Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028685.t1 | KEH39362.1 | 94.1 | 624 | 28 | 4 | 1 | 623 | 1 | 616 | 0.00E+00 | 1127.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028685.t1 | Q9SJJ3 | 42.6 | 378 | 159 | 8 | 176 | 525 | 165 | 512 | 7.0e-65 | 250.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028685.t1 | A0A072VC89 | 94.1 | 624 | 28 | 4 | 1 | 623 | 1 | 616 | 0.0e+00 | 1127.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene028685.t1 | TF | HB-BELL |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028685.t1 | MTR_2g095050 | 94.071 | 624 | 28 | 4 | 1 | 623 | 1 | 616 | 0.0 | 1157 |
MS.gene028685.t1 | MTR_7g065050 | 47.482 | 278 | 122 | 5 | 235 | 512 | 124 | 377 | 6.78e-77 | 254 |
MS.gene028685.t1 | MTR_4g019450 | 48.780 | 287 | 110 | 6 | 241 | 520 | 189 | 445 | 1.44e-74 | 250 |
MS.gene028685.t1 | MTR_8g078480 | 43.525 | 278 | 139 | 5 | 244 | 514 | 384 | 650 | 1.98e-64 | 227 |
MS.gene028685.t1 | MTR_1g057790 | 44.061 | 261 | 127 | 4 | 247 | 501 | 160 | 407 | 5.87e-61 | 214 |
MS.gene028685.t1 | MTR_8g098815 | 45.420 | 262 | 123 | 6 | 248 | 503 | 185 | 432 | 1.85e-60 | 213 |
MS.gene028685.t1 | MTR_5g018860 | 42.336 | 274 | 136 | 6 | 244 | 507 | 330 | 591 | 3.48e-60 | 214 |
MS.gene028685.t1 | MTR_7g106320 | 47.788 | 226 | 97 | 4 | 302 | 524 | 232 | 439 | 1.82e-59 | 211 |
MS.gene028685.t1 | MTR_3g112300 | 39.604 | 303 | 120 | 7 | 244 | 520 | 158 | 423 | 1.43e-58 | 205 |
MS.gene028685.t1 | MTR_1g023050 | 42.958 | 284 | 125 | 6 | 252 | 521 | 174 | 434 | 1.85e-58 | 207 |
MS.gene028685.t1 | MTR_3g112300 | 39.604 | 303 | 120 | 7 | 244 | 520 | 158 | 423 | 4.46e-58 | 205 |
MS.gene028685.t1 | MTR_4g051532 | 40.446 | 314 | 159 | 7 | 248 | 554 | 217 | 509 | 6.28e-58 | 207 |
MS.gene028685.t1 | MTR_3g112290 | 38.889 | 306 | 143 | 8 | 230 | 522 | 154 | 428 | 3.85e-55 | 194 |
MS.gene028685.t1 | MTR_3g112300 | 38.039 | 255 | 127 | 4 | 244 | 487 | 158 | 392 | 1.63e-43 | 160 |
MS.gene028685.t1 | MTR_1g016490 | 35.577 | 208 | 114 | 4 | 312 | 518 | 315 | 503 | 4.04e-34 | 137 |
MS.gene028685.t1 | MTR_3g112300 | 34.940 | 249 | 101 | 6 | 244 | 466 | 158 | 371 | 2.65e-33 | 131 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028685.t1 | AT2G27990 | 50.676 | 296 | 105 | 6 | 237 | 525 | 251 | 512 | 1.77e-82 | 271 |
MS.gene028685.t1 | AT5G02030 | 46.974 | 347 | 137 | 12 | 185 | 510 | 98 | 418 | 9.46e-73 | 244 |
MS.gene028685.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene028685.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene028685.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene028685.t1 | AT4G34610 | 44.966 | 298 | 136 | 8 | 249 | 542 | 141 | 414 | 4.70e-67 | 228 |
MS.gene028685.t1 | AT4G36870 | 45.489 | 266 | 127 | 5 | 248 | 507 | 312 | 565 | 1.26e-64 | 226 |
MS.gene028685.t1 | AT4G36870 | 45.489 | 266 | 127 | 5 | 248 | 507 | 312 | 565 | 1.26e-64 | 226 |
MS.gene028685.t1 | AT1G75410 | 38.793 | 348 | 190 | 7 | 168 | 507 | 81 | 413 | 2.41e-64 | 221 |
MS.gene028685.t1 | AT1G75410 | 38.793 | 348 | 190 | 7 | 168 | 507 | 81 | 413 | 2.41e-64 | 221 |
MS.gene028685.t1 | AT2G16400 | 40.972 | 288 | 145 | 7 | 243 | 529 | 109 | 372 | 8.96e-62 | 213 |
MS.gene028685.t1 | AT2G23760 | 43.542 | 271 | 134 | 5 | 244 | 507 | 233 | 491 | 1.97e-61 | 215 |
MS.gene028685.t1 | AT2G23760 | 43.542 | 271 | 134 | 5 | 244 | 507 | 233 | 491 | 1.97e-61 | 215 |
MS.gene028685.t1 | AT2G23760 | 43.542 | 271 | 134 | 5 | 244 | 507 | 233 | 491 | 1.97e-61 | 215 |
MS.gene028685.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene028685.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene028685.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene028685.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene028685.t1 | AT1G19700 | 42.182 | 275 | 131 | 4 | 244 | 507 | 161 | 418 | 8.46e-60 | 209 |
MS.gene028685.t1 | AT2G35940 | 44.906 | 265 | 126 | 3 | 249 | 501 | 190 | 446 | 1.23e-59 | 211 |
MS.gene028685.t1 | AT2G35940 | 44.906 | 265 | 126 | 3 | 249 | 501 | 190 | 446 | 1.23e-59 | 211 |
MS.gene028685.t1 | AT2G35940 | 44.906 | 265 | 126 | 3 | 249 | 501 | 190 | 446 | 1.23e-59 | 211 |
