AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028659

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028659.t1 MTR_2g095520 96.786 280 6 2 14 290 41 320 0.0 551
MS.gene028659.t1 MTR_4g057635 48.311 296 120 10 14 290 41 322 4.04e-64 204
MS.gene028659.t1 MTR_7g102110 80.000 80 16 0 14 93 41 120 4.63e-43 148
MS.gene028659.t1 MTR_5g014990 83.333 78 13 0 14 91 41 118 1.81e-42 148
MS.gene028659.t1 MTR_1g017140 82.051 78 14 0 14 91 41 118 3.81e-42 148
MS.gene028659.t1 MTR_3g103570 80.769 78 15 0 14 91 41 118 3.64e-41 145
MS.gene028659.t1 MTR_1g017000 63.208 106 31 2 14 111 41 146 1.13e-39 139
MS.gene028659.t1 MTR_4g097570 86.765 68 9 0 16 83 44 111 4.95e-39 139
MS.gene028659.t1 MTR_4g097570 84.286 70 11 0 14 83 41 110 1.72e-38 137
MS.gene028659.t1 MTR_6g090405 55.738 122 38 2 19 138 46 153 5.15e-38 135
MS.gene028659.t1 MTR_4g128670 83.099 71 12 0 14 84 41 111 1.16e-37 136
MS.gene028659.t1 MTR_7g076740 53.846 104 43 2 12 113 39 139 1.05e-34 127
MS.gene028659.t1 MTR_3g461490 68.293 82 24 1 19 98 45 126 1.23e-34 128
MS.gene028659.t1 MTR_4g478180 58.333 96 38 1 12 105 39 134 5.00e-34 127
MS.gene028659.t1 MTR_1g100653 59.783 92 37 0 12 103 38 129 8.80e-34 125
MS.gene028659.t1 MTR_8g031360 55.882 102 40 2 12 111 40 138 1.90e-33 124
MS.gene028659.t1 MTR_5g029840 59.140 93 36 1 14 104 40 132 1.92e-33 125
MS.gene028659.t1 MTR_3g097450 49.138 116 55 2 12 123 38 153 3.63e-33 123
MS.gene028659.t1 MTR_0251s0050 57.955 88 37 0 3 90 30 117 6.43e-33 122
MS.gene028659.t1 MTR_3g074520 49.153 118 52 2 12 121 38 155 9.12e-33 123
MS.gene028659.t1 MTR_6g009430 64.706 85 28 1 19 101 45 129 1.18e-32 123
MS.gene028659.t1 MTR_4g073420 41.667 144 81 2 12 153 38 180 2.28e-32 121
MS.gene028659.t1 MTR_4g125520 58.696 92 38 0 12 103 38 129 3.03e-32 121
MS.gene028659.t1 MTR_5g007370 56.250 96 40 1 12 105 38 133 3.07e-32 121
MS.gene028659.t1 MTR_1g112760 56.180 89 37 1 16 102 43 131 5.91e-32 118
MS.gene028659.t1 MTR_4g082290 49.231 130 59 2 5 132 31 155 7.60e-32 122
MS.gene028659.t1 MTR_3g077110 57.303 89 36 1 16 102 42 130 1.77e-31 120
MS.gene028659.t1 MTR_0008s0390 46.667 120 56 2 12 130 39 151 2.04e-31 118
MS.gene028659.t1 MTR_4g100720 55.446 101 33 1 19 119 46 134 3.41e-31 115
MS.gene028659.t1 MTR_0008s0470 52.222 90 43 0 3 92 30 119 4.37e-31 117
MS.gene028659.t1 MTR_4g082230 48.485 132 61 2 3 132 29 155 5.28e-31 120
MS.gene028659.t1 MTR_7g117730 62.963 81 30 0 12 92 38 118 6.11e-31 116
MS.gene028659.t1 MTR_4g091490 52.830 106 48 1 7 110 34 139 6.76e-31 119
MS.gene028659.t1 MTR_2g064160 32.852 277 148 10 16 262 41 309 9.00e-31 117
MS.gene028659.t1 MTR_8g095390 57.303 89 36 1 12 98 38 126 9.07e-31 117
MS.gene028659.t1 MTR_2g089450 56.180 89 39 0 3 91 29 117 1.26e-30 115
MS.gene028659.t1 MTR_1g062940 56.818 88 38 0 3 90 23 110 1.47e-30 114
MS.gene028659.t1 MTR_6g012690 51.282 117 55 1 5 119 31 147 1.56e-30 117
MS.gene028659.t1 MTR_1g076150 63.291 79 29 0 12 90 38 116 1.73e-30 115
MS.gene028659.t1 MTR_7g011170 54.206 107 43 2 3 103 29 135 2.31e-30 116
MS.gene028659.t1 MTR_1g043050 61.728 81 31 0 12 92 38 118 2.53e-30 115
MS.gene028659.t1 MTR_4g105130 49.138 116 56 2 19 131 45 160 2.57e-30 117
MS.gene028659.t1 MTR_1g085040 58.621 87 34 1 14 98 40 126 2.75e-30 117
MS.gene028659.t1 MTR_2g011660 55.319 94 40 1 7 98 34 127 3.20e-30 116
MS.gene028659.t1 MTR_2g089620 55.208 96 41 1 12 105 38 133 3.21e-30 116
MS.gene028659.t1 MTR_5g079670 51.000 100 45 2 14 109 39 138 4.38e-30 113
MS.gene028659.t1 MTR_4g065017 60.000 80 32 0 14 93 45 124 4.63e-30 116
MS.gene028659.t1 MTR_2g097910 60.000 80 32 0 14 93 48 127 5.31e-30 115
MS.gene028659.t1 MTR_3g052450 48.214 112 51 2 18 126 72 179 5.48e-30 118
MS.gene028659.t1 MTR_4g102380 55.056 89 38 1 12 98 38 126 5.50e-30 114
MS.gene028659.t1 MTR_3g083540 55.056 89 38 1 12 98 67 155 6.37e-30 115
MS.gene028659.t1 MTR_1g085640 69.444 72 22 0 19 90 45 116 6.48e-30 116
MS.gene028659.t1 MTR_8g027345 63.291 79 29 0 12 90 38 116 8.73e-30 114
MS.gene028659.t1 MTR_7g110830 69.444 72 22 0 19 90 45 116 1.07e-29 115
MS.gene028659.t1 MTR_7g115650 60.759 79 31 0 12 90 38 116 1.12e-29 112
MS.gene028659.t1 MTR_1g043080 58.750 80 33 0 12 91 38 117 1.20e-29 113
MS.gene028659.t1 MTR_8g042410 61.039 77 30 0 19 95 70 146 1.36e-29 117
MS.gene028659.t1 MTR_2g089420 55.000 80 36 0 12 91 37 116 1.97e-29 116
MS.gene028659.t1 MTR_5g078140 53.261 92 41 1 12 101 38 129 2.21e-29 114
MS.gene028659.t1 MTR_8g098860 53.571 84 39 0 7 90 33 116 3.34e-29 113
MS.gene028659.t1 MTR_0063s0090 59.211 76 31 0 12 87 38 113 4.02e-29 110
MS.gene028659.t1 MTR_3g052430 61.039 77 30 0 19 95 74 150 5.16e-29 115
MS.gene028659.t1 MTR_3g065440 55.056 89 38 1 12 98 38 126 5.21e-29 112
MS.gene028659.t1 MTR_0197s0010 64.865 74 26 0 17 90 32 105 6.61e-29 110
