Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02861.t1 | XP_003594371.1 | 97.6 | 330 | 8 | 0 | 1 | 330 | 1 | 330 | 6.80E-151 | 543.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02861.t1 | Q9SJW0 | 62.5 | 309 | 84 | 8 | 31 | 330 | 1 | 286 | 5.2e-59 | 229.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02861.t1 | G7ISP0 | 97.6 | 330 | 8 | 0 | 1 | 330 | 1 | 330 | 4.9e-151 | 543.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene02861.t1 | TF | GARP-G2-like |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02861.t1 | MTR_2g027860 | 97.576 | 330 | 8 | 0 | 1 | 330 | 1 | 330 | 0.0 | 665 |
MS.gene02861.t1 | MTR_7g088070 | 73.050 | 141 | 37 | 1 | 49 | 188 | 50 | 190 | 9.82e-69 | 216 |
MS.gene02861.t1 | MTR_7g088070 | 72.857 | 140 | 35 | 1 | 49 | 188 | 50 | 186 | 6.21e-68 | 214 |
MS.gene02861.t1 | MTR_7g098250 | 60.390 | 154 | 52 | 3 | 33 | 186 | 252 | 396 | 8.92e-53 | 181 |
MS.gene02861.t1 | MTR_1g053835 | 48.087 | 183 | 77 | 3 | 35 | 217 | 244 | 408 | 2.55e-51 | 176 |
MS.gene02861.t1 | MTR_1g080330 | 53.216 | 171 | 73 | 3 | 33 | 200 | 156 | 322 | 1.86e-48 | 167 |
MS.gene02861.t1 | MTR_7g093030 | 51.351 | 148 | 69 | 2 | 46 | 193 | 209 | 353 | 4.39e-47 | 163 |
MS.gene02861.t1 | MTR_7g115530 | 53.333 | 150 | 68 | 1 | 48 | 197 | 217 | 364 | 1.80e-46 | 163 |
MS.gene02861.t1 | MTR_5g027440 | 52.448 | 143 | 58 | 1 | 49 | 181 | 25 | 167 | 5.06e-44 | 152 |
MS.gene02861.t1 | MTR_6g444980 | 57.746 | 142 | 52 | 3 | 49 | 185 | 35 | 173 | 1.25e-43 | 154 |
MS.gene02861.t1 | MTR_4g081710 | 44.792 | 192 | 80 | 6 | 47 | 220 | 15 | 198 | 3.36e-43 | 152 |
MS.gene02861.t1 | MTR_6g444980 | 58.779 | 131 | 47 | 2 | 49 | 175 | 35 | 162 | 5.91e-42 | 149 |
MS.gene02861.t1 | MTR_5g041350 | 44.262 | 183 | 87 | 5 | 47 | 217 | 13 | 192 | 8.36e-41 | 146 |
MS.gene02861.t1 | MTR_2g086450 | 49.682 | 157 | 61 | 3 | 47 | 185 | 43 | 199 | 1.31e-40 | 146 |
MS.gene02861.t1 | MTR_6g032990 | 48.701 | 154 | 63 | 2 | 47 | 185 | 40 | 192 | 1.61e-40 | 146 |
MS.gene02861.t1 | MTR_7g068600 | 47.771 | 157 | 74 | 5 | 49 | 200 | 13 | 166 | 2.74e-40 | 141 |
MS.gene02861.t1 | MTR_1g080330 | 58.140 | 129 | 49 | 2 | 33 | 158 | 156 | 282 | 1.10e-38 | 139 |
MS.gene02861.t1 | MTR_7g115530 | 59.459 | 111 | 43 | 1 | 48 | 158 | 217 | 325 | 1.22e-36 | 134 |
MS.gene02861.t1 | MTR_2g027800 | 47.826 | 138 | 56 | 2 | 49 | 173 | 39 | 173 | 3.32e-34 | 127 |
MS.gene02861.t1 | MTR_2g027800 | 48.855 | 131 | 57 | 2 | 49 | 176 | 39 | 162 | 4.55e-34 | 127 |
MS.gene02861.t1 | MTR_1g090670 | 47.059 | 136 | 63 | 2 | 49 | 176 | 44 | 178 | 9.69e-33 | 123 |
MS.gene02861.t1 | MTR_1g053800 | 46.043 | 139 | 66 | 2 | 49 | 184 | 177 | 309 | 1.25e-30 | 118 |
MS.gene02861.t1 | MTR_7g115530 | 62.857 | 70 | 26 | 0 | 48 | 117 | 217 | 286 | 3.50e-24 | 100 |
MS.gene02861.t1 | MTR_7g093030 | 56.579 | 76 | 30 | 2 | 46 | 121 | 209 | 281 | 1.05e-23 | 99.0 |
MS.gene02861.t1 | MTR_7g115530 | 69.355 | 62 | 19 | 0 | 48 | 109 | 217 | 278 | 2.62e-23 | 99.0 |
MS.gene02861.t1 | MTR_1g053830 | 45.783 | 83 | 45 | 0 | 35 | 117 | 4 | 86 | 8.85e-23 | 91.3 |
MS.gene02861.t1 | MTR_7g093010 | 37.222 | 180 | 94 | 5 | 13 | 180 | 171 | 343 | 1.08e-21 | 94.7 |
MS.gene02861.t1 | MTR_7g115530 | 71.698 | 53 | 15 | 0 | 48 | 100 | 217 | 269 | 1.79e-19 | 87.0 |
MS.gene02861.t1 | MTR_7g115530 | 71.154 | 52 | 15 | 0 | 48 | 99 | 217 | 268 | 1.21e-18 | 85.1 |
MS.gene02861.t1 | MTR_2g023580 | 69.091 | 55 | 17 | 0 | 51 | 105 | 57 | 111 | 7.03e-17 | 79.0 |
MS.gene02861.t1 | MTR_7g069660 | 61.404 | 57 | 22 | 0 | 51 | 107 | 73 | 129 | 1.99e-16 | 79.3 |
MS.gene02861.t1 | MTR_8g066310 | 46.535 | 101 | 44 | 3 | 51 | 151 | 175 | 265 | 3.70e-16 | 78.6 |
MS.gene02861.t1 | MTR_6g071625 | 60.000 | 65 | 24 | 1 | 51 | 113 | 204 | 268 | 3.72e-16 | 79.0 |
MS.gene02861.t1 | MTR_3g450310 | 48.718 | 78 | 24 | 1 | 51 | 112 | 21 | 98 | 1.06e-15 | 75.1 |
MS.gene02861.t1 | MTR_1g093080 | 56.061 | 66 | 29 | 0 | 49 | 114 | 211 | 276 | 1.98e-15 | 76.6 |
MS.gene02861.t1 | MTR_5g029470 | 63.636 | 55 | 20 | 0 | 51 | 105 | 221 | 275 | 3.11e-15 | 76.3 |
MS.gene02861.t1 | MTR_8g086410 | 63.636 | 55 | 20 | 0 | 51 | 105 | 113 | 167 | 3.28e-15 | 76.3 |
MS.gene02861.t1 | MTR_8g086410 | 63.636 | 55 | 20 | 0 | 51 | 105 | 111 | 165 | 3.35e-15 | 76.3 |
MS.gene02861.t1 | MTR_0223s0040 | 53.425 | 73 | 33 | 1 | 51 | 123 | 20 | 91 | 4.26e-15 | 74.7 |
MS.gene02861.t1 | MTR_3g064840 | 63.636 | 55 | 20 | 0 | 51 | 105 | 276 | 330 | 4.51e-15 | 76.3 |
MS.gene02861.t1 | MTR_2g016220 | 65.455 | 55 | 19 | 0 | 51 | 105 | 91 | 145 | 4.67e-15 | 75.5 |
MS.gene02861.t1 | MTR_2g016220 | 65.455 | 55 | 19 | 0 | 51 | 105 | 91 | 145 | 5.57e-15 | 75.5 |