MS.gene028685.t1 | AT2G27220 | 38.255 | 298 | 135 | 6 | 240 | 537 | 73 | 321 | 1.21e-52 | 187 |
MS.gene028685.t1 | AT2G27220 | 38.255 | 298 | 135 | 6 | 240 | 537 | 73 | 321 | 1.21e-52 | 187 |
MS.gene028685.t1 | AT2G23760 | 36.533 | 323 | 134 | 6 | 244 | 507 | 233 | 543 | 7.11e-52 | 190 |
MS.gene028685.t1 | AT5G41410 | 38.768 | 276 | 141 | 5 | 249 | 507 | 194 | 458 | 8.49e-52 | 189 |
MS.gene028685.t1 | AT4G36870 | 42.510 | 247 | 124 | 5 | 248 | 488 | 312 | 546 | 2.83e-51 | 186 |
MS.gene028685.t1 | AT2G27990 | 46.154 | 234 | 88 | 4 | 237 | 466 | 251 | 450 | 9.89e-51 | 182 |
MS.gene028685.t1 | AT1G75410 | 36.585 | 328 | 185 | 7 | 168 | 487 | 81 | 393 | 1.41e-50 | 180 |
MS.gene028685.t1 | AT4G36870 | 42.041 | 245 | 124 | 5 | 248 | 486 | 312 | 544 | 5.53e-50 | 182 |
MS.gene028685.t1 | AT1G75430 | 46.354 | 192 | 85 | 4 | 321 | 507 | 91 | 269 | 6.06e-50 | 175 |
MS.gene028685.t1 | AT2G27220 | 36.392 | 316 | 134 | 7 | 240 | 537 | 73 | 339 | 4.84e-49 | 177 |
MS.gene028685.t1 | AT4G32980 | 31.206 | 282 | 169 | 6 | 244 | 523 | 197 | 455 | 2.83e-37 | 145 |
MS.gene028685.t1 | AT4G32980 | 31.206 | 282 | 169 | 6 | 244 | 523 | 197 | 455 | 2.83e-37 | 145 |
MS.gene028685.t1 | AT1G75430 | 38.816 | 152 | 75 | 4 | 320 | 466 | 90 | 228 | 9.08e-25 | 105 |
Find 110 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATTCTGAACTGAGTGATTT+TGG | 0.076755 | 2.1:-8613825 | MS.gene028685:CDS |
TCACATGTTGTCGCCAATTT+TGG | 0.142956 | 2.1:+8613225 | None:intergenic |
TAAGAGTTCAAGATTCTTAA+AGG | 0.151069 | 2.1:-8613280 | MS.gene028685:CDS |
AATTCTCTTTCTTATGTATA+TGG | 0.222196 | 2.1:-8613732 | MS.gene028685:CDS |
TAGAGAGAAGAGGTATAAAT+TGG | 0.239051 | 2.1:-8610824 | MS.gene028685:CDS |
AATGATAAGCTTTGTGGTTT+TGG | 0.247497 | 2.1:+8613546 | None:intergenic |
GAGGCCTCAGAGAGGCTTTC+CGG | 0.248276 | 2.1:-8611737 | MS.gene028685:CDS |
CTAGCAGGACTCTTTGAATT+AGG | 0.255997 | 2.1:+8613360 | None:intergenic |
TTCGCAGGACTTCACTTATA+TGG | 0.258775 | 2.1:+8611911 | None:intergenic |
TTCAATGCCTTATCCATTCT+AGG | 0.259330 | 2.1:+8610958 | None:intergenic |
ATAGTAGCATAACCAGTAAA+AGG | 0.261980 | 2.1:+8613306 | None:intergenic |
GCTTTATTCTGCTGATAATC+TGG | 0.263343 | 2.1:+8613090 | None:intergenic |
GTTGCACAAAATTTGTTAGA+TGG | 0.282371 | 2.1:-8613258 | MS.gene028685:CDS |
GTCAACTAGTTTAGAACTAT+TGG | 0.285954 | 2.1:+8611864 | None:intergenic |
GTGCCATAAGTTCTCTCATT+TGG | 0.291427 | 2.1:+8611003 | None:intergenic |
GATTTGAAATAGCATTATTT+AGG | 0.301108 | 2.1:+8611941 | None:intergenic |
GATTAATGCAGGTATCAAAT+TGG | 0.308082 | 2.1:-8611119 | MS.gene028685:intron |
TAGTACTAGTTATGGAAATC+TGG | 0.321419 | 2.1:-8613340 | MS.gene028685:CDS |
AAGAATGGATGGAACACTTA+TGG | 0.325450 | 2.1:-8610785 | MS.gene028685:CDS |
CATTTCTGACTCTGACCTAT+TGG | 0.330237 | 2.1:+8613635 | None:intergenic |
AAACCATTTGCATCTGTTGA+TGG | 0.333209 | 2.1:+8612052 | None:intergenic |
AGTAGCCAACACATGTTTAT+CGG | 0.338043 | 2.1:+8611529 | None:intergenic |
ATCCACAACAACAGCATGTT+TGG | 0.346556 | 2.1:-8611759 | MS.gene028685:CDS |
AATGTTTCCTAGTGCTGATT+GGG | 0.352550 | 2.1:-8613145 | MS.gene028685:CDS |
GGCTTTGATCCATGCATCTT+AGG | 0.352803 | 2.1:+8611824 | None:intergenic |
TATGGTGGTGAAAAGCAATT+AGG | 0.353455 | 2.1:-8613714 | MS.gene028685:CDS |
TCATGTCCACTATGTCTATA+TGG | 0.356435 | 2.1:+8610754 | None:intergenic |
CAATGTTTCCTAGTGCTGAT+TGG | 0.357408 | 2.1:-8613146 | MS.gene028685:CDS |
ATTTCTGTTGATGAATAAAC+TGG | 0.361530 | 2.1:+8613969 | None:intergenic |
ATCAACTCACTGATCAATAT+TGG | 0.368498 | 2.1:-8613773 | MS.gene028685:CDS |
GAATCAGAATAATTCTTTGC+AGG | 0.380802 | 2.1:-8613679 | MS.gene028685:CDS |
AGAATCGCCACTGCACGTTC+CGG | 0.392563 | 2.1:+8611718 | None:intergenic |
CATGTGTTGGCTACTCAAAC+TGG | 0.395238 | 2.1:-8611521 | MS.gene028685:CDS |
AGTCCAAATGAGAGAACTTA+TGG | 0.398547 | 2.1:-8611006 | MS.gene028685:CDS |
ATTTGGACTGCAATTCTCAT+TGG | 0.400633 | 2.1:+8611020 | None:intergenic |
AGTCCTGCTAGTACTAGTTA+TGG | 0.414886 | 2.1:-8613348 | MS.gene028685:CDS |
CAAATTCAATGTATGGAACT+TGG | 0.416249 | 2.1:-8610904 | MS.gene028685:CDS |
TCCACAATCTCTAGAAATGA+TGG | 0.429326 | 2.1:+8613416 | None:intergenic |