MS.gene028659.t1 MTR_3g028740 61.039 77 30 0 14 90 50 126 7.51e-29 113
MS.gene028659.t1 MTR_7g096930 58.333 84 35 0 7 90 33 116 7.79e-29 111
MS.gene028659.t1 MTR_4g485530 51.042 96 43 2 14 105 40 135 1.56e-28 108
MS.gene028659.t1 MTR_8g020490 60.759 79 31 0 12 90 34 112 1.93e-28 110
MS.gene028659.t1 MTR_8g017500 39.241 158 77 5 16 171 42 182 3.03e-28 111
MS.gene028659.t1 MTR_2g099740 36.000 175 96 4 16 180 42 210 4.09e-28 112
MS.gene028659.t1 MTR_8g017440 41.259 143 68 4 14 156 40 166 4.75e-28 110
MS.gene028659.t1 MTR_0008s0280 53.659 82 38 0 7 88 33 114 5.29e-28 108
MS.gene028659.t1 MTR_6g055910 54.082 98 45 0 12 109 11 108 5.31e-28 108
MS.gene028659.t1 MTR_3g011610 58.442 77 32 0 19 95 70 146 5.99e-28 112
MS.gene028659.t1 MTR_8g017340 58.974 78 32 0 14 91 41 118 6.56e-28 112
MS.gene028659.t1 MTR_0140s0030 65.278 72 25 0 19 90 46 117 7.22e-28 110
MS.gene028659.t1 MTR_0489s0020 65.278 72 25 0 19 90 46 117 7.22e-28 110
MS.gene028659.t1 MTR_1g073170 63.514 74 27 0 16 89 50 123 8.25e-28 108
MS.gene028659.t1 MTR_1g045610 59.494 79 32 0 14 92 49 127 8.52e-28 108
MS.gene028659.t1 MTR_3g039990 64.000 75 27 0 19 93 46 120 9.30e-28 109
MS.gene028659.t1 MTR_2g034790 53.125 96 44 1 14 109 40 134 9.51e-28 109
MS.gene028659.t1 MTR_8g017350 57.692 78 33 0 14 91 41 118 1.68e-27 112
MS.gene028659.t1 MTR_5g010020 55.128 78 35 0 7 84 33 110 1.69e-27 109
MS.gene028659.t1 MTR_5g042030 60.494 81 30 1 20 98 41 121 1.70e-27 108
MS.gene028659.t1 MTR_4g121460 53.409 88 41 0 3 90 29 116 2.25e-27 108
MS.gene028659.t1 MTR_8g017390 57.895 76 32 0 16 91 43 118 2.34e-27 110
MS.gene028659.t1 MTR_8g017540 45.536 112 53 2 16 127 88 191 3.56e-27 109
MS.gene028659.t1 MTR_7g010210 65.278 72 25 0 19 90 45 116 4.46e-27 107
MS.gene028659.t1 MTR_7g035075 57.143 77 33 0 14 90 42 118 5.04e-27 105
MS.gene028659.t1 MTR_7g010210 65.278 72 25 0 19 90 45 116 6.07e-27 106
MS.gene028659.t1 MTR_7g111290 69.231 65 20 0 19 83 3 67 6.79e-27 107
MS.gene028659.t1 MTR_7g111290 64.286 70 25 0 14 83 40 109 6.85e-27 108
MS.gene028659.t1 MTR_2g096380 53.659 82 38 0 8 89 9 90 1.08e-26 104
MS.gene028659.t1 MTR_1g100667 57.895 76 32 0 19 94 46 121 1.13e-26 105
MS.gene028659.t1 MTR_6g055910 54.945 91 41 0 19 109 47 137 1.36e-26 105
MS.gene028659.t1 MTR_1g110460 36.723 177 90 4 14 174 54 224 1.62e-26 106
MS.gene028659.t1 MTR_6g006030 55.844 77 34 0 14 90 42 118 1.74e-26 103
MS.gene028659.t1 MTR_4g063100 56.164 73 32 0 17 89 9 81 2.71e-26 103
MS.gene028659.t1 MTR_3g045430 53.125 96 43 1 5 98 32 127 3.19e-26 105
MS.gene028659.t1 MTR_4g063100 53.947 76 35 0 14 89 35 110 4.03e-26 103
MS.gene028659.t1 MTR_6g012180 68.182 66 21 0 19 84 45 110 4.11e-26 105
MS.gene028659.t1 MTR_1g086530 56.250 80 35 0 14 93 61 140 6.17e-26 103
MS.gene028659.t1 MTR_7g087130 65.278 72 25 0 19 90 45 116 6.98e-26 105
MS.gene028659.t1 MTR_5g079290 60.274 73 29 0 19 91 50 122 1.01e-25 102
MS.gene028659.t1 MTR_2g096380 51.899 79 38 0 14 92 34 112 1.56e-25 101
MS.gene028659.t1 MTR_2g088170 61.039 77 30 0 19 95 62 138 9.33e-25 103
MS.gene028659.t1 MTR_5g078910 58.904 73 30 0 19 91 40 112 9.75e-25 101
MS.gene028659.t1 MTR_2g067420 57.534 73 31 0 12 84 40 112 9.98e-25 101
MS.gene028659.t1 MTR_1g021230 52.439 82 39 0 14 95 85 166 1.03e-24 103
MS.gene028659.t1 MTR_5g079220 60.274 73 29 0 19 91 54 126 1.03e-24 100
MS.gene028659.t1 MTR_4g128190 52.326 86 38 2 13 95 25 110 1.32e-24 99.4
MS.gene028659.t1 MTR_8g060940 63.235 68 25 0 19 86 40 107 1.94e-24 99.0
MS.gene028659.t1 MTR_1g086510 57.333 75 32 0 19 93 54 128 3.85e-24 99.0
MS.gene028659.t1 MTR_7g017260 58.904 73 30 0 19 91 60 132 6.17e-24 98.6
MS.gene028659.t1 MTR_5g078950 62.319 69 26 0 19 87 40 108 7.66e-24 97.8
MS.gene028659.t1 MTR_0001s0360 59.722 72 29 0 20 91 41 112 8.90e-24 97.4
MS.gene028659.t1 MTR_5g079120 57.534 73 31 0 19 91 94 166 1.23e-23 98.2
MS.gene028659.t1 MTR_5g078800 58.904 73 30 0 19 91 40 112 1.64e-23 97.1
MS.gene028659.t1 MTR_1g083630 45.833 96 52 0 20 115 46 141 1.77e-23 100
MS.gene028659.t1 MTR_5g078860 57.534 73 31 0 19 91 40 112 1.87e-23 97.8
MS.gene028659.t1 MTR_7g109320 32.710 214 129 4 12 224 38 237 1.96e-22 95.9
MS.gene028659.t1 MTR_0247s0040 59.420 69 28 0 19 87 40 108 2.27e-22 92.0
MS.gene028659.t1 MTR_8g006470 55.263 76 32 2 20 94 44 118 2.42e-22 94.4
MS.gene028659.t1 MTR_5g078930 60.563 71 28 0 19 89 42 112 3.24e-22 92.4
MS.gene028659.t1 MTR_5g062790 54.930 71 31 1 19 88 42 112 4.41e-22 94.0
MS.gene028659.t1 MTR_5g488170 55.263 76 32 2 19 93 45 119 5.95e-22 92.4
MS.gene028659.t1 MTR_5g088080 39.669 121 58 3 19 138 45 151 6.36e-22 92.8
MS.gene028659.t1 MTR_5g088150 39.669 121 58 3 19 138 45 151 6.36e-22 92.8
MS.gene028659.t1 MTR_5g488210 39.669 121 58 3 19 138 45 151 6.36e-22 92.8
MS.gene028659.t1 MTR_0193s0090 54.795 73 33 0 19 91 40 112 7.23e-22 91.3
