 | MS.gene028492:CDS | 55.0% |
| GCAATGCTTGCGGGCTCATG+TGG | + | chr4.1:20162873-20162892 | MS.gene028492:CDS | 60.0% | |
| TTAAAGAGGGAGGCAGGGGG+AGG | - | chr4.1:20162343-20162362 | None:intergenic | 60.0% | |
| TCCGGTAATGCGTCGAGGCC+CGG | + | chr4.1:20162832-20162851 | MS.gene028492:CDS | 65.0% | |
| GCCGGGCCTCGACGCATTAC+CGG | - | chr4.1:20162836-20162855 | None:intergenic | 70.0% | |
| GTAATGCGTCGAGGCCCGGC+TGG | + | chr4.1:20162836-20162855 | MS.gene028492:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 20161198 | 20164912 | 20161198 | ID=MS.gene028492 |
| chr4.1 | mRNA | 20161198 | 20164912 | 20161198 | ID=MS.gene028492.t1;Parent=MS.gene028492 |
| chr4.1 | exon | 20161198 | 20161383 | 20161198 | ID=MS.gene028492.t1.exon1;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20161198 | 20161383 | 20161198 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20161745 | 20161840 | 20161745 | ID=MS.gene028492.t1.exon2;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20161745 | 20161840 | 20161745 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20161939 | 20162072 | 20161939 | ID=MS.gene028492.t1.exon3;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20161939 | 20162072 | 20161939 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20162571 | 20162672 | 20162571 | ID=MS.gene028492.t1.exon4;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20162571 | 20162672 | 20162571 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20162790 | 20162904 | 20162790 | ID=MS.gene028492.t1.exon5;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20162790 | 20162904 | 20162790 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20163179 | 20163235 | 20163179 | ID=MS.gene028492.t1.exon6;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20163179 | 20163235 | 20163179 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20163676 | 20163723 | 20163676 | ID=MS.gene028492.t1.exon7;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20163676 | 20163723 | 20163676 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20163864 | 20163932 | 20163864 | ID=MS.gene028492.t1.exon8;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20163864 | 20163932 | 20163864 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20164476 | 20164556 | 20164476 | ID=MS.gene028492.t1.exon9;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20164476 | 20164556 | 20164476 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20164712 | 20164783 | 20164712 | ID=MS.gene028492.t1.exon10;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20164712 | 20164783 | 20164712 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| chr4.1 | exon | 20164871 | 20164912 | 20164871 | ID=MS.gene028492.t1.exon11;Parent=MS.gene028492.t1 |
| chr4.1 | CDS | 20164871 | 20164912 | 20164871 | ID=cds.MS.gene028492.t1;Parent=MS.gene028492.t1 |
| Gene Sequence |
| Protein sequence |