TGTTGCATCATTAACCTACT+TGG | 0.429908 | 2.1:+8613879 | None:intergenic |
TGAAAATCAAATTCAATGTA+TGG | 0.431807 | 2.1:-8610911 | MS.gene028685:CDS |
TTGCACAAAATTTGTTAGAT+GGG | 0.442823 | 2.1:-8613257 | MS.gene028685:CDS |
ACAAAAGAATAGACCTGAAA+AGG | 0.450106 | 2.1:-8611800 | MS.gene028685:CDS |
CCTAGTTCTTGATACTCAAA+AGG | 0.452958 | 2.1:+8613915 | None:intergenic |
CATGATGTTGTGAGATCACT+TGG | 0.453466 | 2.1:-8610736 | MS.gene028685:CDS |
GAAACTGAGGTTGCTTCTAA+AGG | 0.458889 | 2.1:-8613195 | MS.gene028685:CDS |
TCCATCATTTCTAGAGATTG+TGG | 0.465297 | 2.1:-8613417 | MS.gene028685:CDS |
AGCTACTCCTTACATCAGTC+TGG | 0.473021 | 2.1:-8611995 | MS.gene028685:CDS |
ATGCCTTATCCATTCTAGGC+TGG | 0.476270 | 2.1:+8610962 | None:intergenic |
AAACTGAGGTTGCTTCTAAA+GGG | 0.476654 | 2.1:-8613194 | MS.gene028685:CDS |
CAGCCAGCCTAGAATGGATA+AGG | 0.478775 | 2.1:-8610965 | MS.gene028685:CDS |
GAGAACTTATGGCACTGAAG+TGG | 0.480355 | 2.1:-8610995 | MS.gene028685:CDS |
AGACCTGAAAAGGTTCCATC+AGG | 0.481595 | 2.1:-8611790 | MS.gene028685:CDS |
GTAGCTTAGGTGTTTCTTTG+CGG | 0.484731 | 2.1:-8613113 | MS.gene028685:CDS |
CAATAGGTCAGAGTCAGAAA+TGG | 0.486499 | 2.1:-8613634 | MS.gene028685:CDS |
AGTGATAATGATAAGCTTTG+TGG | 0.494435 | 2.1:+8613540 | None:intergenic |
TTCATGCAGCCAGCCTAGAA+TGG | 0.494640 | 2.1:-8610971 | MS.gene028685:CDS |
TCAAGTCTATCACTTCCAAT+AGG | 0.496873 | 2.1:-8613650 | MS.gene028685:CDS |
AACTGGTCTTTCGCGAAACC+AGG | 0.498308 | 2.1:-8611504 | MS.gene028685:intron |
TCATCCTTCGAATCAGTAGC+AGG | 0.501543 | 2.1:-8612027 | MS.gene028685:CDS |
CATGTTTATCGGTGTCTGTA+GGG | 0.506317 | 2.1:+8611540 | None:intergenic |
GTAAATGAGTTAAATGAGGC+AGG | 0.508118 | 2.1:-8610856 | MS.gene028685:CDS |
AATAGTCAAGGAATTTGTGT+TGG | 0.508836 | 2.1:-8613594 | MS.gene028685:CDS |
TAGTAGCATAACCAGTAAAA+GGG | 0.510354 | 2.1:+8613307 | None:intergenic |
AGTTCGCGTGTGGAAGCCTA+TGG | 0.514217 | 2.1:-8611082 | MS.gene028685:CDS |
AGTACTAGTTATGGAAATCT+GGG | 0.524187 | 2.1:-8613339 | MS.gene028685:CDS |
CAGTGGCGATTCTAAGAGCT+TGG | 0.530709 | 2.1:-8611708 | MS.gene028685:CDS |
GTATTCCAACCACCAAGTCT+TGG | 0.532039 | 2.1:+8613382 | None:intergenic |
ACATGTTTATCGGTGTCTGT+AGG | 0.537212 | 2.1:+8611539 | None:intergenic |
ATGTGTACTTCTTCAACCAT+AGG | 0.539006 | 2.1:+8611066 | None:intergenic |
AGAACTTATGGCACTGAAGT+GGG | 0.539197 | 2.1:-8610994 | MS.gene028685:CDS |
TGTTGTGAGATCACTTGGAT+TGG | 0.539982 | 2.1:-8610731 | MS.gene028685:CDS |
ATCATCACACCAAGACTTGG+TGG | 0.541486 | 2.1:-8613391 | MS.gene028685:CDS |
ATGTGGAATGAGTTCAAGAA+TGG | 0.547007 | 2.1:-8610800 | MS.gene028685:CDS |
GCTTATGTTCATGCAAGAAG+AGG | 0.548768 | 2.1:-8613064 | MS.gene028685:intron |
TAGTTTAGAACTATTGGTTG+TGG | 0.549653 | 2.1:+8611870 | None:intergenic |
TTCAAAGCCAGACTGATGTA+AGG | 0.549663 | 2.1:+8611988 | None:intergenic |
TCTCTTTCTTATGTATATGG+TGG | 0.551473 | 2.1:-8613729 | MS.gene028685:CDS |
TATGGAAATCTGGGTCCACT+TGG | 0.554507 | 2.1:-8613330 | MS.gene028685:CDS |
GTATTGACAAATCATTTCGC+AGG | 0.555399 | 2.1:+8611896 | None:intergenic |
CACAACAACAGCATGTTTGG+AGG | 0.557669 | 2.1:-8611756 | MS.gene028685:CDS |
AAATCACTCAGTTCAGAATG+AGG | 0.558152 | 2.1:+8613828 | None:intergenic |
AAAATCATCACACCAAGACT+TGG | 0.561583 | 2.1:-8613394 | MS.gene028685:CDS |
GTACCATCAACAGATGCAAA+TGG | 0.563901 | 2.1:-8612055 | MS.gene028685:CDS |
AAGAGGTATAAATTGGAATG+TGG | 0.564061 | 2.1:-8610817 | MS.gene028685:CDS |
TCACACCAAGACTTGGTGGT+TGG | 0.564779 | 2.1:-8613387 | MS.gene028685:CDS |
TTTCCATAACTAGTACTAGC+AGG | 0.567280 | 2.1:+8613345 | None:intergenic |
TTAGAACTATTGGTTGTGGT+CGG | 0.571655 | 2.1:+8611874 | None:intergenic |
AGGCTTTCCGGAACGTGCAG+TGG | 0.573018 | 2.1:-8611725 | MS.gene028685:CDS |
CTCCAAACATGCTGTTGTTG+TGG | 0.578756 | 2.1:+8611757 | None:intergenic |
ATGTTTCCTAGTGCTGATTG+GGG | 0.585973 | 2.1:-8613144 | MS.gene028685:CDS |
AGACACCGATAAACATGTGT+TGG | 0.590173 | 2.1:-8611534 | MS.gene028685:CDS |
AAGACCTGCTACTGATTCGA+AGG | 0.594942 | 2.1:+8612023 | None:intergenic |
AGTTAAATGAGGCAGGACAA+TGG | 0.596972 | 2.1:-8610849 | MS.gene028685:CDS |