MS.gene02861.t1 | MTR_2g084230 | 65.455 | 55 | 19 | 0 | 51 | 105 | 99 | 153 | 6.05e-15 | 75.5 |
MS.gene02861.t1 | MTR_2g084230 | 65.455 | 55 | 19 | 0 | 51 | 105 | 99 | 153 | 7.83e-15 | 74.3 |
MS.gene02861.t1 | MTR_1g021520 | 61.818 | 55 | 21 | 0 | 51 | 105 | 128 | 182 | 8.35e-15 | 73.9 |
MS.gene02861.t1 | MTR_1g112370 | 65.385 | 52 | 18 | 0 | 51 | 102 | 24 | 75 | 9.32e-15 | 74.3 |
MS.gene02861.t1 | MTR_5g017980 | 55.714 | 70 | 30 | 1 | 49 | 117 | 193 | 262 | 4.28e-14 | 72.4 |
MS.gene02861.t1 | MTR_1g090670 | 39.423 | 104 | 54 | 2 | 81 | 176 | 1 | 103 | 6.04e-14 | 70.5 |
MS.gene02861.t1 | MTR_8g086410 | 61.538 | 52 | 20 | 0 | 51 | 102 | 113 | 164 | 1.26e-13 | 71.6 |
MS.gene02861.t1 | MTR_2g016220 | 67.347 | 49 | 16 | 0 | 51 | 99 | 91 | 139 | 2.07e-13 | 70.9 |
MS.gene02861.t1 | MTR_5g017980 | 55.714 | 70 | 29 | 2 | 49 | 117 | 192 | 260 | 5.75e-13 | 68.9 |
MS.gene02861.t1 | MTR_5g017980 | 55.714 | 70 | 29 | 2 | 49 | 117 | 193 | 261 | 5.96e-13 | 68.9 |
MS.gene02861.t1 | MTR_5g054300 | 58.182 | 55 | 23 | 0 | 49 | 103 | 198 | 252 | 6.68e-13 | 68.9 |
MS.gene02861.t1 | MTR_4g113140 | 48.718 | 78 | 39 | 1 | 39 | 115 | 224 | 301 | 7.99e-13 | 69.3 |
MS.gene02861.t1 | MTR_4g086835 | 60.000 | 55 | 22 | 0 | 49 | 103 | 274 | 328 | 1.55e-12 | 68.2 |
MS.gene02861.t1 | MTR_4g021790 | 56.364 | 55 | 23 | 1 | 49 | 103 | 168 | 221 | 2.71e-12 | 66.6 |
MS.gene02861.t1 | MTR_4g121020 | 60.000 | 55 | 21 | 1 | 49 | 103 | 215 | 268 | 4.46e-12 | 67.4 |
MS.gene02861.t1 | MTR_4g121020 | 60.000 | 55 | 21 | 1 | 49 | 103 | 215 | 268 | 4.58e-12 | 67.4 |
MS.gene02861.t1 | MTR_4g121020 | 60.000 | 55 | 21 | 1 | 49 | 103 | 111 | 164 | 4.66e-12 | 67.0 |
MS.gene02861.t1 | MTR_1g093080 | 60.784 | 51 | 20 | 0 | 49 | 99 | 211 | 261 | 5.61e-12 | 65.9 |
MS.gene02861.t1 | MTR_5g041350 | 44.048 | 84 | 42 | 3 | 136 | 217 | 1 | 81 | 8.65e-12 | 64.7 |
MS.gene02861.t1 | MTR_4g064730 | 48.611 | 72 | 35 | 2 | 49 | 119 | 131 | 201 | 1.00e-11 | 65.1 |
MS.gene02861.t1 | MTR_2g090675 | 50.820 | 61 | 29 | 1 | 42 | 102 | 154 | 213 | 1.15e-11 | 65.9 |
MS.gene02861.t1 | MTR_4g131600 | 53.333 | 60 | 26 | 2 | 49 | 107 | 201 | 259 | 1.16e-11 | 65.9 |
MS.gene02861.t1 | MTR_5g041350 | 42.529 | 87 | 45 | 3 | 133 | 217 | 20 | 103 | 1.17e-11 | 64.7 |
MS.gene02861.t1 | MTR_5g014040 | 43.038 | 79 | 44 | 1 | 27 | 105 | 289 | 366 | 1.57e-11 | 65.5 |
MS.gene02861.t1 | MTR_4g086835 | 60.000 | 55 | 21 | 1 | 49 | 103 | 274 | 327 | 1.61e-11 | 65.1 |
MS.gene02861.t1 | MTR_7g089010 | 58.182 | 55 | 22 | 1 | 49 | 103 | 91 | 144 | 1.74e-11 | 64.3 |
MS.gene02861.t1 | MTR_4g021855 | 50.794 | 63 | 30 | 1 | 41 | 103 | 160 | 221 | 3.06e-11 | 63.5 |
MS.gene02861.t1 | MTR_2g450070 | 54.545 | 55 | 24 | 1 | 49 | 103 | 213 | 266 | 3.46e-11 | 64.7 |
MS.gene02861.t1 | MTR_4g021760 | 52.308 | 65 | 28 | 2 | 49 | 113 | 169 | 230 | 3.48e-11 | 63.5 |
MS.gene02861.t1 | MTR_2g450070 | 54.545 | 55 | 24 | 1 | 49 | 103 | 213 | 266 | 3.57e-11 | 64.7 |
MS.gene02861.t1 | MTR_4g078810 | 53.704 | 54 | 24 | 1 | 49 | 102 | 158 | 210 | 6.38e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02861.t1 | AT2G01060 | 66.779 | 298 | 69 | 9 | 43 | 330 | 9 | 286 | 4.74e-119 | 345 |
MS.gene02861.t1 | AT2G01060 | 62.646 | 257 | 66 | 9 | 84 | 330 | 1 | 237 | 1.82e-88 | 265 |
MS.gene02861.t1 | AT5G29000 | 57.692 | 156 | 63 | 2 | 29 | 183 | 170 | 323 | 1.86e-51 | 174 |
MS.gene02861.t1 | AT5G29000 | 57.692 | 156 | 63 | 2 | 29 | 183 | 170 | 323 | 1.86e-51 | 174 |
MS.gene02861.t1 | AT5G29000 | 57.692 | 156 | 63 | 2 | 29 | 183 | 213 | 366 | 3.74e-51 | 175 |
MS.gene02861.t1 | AT3G04450 | 52.273 | 176 | 76 | 3 | 44 | 212 | 193 | 367 | 8.60e-51 | 174 |
MS.gene02861.t1 | AT3G04450 | 52.273 | 176 | 76 | 3 | 44 | 212 | 193 | 367 | 8.60e-51 | 174 |
MS.gene02861.t1 | AT3G04450 | 52.273 | 176 | 76 | 3 | 44 | 212 | 233 | 407 | 1.43e-50 | 174 |
MS.gene02861.t1 | AT4G28610 | 52.432 | 185 | 80 | 4 | 41 | 225 | 217 | 393 | 3.97e-50 | 172 |
MS.gene02861.t1 | AT5G06800 | 57.534 | 146 | 57 | 3 | 37 | 182 | 182 | 322 | 5.61e-50 | 171 |
MS.gene02861.t1 | AT3G13040 | 50.265 | 189 | 86 | 4 | 44 | 227 | 236 | 421 | 1.88e-49 | 171 |
MS.gene02861.t1 | AT3G13040 | 50.265 | 189 | 86 | 4 | 44 | 227 | 236 | 421 | 1.88e-49 | 171 |
MS.gene02861.t1 | AT3G13040 | 50.265 | 189 | 86 | 4 | 44 | 227 | 236 | 421 | 1.88e-49 | 171 |
MS.gene02861.t1 | AT4G13640 | 59.574 | 141 | 47 | 2 | 49 | 179 | 37 | 177 | 1.90e-49 | 167 |
MS.gene02861.t1 | AT3G24120 | 58.156 | 141 | 49 | 2 | 49 | 179 | 41 | 181 | 8.24e-49 | 165 |
MS.gene02861.t1 | AT5G06800 | 55.705 | 149 | 60 | 3 | 37 | 182 | 182 | 327 | 8.51e-49 | 168 |
