Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028844.t1 | XP_013465197.1 | 99.1 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 1.90E-153 | 552 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028844.t1 | Q9MAH8 | 51.2 | 367 | 126 | 12 | 8 | 329 | 33 | 391 | 2.4e-48 | 194.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028844.t1 | G7ZVJ2 | 99.1 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 1.4e-153 | 552.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene028844.t1 | TF | TCP |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028844.t1 | MTR_2g090960 | 99.088 | 329 | 3 | 0 | 1 | 329 | 1 | 329 | 0.0 | 674 |
MS.gene028844.t1 | MTR_4g079580 | 54.006 | 337 | 114 | 12 | 3 | 314 | 1 | 321 | 1.49e-103 | 307 |
MS.gene028844.t1 | MTR_8g463380 | 42.574 | 404 | 144 | 13 | 7 | 329 | 37 | 433 | 1.64e-79 | 249 |
MS.gene028844.t1 | MTR_2g078200 | 39.118 | 340 | 135 | 10 | 7 | 326 | 3 | 290 | 2.47e-50 | 169 |
MS.gene028844.t1 | MTR_7g015010 | 62.162 | 74 | 28 | 0 | 18 | 91 | 51 | 124 | 1.97e-24 | 102 |
MS.gene028844.t1 | MTR_6g015350 | 58.824 | 85 | 27 | 2 | 3 | 87 | 33 | 109 | 2.54e-23 | 98.6 |
MS.gene028844.t1 | MTR_4g109660 | 61.765 | 68 | 26 | 0 | 18 | 85 | 50 | 117 | 2.08e-21 | 92.8 |
MS.gene028844.t1 | MTR_3g026050 | 58.824 | 68 | 28 | 0 | 18 | 85 | 51 | 118 | 5.68e-20 | 90.1 |
MS.gene028844.t1 | MTR_6g017055 | 50.746 | 67 | 33 | 0 | 18 | 84 | 120 | 186 | 7.10e-17 | 81.3 |
MS.gene028844.t1 | MTR_1g103380 | 53.333 | 60 | 28 | 0 | 23 | 82 | 200 | 259 | 2.75e-16 | 79.7 |
MS.gene028844.t1 | MTR_7g018500 | 54.386 | 57 | 26 | 0 | 26 | 82 | 122 | 178 | 1.04e-14 | 74.7 |
MS.gene028844.t1 | MTR_4g111935 | 49.206 | 63 | 32 | 0 | 20 | 82 | 128 | 190 | 2.53e-14 | 73.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene028844.t1 | AT3G15030 | 40.602 | 399 | 146 | 14 | 8 | 326 | 29 | 416 | 1.86e-73 | 233 |
MS.gene028844.t1 | AT3G15030 | 40.602 | 399 | 146 | 14 | 8 | 326 | 29 | 416 | 1.86e-73 | 233 |
MS.gene028844.t1 | AT3G15030 | 40.602 | 399 | 146 | 14 | 8 | 326 | 29 | 416 | 1.86e-73 | 233 |
MS.gene028844.t1 | AT3G15030 | 40.602 | 399 | 146 | 14 | 8 | 326 | 29 | 416 | 1.86e-73 | 233 |
MS.gene028844.t1 | AT1G53230 | 44.022 | 368 | 151 | 13 | 8 | 329 | 33 | 391 | 5.99e-69 | 220 |
MS.gene028844.t1 | AT1G53230 | 44.022 | 368 | 151 | 13 | 8 | 329 | 33 | 391 | 5.99e-69 | 220 |
MS.gene028844.t1 | AT2G31070 | 47.222 | 252 | 81 | 12 | 1 | 228 | 1 | 224 | 3.87e-53 | 179 |
MS.gene028844.t1 | AT4G18390 | 57.447 | 94 | 33 | 1 | 18 | 111 | 36 | 122 | 3.39e-27 | 110 |
MS.gene028844.t1 | AT4G18390 | 57.447 | 94 | 33 | 1 | 18 | 111 | 36 | 122 | 3.39e-27 | 110 |