MS.gene028659.t1 MTR_4g019370 48.352 91 36 1 10 89 48 138 7.54e-22 94.0
MS.gene028659.t1 MTR_5g088640 39.669 121 58 3 19 138 45 151 7.82e-22 92.8
MS.gene028659.t1 MTR_2g033170 56.250 80 35 0 14 93 52 131 7.95e-22 93.6
MS.gene028659.t1 MTR_4g029540 54.286 70 31 1 20 88 44 113 1.16e-20 90.1
MS.gene028659.t1 MTR_4g094982 57.353 68 29 0 22 89 38 105 1.40e-20 89.4
MS.gene028659.t1 MTR_5g070020 36.709 158 80 5 11 156 133 282 1.85e-20 90.1
MS.gene028659.t1 MTR_3g101290 54.412 68 31 0 22 89 70 137 1.89e-20 87.8
MS.gene028659.t1 MTR_5g016510 45.263 95 41 1 11 94 16 110 4.01e-20 88.6
MS.gene028659.t1 MTR_4g123040 56.000 75 33 0 14 88 52 126 2.79e-19 86.3
MS.gene028659.t1 MTR_3g463400 43.333 90 40 1 11 89 144 233 5.13e-19 87.0
MS.gene028659.t1 MTR_5g088610 53.521 71 32 1 19 88 42 112 5.76e-19 85.9
MS.gene028659.t1 MTR_4g105660 41.758 91 42 1 10 89 190 280 6.30e-19 86.7
MS.gene028659.t1 MTR_3g077650 33.094 139 88 3 22 156 214 351 9.72e-18 83.2
MS.gene028659.t1 MTR_6g015455 40.833 120 55 3 11 116 16 133 1.02e-17 84.0
MS.gene028659.t1 MTR_6g074860 33.824 136 75 4 22 150 37 164 1.92e-17 80.1
MS.gene028659.t1 MTR_7g451170 41.111 90 42 1 11 89 202 291 1.95e-17 82.0
MS.gene028659.t1 MTR_5g082910 53.846 65 30 0 22 86 52 116 3.32e-17 80.1
MS.gene028659.t1 MTR_1g057980 43.590 78 43 1 7 84 99 175 9.15e-17 79.0
MS.gene028659.t1 MTR_5g049190 50.820 61 30 0 22 82 52 112 1.02e-16 78.2
MS.gene028659.t1 MTR_7g037260 40.659 91 43 1 10 89 155 245 1.14e-16 79.3
MS.gene028659.t1 MTR_4g088015 40.449 89 42 1 11 88 232 320 1.36e-16 79.7
MS.gene028659.t1 MTR_7g035350 41.250 80 47 0 22 101 258 337 2.23e-16 79.3
MS.gene028659.t1 MTR_4g082040 41.111 90 42 1 11 89 116 205 3.56e-16 78.6
MS.gene028659.t1 MTR_7g061330 50.725 69 34 0 22 90 146 214 1.33e-15 77.0
MS.gene028659.t1 MTR_7g461410 50.725 69 34 0 22 90 146 214 1.33e-15 77.0
MS.gene028659.t1 MTR_7g061330 50.725 69 34 0 22 90 110 178 1.94e-15 76.6
MS.gene028659.t1 MTR_7g450950 44.444 63 35 0 22 84 190 252 2.02e-15 75.9
MS.gene028659.t1 MTR_5g041570 38.889 90 44 1 11 89 145 234 2.55e-15 75.9
MS.gene028659.t1 MTR_5g010650 46.429 84 34 1 11 83 121 204 3.96e-15 75.5
MS.gene028659.t1 MTR_1g085880 47.436 78 40 1 12 88 38 115 6.32e-15 72.0
MS.gene028659.t1 MTR_6g027340 42.466 73 42 0 22 94 49 121 1.31e-14 71.6
MS.gene028659.t1 MTR_1g085770 47.436 78 40 1 12 88 38 115 1.36e-14 73.2
MS.gene028659.t1 MTR_3g110028 45.205 73 40 0 22 94 118 190 2.41e-14 73.6
MS.gene028659.t1 MTR_6g027360 42.466 73 42 0 22 94 111 183 2.90e-14 72.0
MS.gene028659.t1 MTR_7g061550 46.154 65 35 0 20 84 41 105 4.02e-14 72.0
MS.gene028659.t1 MTR_5g007300 56.863 51 22 0 12 62 90 140 1.40e-13 67.0
MS.gene028659.t1 MTR_1g026870 43.836 73 41 0 22 94 118 190 1.62e-13 71.2
MS.gene028659.t1 MTR_7g086960 45.588 68 37 0 22 89 122 189 3.24e-13 69.3
MS.gene028659.t1 MTR_7g037130 37.383 107 53 2 10 102 155 261 4.22e-13 68.9
MS.gene028659.t1 MTR_6g027370 43.836 73 41 0 22 94 132 204 6.32e-13 68.6
MS.gene028659.t1 MTR_6g055910 52.381 63 29 1 47 109 6 67 2.75e-12 65.1
MS.gene028659.t1 MTR_3g089045 44.118 68 38 0 22 89 49 116 2.85e-12 66.2
MS.gene028659.t1 MTR_4g063100 55.814 43 19 0 47 89 4 46 3.72e-11 61.6
MS.gene028659.t1 MTR_2g096380 53.333 45 21 0 48 92 5 49 6.05e-11 60.5
MS.gene028659.t1 MTR_5g038910 41.176 68 40 0 22 89 59 126 8.36e-11 62.8
MS.gene028659.t1 MTR_4g046737 48.837 43 22 0 43 85 27 69 9.88e-11 57.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028659.t1 AT5G65790 84.810 79 12 0 14 92 41 119 2.00e-43 152
MS.gene028659.t1 AT5G57620 84.615 78 12 0 14 91 41 118 1.66e-42 149
MS.gene028659.t1 AT3G49690 82.278 79 14 0 14 92 41 119 1.90e-42 148
MS.gene028659.t1 AT5G23000 50.000 178 62 5 19 170 46 222 6.45e-42 147
MS.gene028659.t1 AT4G37780 79.487 78 16 0 14 91 41 118 1.96e-41 145
MS.gene028659.t1 AT5G56110 68.293 82 24 1 19 98 45 126 4.98e-35 129
MS.gene028659.t1 AT3G61250 52.294 109 50 1 12 118 38 146 2.04e-34 127
MS.gene028659.t1 AT1G35515 52.941 102 46 1 12 111 38 139 3.90e-34 124
MS.gene028659.t1 AT4G38620 44.755 143 70 4 12 146 38 179 4.31e-34 125
MS.gene028659.t1 AT4G09460 55.000 100 43 1 12 109 38 137 1.69e-33 122
MS.gene028659.t1 AT1G22640 54.000 100 44 1 12 109 38 137 4.47e-33 122
MS.gene028659.t1 AT5G07700 45.517 145 68 3 19 161 45 180 1.02e-32 123
MS.gene028659.t1 AT5G07700 45.517 145 68 3 19 161 45 180 1.02e-32 123
MS.gene028659.t1 AT2G16720 45.968 124 60 2 12 133 38 156 1.16e-32 121
MS.gene028659.t1 AT4G12350 51.887 106 49 1 7 110 33 138 1.21e-32 122
MS.gene028659.t1 AT5G65230 62.069 87 31 1 14 98 40 126 1.29e-32 122
MS.gene028659.t1 AT5G61420 47.826 138 60 3 12 147 38 165 2.78e-32 122
MS.gene028659.t1 AT5G62320 58.427 89 35 1 12 98 46 134 3.41e-32 119
MS.gene028659.t1 AT4G22680 41.549 142 58 3 7 146 33 151 3.66e-32 120