MS.gene02861.t1 | AT1G79430 | 61.268 | 142 | 47 | 3 | 49 | 185 | 34 | 172 | 2.63e-48 | 166 |
MS.gene02861.t1 | AT4G13640 | 58.333 | 144 | 47 | 3 | 49 | 179 | 37 | 180 | 2.99e-47 | 161 |
MS.gene02861.t1 | AT3G24120 | 56.944 | 144 | 49 | 3 | 49 | 179 | 41 | 184 | 9.47e-47 | 160 |
MS.gene02861.t1 | AT3G04030 | 48.333 | 180 | 72 | 4 | 23 | 185 | 19 | 194 | 9.00e-43 | 152 |
MS.gene02861.t1 | AT1G69580 | 49.693 | 163 | 65 | 3 | 47 | 192 | 32 | 194 | 1.06e-42 | 150 |
MS.gene02861.t1 | AT2G20400 | 53.165 | 158 | 71 | 2 | 49 | 206 | 231 | 385 | 1.06e-42 | 152 |
MS.gene02861.t1 | AT1G69580 | 49.091 | 165 | 62 | 4 | 47 | 192 | 32 | 193 | 1.20e-42 | 150 |
MS.gene02861.t1 | AT2G20400 | 53.797 | 158 | 69 | 2 | 49 | 206 | 231 | 384 | 1.35e-42 | 152 |
MS.gene02861.t1 | AT5G18240 | 51.316 | 152 | 61 | 1 | 47 | 185 | 43 | 194 | 3.81e-42 | 150 |
MS.gene02861.t1 | AT5G18240 | 51.316 | 152 | 61 | 1 | 47 | 185 | 43 | 194 | 3.81e-42 | 150 |
MS.gene02861.t1 | AT3G04030 | 47.778 | 180 | 72 | 5 | 23 | 185 | 19 | 193 | 3.71e-40 | 145 |
MS.gene02861.t1 | AT5G18240 | 50.000 | 152 | 61 | 2 | 47 | 185 | 43 | 192 | 8.00e-39 | 142 |
MS.gene02861.t1 | AT5G45580 | 45.223 | 157 | 56 | 3 | 49 | 182 | 7 | 156 | 4.37e-37 | 134 |
MS.gene02861.t1 | AT3G04030 | 45.556 | 180 | 71 | 5 | 23 | 185 | 19 | 188 | 7.53e-37 | 136 |
MS.gene02861.t1 | AT5G45580 | 45.860 | 157 | 55 | 3 | 49 | 182 | 23 | 172 | 8.14e-37 | 134 |
MS.gene02861.t1 | AT5G18240 | 48.026 | 152 | 60 | 2 | 47 | 185 | 43 | 188 | 3.22e-36 | 135 |
MS.gene02861.t1 | AT5G18240 | 48.026 | 152 | 60 | 2 | 47 | 185 | 43 | 188 | 3.22e-36 | 135 |
MS.gene02861.t1 | AT3G12730 | 47.826 | 138 | 64 | 4 | 49 | 179 | 23 | 159 | 3.39e-35 | 128 |
MS.gene02861.t1 | AT1G79430 | 54.545 | 110 | 42 | 3 | 81 | 185 | 1 | 107 | 4.63e-27 | 108 |
MS.gene02861.t1 | AT5G29000 | 60.674 | 89 | 33 | 1 | 29 | 117 | 213 | 299 | 3.00e-25 | 103 |
MS.gene02861.t1 | AT3G04450 | 64.286 | 70 | 25 | 0 | 44 | 113 | 233 | 302 | 3.59e-25 | 103 |
MS.gene02861.t1 | AT3G04030 | 49.153 | 118 | 47 | 2 | 81 | 185 | 1 | 118 | 1.28e-24 | 102 |
MS.gene02861.t1 | AT5G06800 | 60.563 | 71 | 26 | 1 | 45 | 115 | 188 | 256 | 6.27e-24 | 99.4 |
MS.gene02861.t1 | AT3G04030 | 44.915 | 118 | 46 | 3 | 81 | 185 | 1 | 112 | 4.79e-19 | 86.7 |
MS.gene02861.t1 | AT5G18240 | 43.220 | 118 | 48 | 2 | 81 | 185 | 1 | 112 | 5.23e-19 | 86.7 |
MS.gene02861.t1 | AT2G06020 | 59.649 | 57 | 23 | 0 | 49 | 105 | 86 | 142 | 7.29e-18 | 83.2 |
MS.gene02861.t1 | AT2G42660 | 65.517 | 58 | 20 | 0 | 51 | 108 | 52 | 109 | 3.05e-17 | 80.5 |
MS.gene02861.t1 | AT2G40260 | 57.333 | 75 | 20 | 1 | 51 | 125 | 84 | 146 | 3.22e-17 | 82.4 |
MS.gene02861.t1 | AT4G04605 | 69.231 | 52 | 16 | 0 | 51 | 102 | 16 | 67 | 4.15e-17 | 79.3 |
MS.gene02861.t1 | AT1G32240 | 43.396 | 106 | 51 | 2 | 51 | 156 | 215 | 311 | 1.80e-16 | 80.1 |
MS.gene02861.t1 | AT1G32240 | 43.396 | 106 | 51 | 2 | 51 | 156 | 215 | 311 | 2.20e-16 | 79.3 |
MS.gene02861.t1 | AT5G42630 | 57.576 | 66 | 28 | 0 | 51 | 116 | 107 | 172 | 4.97e-16 | 76.3 |
MS.gene02861.t1 | AT5G42630 | 57.576 | 66 | 28 | 0 | 51 | 116 | 107 | 172 | 6.11e-16 | 77.0 |
MS.gene02861.t1 | AT3G12730 | 39.623 | 106 | 56 | 4 | 81 | 179 | 1 | 105 | 1.36e-15 | 74.3 |
MS.gene02861.t1 | AT5G16560 | 60.000 | 65 | 24 | 1 | 51 | 113 | 221 | 285 | 1.67e-15 | 77.0 |
MS.gene02861.t1 | AT1G14600 | 69.231 | 52 | 16 | 0 | 51 | 102 | 25 | 76 | 2.12e-15 | 75.1 |
MS.gene02861.t1 | AT4G17695 | 63.636 | 55 | 20 | 0 | 51 | 105 | 166 | 220 | 3.43e-15 | 75.5 |
MS.gene02861.t1 | AT2G38300 | 63.636 | 55 | 20 | 0 | 51 | 105 | 56 | 110 | 3.64e-15 | 75.9 |
MS.gene02861.t1 | AT2G02060 | 69.231 | 52 | 16 | 0 | 51 | 102 | 31 | 82 | 3.68e-15 | 74.7 |
MS.gene02861.t1 | AT2G02060 | 69.231 | 52 | 16 | 0 | 51 | 102 | 31 | 82 | 3.68e-15 | 74.7 |
MS.gene02861.t1 | AT4G37180 | 60.000 | 55 | 22 | 0 | 49 | 103 | 210 | 264 | 3.46e-14 | 72.8 |
MS.gene02861.t1 | AT4G37180 | 60.000 | 55 | 22 | 0 | 49 | 103 | 217 | 271 | 4.03e-14 | 72.8 |
MS.gene02861.t1 | AT4G04580 | 54.545 | 55 | 25 | 0 | 51 | 105 | 16 | 70 | 1.24e-13 | 68.6 |
MS.gene02861.t1 | AT1G49560 | 54.545 | 66 | 30 | 0 | 49 | 114 | 192 | 257 | 1.66e-13 | 70.9 |
MS.gene02861.t1 | AT3G25790 | 58.182 | 55 | 23 | 0 | 54 | 108 | 201 | 255 | 3.06e-13 | 70.1 |
MS.gene02861.t1 | AT1G25550 | 55.385 | 65 | 29 | 0 | 44 | 108 | 204 | 268 | 5.89e-13 | 69.3 |
MS.gene02861.t1 | AT3G10760 | 48.101 | 79 | 40 | 1 | 25 | 103 | 81 | 158 | 7.73e-13 | 68.9 |
MS.gene02861.t1 | AT1G13300 | 44.086 | 93 | 41 | 2 | 16 | 108 | 159 | 240 | 1.37e-12 | 68.2 |
MS.gene02861.t1 | AT1G68670 | 48.052 | 77 | 40 | 0 | 42 | 118 | 208 | 284 | 2.11e-12 | 67.8 |