MS.gene028844.t1 | AT3G02150 | 61.905 | 84 | 27 | 1 | 3 | 86 | 58 | 136 | 2.66e-24 | 100 |
MS.gene028844.t1 | AT3G02150 | 61.905 | 84 | 27 | 1 | 3 | 86 | 58 | 136 | 4.33e-24 | 101 |
MS.gene028844.t1 | AT1G30210 | 65.217 | 69 | 24 | 0 | 17 | 85 | 43 | 111 | 7.33e-23 | 97.4 |
MS.gene028844.t1 | AT1G30210 | 65.217 | 69 | 24 | 0 | 17 | 85 | 43 | 111 | 7.33e-23 | 97.4 |
MS.gene028844.t1 | AT5G60970 | 60.000 | 70 | 25 | 1 | 18 | 87 | 57 | 123 | 4.38e-21 | 92.8 |
MS.gene028844.t1 | AT5G08070 | 58.333 | 72 | 28 | 1 | 18 | 87 | 27 | 98 | 7.25e-21 | 90.1 |
MS.gene028844.t1 | AT5G08070 | 58.333 | 72 | 28 | 1 | 18 | 87 | 27 | 98 | 7.25e-21 | 90.1 |
MS.gene028844.t1 | AT1G68800 | 40.659 | 91 | 54 | 0 | 20 | 110 | 108 | 198 | 2.46e-18 | 85.1 |
MS.gene028844.t1 | AT1G68800 | 40.659 | 91 | 54 | 0 | 20 | 110 | 108 | 198 | 2.72e-18 | 85.1 |
MS.gene028844.t1 | AT1G67260 | 54.545 | 66 | 30 | 0 | 19 | 84 | 82 | 147 | 3.54e-18 | 84.7 |
MS.gene028844.t1 | AT1G67260 | 54.545 | 66 | 30 | 0 | 19 | 84 | 82 | 147 | 3.54e-18 | 84.7 |
MS.gene028844.t1 | AT1G67260 | 54.545 | 66 | 30 | 0 | 19 | 84 | 82 | 147 | 4.23e-18 | 84.3 |
MS.gene028844.t1 | AT3G18550 | 50.794 | 63 | 31 | 0 | 20 | 82 | 144 | 206 | 2.90e-14 | 73.6 |
MS.gene028844.t1 | AT3G18550 | 50.000 | 64 | 32 | 0 | 19 | 82 | 143 | 206 | 3.14e-14 | 73.6 |
MS.gene028844.t1 | AT3G18550 | 50.000 | 64 | 32 | 0 | 19 | 82 | 143 | 206 | 3.14e-14 | 73.6 |
MS.gene028844.t1 | AT3G18550 | 50.000 | 64 | 32 | 0 | 19 | 82 | 143 | 206 | 3.19e-14 | 73.6 |
Find 67 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGAATAGAACCGGGTTTA+TGG | 0.199355 | 2.3:+9459052 | MS.gene028844:CDS |
GTTAATTCGCCTGCGTTTCT+AGG | 0.251584 | 2.3:+9459074 | MS.gene028844:CDS |
TGTAACTCTTCTGTTGCATT+TGG | 0.281307 | 2.3:-9458654 | None:intergenic |
ATTCCCCAAGCTTCTATCTT+TGG | 0.299538 | 2.3:+9459227 | MS.gene028844:CDS |
CATCATAACCATAACCATTC+AGG | 0.300787 | 2.3:+9458777 | MS.gene028844:CDS |
TCTTCTGTTGCATTTGGAAT+TGG | 0.308776 | 2.3:-9458648 | None:intergenic |
TGTATTCCTGCTAGAATTCA+AGG | 0.342553 | 2.3:+9459284 | MS.gene028844:CDS |
GATTTGATGCTAATCATAAC+AGG | 0.345674 | 2.3:+9459006 | MS.gene028844:CDS |
TGTTGATTGGCTAATCAAAA+AGG | 0.358266 | 2.3:+9458581 | MS.gene028844:CDS |
TTCAAGGAGGCCACATTGTA+AGG | 0.379947 | 2.3:+9458418 | MS.gene028844:CDS |
ATCATAACAGGATTGTGAAT+TGG | 0.392781 | 2.3:+9459018 | MS.gene028844:CDS |
GAATGAAACCTGAATGGTTA+TGG | 0.404262 | 2.3:-9458785 | None:intergenic |
GCAGAACAATCAGAATCTTC+TGG | 0.415389 | 2.3:+9458732 | MS.gene028844:CDS |
AAGCTTCTATCTTTGGTAGC+AGG | 0.417259 | 2.3:+9459234 | MS.gene028844:CDS |
AGAAGAAGAGGATGGCCTTT+CGG | 0.418415 | 2.3:-9459333 | None:intergenic |