TGTGGCAAGCCTAAGATGCA+TGG | 0.598137 | 2.1:-8611833 | MS.gene028685:CDS |
AGAAGTAAATGAGTTAAATG+AGG | 0.599304 | 2.1:-8610860 | MS.gene028685:CDS |
CTTATGCATCATAATAGTCA+AGG | 0.601239 | 2.1:-8613606 | MS.gene028685:CDS |
TTAATGCTCGAGTTCGCGTG+TGG | 0.602257 | 2.1:-8611092 | MS.gene028685:CDS |
GGAATGAGTTCAAGAATGGA+TGG | 0.604592 | 2.1:-8610796 | MS.gene028685:CDS |
TAATAATATTACACAAAACA+AGG | 0.606372 | 2.1:-8613511 | MS.gene028685:CDS |
ACTAGTTGACACTAATAATG+TGG | 0.612366 | 2.1:-8611851 | MS.gene028685:CDS |
TATTGATCAGTGAGTTGATG+TGG | 0.613925 | 2.1:+8613777 | None:intergenic |
GACAATGGAGTAGAGAGAAG+AGG | 0.622784 | 2.1:-8610834 | MS.gene028685:CDS |
ATGTGATGTTTCTGAAACTG+AGG | 0.624579 | 2.1:-8613208 | MS.gene028685:CDS |
TGTGGATCATGAAAACCTGA+TGG | 0.624654 | 2.1:+8611775 | None:intergenic |
GTGCAGCTTCAGAACCAAGT+AGG | 0.625967 | 2.1:-8613893 | MS.gene028685:CDS |
CAATCTCTAGAAATGATGGA+AGG | 0.631862 | 2.1:+8613420 | None:intergenic |
TAACCAGTAAAAGGGCCAAG+TGG | 0.664374 | 2.1:+8613315 | None:intergenic |
CGTTCCGGAAAGCCTCTCTG+AGG | 0.668109 | 2.1:+8611733 | None:intergenic |
TGTTTCCTAGTGCTGATTGG+GGG | 0.672245 | 2.1:-8613143 | MS.gene028685:CDS |
CATGTTTGGAGGCCTCAGAG+AGG | 0.725435 | 2.1:-8611745 | MS.gene028685:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ACTTAAAACAAAAATTTAAA+AGG | + | chr2.1:8613465-8613484 | None:intergenic | 10.0% |
!! | TAAATAATTAAGTGTATTAT+AGG | + | chr2.1:8613552-8613571 | None:intergenic | 10.0% |
!! | AAATTTAAAAGGAATGAAAT+TGG | + | chr2.1:8613454-8613473 | None:intergenic | 15.0% |
!! | AATATAAAAAATTTGTACCA+TGG | - | chr2.1:8612311-8612330 | MS.gene028685:intron | 15.0% |
!! | AATTGCAAAGATAAATAAAT+TGG | - | chr2.1:8611885-8611904 | MS.gene028685:CDS | 15.0% |
!! | ATCCATAAAAAAAAATCATA+AGG | - | chr2.1:8613423-8613442 | MS.gene028685:CDS | 15.0% |
!! | TAATAATATTACACAAAACA+AGG | - | chr2.1:8611232-8611251 | MS.gene028685:intron | 15.0% |
!! | TATCTCTACAAATAATTATA+TGG | - | chr2.1:8612158-8612177 | MS.gene028685:intron | 15.0% |
!!! | TAAAGTCAAAGTAATTTTAT+TGG | - | chr2.1:8612528-8612547 | MS.gene028685:intron | 15.0% |
!! | AATTCTCTTTCTTATGTATA+TGG | - | chr2.1:8611011-8611030 | MS.gene028685:CDS | 20.0% |
!! | ATAAAATTTGTATACACTGT+TGG | - | chr2.1:8612203-8612222 | MS.gene028685:intron | 20.0% |
!! | ATGTTTATCTGATGAATTAA+TGG | - | chr2.1:8613587-8613606 | MS.gene028685:CDS | 20.0% |
!! | CTCAAGAATCAAATAAAATT+AGG | + | chr2.1:8612560-8612579 | None:intergenic | 20.0% |
!! | TGAAAATCAAATTCAATGTA+TGG | - | chr2.1:8613832-8613851 | MS.gene028685:CDS | 20.0% |
!! | TTAAGTGTATTATAGGAAAA+CGG | + | chr2.1:8613545-8613564 | None:intergenic | 20.0% |
!! | TTAATTCATCAGATAAACAT+AGG | + | chr2.1:8613587-8613606 | None:intergenic | 20.0% |
!!! | ATACATTGAATTTGATTTTC+AGG | + | chr2.1:8613833-8613852 | None:intergenic | 20.0% |
!!! | ATGATTTTTTTTTATGGATC+TGG | + | chr2.1:8613422-8613441 | None:intergenic | 20.0% |
!!! | ATTTTTCTTCATATCACAAT+TGG | - | chr2.1:8612104-8612123 | MS.gene028685:intron | 20.0% |
!!! | CACCTTATGATTTTTTTTTA+TGG | + | chr2.1:8613428-8613447 | None:intergenic | 20.0% |
!!! | GATTTGAAATAGCATTATTT+AGG | + | chr2.1:8612805-8612824 | None:intergenic | 20.0% |
!!! | TCAATAGATTTTGTTACTTT+TGG | - | chr2.1:8613507-8613526 | MS.gene028685:CDS | 20.0% |
!!! | TTTCTATGTGTTATTTGTTA+AGG | - | chr2.1:8613127-8613146 | MS.gene028685:CDS | 20.0% |
!!! | TTTTAATTGTCTTCAAAGAT+TGG | - | chr2.1:8612609-8612628 | MS.gene028685:intron | 20.0% |
! | AATTTGATACCTGCATTAAT+CGG | + | chr2.1:8613625-8613644 | None:intergenic | 25.0% |
! | AGAAGTAAATGAGTTAAATG+AGG | - | chr2.1:8613883-8613902 | MS.gene028685:CDS | 25.0% |
! | TAAGAGTTCAAGATTCTTAA+AGG | - | chr2.1:8611463-8611482 | MS.gene028685:intron | 25.0% |
! | TTCCAATCAAACAAATCAAA+AGG | + | chr2.1:8613299-8613318 | None:intergenic | 25.0% |
!! | AAAGTATTTGACCATTGTTA+TGG | + | chr2.1:8613366-8613385 | None:intergenic | 25.0% |
!! | ATGATCTGTTAGATCATTTT+GGG | + | chr2.1:8612421-8612440 | None:intergenic | 25.0% |
!! | ATTTCTGTTGATGAATAAAC+TGG | + | chr2.1:8610777-8610796 | None:intergenic | 25.0% |