MS.gene02861.t1 | AT5G05090 | 60.377 | 53 | 20 | 1 | 51 | 103 | 83 | 134 | 4.09e-12 | 65.9 |
MS.gene02861.t1 | AT4G37180 | 55.172 | 58 | 26 | 0 | 49 | 106 | 210 | 267 | 5.94e-12 | 65.5 |
MS.gene02861.t1 | AT5G58080 | 52.174 | 69 | 28 | 3 | 49 | 117 | 194 | 257 | 6.55e-12 | 67.0 |
MS.gene02861.t1 | AT5G59570 | 58.491 | 53 | 21 | 1 | 51 | 103 | 143 | 194 | 9.95e-12 | 65.1 |
MS.gene02861.t1 | AT5G59570 | 58.491 | 53 | 21 | 1 | 51 | 103 | 143 | 194 | 9.95e-12 | 65.1 |
MS.gene02861.t1 | AT3G46640 | 58.491 | 53 | 21 | 1 | 51 | 103 | 146 | 197 | 1.21e-11 | 65.1 |
MS.gene02861.t1 | AT3G46640 | 58.491 | 53 | 21 | 1 | 51 | 103 | 146 | 197 | 1.21e-11 | 65.1 |
MS.gene02861.t1 | AT2G20570 | 51.471 | 68 | 31 | 2 | 35 | 102 | 140 | 205 | 1.25e-11 | 65.5 |
MS.gene02861.t1 | AT3G46640 | 58.491 | 53 | 21 | 1 | 51 | 103 | 146 | 197 | 1.27e-11 | 65.1 |
MS.gene02861.t1 | AT2G03500 | 53.226 | 62 | 29 | 0 | 47 | 108 | 231 | 292 | 1.53e-11 | 65.5 |
MS.gene02861.t1 | AT2G01760 | 45.333 | 75 | 38 | 2 | 49 | 123 | 135 | 206 | 1.56e-11 | 64.7 |
MS.gene02861.t1 | AT5G44190 | 46.154 | 65 | 34 | 1 | 38 | 102 | 136 | 199 | 2.52e-11 | 64.7 |
MS.gene02861.t1 | AT2G01760 | 45.333 | 75 | 38 | 2 | 49 | 123 | 200 | 271 | 2.96e-11 | 64.3 |
MS.gene02861.t1 | AT5G44190 | 46.154 | 65 | 34 | 1 | 38 | 102 | 136 | 199 | 3.00e-11 | 64.3 |
MS.gene02861.t1 | AT2G01760 | 45.333 | 75 | 38 | 2 | 49 | 123 | 228 | 299 | 3.92e-11 | 63.9 |
MS.gene02861.t1 | AT2G40970 | 56.364 | 55 | 23 | 1 | 49 | 103 | 105 | 158 | 4.48e-11 | 62.8 |
Find 87 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTTCCTGATTCGAGTTTAAT+TGG | 0.223090 | 2.4:-61307775 | MS.gene02861:CDS |
GATCACTTTGATCCTTCTTT+AGG | 0.297515 | 2.4:-61305887 | MS.gene02861:CDS |
CCATGTTAAGAGCCATTTGC+AGG | 0.349218 | 2.4:-61307333 | MS.gene02861:intron |
TACAAGAAGTGGTGAGGAAT+TGG | 0.349818 | 2.4:-61305858 | MS.gene02861:CDS |
TGCAGAGACAGCTACAATTA+AGG | 0.349960 | 2.4:-61306330 | MS.gene02861:CDS |
CTTCCAATTAAACTCGAATC+AGG | 0.368180 | 2.4:+61307772 | None:intergenic |
TTAGTTGATCTCTCGCCATT+AGG | 0.374486 | 2.4:+61306028 | None:intergenic |
CATAACTCTGAGGACACCTT+TGG | 0.375653 | 2.4:+61307379 | None:intergenic |
CAAAGGTGTCCTCAGAGTTA+TGG | 0.377183 | 2.4:-61307378 | MS.gene02861:CDS |
ATGTGCTGACCATGAACTAA+TGG | 0.385679 | 2.4:+61307745 | None:intergenic |
GAACCGATGACACCAGATTC+TGG | 0.386395 | 2.4:-61306079 | MS.gene02861:CDS |
AAGACTGACAAGAAAGAAAC+GGG | 0.390608 | 2.4:-61307035 | MS.gene02861:CDS |
TGAGTTGAGATTAGAGTTGT+TGG | 0.390955 | 2.4:+61307672 | None:intergenic |
GGAAAACAGCGGTTGGTTGC+TGG | 0.394253 | 2.4:+61305918 | None:intergenic |
AAAGGTGTCCTCAGAGTTAT+GGG | 0.402741 | 2.4:-61307377 | MS.gene02861:CDS |
ACAATTAAGGATAGAAGCTC+AGG | 0.410929 | 2.4:-61306317 | MS.gene02861:CDS |
GGAAGCAATCCATTAGTTCA+TGG | 0.415844 | 2.4:-61307754 | MS.gene02861:CDS |
CTCGAATCAGGAACATTAGT+TGG | 0.419130 | 2.4:+61307784 | None:intergenic |
CATTTGAAGCTTTAGTGCTT+CGG | 0.424328 | 2.4:+61306655 | None:intergenic |
GATATGCTTTCCAATCTAGA+TGG | 0.424452 | 2.4:-61307011 | MS.gene02861:CDS |
TCCTGTTGGGACATATCTCC+TGG | 0.428112 | 2.4:+61306205 | None:intergenic |
TCAGCTGAAAGACTCTTTGC+TGG | 0.432190 | 2.4:+61306121 | None:intergenic |
GGTGCTTCCTCATCAGATAC+TGG | 0.444138 | 2.4:-61305960 | MS.gene02861:CDS |
CTTTCAGAAGCACCCGGCTC+TGG | 0.447624 | 2.4:-61306244 | MS.gene02861:CDS |
CCGACTTGGCAACCAGAATC+TGG | 0.448662 | 2.4:+61306067 | None:intergenic |
TCTCCTGCTGACAGTCCTAA+TGG | 0.454643 | 2.4:-61306043 | MS.gene02861:CDS |
TCACGATGAACCATCTAGAT+TGG | 0.455940 | 2.4:+61307001 | None:intergenic |
GTTGATGCTGTGGCTCAACT+TGG | 0.466308 | 2.4:-61307607 | MS.gene02861:CDS |
AAGAAGGATCAAAGTGATCT+CGG | 0.468691 | 2.4:+61305891 | None:intergenic |
GAAGCGACTACATGAACAAT+TGG | 0.469698 | 2.4:-61306624 | MS.gene02861:CDS |
CGAAGCACTAAAGCTTCAAA+TGG | 0.471790 | 2.4:-61306654 | MS.gene02861:CDS |
TCCAGGAGATATGTCCCAAC+AGG | 0.476349 | 2.4:-61306206 | MS.gene02861:CDS |
ATAACTCTGAGGACACCTTT+GGG | 0.476739 | 2.4:+61307380 | None:intergenic |
TCTTATTGTCGAGCTCCTGT+TGG | 0.481895 | 2.4:+61306191 | None:intergenic |
CTTATTGTCGAGCTCCTGTT+GGG | 0.485642 | 2.4:+61306192 | None:intergenic |
CTCAGAGTTATGGGTGTACA+AGG | 0.485843 | 2.4:-61307368 | MS.gene02861:CDS |
GGTAGGAGCGCTATGGATCC+TGG | 0.493466 | 2.4:-61307715 | MS.gene02861:CDS |
CATGGTCAGCACATAGAGTC+TGG | 0.500025 | 2.4:-61307736 | MS.gene02861:CDS |
GAGTGCACATTACCTGCAAA+TGG | 0.500488 | 2.4:+61307321 | None:intergenic |
AAAGACTGACAAGAAAGAAA+CGG | 0.503951 | 2.4:-61307036 | MS.gene02861:CDS |