MS.gene028659.t1 AT4G17785 56.250 96 40 1 5 98 32 127 4.63e-32 122
MS.gene028659.t1 AT4G17785 56.250 96 40 1 5 98 32 127 4.86e-32 122
MS.gene028659.t1 AT5G10280 59.551 89 34 1 12 98 38 126 6.29e-32 121
MS.gene028659.t1 AT5G54230 51.695 118 55 1 12 127 38 155 8.38e-32 120
MS.gene028659.t1 AT5G26660 55.556 99 39 2 9 102 1 99 8.89e-32 120
MS.gene028659.t1 AT4G21440 53.774 106 47 1 7 110 33 138 1.25e-31 120
MS.gene028659.t1 AT1G09540 41.892 148 74 2 14 159 40 177 2.89e-31 120
MS.gene028659.t1 AT4G05100 56.383 94 39 1 7 98 34 127 6.50e-31 118
MS.gene028659.t1 AT1G57560 64.103 78 28 0 14 91 40 117 6.56e-31 117
MS.gene028659.t1 AT4G01680 63.855 83 29 1 8 90 47 128 6.90e-31 118
MS.gene028659.t1 AT5G16770 55.208 96 41 1 12 105 38 133 7.05e-31 118
MS.gene028659.t1 AT5G16770 55.208 96 41 1 12 105 38 133 7.05e-31 118
MS.gene028659.t1 AT1G57560 64.103 78 28 0 14 91 40 117 7.97e-31 117
MS.gene028659.t1 AT5G16770 55.208 96 41 1 12 105 38 133 1.02e-30 117
MS.gene028659.t1 AT5G16770 55.208 96 41 1 12 105 38 133 1.02e-30 117
MS.gene028659.t1 AT5G55020 58.824 85 35 0 19 103 59 143 1.05e-30 120
MS.gene028659.t1 AT4G34990 55.435 92 39 1 12 101 38 129 1.15e-30 116
MS.gene028659.t1 AT3G01140 42.581 155 85 2 3 155 29 181 1.44e-30 117
MS.gene028659.t1 AT5G07690 32.982 285 160 8 12 282 38 305 1.54e-30 117
MS.gene028659.t1 AT1G18570 56.522 92 38 1 12 101 39 130 3.00e-30 117
MS.gene028659.t1 AT3G02940 52.475 101 46 1 7 105 33 133 3.29e-30 115
MS.gene028659.t1 AT4G01680 69.444 72 22 0 19 90 45 116 4.10e-30 114
MS.gene028659.t1 AT3G27920 58.228 79 33 0 13 91 41 119 4.40e-30 113
MS.gene028659.t1 AT5G26660 56.180 89 37 1 16 102 42 130 4.44e-30 116
MS.gene028659.t1 AT3G02940 52.475 101 46 1 7 105 33 133 4.74e-30 115
MS.gene028659.t1 AT3G02940 52.475 101 46 1 7 105 33 133 4.74e-30 115
MS.gene028659.t1 AT3G13540 49.550 111 46 2 1 101 30 140 4.83e-30 114
MS.gene028659.t1 AT3G01140 42.581 155 85 2 3 155 72 224 5.37e-30 117
MS.gene028659.t1 AT3G23250 56.180 89 39 0 12 100 38 126 6.48e-30 114
MS.gene028659.t1 AT4G28110 60.000 80 32 0 12 91 38 117 6.76e-30 114
MS.gene028659.t1 AT1G06180 50.495 101 50 0 12 112 38 138 7.71e-30 113
MS.gene028659.t1 AT5G15310 55.102 98 42 1 3 98 29 126 8.19e-30 115
MS.gene028659.t1 AT5G60890 69.444 72 22 0 19 90 45 116 8.54e-30 114
MS.gene028659.t1 AT5G14750 57.692 78 33 0 13 90 43 120 8.82e-30 112
MS.gene028659.t1 AT5G15310 56.250 96 40 1 5 98 31 126 9.11e-30 113
MS.gene028659.t1 AT4G01680 69.444 72 22 0 19 90 45 116 1.01e-29 115
MS.gene028659.t1 AT5G15310 55.102 98 42 1 3 98 29 126 1.10e-29 114
MS.gene028659.t1 AT5G40330 57.692 78 33 0 13 90 39 116 1.32e-29 112
MS.gene028659.t1 AT1G63910 53.261 92 41 1 7 98 33 122 1.58e-29 115
MS.gene028659.t1 AT4G26930 40.556 180 71 5 20 171 53 224 2.09e-29 115
MS.gene028659.t1 AT3G12720 52.273 88 40 1 14 99 50 137 3.05e-29 113
MS.gene028659.t1 AT3G47600 65.789 76 26 0 18 93 38 113 3.92e-29 113
MS.gene028659.t1 AT2G31180 60.759 79 31 0 12 90 38 116 5.55e-29 111
MS.gene028659.t1 AT2G32460 59.740 77 31 0 19 95 51 127 7.61e-29 115
MS.gene028659.t1 AT1G34670 57.303 89 36 1 12 98 38 126 8.02e-29 113
MS.gene028659.t1 AT1G66230 53.261 92 41 1 12 101 38 129 8.15e-29 111
MS.gene028659.t1 AT2G32460 59.740 77 31 0 19 95 39 115 9.09e-29 114
MS.gene028659.t1 AT1G18710 44.643 112 60 1 5 114 31 142 9.53e-29 111
MS.gene028659.t1 AT5G16600 52.577 97 44 1 7 101 33 129 9.62e-29 112
MS.gene028659.t1 AT3G62610 35.751 193 114 3 12 198 38 226 1.04e-28 112
MS.gene028659.t1 AT5G62470 65.333 75 26 0 19 93 45 119 1.26e-28 112
MS.gene028659.t1 AT5G06100 61.842 76 29 0 20 95 66 141 1.44e-28 114
MS.gene028659.t1 AT1G79180 55.056 89 40 0 3 91 31 119 1.49e-28 111
MS.gene028659.t1 AT5G35550 61.039 77 30 0 14 90 45 121 1.49e-28 110
MS.gene028659.t1 AT3G13890 61.644 73 28 0 19 91 45 117 1.57e-28 112
MS.gene028659.t1 AT3G47600 65.333 75 26 0 19 93 45 119 1.80e-28 112
MS.gene028659.t1 AT1G16490 59.494 79 32 0 12 90 40 118 1.90e-28 110
MS.gene028659.t1 AT5G12870 56.250 80 35 0 14 93 46 125 1.99e-28 110
MS.gene028659.t1 AT3G27810 49.558 113 48 2 14 126 48 151 2.83e-28 108
MS.gene028659.t1 AT3G27810 50.459 109 45 2 18 126 3 102 2.88e-28 107
MS.gene028659.t1 AT5G06100 61.842 76 29 0 20 95 66 141 3.01e-28 114
MS.gene028659.t1 AT5G06100 61.842 76 29 0 20 95 66 141 3.01e-28 114
MS.gene028659.t1 AT5G06100 61.842 76 29 0 20 95 66 141 3.01e-28 114
MS.gene028659.t1 AT5G06100 61.842 76 29 0 20 95 66 141 3.01e-28 114
MS.gene028659.t1 AT1G79180 65.278 72 25 0 19 90 80 151 4.94e-28 110
MS.gene028659.t1 AT2G47460 54.217 83 38 0 12 94 38 120 5.11e-28 111
MS.gene028659.t1 AT5G14750 62.319 69 26 0 22 90 18 86 5.64e-28 106
MS.gene028659.t1 AT5G14340 54.737 95 39 3 7 98 45 138 6.53e-28 108
MS.gene028659.t1 AT3G28910 62.500 80 30 0 19 98 45 124 8.56e-28 109