!! | CTTATGTTTCTCATTTTGAA+GGG | - | chr2.1:8611255-8611274 | MS.gene028685:intron | 25.0% |
!! | TACAGTAACTTGTAAGAAAA+AGG | - | chr2.1:8611797-8611816 | MS.gene028685:CDS | 25.0% |
!! | TATGATCTGTTAGATCATTT+TGG | + | chr2.1:8612422-8612441 | None:intergenic | 25.0% |
!!! | CTCTTATTTGTTTTGAAACT+TGG | - | chr2.1:8612487-8612506 | MS.gene028685:intron | 25.0% |
!!! | GCAAGTTTTAATTTCTGAAA+AGG | - | chr2.1:8611859-8611878 | MS.gene028685:CDS | 25.0% |
!!! | TATTGATTTTCTTAGTATGC+AGG | + | chr2.1:8613493-8613512 | None:intergenic | 25.0% |
!!! | TTATGTTTCTCATTTTGAAG+GGG | - | chr2.1:8611256-8611275 | MS.gene028685:intron | 25.0% |
!!! | TTGCACAAAATTTGTTAGAT+GGG | - | chr2.1:8611486-8611505 | MS.gene028685:intron | 25.0% |
AAACTATATCCGATTAATGC+AGG | - | chr2.1:8613613-8613632 | MS.gene028685:CDS | 30.0% | |
AACCTATATTACACATATCC+CGG | + | chr2.1:8612651-8612670 | None:intergenic | 30.0% | |
AATAGTCAAGGAATTTGTGT+TGG | - | chr2.1:8611149-8611168 | MS.gene028685:intron | 30.0% | |
AATTGTCTCAAGTATATGCA+AGG | + | chr2.1:8611961-8611980 | None:intergenic | 30.0% | |
ACAAAAGAATAGACCTGAAA+AGG | - | chr2.1:8612943-8612962 | MS.gene028685:intron | 30.0% | |
ACTAGTTGACACTAATAATG+TGG | - | chr2.1:8612892-8612911 | MS.gene028685:intron | 30.0% | |
AGTACTAGTTATGGAAATCT+GGG | - | chr2.1:8611404-8611423 | MS.gene028685:intron | 30.0% | |
ATAGTAGCATAACCAGTAAA+AGG | + | chr2.1:8611440-8611459 | None:intergenic | 30.0% | |
ATCAACTCACTGATCAATAT+TGG | - | chr2.1:8610970-8610989 | MS.gene028685:CDS | 30.0% | |
CAAATTCAATGTATGGAACT+TGG | - | chr2.1:8613839-8613858 | MS.gene028685:CDS | 30.0% | |
CTTATGCATCATAATAGTCA+AGG | - | chr2.1:8611137-8611156 | MS.gene028685:intron | 30.0% | |
GAATCAGAATAATTCTTTGC+AGG | - | chr2.1:8611064-8611083 | MS.gene028685:CDS | 30.0% | |
GAATTGTATATCGAGACATT+TGG | - | chr2.1:8613316-8613335 | MS.gene028685:CDS | 30.0% | |
GATTAATGCAGGTATCAAAT+TGG | - | chr2.1:8613624-8613643 | MS.gene028685:CDS | 30.0% | |
GTTATCAGCATCACTTTAAT+AGG | - | chr2.1:8612454-8612473 | MS.gene028685:intron | 30.0% | |
TAGTACTAGTTATGGAAATC+TGG | - | chr2.1:8611403-8611422 | MS.gene028685:intron | 30.0% | |
TAGTAGCATAACCAGTAAAA+GGG | + | chr2.1:8611439-8611458 | None:intergenic | 30.0% | |
TCCTTTGAATTCACTTAAGT+TGG | - | chr2.1:8613273-8613292 | MS.gene028685:CDS | 30.0% | |
TCTATACTGAAAATCCAAGA+TGG | - | chr2.1:8612387-8612406 | MS.gene028685:intron | 30.0% | |
TCTCTTTCTTATGTATATGG+TGG | - | chr2.1:8611014-8611033 | MS.gene028685:CDS | 30.0% | |
TTAAGTGAATTCAAAGGAGT+AGG | + | chr2.1:8613271-8613290 | None:intergenic | 30.0% | |
! | AAGAGGTATAAATTGGAATG+TGG | - | chr2.1:8613926-8613945 | MS.gene028685:CDS | 30.0% |
! | AGTGATAATGATAAGCTTTG+TGG | + | chr2.1:8611206-8611225 | None:intergenic | 30.0% |
! | GCTTATGTTTCTCATTTTGA+AGG | - | chr2.1:8611254-8611273 | MS.gene028685:intron | 30.0% |
! | GTCAACTAGTTTAGAACTAT+TGG | + | chr2.1:8612882-8612901 | None:intergenic | 30.0% |
! | TAGAGAGAAGAGGTATAAAT+TGG | - | chr2.1:8613919-8613938 | MS.gene028685:CDS | 30.0% |
! | TAGTTTAGAACTATTGGTTG+TGG | + | chr2.1:8612876-8612895 | None:intergenic | 30.0% |
! | TCTTAAGTTGTCCATAACAA+TGG | - | chr2.1:8613352-8613371 | MS.gene028685:CDS | 30.0% |
! | TTTTTGCCATATAGACATAG+TGG | - | chr2.1:8613983-8614002 | MS.gene028685:CDS | 30.0% |
!! | AACTGAGTGATTTTGGAAAT+TGG | - | chr2.1:8610925-8610944 | MS.gene028685:CDS | 30.0% |
!! | AATGATAAGCTTTGTGGTTT+TGG | + | chr2.1:8611200-8611219 | None:intergenic | 30.0% |
!! | GTTGCACAAAATTTGTTAGA+TGG | - | chr2.1:8611485-8611504 | MS.gene028685:intron | 30.0% |
!! | TATGTTTCTCATTTTGAAGG+GGG | - | chr2.1:8611257-8611276 | MS.gene028685:intron | 30.0% |
!! | TTTCAGGTCTATTCTTTTGT+AGG | + | chr2.1:8612943-8612962 | None:intergenic | 30.0% |
AAAATCATCACACCAAGACT+TGG | - | chr2.1:8611349-8611368 | MS.gene028685:intron | 35.0% | |
AAACCATTTGCATCTGTTGA+TGG | + | chr2.1:8612694-8612713 | None:intergenic | 35.0% | |
AAACTGAGGTTGCTTCTAAA+GGG | - | chr2.1:8611549-8611568 | MS.gene028685:intron | 35.0% | |
AAATCACTCAGTTCAGAATG+AGG | + | chr2.1:8610918-8610937 | None:intergenic | 35.0% | |