TCCTTAGGTGCCACACCCAA+AGG | 0.508503 | 2.4:-61307395 | MS.gene02861:intron |
GATGCTGTGGCTCAACTTGG+TGG | 0.512420 | 2.4:-61307604 | MS.gene02861:CDS |
GCTCGACAATAAGACTGAAC+CGG | 0.517717 | 2.4:-61306182 | MS.gene02861:CDS |
TGGTGCTGATACACCAGAGC+CGG | 0.522258 | 2.4:+61306231 | None:intergenic |
AATCTGGTGTCATCGGTTCA+TGG | 0.523061 | 2.4:+61306083 | None:intergenic |
GATCAAAGTGATCTCGGGTA+AGG | 0.525714 | 2.4:+61305897 | None:intergenic |
CCTGCAAATGGCTCTTAACA+TGG | 0.525821 | 2.4:+61307333 | None:intergenic |
CCAGATTCTGGTTGCCAAGT+CGG | 0.528854 | 2.4:-61306067 | MS.gene02861:CDS |
GTACCATCGGATGAGCAGTC+AGG | 0.531157 | 2.4:+61307201 | None:intergenic |
ACTCAAAGCAACGTTTGCGT+TGG | 0.531602 | 2.4:-61307654 | MS.gene02861:CDS |
AGAAGGATCAAAGTGATCTC+GGG | 0.531953 | 2.4:+61305892 | None:intergenic |
GGTGTATCAGCACCAACTCC+AGG | 0.533448 | 2.4:-61306223 | MS.gene02861:CDS |
AGCGCTATGGATCCTGGTAG+TGG | 0.534994 | 2.4:-61307709 | MS.gene02861:CDS |
CTTGTAGACATGCCTAAAGA+AGG | 0.541592 | 2.4:+61305875 | None:intergenic |
TTAGGCATGTCTACAAGAAG+TGG | 0.546196 | 2.4:-61305869 | MS.gene02861:CDS |
CGGGTAAGGAAAACAGCGGT+TGG | 0.546421 | 2.4:+61305911 | None:intergenic |
GGTGCTGATACACCAGAGCC+GGG | 0.552630 | 2.4:+61306232 | None:intergenic |
TCTGAGGACACCTTTGGGTG+TGG | 0.554653 | 2.4:+61307385 | None:intergenic |
CAACCAGAATCTGGTGTCAT+CGG | 0.558599 | 2.4:+61306076 | None:intergenic |
AGAGTCTGGTAGGAGCGCTA+TGG | 0.562642 | 2.4:-61307722 | MS.gene02861:CDS |
GCGGTTGGTTGCTGGTATGA+TGG | 0.564870 | 2.4:+61305926 | None:intergenic |
TGTCAGCAGGAGAACCGACT+TGG | 0.567410 | 2.4:+61306053 | None:intergenic |
AATTGGATAAGCTTGGTGGC+AGG | 0.568213 | 2.4:-61305841 | MS.gene02861:CDS |
TGGGACATATCTCCTGGAGT+TGG | 0.568536 | 2.4:+61306211 | None:intergenic |
AGACTGTTTCCTCCACTACC+AGG | 0.568775 | 2.4:+61307697 | None:intergenic |
AAGAGCAACAGCGACTCAGT+GGG | 0.575024 | 2.4:-61306270 | MS.gene02861:CDS |
TCGCCATTAGGACTGTCAGC+AGG | 0.575904 | 2.4:+61306040 | None:intergenic |
GGTGAGGAATTGGATAAGCT+TGG | 0.592014 | 2.4:-61305848 | MS.gene02861:CDS |
TTACCTGACTGCTCATCCGA+TGG | 0.595863 | 2.4:-61307204 | MS.gene02861:intron |
GCGACTACATGAACAATTGG+AGG | 0.598747 | 2.4:-61306621 | MS.gene02861:intron |
TGAACGCTTTGTTGATGCTG+TGG | 0.601507 | 2.4:-61307617 | MS.gene02861:CDS |
GGGGTTCTTTCAGAAGCACC+CGG | 0.619430 | 2.4:-61306250 | MS.gene02861:CDS |
GTCAGCACATAGAGTCTGGT+AGG | 0.630464 | 2.4:-61307732 | MS.gene02861:CDS |
AGCACTAAAGCTTCAAATGG+AGG | 0.636135 | 2.4:-61306651 | MS.gene02861:CDS |
GAAGAGCAACAGCGACTCAG+TGG | 0.642615 | 2.4:-61306271 | MS.gene02861:CDS |
CTTGACTCCAGTATCTGATG+AGG | 0.648174 | 2.4:+61305953 | None:intergenic |
CATGTCTACAAGAAGTGGTG+AGG | 0.650625 | 2.4:-61305864 | MS.gene02861:CDS |
GAGGAATTGGATAAGCTTGG+TGG | 0.651592 | 2.4:-61305845 | MS.gene02861:CDS |
CAATTAAGGATAGAAGCTCA+GGG | 0.654933 | 2.4:-61306316 | MS.gene02861:CDS |
GGGGAAAATACTCACGATCG+GGG | 0.658151 | 2.4:+61307581 | None:intergenic |
GCTATGGATCCTGGTAGTGG+AGG | 0.662575 | 2.4:-61307706 | MS.gene02861:CDS |
GACTGACAAGAAAGAAACGG+GGG | 0.678708 | 2.4:-61307033 | MS.gene02861:CDS |
AGCGTATTTGAAATCAGACA+TGG | 0.689566 | 2.4:-61305981 | MS.gene02861:CDS |
AGAGCAACAGCGACTCAGTG+GGG | 0.711050 | 2.4:-61306269 | MS.gene02861:CDS |
CTTGTACACCCATAACTCTG+AGG | 0.715783 | 2.4:+61307369 | None:intergenic |
ATCTCGGGTAAGGAAAACAG+CGG | 0.741797 | 2.4:+61305907 | None:intergenic |
AGACTGACAAGAAAGAAACG+GGG | 0.753105 | 2.4:-61307034 | MS.gene02861:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | CATTAAAAAAACAAGAATAA+TGG | + | chr2.4:61306351-61306370 | None:intergenic | 15.0% |
!!! | GATTTAAAAACTTTTAGATA+AGG | + | chr2.4:61306197-61306216 | None:intergenic | 15.0% |
!!! | TAAAAAGTTATGTTTCTTTT+AGG | - | chr2.4:61306810-61306829 | MS.gene02861:intron | 15.0% |
!! | AAAGTTATCAGCAAATTTAA+AGG | + | chr2.4:61306547-61306566 | None:intergenic | 20.0% |
!! | AAATCAGTAAGATCTAAATA+TGG | + | chr2.4:61306473-61306492 | None:intergenic | 20.0% |
!! | AGAATGCTTAATACTTTAAA+CGG | + | chr2.4:61306508-61306527 | None:intergenic | 20.0% |
!! | TAGAAAAAATAACAGTTACA+AGG | + | chr2.4:61307264-61307283 | None:intergenic | 20.0% |
!! | TATCATAATTATACAAGGAA+TGG | - | chr2.4:61306674-61306693 | MS.gene02861:intron | 20.0% |
!!! | ACTTTTTAATTGTCTTATAG+AGG | - | chr2.4:61306562-61306581 | MS.gene02861:intron | 20.0% |
!!! | CTTTATTTTGAATCAAGTAA+AGG | - | chr2.4:61307198-61307217 | MS.gene02861:intron | 20.0% |
!!! | CTTTTTAATTGTCTTATAGA+GGG | - | chr2.4:61306563-61306582 | MS.gene02861:intron | 20.0% |
!!! | TTATTTTTTCTATGTGAAAC+AGG | - | chr2.4:61307272-61307291 | MS.gene02861:intron | 20.0% |