MS.gene028659.t1 AT3G01530 54.545 77 35 0 14 90 53 129 9.38e-28 107
MS.gene028659.t1 AT1G74430 53.608 97 40 2 14 108 40 133 9.81e-28 108
MS.gene028659.t1 AT3G08500 61.039 77 30 0 14 90 58 134 1.33e-27 109
MS.gene028659.t1 AT3G11440 57.895 76 32 0 20 95 75 150 1.72e-27 111
MS.gene028659.t1 AT3G13890 61.111 72 28 0 20 91 55 126 1.78e-27 109
MS.gene028659.t1 AT1G74080 58.511 94 35 3 19 109 45 137 1.89e-27 108
MS.gene028659.t1 AT5G35550 62.500 72 27 0 19 90 47 118 2.33e-27 107
MS.gene028659.t1 AT1G56160 55.952 84 37 0 7 90 35 118 2.66e-27 107
MS.gene028659.t1 AT3G11440 57.895 76 32 0 20 95 75 150 3.43e-27 110
MS.gene028659.t1 AT3G11440 57.895 76 32 0 20 95 75 150 3.43e-27 110
MS.gene028659.t1 AT3G11440 57.895 76 32 0 20 95 75 150 3.43e-27 110
MS.gene028659.t1 AT1G74650 65.753 73 25 0 19 91 45 117 3.85e-27 108
MS.gene028659.t1 AT3G28470 47.059 119 60 2 14 129 40 158 5.38e-27 107
MS.gene028659.t1 AT3G12820 57.500 80 34 0 12 91 40 119 5.43e-27 105
MS.gene028659.t1 AT3G24310 60.526 76 30 0 14 89 46 121 5.45e-27 106
MS.gene028659.t1 AT5G52600 60.526 76 30 0 14 89 40 115 6.29e-27 104
MS.gene028659.t1 AT5G40350 58.108 74 31 0 18 91 4 77 6.94e-27 103
MS.gene028659.t1 AT5G40350 56.410 78 34 0 14 91 45 122 9.56e-27 104
MS.gene028659.t1 AT3G53200 45.082 122 61 3 14 135 5 120 1.51e-26 103
MS.gene028659.t1 AT5G62470 63.889 72 26 0 22 93 47 118 2.78e-26 106
MS.gene028659.t1 AT3G53200 44.262 122 63 2 14 135 37 153 3.00e-26 103
MS.gene028659.t1 AT5G59780 55.263 76 34 0 14 89 36 111 3.75e-26 103
MS.gene028659.t1 AT4G13480 60.811 74 29 0 16 89 36 109 4.39e-26 103
MS.gene028659.t1 AT5G49330 38.889 144 80 2 12 147 38 181 4.43e-26 105
MS.gene028659.t1 AT3G46130 55.263 76 34 0 14 89 37 112 5.30e-26 103
MS.gene028659.t1 AT5G52260 58.750 80 33 0 17 96 43 122 5.66e-26 103
MS.gene028659.t1 AT1G08810 40.252 159 87 3 19 172 45 200 6.06e-26 103
MS.gene028659.t1 AT5G59780 58.333 72 30 0 18 89 19 90 1.09e-25 101
MS.gene028659.t1 AT3G46130 54.762 84 37 1 6 89 8 90 1.21e-25 102
MS.gene028659.t1 AT2G26960 57.143 70 30 0 19 88 53 122 1.42e-25 105
MS.gene028659.t1 AT3G12820 61.429 70 27 0 22 91 2 71 1.83e-25 100
MS.gene028659.t1 AT3G46130 59.155 71 29 0 19 89 10 80 2.09e-25 101
MS.gene028659.t1 AT1G66380 59.211 76 31 0 14 89 3 78 2.64e-25 97.4
MS.gene028659.t1 AT1G25340 45.133 113 59 2 14 124 46 157 3.44e-25 102
MS.gene028659.t1 AT1G48000 61.333 75 29 0 14 88 60 134 3.60e-25 100
MS.gene028659.t1 AT2G47190 55.000 80 36 0 14 93 48 127 1.04e-24 100
MS.gene028659.t1 AT1G66370 60.563 71 28 0 19 89 41 111 2.03e-24 99.0
MS.gene028659.t1 AT1G68320 52.500 80 38 0 14 93 47 126 2.16e-24 100
MS.gene028659.t1 AT4G25560 58.904 73 30 0 19 91 43 115 2.18e-24 99.8
MS.gene028659.t1 AT1G66380 63.380 71 26 0 19 89 41 111 3.90e-24 95.5
MS.gene028659.t1 AT3G30210 56.000 75 33 0 14 88 55 129 1.08e-23 97.8
MS.gene028659.t1 AT1G66390 61.972 71 27 0 19 89 41 111 5.22e-23 95.5
MS.gene028659.t1 AT3G48920 57.143 70 30 0 19 88 51 120 6.42e-23 95.5
MS.gene028659.t1 AT1G56650 61.972 71 27 0 19 89 41 111 1.04e-22 94.7
MS.gene028659.t1 AT3G55730 50.526 95 36 1 10 93 66 160 1.41e-22 96.7
MS.gene028659.t1 AT1G25340 45.631 103 53 2 24 124 51 152 3.86e-22 93.6
MS.gene028659.t1 AT1G25340 45.631 103 53 2 24 124 51 152 4.34e-22 94.0
MS.gene028659.t1 AT1G22640 50.000 80 38 1 32 109 1 80 4.81e-22 91.7
MS.gene028659.t1 AT3G06490 56.250 80 35 0 14 93 47 126 1.43e-21 92.8
MS.gene028659.t1 AT3G60460 52.632 76 34 2 20 94 45 119 2.10e-21 92.0
MS.gene028659.t1 AT2G39880 39.535 129 55 3 11 122 61 183 6.60e-21 91.7
MS.gene028659.t1 AT1G18960 47.436 78 39 1 16 93 37 112 1.11e-20 90.1
MS.gene028659.t1 AT1G71030 51.316 76 35 1 25 98 5 80 1.16e-20 87.4
MS.gene028659.t1 AT5G49620 55.000 80 36 0 14 93 54 133 1.24e-20 90.1
MS.gene028659.t1 AT1G71030 51.316 76 35 1 25 98 19 94 1.45e-20 87.4
MS.gene028659.t1 AT2G26950 46.250 80 40 1 19 95 49 128 4.01e-20 89.7
MS.gene028659.t1 AT3G50060 46.667 90 37 1 11 89 17 106 4.90e-20 88.2
MS.gene028659.t1 AT3G09230 43.158 95 43 1 10 93 65 159 6.32e-20 89.4
MS.gene028659.t1 AT3G23250 53.623 69 32 0 32 100 1 69 1.40e-19 85.5
MS.gene028659.t1 AT5G67300 46.667 90 37 1 11 89 17 106 1.63e-19 87.0
MS.gene028659.t1 AT2G25230 52.113 71 33 1 22 92 59 128 1.65e-19 85.5
MS.gene028659.t1 AT4G18770 43.956 91 40 1 11 90 228 318 3.11e-19 87.4
MS.gene028659.t1 AT4G37260 46.154 91 38 1 10 89 23 113 4.74e-19 85.9
MS.gene028659.t1 AT5G14750 55.932 59 26 0 32 90 1 59 7.32e-19 81.6
MS.gene028659.t1 AT5G14750 55.932 59 26 0 32 90 1 59 7.32e-19 81.6
MS.gene028659.t1 AT2G23290 54.412 68 31 0 22 89 46 113 2.29e-18 84.0
MS.gene028659.t1 AT5G40360 47.761 67 35 0 22 88 191 257 5.60e-18 83.2
MS.gene028659.t1 AT3G27785 50.000 68 34 0 22 89 222 289 8.44e-18 83.2
MS.gene028659.t1 AT5G58850 42.222 90 41 1 11 89 116 205 1.28e-17 82.8