AACAACTCAACACAGGATCT+TGG | 0.421186 | 2.3:+9458909 | MS.gene028844:CDS |
GCTACCAAAGATAGAAGCTT+GGG | 0.431520 | 2.3:-9459231 | None:intergenic |
GGCCACATTGTAAGGGCAAC+AGG | 0.434632 | 2.3:+9458426 | MS.gene028844:CDS |
ACAGCTGATATGAATAGAAC+CGG | 0.440232 | 2.3:+9459044 | MS.gene028844:CDS |
CATTTGAAGCTGAATTGTCT+TGG | 0.440619 | 2.3:-9458950 | None:intergenic |
TTTCTGTCTGATGCTTTGAC+AGG | 0.443796 | 2.3:+9459257 | MS.gene028844:CDS |
TCCACCGAGGCATCGGCAAT+TGG | 0.446878 | 2.3:-9459176 | None:intergenic |
TTTCACCATCACTCCGTCCT+TGG | 0.447022 | 2.3:+9459144 | MS.gene028844:CDS |
TAGAAAAGACAGACATAGTA+AGG | 0.449768 | 2.3:+9458449 | MS.gene028844:CDS |
GTGATGAGAATTAGAAGAAG+AGG | 0.465335 | 2.3:-9459345 | None:intergenic |
GACTCACCAACAGAAGTTGT+TGG | 0.472891 | 2.3:-9458843 | None:intergenic |
TGATTAGCATCAAATCCAAC+AGG | 0.473910 | 2.3:-9458999 | None:intergenic |
GGAGAAATAGTTCAAGTTCA+AGG | 0.475915 | 2.3:+9458402 | MS.gene028844:CDS |
TCGCCTGCGTTTCTAGGCCA+AGG | 0.487784 | 2.3:+9459080 | MS.gene028844:CDS |
GCATTTGGAATTGGATTCCA+TGG | 0.487862 | 2.3:-9458639 | None:intergenic |
TTCTCTGGATCAAATCCTGT+TGG | 0.495922 | 2.3:+9458984 | MS.gene028844:CDS |
GACCGAGTAAAGCTGTTGAT+TGG | 0.496508 | 2.3:+9458568 | MS.gene028844:CDS |
TGCGTTTCTAGGCCAAGGTT+CGG | 0.499180 | 2.3:+9459085 | MS.gene028844:CDS |
TGCTACCAAAGATAGAAGCT+TGG | 0.514624 | 2.3:-9459232 | None:intergenic |
TCCTCACCTTGAATTCTAGC+AGG | 0.529084 | 2.3:-9459290 | None:intergenic |
ATGATGATCCACCGAGGCAT+CGG | 0.529513 | 2.3:-9459183 | None:intergenic |
AGCCAATCAACAGCTTTACT+CGG | 0.548536 | 2.3:-9458570 | None:intergenic |
TTGATTGAATGAAACCTGAA+TGG | 0.548923 | 2.3:-9458791 | None:intergenic |
GCCTTTCGGAACCAACTCCA+TGG | 0.555596 | 2.3:-9459319 | None:intergenic |
TGCAGTAGAAACAAATGAGA+TGG | 0.570074 | 2.3:+9458701 | MS.gene028844:CDS |
TATTCCAATTGCCGATGCCT+CGG | 0.573796 | 2.3:+9459172 | MS.gene028844:CDS |
TCATTCCAAGGACGGAGTGA+TGG | 0.590778 | 2.3:-9459149 | None:intergenic |
GAGGATGAGAGCCATGGAGT+TGG | 0.593361 | 2.3:+9459308 | MS.gene028844:CDS |
TTAATGGGAATGAAGAGCAC+AGG | 0.595991 | 2.3:+9458378 | None:intergenic |
TGCAACAGAAGAGTTACAAG+AGG | 0.599540 | 2.3:+9458659 | MS.gene028844:CDS |
AATCGAACACGTCGATCGCG+AGG | 0.600636 | 2.3:-9458489 | None:intergenic |
GCAATTGGAATATCATTCCA+AGG | 0.606871 | 2.3:-9459161 | None:intergenic |
TCAAGGAGGCCACATTGTAA+GGG | 0.607094 | 2.3:+9458419 | MS.gene028844:CDS |
TACCTGTTGCCCTTACAATG+TGG | 0.607186 | 2.3:-9458428 | None:intergenic |
GCCATGGAGTTGGTTCCGAA+AGG | 0.607349 | 2.3:+9459318 | MS.gene028844:CDS |
TATGATGTTCAAGATCGTCT+CGG | 0.607936 | 2.3:+9458537 | MS.gene028844:CDS |
TCCAATTGCCGATGCCTCGG+TGG | 0.612323 | 2.3:+9459175 | MS.gene028844:CDS |