!!! | TTTTTAATTGTCTTATAGAG+GGG | - | chr2.4:61306564-61306583 | MS.gene02861:intron | 20.0% |
! | ATTTCAGCTAACGAAAAAAT+GGG | + | chr2.4:61306067-61306086 | None:intergenic | 25.0% |
! | TAAATTCATCATCTAGCATT+AGG | + | chr2.4:61306159-61306178 | None:intergenic | 25.0% |
! | TGGGTTATCATAATTATACA+AGG | - | chr2.4:61306669-61306688 | MS.gene02861:CDS | 25.0% |
! | TTGGTTACATCATACATATT+TGG | - | chr2.4:61306100-61306119 | MS.gene02861:CDS | 25.0% |
!! | CAGATATCAAATACTTTTGT+TGG | - | chr2.4:61306125-61306144 | MS.gene02861:CDS | 25.0% |
!!! | TATAGATTTTTTTCCACCAA+CGG | + | chr2.4:61306853-61306872 | None:intergenic | 25.0% |
AAAGACTGACAAGAAAGAAA+CGG | - | chr2.4:61306589-61306608 | MS.gene02861:intron | 30.0% | |
AAGGAATAATAGACAGAATG+AGG | - | chr2.4:61307217-61307236 | MS.gene02861:CDS | 30.0% | |
AATAATGTTACATGTCTGCA+GGG | - | chr2.4:61306935-61306954 | MS.gene02861:intron | 30.0% | |
AGGAATAATAGACAGAATGA+GGG | - | chr2.4:61307218-61307237 | MS.gene02861:CDS | 30.0% | |
ATGATAACCCAAAAGCAAAA+AGG | + | chr2.4:61306660-61306679 | None:intergenic | 30.0% | |
ATTTAAAGGAGGAAACAAAG+TGG | + | chr2.4:61306533-61306552 | None:intergenic | 30.0% | |
CATTTCAGCTAACGAAAAAA+TGG | + | chr2.4:61306068-61306087 | None:intergenic | 30.0% | |
CTAAATAGAACCATCTCATT+TGG | - | chr2.4:61306746-61306765 | MS.gene02861:intron | 30.0% | |
GTGAGATGAAATGATGATAT+TGG | - | chr2.4:61307114-61307133 | MS.gene02861:intron | 30.0% | |
GTTATCAGCAAATTTAAAGG+AGG | + | chr2.4:61306544-61306563 | None:intergenic | 30.0% | |
TAATAATGTTACATGTCTGC+AGG | - | chr2.4:61306934-61306953 | MS.gene02861:intron | 30.0% | |
TGAAATGTAATGCGTAGAAT+TGG | - | chr2.4:61306081-61306100 | MS.gene02861:CDS | 30.0% | |
TGATAACCCAAAAGCAAAAA+GGG | + | chr2.4:61306659-61306678 | None:intergenic | 30.0% | |
TGCTAGATGATGAATTTATC+AGG | - | chr2.4:61306161-61306180 | MS.gene02861:CDS | 30.0% | |
TTTCAGCTAACGAAAAAATG+GGG | + | chr2.4:61306066-61306085 | None:intergenic | 30.0% | |
! | TCTATACTATCCTTTTCCTT+AGG | - | chr2.4:61306215-61306234 | MS.gene02861:CDS | 30.0% |
!! | ATAATGGATACCACATTAAG+AGG | + | chr2.4:61306335-61306354 | None:intergenic | 30.0% |
!!! | ATAGATTTTTTTCCACCAAC+GGG | + | chr2.4:61306852-61306871 | None:intergenic | 30.0% |
AAATCAGATTGACGTACCAT+CGG | + | chr2.4:61306440-61306459 | None:intergenic | 35.0% | |
AAGAAGGATCAAAGTGATCT+CGG | + | chr2.4:61307737-61307756 | None:intergenic | 35.0% | |
AAGACTGACAAGAAAGAAAC+GGG | - | chr2.4:61306590-61306609 | MS.gene02861:intron | 35.0% | |
ACAATTAAGGATAGAAGCTC+AGG | - | chr2.4:61307308-61307327 | MS.gene02861:intron | 35.0% | |
ATAATGTTACATGTCTGCAG+GGG | - | chr2.4:61306936-61306955 | MS.gene02861:intron | 35.0% | |
CAATTAAGGATAGAAGCTCA+GGG | - | chr2.4:61307309-61307328 | MS.gene02861:intron | 35.0% | |
CTTCCAATTAAACTCGAATC+AGG | + | chr2.4:61305856-61305875 | None:intergenic | 35.0% | |
GATATGCTTTCCAATCTAGA+TGG | - | chr2.4:61306614-61306633 | MS.gene02861:intron | 35.0% | |
GATCACTTTGATCCTTCTTT+AGG | - | chr2.4:61307738-61307757 | MS.gene02861:CDS | 35.0% | |
GGATGTAAAACCAAATGAGA+TGG | + | chr2.4:61306759-61306778 | None:intergenic | 35.0% | |
! | AGCGTATTTGAAATCAGACA+TGG | - | chr2.4:61307644-61307663 | MS.gene02861:CDS | 35.0% |
! | ATAGCTTCCCTTTTTGCTTT+TGG | - | chr2.4:61306649-61306668 | MS.gene02861:CDS | 35.0% |
! | CAGGTAAGTATTTTGCTAGT+CGG | + | chr2.4:61306408-61306427 | None:intergenic | 35.0% |
! | CATTTGAAGCTTTAGTGCTT+CGG | + | chr2.4:61306973-61306992 | None:intergenic | 35.0% |
! | GAGATGGTTCTATTTAGTTC+AGG | + | chr2.4:61306743-61306762 | None:intergenic | 35.0% |
! | GTTCCTGATTCGAGTTTAAT+TGG | - | chr2.4:61305850-61305869 | MS.gene02861:CDS | 35.0% |
! | TGAGTTGAGATTAGAGTTGT+TGG | + | chr2.4:61305956-61305975 | None:intergenic | 35.0% |
!! | TAGCTTCCCTTTTTGCTTTT+GGG | - | chr2.4:61306650-61306669 | MS.gene02861:CDS | 35.0% |
!!! | TCTCATTTGGTTTTACATCC+TGG | - | chr2.4:61306759-61306778 | MS.gene02861:intron | 35.0% |
ACTAGTGCAAATTTGACTCC+AGG | + | chr2.4:61306780-61306799 | None:intergenic | 40.0% | |
AGAAGGATCAAAGTGATCTC+GGG | + | chr2.4:61307736-61307755 | None:intergenic | 40.0% | |
AGACTGACAAGAAAGAAACG+GGG | - | chr2.4:61306591-61306610 | MS.gene02861:intron | 40.0% | |
AGCACTAAAGCTTCAAATGG+AGG | - | chr2.4:61306974-61306993 | MS.gene02861:intron | 40.0% | |
ATGGGGAAAATACTCACGAT+CGG | + | chr2.4:61306049-61306068 | None:intergenic | 40.0% | |
CAGATCAGATCAGTTCAACA+AGG | + | chr2.4:61307037-61307056 | None:intergenic | 40.0% | |
CTCGAATCAGGAACATTAGT+TGG | + | chr2.4:61305844-61305863 | None:intergenic | 40.0% | |
CTTGTAGACATGCCTAAAGA+AGG | + | chr2.4:61307753-61307772 | None:intergenic | 40.0% | |