AAGAATGGATGGAACACTTA+TGG | - | chr2.1:8613958-8613977 | MS.gene028685:CDS | 35.0% | |
AATGACTTTATGCTGTTGTG+TGG | - | chr2.1:8611823-8611842 | MS.gene028685:CDS | 35.0% | |
ACCCTAAAAATTTCCACTGT+TGG | - | chr2.1:8613396-8613415 | MS.gene028685:CDS | 35.0% | |
AGTAGCCAACACATGTTTAT+CGG | + | chr2.1:8613217-8613236 | None:intergenic | 35.0% | |
AGTCCAAATGAGAGAACTTA+TGG | - | chr2.1:8613737-8613756 | MS.gene028685:CDS | 35.0% | |
ATGCTTGACAAAAAAACAGC+AGG | - | chr2.1:8613698-8613717 | MS.gene028685:CDS | 35.0% | |
ATGTGGAATGAGTTCAAGAA+TGG | - | chr2.1:8613943-8613962 | MS.gene028685:CDS | 35.0% | |
ATGTGTACTTCTTCAACCAT+AGG | + | chr2.1:8613680-8613699 | None:intergenic | 35.0% | |
ATTTGGACTGCAATTCTCAT+TGG | + | chr2.1:8613726-8613745 | None:intergenic | 35.0% | |
CACAACAGCATAAAGTCATT+TGG | + | chr2.1:8611823-8611842 | None:intergenic | 35.0% | |
GAAAATGTATGTCACCTAGA+TGG | + | chr2.1:8612081-8612100 | None:intergenic | 35.0% | |
GCCAACTTAAGTGAATTCAA+AGG | + | chr2.1:8613277-8613296 | None:intergenic | 35.0% | |
GTAAATGAGTTAAATGAGGC+AGG | - | chr2.1:8613887-8613906 | MS.gene028685:CDS | 35.0% | |
TCAAGTCTATCACTTCCAAT+AGG | - | chr2.1:8611093-8611112 | MS.gene028685:CDS | 35.0% | |
TCATGTCCACTATGTCTATA+TGG | + | chr2.1:8613992-8614011 | None:intergenic | 35.0% | |
TGTTGCATCATTAACCTACT+TGG | + | chr2.1:8610867-8610886 | None:intergenic | 35.0% | |
TTCAATGCCTTATCCATTCT+AGG | + | chr2.1:8613788-8613807 | None:intergenic | 35.0% | |
TTTCCATAACTAGTACTAGC+AGG | + | chr2.1:8611401-8611420 | None:intergenic | 35.0% | |
! | CAATCTCTAGAAATGATGGA+AGG | + | chr2.1:8611326-8611345 | None:intergenic | 35.0% |
! | CATTCTGAACTGAGTGATTT+TGG | - | chr2.1:8610918-8610937 | MS.gene028685:CDS | 35.0% |
! | CCTAGTTCTTGATACTCAAA+AGG | + | chr2.1:8610831-8610850 | None:intergenic | 35.0% |
! | CTGTTTTCGTCAACAGTTTA+AGG | - | chr2.1:8612280-8612299 | MS.gene028685:intron | 35.0% |
! | GCCAACAGTGGAAATTTTTA+GGG | + | chr2.1:8613400-8613419 | None:intergenic | 35.0% |
! | GCTTTATTCTGCTGATAATC+TGG | + | chr2.1:8611656-8611675 | None:intergenic | 35.0% |
! | GTATTGACAAATCATTTCGC+AGG | + | chr2.1:8612850-8612869 | None:intergenic | 35.0% |
! | TATGGTGGTGAAAAGCAATT+AGG | - | chr2.1:8611029-8611048 | MS.gene028685:CDS | 35.0% |
! | TCCACAATCTCTAGAAATGA+TGG | + | chr2.1:8611330-8611349 | None:intergenic | 35.0% |
! | TCCATCATTTCTAGAGATTG+TGG | - | chr2.1:8611326-8611345 | MS.gene028685:intron | 35.0% |
! | TTAGAACTATTGGTTGTGGT+CGG | + | chr2.1:8612872-8612891 | None:intergenic | 35.0% |
! | TTGATAACACCACAGCAATT+GGG | - | chr2.1:8612364-8612383 | MS.gene028685:intron | 35.0% |
! | TTTGATAACACCACAGCAAT+TGG | - | chr2.1:8612363-8612382 | MS.gene028685:intron | 35.0% |
!! | AATGTTTCCTAGTGCTGATT+GGG | - | chr2.1:8611598-8611617 | MS.gene028685:intron | 35.0% |
!! | ATGTGATGTTTCTGAAACTG+AGG | - | chr2.1:8611535-8611554 | MS.gene028685:CDS | 35.0% |
!! | CCTTTTGAGTATCAAGAACT+AGG | - | chr2.1:8610828-8610847 | MS.gene028685:CDS | 35.0% |
!! | TATTGATCAGTGAGTTGATG+TGG | + | chr2.1:8610969-8610988 | None:intergenic | 35.0% |
!!! | GGCCTTTTGATTTGTTTGAT+TGG | - | chr2.1:8613294-8613313 | MS.gene028685:CDS | 35.0% |
!!! | TGGTTTTGAAACTGTTTTGC+CGG | - | chr2.1:8612629-8612648 | MS.gene028685:intron | 35.0% |
AACCCCTTGAAGCCTATAAA+TGG | - | chr2.1:8612031-8612050 | MS.gene028685:CDS | 40.0% | |
ACAACCTTTCCCCCATTTAT+AGG | + | chr2.1:8612046-8612065 | None:intergenic | 40.0% | |
ACCCCTTGAAGCCTATAAAT+GGG | - | chr2.1:8612032-8612051 | MS.gene028685:CDS | 40.0% | |
AGACACCGATAAACATGTGT+TGG | - | chr2.1:8613209-8613228 | MS.gene028685:CDS | 40.0% | |
AGTCCTGCTAGTACTAGTTA+TGG | - | chr2.1:8611395-8611414 | MS.gene028685:intron | 40.0% | |
AGTTAAATGAGGCAGGACAA+TGG | - | chr2.1:8613894-8613913 | MS.gene028685:CDS | 40.0% | |
ATCCACAACAACAGCATGTT+TGG | - | chr2.1:8612984-8613003 | MS.gene028685:intron | 40.0% | |
ATCGAGACATTTGGTCACAT+TGG | - | chr2.1:8613325-8613344 | MS.gene028685:CDS | 40.0% | |
CAATAGGTCAGAGTCAGAAA+TGG | - | chr2.1:8611109-8611128 | MS.gene028685:CDS | 40.0% | |
CATGATGTTGTGAGATCACT+TGG | - | chr2.1:8614007-8614026 | MS.gene028685:CDS | 40.0% | |