ATGGGAATGAAGAGCACAGG+AGG | 0.615936 | 2.3:+9458381 | MS.gene028844:CDS |
GAACCTTGGCCTAGAAACGC+AGG | 0.621742 | 2.3:-9459083 | None:intergenic |
TTGGAATATCATTCCAAGGA+CGG | 0.624073 | 2.3:-9459157 | None:intergenic |
AGTAAGGTATACACTGCGAA+AGG | 0.629171 | 2.3:+9458465 | MS.gene028844:CDS |
CAAGGTGAGGATGAGAGCCA+TGG | 0.637843 | 2.3:+9459302 | MS.gene028844:CDS |
TCCTGCTAGAATTCAAGGTG+AGG | 0.647750 | 2.3:+9459289 | MS.gene028844:CDS |
CAGCTGATATGAATAGAACC+GGG | 0.655461 | 2.3:+9459045 | MS.gene028844:CDS |
AAGAACAAACAACTCAACAC+AGG | 0.662739 | 2.3:+9458902 | MS.gene028844:CDS |
TGAGAATTAGAAGAAGAGGA+TGG | 0.669324 | 2.3:-9459341 | None:intergenic |
CTACCAAAGATAGAAGCTTG+GGG | 0.680977 | 2.3:-9459230 | None:intergenic |
AACTTGATCAGCTTCCACCA+TGG | 0.681586 | 2.3:+9458622 | MS.gene028844:CDS |
AGGCGAATTAACCATAAACC+CGG | 0.688672 | 2.3:-9459063 | None:intergenic |
TTTGGAATTGGATTCCATGG+TGG | 0.696350 | 2.3:-9458636 | None:intergenic |
GAAATAGTTCAAGTTCAAGG+AGG | 0.712935 | 2.3:+9458405 | MS.gene028844:CDS |
GTGATTATGATGATCCACCG+AGG | 0.797740 | 2.3:-9459189 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
ATCATAACAGGATTGTGAAT+TGG | + | chr2.3:9459018-9459037 | MS.gene028844:CDS | 30.0% | |
GATTTGATGCTAATCATAAC+AGG | + | chr2.3:9459006-9459025 | MS.gene028844:CDS | 30.0% | |
TAGAAAAGACAGACATAGTA+AGG | + | chr2.3:9458449-9458468 | MS.gene028844:CDS | 30.0% | |
TTGATTGAATGAAACCTGAA+TGG | - | chr2.3:9458794-9458813 | None:intergenic | 30.0% | |
! | AATGATCAAACACTTTTCTC+TGG | + | chr2.3:9458969-9458988 | MS.gene028844:CDS | 30.0% |
! | TGTTGATTGGCTAATCAAAA+AGG | + | chr2.3:9458581-9458600 | MS.gene028844:CDS | 30.0% |
!!! | TTTTTTCCAACAACTTCTGT+TGG | + | chr2.3:9458837-9458856 | MS.gene028844:CDS | 30.0% |
AAGAACAAACAACTCAACAC+AGG | + | chr2.3:9458902-9458921 | MS.gene028844:CDS | 35.0% | |
ACAGCTGATATGAATAGAAC+CGG | + | chr2.3:9459044-9459063 | MS.gene028844:CDS | 35.0% | |
CATCATAACCATAACCATTC+AGG | + | chr2.3:9458777-9458796 | MS.gene028844:CDS | 35.0% | |
GAATGAAACCTGAATGGTTA+TGG | - | chr2.3:9458788-9458807 | None:intergenic | 35.0% | |
GCAATTGGAATATCATTCCA+AGG | - | chr2.3:9459164-9459183 | None:intergenic | 35.0% | |
GTGATGAGAATTAGAAGAAG+AGG | - | chr2.3:9459348-9459367 | None:intergenic | 35.0% | |
TATGAATAGAACCGGGTTTA+TGG | + | chr2.3:9459052-9459071 | MS.gene028844:CDS | 35.0% | |
TATGATGTTCAAGATCGTCT+CGG | + | chr2.3:9458537-9458556 | MS.gene028844:CDS | 35.0% | |
TGAGAATTAGAAGAAGAGGA+TGG | - | chr2.3:9459344-9459363 | None:intergenic | 35.0% | |
TGATTAGCATCAAATCCAAC+AGG | - | chr2.3:9459002-9459021 | None:intergenic | 35.0% | |