GAAGCGACTACATGAACAAT+TGG | - | chr2.4:61307001-61307020 | MS.gene02861:intron | 40.0% | |
GGAAGCAATCCATTAGTTCA+TGG | - | chr2.4:61305871-61305890 | MS.gene02861:CDS | 40.0% | |
TAAAAAGCAACGAGTAAGCG+TGG | - | chr2.4:61307617-61307636 | MS.gene02861:CDS | 40.0% | |
TAATGTTACATGTCTGCAGG+GGG | - | chr2.4:61306937-61306956 | MS.gene02861:intron | 40.0% | |
TACAAGAAGTGGTGAGGAAT+TGG | - | chr2.4:61307767-61307786 | MS.gene02861:CDS | 40.0% | |
TCACGATGAACCATCTAGAT+TGG | + | chr2.4:61306627-61306646 | None:intergenic | 40.0% | |
TGCAGAGACAGCTACAATTA+AGG | - | chr2.4:61307295-61307314 | MS.gene02861:intron | 40.0% | |
TTAGGCATGTCTACAAGAAG+TGG | - | chr2.4:61307756-61307775 | MS.gene02861:CDS | 40.0% | |
TTAGTTGATCTCTCGCCATT+AGG | + | chr2.4:61307600-61307619 | None:intergenic | 40.0% | |
! | ATAACTCTGAGGACACCTTT+GGG | + | chr2.4:61306248-61306267 | None:intergenic | 40.0% |
! | ATGTGCTGACCATGAACTAA+TGG | + | chr2.4:61305883-61305902 | None:intergenic | 40.0% |
! | CGAAGCACTAAAGCTTCAAA+TGG | - | chr2.4:61306971-61306990 | MS.gene02861:intron | 40.0% |
! | TGCTAGTCGGTATTTCTGTA+TGG | + | chr2.4:61306395-61306414 | None:intergenic | 40.0% |
!! | AAAGGTGTCCTCAGAGTTAT+GGG | - | chr2.4:61306248-61306267 | MS.gene02861:CDS | 40.0% |
!! | GCTCTTTAGCAGCTTTTTCT+GGG | + | chr2.4:61307479-61307498 | None:intergenic | 40.0% |
!! | TGCTCTTTAGCAGCTTTTTC+TGG | + | chr2.4:61307480-61307499 | None:intergenic | 40.0% |
ACTCAAAGCAACGTTTGCGT+TGG | - | chr2.4:61305971-61305990 | MS.gene02861:CDS | 45.0% | |
ATCTCGGGTAAGGAAAACAG+CGG | + | chr2.4:61307721-61307740 | None:intergenic | 45.0% | |
ATTCAATGCCTCAAACCCGT+TGG | - | chr2.4:61306834-61306853 | MS.gene02861:intron | 45.0% | |
CACTCTAGGTCCTCTTAATG+TGG | - | chr2.4:61306322-61306341 | MS.gene02861:CDS | 45.0% | |
CATGTCTACAAGAAGTGGTG+AGG | - | chr2.4:61307761-61307780 | MS.gene02861:CDS | 45.0% | |
CCATGTTAAGAGCCATTTGC+AGG | - | chr2.4:61306292-61306311 | MS.gene02861:CDS | 45.0% | |
CCTGCAAATGGCTCTTAACA+TGG | + | chr2.4:61306295-61306314 | None:intergenic | 45.0% | |
CTCAGAGTTATGGGTGTACA+AGG | - | chr2.4:61306257-61306276 | MS.gene02861:CDS | 45.0% | |
CTTATTGTCGAGCTCCTGTT+GGG | + | chr2.4:61307436-61307455 | None:intergenic | 45.0% | |
CTTGACTCCAGTATCTGATG+AGG | + | chr2.4:61307675-61307694 | None:intergenic | 45.0% | |
CTTGTACACCCATAACTCTG+AGG | + | chr2.4:61306259-61306278 | None:intergenic | 45.0% | |
GACTGACAAGAAAGAAACGG+GGG | - | chr2.4:61306592-61306611 | MS.gene02861:intron | 45.0% | |
GAGGAATTGGATAAGCTTGG+TGG | - | chr2.4:61307780-61307799 | MS.gene02861:CDS | 45.0% | |
GAGTGCACATTACCTGCAAA+TGG | + | chr2.4:61306307-61306326 | None:intergenic | 45.0% | |
GATCAAAGTGATCTCGGGTA+AGG | + | chr2.4:61307731-61307750 | None:intergenic | 45.0% | |
GCGACTACATGAACAATTGG+AGG | - | chr2.4:61307004-61307023 | MS.gene02861:intron | 45.0% | |
GCTCGACAATAAGACTGAAC+CGG | - | chr2.4:61307443-61307462 | MS.gene02861:intron | 45.0% | |
GGTGAGGAATTGGATAAGCT+TGG | - | chr2.4:61307777-61307796 | MS.gene02861:CDS | 45.0% | |
TCAGCTGAAAGACTCTTTGC+TGG | + | chr2.4:61307507-61307526 | None:intergenic | 45.0% | |
TCTTATTGTCGAGCTCCTGT+TGG | + | chr2.4:61307437-61307456 | None:intergenic | 45.0% | |
TGGGGAAAATACTCACGATC+GGG | + | chr2.4:61306048-61306067 | None:intergenic | 45.0% | |
TTGCAGGTAATGTGCACTCT+AGG | - | chr2.4:61306308-61306327 | MS.gene02861:CDS | 45.0% | |
! | AATTGGATAAGCTTGGTGGC+AGG | - | chr2.4:61307784-61307803 | MS.gene02861:CDS | 45.0% |
! | CATAACTCTGAGGACACCTT+TGG | + | chr2.4:61306249-61306268 | None:intergenic | 45.0% |
! | TGAACGCTTTGTTGATGCTG+TGG | - | chr2.4:61306008-61306027 | MS.gene02861:CDS | 45.0% |
!! | AATCTGGTGTCATCGGTTCA+TGG | + | chr2.4:61307545-61307564 | None:intergenic | 45.0% |
!! | CAAAGGTGTCCTCAGAGTTA+TGG | - | chr2.4:61306247-61306266 | MS.gene02861:CDS | 45.0% |
!! | CAACCAGAATCTGGTGTCAT+CGG | + | chr2.4:61307552-61307571 | None:intergenic | 45.0% |
!! | TAGCAGCTTTTTCTGGGTCA+GGG | + | chr2.4:61307473-61307492 | None:intergenic | 45.0% |
!! | TTAGCAGCTTTTTCTGGGTC+AGG | + | chr2.4:61307474-61307493 | None:intergenic | 45.0% |
!! | TTTTTCCACCAACGGGTTTG+AGG | + | chr2.4:61306845-61306864 | None:intergenic | 45.0% |
AAGAGCAACAGCGACTCAGT+GGG | - | chr2.4:61307355-61307374 | MS.gene02861:CDS | 50.0% | |
AGACTGTTTCCTCCACTACC+AGG | + | chr2.4:61305931-61305950 | None:intergenic | 50.0% | |
CATGGTCAGCACATAGAGTC+TGG | - | chr2.4:61305889-61305908 | MS.gene02861:CDS | 50.0% | |
GAACCGATGACACCAGATTC+TGG | - | chr2.4:61307546-61307565 | MS.gene02861:intron | 50.0% | |