MS.gene028659.t1 AT5G49620 46.809 94 36 1 14 93 54 147 2.77e-17 80.9
MS.gene028659.t1 AT1G26780 29.245 212 106 6 11 189 109 309 7.49e-17 80.1
MS.gene028659.t1 AT5G40430 38.835 103 60 2 1 101 63 164 9.21e-17 78.6
MS.gene028659.t1 AT5G11050 45.588 68 37 0 22 89 138 205 1.69e-16 79.3
MS.gene028659.t1 AT1G26780 32.022 178 82 5 11 155 109 280 1.88e-16 78.2
MS.gene028659.t1 AT3G29020 44.928 69 38 0 22 90 98 166 1.37e-15 74.7
MS.gene028659.t1 AT1G69560 38.462 91 45 1 11 90 118 208 1.45e-15 76.3
MS.gene028659.t1 AT1G69560 38.462 91 45 1 11 90 134 224 1.66e-15 76.3
MS.gene028659.t1 AT3G29020 44.928 69 38 0 22 90 100 168 1.76e-15 75.5
MS.gene028659.t1 AT3G09370 40.404 99 48 2 22 115 168 260 2.34e-15 76.3
MS.gene028659.t1 AT3G09370 33.333 204 104 8 22 193 176 379 2.46e-15 76.3
MS.gene028659.t1 AT3G09370 40.404 99 48 2 22 115 163 255 2.53e-15 76.3
MS.gene028659.t1 AT5G02320 49.275 69 35 0 22 90 160 228 3.10e-15 76.3
MS.gene028659.t1 AT5G02320 49.275 69 35 0 22 90 160 228 3.10e-15 76.3
MS.gene028659.t1 AT1G17950 45.588 68 37 0 22 89 38 105 3.27e-15 73.9
MS.gene028659.t1 AT5G02320 49.275 69 35 0 22 90 100 168 3.68e-15 75.9
MS.gene028659.t1 AT5G17800 41.429 70 41 0 20 89 124 193 3.99e-14 72.0
MS.gene028659.t1 AT1G73410 47.059 68 36 0 22 89 39 106 7.31e-14 70.1
MS.gene028659.t1 AT4G00540 46.377 69 37 0 22 90 139 207 1.05e-13 71.2
MS.gene028659.t1 AT4G33450 37.000 100 47 1 22 121 52 135 1.28e-13 69.7
MS.gene028659.t1 AT1G73410 47.059 68 36 0 22 89 39 106 1.33e-13 68.6
MS.gene028659.t1 AT4G00540 46.377 69 37 0 22 90 137 205 1.38e-13 70.9
MS.gene028659.t1 AT5G11510 43.478 69 39 0 22 90 114 182 2.07e-13 70.9
MS.gene028659.t1 AT5G11510 43.478 69 39 0 22 90 114 182 2.07e-13 70.9
MS.gene028659.t1 AT5G11510 43.478 69 39 0 22 90 114 182 2.07e-13 70.9
MS.gene028659.t1 AT5G11510 43.478 69 39 0 22 90 114 182 2.27e-13 70.9
MS.gene028659.t1 AT5G11510 43.478 69 39 0 22 90 114 182 2.43e-13 70.5
MS.gene028659.t1 AT4G32730 38.542 96 54 1 22 112 120 215 4.22e-13 69.7
MS.gene028659.t1 AT4G32730 43.478 69 39 0 22 90 120 188 4.78e-13 69.7
MS.gene028659.t1 AT4G32730 43.478 69 39 0 22 90 120 188 4.78e-13 69.7
MS.gene028659.t1 AT4G32730 43.478 69 39 0 22 90 120 188 4.78e-13 69.7
MS.gene028659.t1 AT4G32730 43.478 69 39 0 22 90 120 188 4.78e-13 69.7
MS.gene028659.t1 AT2G37630 39.286 84 50 1 20 103 38 120 6.75e-13 68.6
MS.gene028659.t1 AT5G59780 58.140 43 18 0 47 89 4 46 1.16e-11 62.4
MS.gene028659.t1 AT3G46130 58.140 43 18 0 47 89 4 46 1.68e-11 62.4
MS.gene028659.t1 AT4G25560 55.319 47 21 0 45 91 3 49 2.60e-11 62.4
MS.gene028659.t1 AT5G61420 53.333 60 22 2 55 112 2 57 4.20e-11 62.8
MS.gene028659.t1 AT3G28910 60.417 48 19 0 51 98 1 48 5.26e-11 62.0
MS.gene028659.t1 AT1G22640 54.000 50 21 1 62 109 16 65 8.48e-11 60.5
MS.gene028659.t1 AT1G14350 41.176 68 40 0 22 89 58 125 8.75e-11 62.4
MS.gene028659.t1 AT1G14350 41.176 68 40 0 22 89 58 125 8.75e-11 62.4
MS.gene028659.t1 AT2G02820 41.176 68 40 0 22 89 63 130 9.10e-11 62.4
MS.gene028659.t1 AT2G02820 41.176 68 40 0 22 89 63 130 9.56e-11 62.4

Find 44 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGATGGCTTAACTATTTA+AGG 0.112532 2.1:+7987613 MS.gene028659:CDS
GACTCTTGGTTATGGTAAAA+AGG 0.206227 2.1:-7988404 None:intergenic
TGCACTCTTTATGCTAATAT+TGG 0.222426 2.1:+7987684 MS.gene028659:CDS
AACATGGAACTGGTGGAAAT+TGG 0.280847 2.1:+7987450 None:intergenic
ACAAGACTTTCTTTCATCAT+AGG 0.287701 2.1:-7988485 None:intergenic
TGTTGGTGTTTGGTTGTAAT+AGG 0.304069 2.1:-7988312 None:intergenic
AAAGAAAGTCTTGTCATGTT+TGG 0.330975 2.1:+7988494 MS.gene028659:CDS
AATTCTCCATGCTTAATGTT+TGG 0.347724 2.1:-7987636 None:intergenic
AAGATGTGTTTGTTGGTGTT+TGG 0.363740 2.1:-7988322 None:intergenic
GGGAAACAAGAAGAAATAAT+GGG 0.382296 2.1:+7988557 MS.gene028659:CDS
AATAGTGGTAGTTGTAATAA+TGG 0.383368 2.1:+7988761 MS.gene028659:CDS
AATTACTAGTACTACACCTT+TGG 0.385674 2.1:+7988700 MS.gene028659:CDS
TGGGAAACAAGAAGAAATAA+TGG 0.387514 2.1:+7988556 MS.gene028659:CDS
AATGAAGAAGAAGTTAGATA+TGG 0.422083 2.1:-7988272 None:intergenic
ATCCATTGAGTAAGGACTCT+TGG 0.433515 2.1:-7988418 None:intergenic
CAAGACTTTCTTTCATCATA+GGG 0.452330 2.1:-7988484 None:intergenic
GTTGTGAAAGATGTGTTTGT+TGG 0.453635 2.1:-7988329 None:intergenic
AGTTCATCTGATGGAAGTCT+TGG 0.457156 2.1:+7988536 MS.gene028659:CDS
CAATTAATTAGTAGTAATAG+TGG 0.461972 2.1:+7988746 MS.gene028659:CDS
GAACAGAAAATTGTTGTTCA+AGG 0.466343 2.1:-7988355 None:intergenic
TGAGTAAGGACTCTTGGTTA+TGG 0.482737 2.1:-7988412 None:intergenic
ATATCATTATCAGTTCTTCC+AGG 0.493883 2.1:-7988176 None:intergenic
AACCAAGAGTCCTTACTCAA+TGG 0.500916 2.1:+7988416 MS.gene028659:CDS
ACTACTAAATCCATTGAGTA+AGG 0.501644 2.1:-7988426 None:intergenic
ATTATAGCTGCTCAATTACC+TGG 0.503307 2.1:+7988158 MS.gene028659:CDS