CATTTCTGACTCTGACCTAT+TGG | + | chr2.1:8611111-8611130 | None:intergenic | 40.0% | |
CTAGCAGGACTCTTTGAATT+AGG | + | chr2.1:8611386-8611405 | None:intergenic | 40.0% | |
CTTTAATAGTCAAAGCCTGG+AGG | + | chr2.1:8612338-8612357 | None:intergenic | 40.0% | |
GAAACTGAGGTTGCTTCTAA+AGG | - | chr2.1:8611548-8611567 | MS.gene028685:intron | 40.0% | |
GCTTATGTTCATGCAAGAAG+AGG | - | chr2.1:8611679-8611698 | MS.gene028685:intron | 40.0% | |
GGAATGAGTTCAAGAATGGA+TGG | - | chr2.1:8613947-8613966 | MS.gene028685:CDS | 40.0% | |
GTACCATCAACAGATGCAAA+TGG | - | chr2.1:8612688-8612707 | MS.gene028685:intron | 40.0% | |
GTAGCTTAGGTGTTTCTTTG+CGG | - | chr2.1:8611630-8611649 | MS.gene028685:intron | 40.0% | |
GTCATTTGAAAGGTCCATCT+AGG | - | chr2.1:8612064-8612083 | MS.gene028685:CDS | 40.0% | |
GTGCCATAAGTTCTCTCATT+TGG | + | chr2.1:8613743-8613762 | None:intergenic | 40.0% | |
TGCCGGGATATGTGTAATAT+AGG | - | chr2.1:8612646-8612665 | MS.gene028685:intron | 40.0% | |
TGTGGATCATGAAAACCTGA+TGG | + | chr2.1:8612971-8612990 | None:intergenic | 40.0% | |
TGTTGTGAGATCACTTGGAT+TGG | - | chr2.1:8614012-8614031 | MS.gene028685:CDS | 40.0% | |
TTCAAAGCCAGACTGATGTA+AGG | + | chr2.1:8612758-8612777 | None:intergenic | 40.0% | |
TTCGCAGGACTTCACTTATA+TGG | + | chr2.1:8612835-8612854 | None:intergenic | 40.0% | |
! | AAACCTGATGGAACCTTTTC+AGG | + | chr2.1:8612959-8612978 | None:intergenic | 40.0% |
! | ACATGTTTATCGGTGTCTGT+AGG | + | chr2.1:8613207-8613226 | None:intergenic | 40.0% |
! | AGAACTTATGGCACTGAAGT+GGG | - | chr2.1:8613749-8613768 | MS.gene028685:CDS | 40.0% |
! | CATGTTTATCGGTGTCTGTA+GGG | + | chr2.1:8613206-8613225 | None:intergenic | 40.0% |
! | GAGCTTTAATAGTCAAAGCC+TGG | + | chr2.1:8612341-8612360 | None:intergenic | 40.0% |
! | GGCCAACAGTGGAAATTTTT+AGG | + | chr2.1:8613401-8613420 | None:intergenic | 40.0% |
! | GGGAAAGGTTGTCATTTGAA+AGG | - | chr2.1:8612054-8612073 | MS.gene028685:CDS | 40.0% |
! | TCACATGTTGTCGCCAATTT+TGG | + | chr2.1:8611521-8611540 | None:intergenic | 40.0% |
! | TGGGTTTTGCTCTCCAAAAT+TGG | - | chr2.1:8611505-8611524 | MS.gene028685:CDS | 40.0% |
! | TTTGGGCTCTAATTCCATCT+TGG | + | chr2.1:8612404-8612423 | None:intergenic | 40.0% |
!! | ATGTTTCCTAGTGCTGATTG+GGG | - | chr2.1:8611599-8611618 | MS.gene028685:intron | 40.0% |
!! | CAATGTTTCCTAGTGCTGAT+TGG | - | chr2.1:8611597-8611616 | MS.gene028685:intron | 40.0% |
!!! | GGTTTTGAAACTGTTTTGCC+GGG | - | chr2.1:8612630-8612649 | MS.gene028685:intron | 40.0% |
AATTTGTACCATGGACCTCC+AGG | - | chr2.1:8612320-8612339 | MS.gene028685:intron | 45.0% | |
ACCATGAATTACTCGACGAG+GGG | + | chr2.1:8612255-8612274 | None:intergenic | 45.0% | |
AGACCTGAAAAGGTTCCATC+AGG | - | chr2.1:8612953-8612972 | MS.gene028685:intron | 45.0% | |
AGCTACTCCTTACATCAGTC+TGG | - | chr2.1:8612748-8612767 | MS.gene028685:intron | 45.0% | |
ATCATCACACCAAGACTTGG+TGG | - | chr2.1:8611352-8611371 | MS.gene028685:intron | 45.0% | |
ATGCCTTATCCATTCTAGGC+TGG | + | chr2.1:8613784-8613803 | None:intergenic | 45.0% | |
CACAACAACAGCATGTTTGG+AGG | - | chr2.1:8612987-8613006 | MS.gene028685:intron | 45.0% | |
CACCATGAATTACTCGACGA+GGG | + | chr2.1:8612256-8612275 | None:intergenic | 45.0% | |
CAGTATAGACCCAATTGCTG+TGG | + | chr2.1:8612376-8612395 | None:intergenic | 45.0% | |
CCCCATTTATAGGCTTCAAG+GGG | + | chr2.1:8612036-8612055 | None:intergenic | 45.0% | |
CCCCCATTTATAGGCTTCAA+GGG | + | chr2.1:8612037-8612056 | None:intergenic | 45.0% | |
CCCCTTGAAGCCTATAAATG+GGG | - | chr2.1:8612033-8612052 | MS.gene028685:CDS | 45.0% | |
CCCTTGAAGCCTATAAATGG+GGG | - | chr2.1:8612034-8612053 | MS.gene028685:CDS | 45.0% | |
CTCCAAACATGCTGTTGTTG+TGG | + | chr2.1:8612989-8613008 | None:intergenic | 45.0% | |
GAAGCCTATAAATGGGGGAA+AGG | - | chr2.1:8612039-8612058 | MS.gene028685:CDS | 45.0% | |
GACAATGGAGTAGAGAGAAG+AGG | - | chr2.1:8613909-8613928 | MS.gene028685:CDS | 45.0% | |
GAGACAGAGAGACAAACGTA+CGG | + | chr2.1:8613082-8613101 | None:intergenic | 45.0% | |
GTATTCCAACCACCAAGTCT+TGG | + | chr2.1:8611364-8611383 | None:intergenic | 45.0% | |
TAACCAGTAAAAGGGCCAAG+TGG | + | chr2.1:8611431-8611450 | None:intergenic | 45.0% | |