GGGGAAAATACTCACGATCG+GGG | + | chr2.4:61306047-61306066 | None:intergenic | 50.0% | |
GGTGCTTCCTCATCAGATAC+TGG | - | chr2.4:61307665-61307684 | MS.gene02861:CDS | 50.0% | |
GTCAGCACATAGAGTCTGGT+AGG | - | chr2.4:61305893-61305912 | MS.gene02861:CDS | 50.0% | |
GTTGATGCTGTGGCTCAACT+TGG | - | chr2.4:61306018-61306037 | MS.gene02861:CDS | 50.0% | |
TCCAGGAGATATGTCCCAAC+AGG | - | chr2.4:61307419-61307438 | MS.gene02861:intron | 50.0% | |
TCCTGTTGGGACATATCTCC+TGG | + | chr2.4:61307423-61307442 | None:intergenic | 50.0% | |
TCTCCTGCTGACAGTCCTAA+TGG | - | chr2.4:61307582-61307601 | MS.gene02861:intron | 50.0% | |
TGGGACATATCTCCTGGAGT+TGG | + | chr2.4:61307417-61307436 | None:intergenic | 50.0% | |
TTACCTGACTGCTCATCCGA+TGG | - | chr2.4:61306421-61306440 | MS.gene02861:intron | 50.0% | |
! | CCAGATTCTGGTTGCCAAGT+CGG | - | chr2.4:61307558-61307577 | MS.gene02861:intron | 50.0% |
!! | AGCAGCTTTTTCTGGGTCAG+GGG | + | chr2.4:61307472-61307491 | None:intergenic | 50.0% |
ACCTTTGGGTGTGGCACCTA+AGG | + | chr2.4:61306234-61306253 | None:intergenic | 55.0% | |
AGAGCAACAGCGACTCAGTG+GGG | - | chr2.4:61307356-61307375 | MS.gene02861:CDS | 55.0% | |
AGCGCTATGGATCCTGGTAG+TGG | - | chr2.4:61305916-61305935 | MS.gene02861:CDS | 55.0% | |
CAATGCCTCAAACCCGTTGG+TGG | - | chr2.4:61306837-61306856 | MS.gene02861:intron | 55.0% | |
CGGGTAAGGAAAACAGCGGT+TGG | + | chr2.4:61307717-61307736 | None:intergenic | 55.0% | |
GAAGAGCAACAGCGACTCAG+TGG | - | chr2.4:61307354-61307373 | MS.gene02861:CDS | 55.0% | |
GATGCTGTGGCTCAACTTGG+TGG | - | chr2.4:61306021-61306040 | MS.gene02861:CDS | 55.0% | |
GGGTGTGGCACCTAAGGAAA+AGG | + | chr2.4:61306228-61306247 | None:intergenic | 55.0% | |
GGTGTATCAGCACCAACTCC+AGG | - | chr2.4:61307402-61307421 | MS.gene02861:intron | 55.0% | |
GTACCATCGGATGAGCAGTC+AGG | + | chr2.4:61306427-61306446 | None:intergenic | 55.0% | |
TCGCCATTAGGACTGTCAGC+AGG | + | chr2.4:61307588-61307607 | None:intergenic | 55.0% | |
TCTGAGGACACCTTTGGGTG+TGG | + | chr2.4:61306243-61306262 | None:intergenic | 55.0% | |
TGTCAGCAGGAGAACCGACT+TGG | + | chr2.4:61307575-61307594 | None:intergenic | 55.0% | |
! | GCGGTTGGTTGCTGGTATGA+TGG | + | chr2.4:61307702-61307721 | None:intergenic | 55.0% |
! | GGAAAACAGCGGTTGGTTGC+TGG | + | chr2.4:61307710-61307729 | None:intergenic | 55.0% |
! | TCCTTAGGTGCCACACCCAA+AGG | - | chr2.4:61306230-61306249 | MS.gene02861:CDS | 55.0% |
! | TTTTCTGGGTCAGGGGTTGC+CGG | + | chr2.4:61307465-61307484 | None:intergenic | 55.0% |
!! | AGAGTCTGGTAGGAGCGCTA+TGG | - | chr2.4:61305903-61305922 | MS.gene02861:CDS | 55.0% |
!! | CCGACTTGGCAACCAGAATC+TGG | + | chr2.4:61307561-61307580 | None:intergenic | 55.0% |
!! | GCTATGGATCCTGGTAGTGG+AGG | - | chr2.4:61305919-61305938 | MS.gene02861:CDS | 55.0% |
!! | GGGGTTCTTTCAGAAGCACC+CGG | - | chr2.4:61307375-61307394 | MS.gene02861:CDS | 55.0% |
!! | TGGTGCTGATACACCAGAGC+CGG | + | chr2.4:61307397-61307416 | None:intergenic | 55.0% |
!! | CTTTCAGAAGCACCCGGCTC+TGG | - | chr2.4:61307381-61307400 | MS.gene02861:CDS | 60.0% |
!! | GGTAGGAGCGCTATGGATCC+TGG | - | chr2.4:61305910-61305929 | MS.gene02861:CDS | 60.0% |
!! | GGTGCTGATACACCAGAGCC+GGG | + | chr2.4:61307396-61307415 | None:intergenic | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 61305832 | 61307815 | 61305832 | ID=MS.gene02861 |
chr2.4 | mRNA | 61305832 | 61307815 | 61305832 | ID=MS.gene02861.t1;Parent=MS.gene02861 |
chr2.4 | exon | 61307596 | 61307815 | 61307596 | ID=MS.gene02861.t1.exon1;Parent=MS.gene02861.t1 |
chr2.4 | CDS | 61307596 | 61307815 | 61307596 | ID=cds.MS.gene02861.t1;Parent=MS.gene02861.t1 |
chr2.4 | exon | 61307334 | 61307410 | 61307334 | ID=MS.gene02861.t1.exon2;Parent=MS.gene02861.t1 |
chr2.4 | CDS | 61307334 | 61307410 | 61307334 | ID=cds.MS.gene02861.t1;Parent=MS.gene02861.t1 |
chr2.4 | exon | 61307205 | 61307247 | 61307205 | ID=MS.gene02861.t1.exon3;Parent=MS.gene02861.t1 |
chr2.4 | CDS | 61307205 | 61307247 | 61307205 | ID=cds.MS.gene02861.t1;Parent=MS.gene02861.t1 |
chr2.4 | exon | 61307005 | 61307065 | 61307005 | ID=MS.gene02861.t1.exon4;Parent=MS.gene02861.t1 |
chr2.4 | CDS | 61307005 | 61307065 | 61307005 | ID=cds.MS.gene02861.t1;Parent=MS.gene02861.t1 |
chr2.4 | exon | 61306622 | 61306691 | 61306622 | ID=MS.gene02861.t1.exon5;Parent=MS.gene02861.t1 |
chr2.4 | CDS | 61306622 | 61306691 | 61306622 | ID=cds.MS.gene02861.t1;Parent=MS.gene02861.t1 |
chr2.4 | exon | 61305832 | 61306353 | 61305832 | ID=MS.gene02861.t1.exon6;Parent=MS.gene02861.t1 |
chr2.4 | CDS | 61305832 | 61306353 | 61305832 | ID=cds.MS.gene02861.t1;Parent=MS.gene02861.t1 |
Gene Sequence |
Protein sequence |