AACAGAAAATTGTTGTTCAA+GGG 0.506500 2.1:-7988354 None:intergenic
AACAAGTTCAATCTTAGTCA+TGG 0.515420 2.1:+7988602 MS.gene028659:CDS
GTTCATCTGATGGAAGTCTT+GGG 0.521622 2.1:+7988537 MS.gene028659:CDS
TAACCAATGGGAAAGAGAAA+AGG 0.522948 2.1:+7988643 MS.gene028659:CDS
TTTATGCTAATATTGGAAGC+AGG 0.525461 2.1:+7987691 MS.gene028659:CDS
AGTTGTTGCAGTTCATCTGA+TGG 0.532249 2.1:+7988527 MS.gene028659:CDS
TCTTGTCATGTTTGGAAGTG+AGG 0.538114 2.1:+7988502 MS.gene028659:CDS
TGTTGTTGATGTTAACCAAT+GGG 0.544924 2.1:+7988631 MS.gene028659:CDS
CTTGTCATGTTTGGAAGTGA+GGG 0.545796 2.1:+7988503 MS.gene028659:CDS
TTAAGGCCAAACATTAAGCA+TGG 0.557076 2.1:+7987630 MS.gene028659:CDS
GAGATTGAGCTACTTGATGA+AGG 0.559668 2.1:-7988377 None:intergenic
TAATAGGAGGTGCAATGAGA+AGG 0.571543 2.1:-7988296 None:intergenic
AAGACTGTGTTATGAGATTG+AGG 0.571621 2.1:-7988248 None:intergenic
TGGTGTTTGGTTGTAATAGG+AGG 0.585503 2.1:-7988309 None:intergenic
TATTGATGAAAACAAGATGG+AGG 0.610453 2.1:+7988793 MS.gene028659:CDS
TACTCAAGATCATAATCCAA+AGG 0.614612 2.1:-7988716 None:intergenic
GAGTATTGATGAAAACAAGA+TGG 0.617655 2.1:+7988790 MS.gene028659:CDS
ATGTTGTTGATGTTAACCAA+TGG 0.639344 2.1:+7988630 MS.gene028659:CDS
GGAAACAAGAAGAAATAATG+GGG 0.651361 2.1:+7988558 MS.gene028659:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATGATATCAAAAACTAT+TGG + chr2.1:7988189-7988208 MS.gene028659:CDS 15.0%
!! TAATTTCAAAGTAGATTATT+AGG - chr2.1:7987818-7987837 None:intergenic 15.0%
!!! TATTTTCATGATATTGTTTT+AGG + chr2.1:7988129-7988148 MS.gene028659:intron 15.0%
!!! TCATGTTATATATCTTTTTT+AGG + chr2.1:7987561-7987580 MS.gene028659:intron 15.0%
!! AAAAGTTGAAGCAAAAAAAA+GGG - chr2.1:7987882-7987901 None:intergenic 20.0%
!! CAATTAATTAGTAGTAATAG+TGG + chr2.1:7988746-7988765 MS.gene028659:CDS 20.0%
!!! AATTTATGTACCTTTGAAAA+TGG - chr2.1:7987928-7987947 None:intergenic 20.0%
!!! ATATATCTTTTTTAGGTCTA+AGG + chr2.1:7987568-7987587 MS.gene028659:intron 20.0%
!!! TATATAACATGAGATTTGTT+AGG - chr2.1:7987553-7987572 None:intergenic 20.0%
! AAAGTTGAAGCAAAAAAAAG+GGG - chr2.1:7987881-7987900 None:intergenic 25.0%
! AACCAAACAATATATATGAG+TGG - chr2.1:7988074-7988093 None:intergenic 25.0%
! AATAGTGGTAGTTGTAATAA+TGG + chr2.1:7988761-7988780 MS.gene028659:CDS 25.0%
! AATCCATGTAGTCAAAATAT+AGG - chr2.1:7988026-7988045 None:intergenic 25.0%
! AATGAAGAAGAAGTTAGATA+TGG - chr2.1:7988275-7988294 None:intergenic 25.0%
! AATGTCAATGTCAATATTTC+TGG - chr2.1:7987852-7987871 None:intergenic 25.0%
! AGGTACATAAATTAACACAA+AGG + chr2.1:7987935-7987954 MS.gene028659:intron 25.0%
! ATATAGGTAGAATATAGATG+AGG - chr2.1:7988010-7988029 None:intergenic 25.0%
! ATCCACTCATATATATTGTT+TGG + chr2.1:7988069-7988088 MS.gene028659:intron 25.0%
! CAAAAGTTGAAGCAAAAAAA+AGG - chr2.1:7987883-7987902 None:intergenic 25.0%
!! AACAGAAAATTGTTGTTCAA+GGG - chr2.1:7988357-7988376 None:intergenic 25.0%
!! AACTTTTGATCATGAAATCT+AGG + chr2.1:7987895-7987914 MS.gene028659:intron 25.0%
!! ACTTTTGATCATGAAATCTA+GGG + chr2.1:7987896-7987915 MS.gene028659:intron 25.0%
!!! AGATGAGGTTTTAATCAAAA+TGG - chr2.1:7987995-7988014 None:intergenic 25.0%
!!! GATGAGGTTTTAATCAAAAT+GGG - chr2.1:7987994-7988013 None:intergenic 25.0%
!!! TTTCATGATATTGTTTTAGG+TGG + chr2.1:7988132-7988151 MS.gene028659:intron 25.0%
AAAAAGCTGGTAAGAATTCT+TGG + chr2.1:7987486-7987505 MS.gene028659:CDS 30.0%
AACAAGTTCAATCTTAGTCA+TGG + chr2.1:7988602-7988621 MS.gene028659:CDS 30.0%
AATTACTAGTACTACACCTT+TGG + chr2.1:7988700-7988719 MS.gene028659:CDS 30.0%
AATTCTCCATGCTTAATGTT+TGG - chr2.1:7987639-7987658 None:intergenic 30.0%
ACAAGACTTTCTTTCATCAT+AGG - chr2.1:7988488-7988507 None:intergenic 30.0%
ACTACTAAATCCATTGAGTA+AGG - chr2.1:7988429-7988448 None:intergenic 30.0%
ACTCTTGGTTATGGTAAAAA+GGG - chr2.1:7988406-7988425 None:intergenic 30.0%
ATATCATTATCAGTTCTTCC+AGG - chr2.1:7988179-7988198 None:intergenic 30.0%
ATGTTGTTGATGTTAACCAA+TGG + chr2.1:7988630-7988649 MS.gene028659:CDS 30.0%
CAAGACTTTCTTTCATCATA+GGG - chr2.1:7988487-7988506 None:intergenic 30.0%
GAAAAAGTTGTAGATTGAGA+TGG + chr2.1:7987598-7987617 MS.gene028659:CDS 30.0%
GGAAACAAGAAGAAATAATG+GGG + chr2.1:7988558-7988577 MS.gene028659:CDS 30.0%
GGGAAACAAGAAGAAATAAT+GGG + chr2.1:7988557-7988576 MS.gene028659:CDS 30.0%
TACTCAAGATCATAATCCAA+AGG - chr2.1:7988719-7988738 None:intergenic 30.0%
TATTGATGAAAACAAGATGG+AGG + chr2.1:7988793-7988812 MS.gene028659:CDS 30.0%
TGAGATGGCTTAACTATTTA+AGG + chr2.1:7987613-7987632 MS.gene028659:CDS 30.0%
TGCACTCTTTATGCTAATAT+TGG + chr2.1:7987684-7987703 MS.gene028659:CDS 30.0%
TGGGAAACAAGAAGAAATAA+TGG + chr2.1:7988556-7988575 MS.gene028659:CDS 30.0%
TGTTGTTGATGTTAACCAAT+GGG + chr2.1:7988631-7988650 MS.gene028659:CDS 30.0%
TTTATGCTAATATTGGAAGC+AGG + chr2.1:7987691-7987710 MS.gene028659:CDS 30.0%
! AAAGAAAGTCTTGTCATGTT+TGG + chr2.1:7988494-7988513 MS.gene028659:CDS 30.0%