TATGGAAATCTGGGTCCACT+TGG | - | chr2.1:8611413-8611432 | MS.gene028685:intron | 45.0% | |
TCACCATGAATTACTCGACG+AGG | + | chr2.1:8612257-8612276 | None:intergenic | 45.0% | |
TCATCCTTCGAATCAGTAGC+AGG | - | chr2.1:8612716-8612735 | MS.gene028685:intron | 45.0% | |
TCCCCCATTTATAGGCTTCA+AGG | + | chr2.1:8612038-8612057 | None:intergenic | 45.0% | |
TTTATGGATCTGGCCAACAG+TGG | + | chr2.1:8613412-8613431 | None:intergenic | 45.0% | |
! | GAGAACTTATGGCACTGAAG+TGG | - | chr2.1:8613748-8613767 | MS.gene028685:CDS | 45.0% |
! | GGCTTTGATCCATGCATCTT+AGG | + | chr2.1:8612922-8612941 | None:intergenic | 45.0% |
!! | AAGACCTGCTACTGATTCGA+AGG | + | chr2.1:8612723-8612742 | None:intergenic | 45.0% |
!! | CATGTGTTGGCTACTCAAAC+TGG | - | chr2.1:8613222-8613241 | MS.gene028685:CDS | 45.0% |
!! | TGTTTCCTAGTGCTGATTGG+GGG | - | chr2.1:8611600-8611619 | MS.gene028685:intron | 45.0% |
!!! | AGTTTAATTATTATATTTTT+TGG | - | chr2.1:8613159-8613178 | MS.gene028685:CDS | 5.0% |
CAAAGGAGTAGGAACCTACC+TGG | + | chr2.1:8613260-8613279 | None:intergenic | 50.0% | |
CAGCCAGCCTAGAATGGATA+AGG | - | chr2.1:8613778-8613797 | MS.gene028685:CDS | 50.0% | |
GTGCAGCTTCAGAACCAAGT+AGG | - | chr2.1:8610850-8610869 | MS.gene028685:CDS | 50.0% | |
TCCCCTCGTCGAGTAATTCA+TGG | - | chr2.1:8612251-8612270 | MS.gene028685:intron | 50.0% | |
TCCTCATGCTCTCTAGTCTC+TGG | + | chr2.1:8611925-8611944 | None:intergenic | 50.0% | |
TGGGGGAACAGAAGTAGCTT+AGG | - | chr2.1:8611617-8611636 | MS.gene028685:intron | 50.0% | |
TGTGGCAAGCCTAAGATGCA+TGG | - | chr2.1:8612910-8612929 | MS.gene028685:intron | 50.0% | |
TTAATGCTCGAGTTCGCGTG+TGG | - | chr2.1:8613651-8613670 | MS.gene028685:CDS | 50.0% | |
TTCATGCAGCCAGCCTAGAA+TGG | - | chr2.1:8613772-8613791 | MS.gene028685:CDS | 50.0% | |
! | CAGTGGCGATTCTAAGAGCT+TGG | - | chr2.1:8613035-8613054 | MS.gene028685:intron | 50.0% |
! | GCTGTTGTGTGGACTGCAAA+AGG | - | chr2.1:8611834-8611853 | MS.gene028685:CDS | 50.0% |
! | TCCAGAGACTAGAGAGCATG+AGG | - | chr2.1:8611921-8611940 | MS.gene028685:CDS | 50.0% |
!! | AACTGGTCTTTCGCGAAACC+AGG | - | chr2.1:8613239-8613258 | MS.gene028685:CDS | 50.0% |
!! | TCACACCAAGACTTGGTGGT+TGG | - | chr2.1:8611356-8611375 | MS.gene028685:intron | 50.0% |
AGAATCGCCACTGCACGTTC+CGG | + | chr2.1:8613028-8613047 | None:intergenic | 55.0% | |
AGTCAAAGCCTGGAGGTCCA+TGG | + | chr2.1:8612331-8612350 | None:intergenic | 55.0% | |
AGTTCGCGTGTGGAAGCCTA+TGG | - | chr2.1:8613661-8613680 | MS.gene028685:CDS | 55.0% | |
CATGTTTGGAGGCCTCAGAG+AGG | - | chr2.1:8612998-8613017 | MS.gene028685:intron | 55.0% | |
CTGTTCCCCCAATCAGCACT+AGG | + | chr2.1:8611608-8611627 | None:intergenic | 55.0% | |
GGTCTTTCGCGAAACCAGGT+AGG | - | chr2.1:8613243-8613262 | MS.gene028685:CDS | 55.0% | |
! | GGTCCACTTGGCCCTTTTAC+TGG | - | chr2.1:8611425-8611444 | MS.gene028685:intron | 55.0% |
AGGCTTTCCGGAACGTGCAG+TGG | - | chr2.1:8613018-8613037 | MS.gene028685:intron | 60.0% | |
CGTTCCGGAAAGCCTCTCTG+AGG | + | chr2.1:8613013-8613032 | None:intergenic | 60.0% | |
GAGGCCTCAGAGAGGCTTTC+CGG | - | chr2.1:8613006-8613025 | MS.gene028685:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 8610717 | 8614048 | 8610717 | ID=MS.gene028685 |
chr2.1 | mRNA | 8610717 | 8614048 | 8610717 | ID=MS.gene028685.t1;Parent=MS.gene028685 |
chr2.1 | exon | 8613065 | 8614048 | 8613065 | ID=MS.gene028685.t1.exon1;Parent=MS.gene028685.t1 |
chr2.1 | CDS | 8613065 | 8614048 | 8613065 | ID=cds.MS.gene028685.t1;Parent=MS.gene028685.t1 |
chr2.1 | exon | 8611685 | 8612097 | 8611685 | ID=MS.gene028685.t1.exon2;Parent=MS.gene028685.t1 |
chr2.1 | CDS | 8611685 | 8612097 | 8611685 | ID=cds.MS.gene028685.t1;Parent=MS.gene028685.t1 |
chr2.1 | exon | 8611505 | 8611565 | 8611505 | ID=MS.gene028685.t1.exon3;Parent=MS.gene028685.t1 |
chr2.1 | CDS | 8611505 | 8611565 | 8611505 | ID=cds.MS.gene028685.t1;Parent=MS.gene028685.t1 |
chr2.1 | exon | 8610717 | 8611130 | 8610717 | ID=MS.gene028685.t1.exon4;Parent=MS.gene028685.t1 |
chr2.1 | CDS | 8610717 | 8611130 | 8610717 | ID=cds.MS.gene028685.t1;Parent=MS.gene028685.t1 |
Gene Sequence |
Protein sequence |