! CTTTTGATCATGAAATCTAG+GGG + chr2.1:7987897-7987916 MS.gene028659:intron 30.0%
! GAACAGAAAATTGTTGTTCA+AGG - chr2.1:7988358-7988377 None:intergenic 30.0%
!! AATGTCAATATTTCTGGATC+TGG - chr2.1:7987846-7987865 None:intergenic 30.0%
!! GAGTATTGATGAAAACAAGA+TGG + chr2.1:7988790-7988809 MS.gene028659:CDS 30.0%
!!! CTACCTATATTTTGACTACA+TGG + chr2.1:7988020-7988039 MS.gene028659:intron 30.0%
!!! GTTTTGAAGTTGATATTGCA+TGG - chr2.1:7988465-7988484 None:intergenic 30.0%
AAGACTGTGTTATGAGATTG+AGG - chr2.1:7988251-7988270 None:intergenic 35.0%
ATTATAGCTGCTCAATTACC+TGG + chr2.1:7988158-7988177 MS.gene028659:CDS 35.0%
ATTTCTCTTCCTCAAAAAGC+TGG + chr2.1:7987473-7987492 MS.gene028659:CDS 35.0%
GACTCTTGGTTATGGTAAAA+AGG - chr2.1:7988407-7988426 None:intergenic 35.0%
GTTGTGAAAGATGTGTTTGT+TGG - chr2.1:7988332-7988351 None:intergenic 35.0%
TAACCAATGGGAAAGAGAAA+AGG + chr2.1:7988643-7988662 MS.gene028659:CDS 35.0%
TTAAGGCCAAACATTAAGCA+TGG + chr2.1:7987630-7987649 MS.gene028659:CDS 35.0%
! AAGATGTGTTTGTTGGTGTT+TGG - chr2.1:7988325-7988344 None:intergenic 35.0%
! AGGGGTTTTACCATTTTCAA+AGG + chr2.1:7987915-7987934 MS.gene028659:intron 35.0%
! GAATTCTTACCAGCTTTTTG+AGG - chr2.1:7987485-7987504 None:intergenic 35.0%
! TGTTGGTGTTTGGTTGTAAT+AGG - chr2.1:7988315-7988334 None:intergenic 35.0%
!!! TTTTTAGGTCTAAGGAGATG+TGG + chr2.1:7987576-7987595 MS.gene028659:intron 35.0%
AACCAAGAGTCCTTACTCAA+TGG + chr2.1:7988416-7988435 MS.gene028659:CDS 40.0%
AGTTCATCTGATGGAAGTCT+TGG + chr2.1:7988536-7988555 MS.gene028659:CDS 40.0%
AGTTGTTGCAGTTCATCTGA+TGG + chr2.1:7988527-7988546 MS.gene028659:CDS 40.0%
ATCCATTGAGTAAGGACTCT+TGG - chr2.1:7988421-7988440 None:intergenic 40.0%
CTTGTCATGTTTGGAAGTGA+GGG + chr2.1:7988503-7988522 MS.gene028659:CDS 40.0%
GAGATTGAGCTACTTGATGA+AGG - chr2.1:7988380-7988399 None:intergenic 40.0%
GTTCATCTGATGGAAGTCTT+GGG + chr2.1:7988537-7988556 MS.gene028659:CDS 40.0%
TCTTGTCATGTTTGGAAGTG+AGG + chr2.1:7988502-7988521 MS.gene028659:CDS 40.0%
TGAGTAAGGACTCTTGGTTA+TGG - chr2.1:7988415-7988434 None:intergenic 40.0%
TGGTGTTTGGTTGTAATAGG+AGG - chr2.1:7988312-7988331 None:intergenic 40.0%
! TAATAGGAGGTGCAATGAGA+AGG - chr2.1:7988299-7988318 None:intergenic 40.0%
! TCACCTTTTCTCTTTCCCAT+TGG - chr2.1:7988649-7988668 None:intergenic 40.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 7987453 7988838 7987453 ID=MS.gene028659
chr2.1 mRNA 7987453 7988838 7987453 ID=MS.gene028659.t1;Parent=MS.gene028659
chr2.1 exon 7987453 7987507 7987453 ID=MS.gene028659.t1.exon1;Parent=MS.gene028659.t1
chr2.1 CDS 7987453 7987507 7987453 ID=cds.MS.gene028659.t1;Parent=MS.gene028659.t1
chr2.1 exon 7987583 7987712 7987583 ID=MS.gene028659.t1.exon2;Parent=MS.gene028659.t1
chr2.1 CDS 7987583 7987712 7987583 ID=cds.MS.gene028659.t1;Parent=MS.gene028659.t1
chr2.1 exon 7988151 7988838 7988151 ID=MS.gene028659.t1.exon3;Parent=MS.gene028659.t1
chr2.1 CDS 7988151 7988838 7988151 ID=cds.MS.gene028659.t1;Parent=MS.gene028659.t1
Gene Sequence

>MS.gene028659

ATGGAACTGGTGGAAATTGGATTTCTCTTCCTCAAAAAGCTGGTAAGAATTCTTGGTATTTCATGAAAAATGCTTGATGAAGTTAAATAGTTTTAAACCTAACAAATCTCATGTTATATATCTTTTTTAGGTCTAAGGAGATGTGGAAAAAGTTGTAGATTGAGATGGCTTAACTATTTAAGGCCAAACATTAAGCATGGAGAATTTTCAGATGAAGAAGACAGAATCATTTGCACTCTTTATGCTAATATTGGAAGCAGGTATTAGTTATTATACTAATATTTTTATACACTATATATAGAAAAAATCTCACTACTAGTACTACTTGTACTTATTTTCACACATTTTTTTTGCTTTTTATACCTAATAATCTACTTTGAAATTAACTATCCAGATCCAGAAATATTGACATTGACATTTTCTTTCCCCTTTTTTTTGCTTCAACTTTTGATCATGAAATCTAGGGGTTTTACCATTTTCAAAGGTACATAAATTAACACAAAGGTTTTTTCATTTTTTTTTTATAAGCATTTTTTTTCCCATTTTGATTAAAACCTCATCTATATTCTACCTATATTTTGACTACATGGATTTCAAGTATAGATCTAGCATCATCATCCACTCATATATATTGTTTGGTTAATGAAAACTACATTTGATTTTTTTTTTTTTGTCTTATTTTCATGATATTGTTTTAGGTGGTCAATTATAGCTGCTCAATTACCTGGAAGAACTGATAATGATATCAAAAACTATTGGAACACAAAACTAAAGAAGAAACTCATGAATCTTCTTCCTCAATCTCATAACACAGTCTTACCATATCTAACTTCTTCTTCATTTCCTTCTCATTGCACCTCCTATTACAACCAAACACCAACAAACACATCTTTCACAACATCCCTTGAACAACAATTTTCTGTTCCTTCATCAAGTAGCTCAATCTCTCTCCCTTTTTACCATAACCAAGAGTCCTTACTCAATGGATTTAGTAGTAATACTAATGCTTCCATGCAATATCAACTTCAAAACCCTATGATGAAAGAAAGTCTTGTCATGTTTGGAAGTGAGGGAAGTTGTTGCAGTTCATCTGATGGAAGTCTTGGGAAACAAGAAGAAATAATGGGGTTTCAGAATTTCATGCAAATCAACAAGTTCAATCTTAGTCATGGAAGTGATGTTGTTGATGTTAACCAATGGGAAAGAGAAAAGGTGAATTTATGCTTTAGTCAAAATCATGAAAAGCAAATTACTAGTACTACACCTTTGGATTATGATCTTGAGTATATTAAGCAATTAATTAGTAGTAATAGTGGTAGTTGTAATAATGGTTACTTGAGTATTGATGAAAACAAGATGGAGGAGAAGACTATGTACTATTACTGA
Protein sequence

>MS.gene028659.t1

MELVEIGFLFLKKLVRILGLRRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICTLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMNLLPQSHNTVLPYLTSSSFPSHCTSYYNQTPTNTSFTTSLEQQFSVPSSSSSISLPFYHNQESLLNGFSSNTNASMQYQLQNPMMKESLVMFGSEGSCCSSSDGSLGKQEEIMGFQNFMQINKFNLSHGSDVVDVNQWEREKVNLCFSQNHEKQITSTTPLDYDLEYIKQLISSNSGSCNNGYLSIDENKMEEKTMYYY