TGCAGTAGAAACAAATGAGA+TGG | + | chr2.3:9458701-9458720 | MS.gene028844:CDS | 35.0% | |
TGTAACTCTTCTGTTGCATT+TGG | - | chr2.3:9458657-9458676 | None:intergenic | 35.0% | |
TGTATTCCTGCTAGAATTCA+AGG | + | chr2.3:9459284-9459303 | MS.gene028844:CDS | 35.0% | |
TTGGAATATCATTCCAAGGA+CGG | - | chr2.3:9459160-9459179 | None:intergenic | 35.0% | |
! | CATTTGAAGCTGAATTGTCT+TGG | - | chr2.3:9458953-9458972 | None:intergenic | 35.0% |
! | GAAATAGTTCAAGTTCAAGG+AGG | + | chr2.3:9458405-9458424 | MS.gene028844:CDS | 35.0% |
! | GGAGAAATAGTTCAAGTTCA+AGG | + | chr2.3:9458402-9458421 | MS.gene028844:CDS | 35.0% |
! | TCTTCTGTTGCATTTGGAAT+TGG | - | chr2.3:9458651-9458670 | None:intergenic | 35.0% |
AACAACTCAACACAGGATCT+TGG | + | chr2.3:9458909-9458928 | MS.gene028844:CDS | 40.0% | |
AGCCAATCAACAGCTTTACT+CGG | - | chr2.3:9458573-9458592 | None:intergenic | 40.0% | |
AGGCGAATTAACCATAAACC+CGG | - | chr2.3:9459066-9459085 | None:intergenic | 40.0% | |
AGTAAGGTATACACTGCGAA+AGG | + | chr2.3:9458465-9458484 | MS.gene028844:CDS | 40.0% | |
ATGGTGAAAAACTGGACTGA+AGG | - | chr2.3:9459133-9459152 | None:intergenic | 40.0% | |
ATTCCCCAAGCTTCTATCTT+TGG | + | chr2.3:9459227-9459246 | MS.gene028844:CDS | 40.0% | |
CAGCTGATATGAATAGAACC+GGG | + | chr2.3:9459045-9459064 | MS.gene028844:CDS | 40.0% | |
CTACCAAAGATAGAAGCTTG+GGG | - | chr2.3:9459233-9459252 | None:intergenic | 40.0% | |
GCAGAACAATCAGAATCTTC+TGG | + | chr2.3:9458732-9458751 | MS.gene028844:CDS | 40.0% | |
GCTACCAAAGATAGAAGCTT+GGG | - | chr2.3:9459234-9459253 | None:intergenic | 40.0% | |
TGCAACAGAAGAGTTACAAG+AGG | + | chr2.3:9458659-9458678 | MS.gene028844:CDS | 40.0% | |
TGCTACCAAAGATAGAAGCT+TGG | - | chr2.3:9459235-9459254 | None:intergenic | 40.0% | |
TGGTGAAAAACTGGACTGAA+GGG | - | chr2.3:9459132-9459151 | None:intergenic | 40.0% | |
TTCTCTGGATCAAATCCTGT+TGG | + | chr2.3:9458984-9459003 | MS.gene028844:CDS | 40.0% | |
TTTCTGTCTGATGCTTTGAC+AGG | + | chr2.3:9459257-9459276 | MS.gene028844:CDS | 40.0% | |
! | AAGCTTCTATCTTTGGTAGC+AGG | + | chr2.3:9459234-9459253 | MS.gene028844:CDS | 40.0% |
! | GCATTTGGAATTGGATTCCA+TGG | - | chr2.3:9458642-9458661 | None:intergenic | 40.0% |
! | TTTGGAATTGGATTCCATGG+TGG | - | chr2.3:9458639-9458658 | None:intergenic | 40.0% |
AACTTGATCAGCTTCCACCA+TGG | + | chr2.3:9458622-9458641 | MS.gene028844:CDS | 45.0% | |
AGAAGAAGAGGATGGCCTTT+CGG | - | chr2.3:9459336-9459355 | None:intergenic | 45.0% | |
GACCGAGTAAAGCTGTTGAT+TGG | + | chr2.3:9458568-9458587 | MS.gene028844:CDS | 45.0% | |
GACTCACCAACAGAAGTTGT+TGG | - | chr2.3:9458846-9458865 | None:intergenic | 45.0% | |
GTGATTATGATGATCCACCG+AGG | - | chr2.3:9459192-9459211 | None:intergenic | 45.0% | |
GTTAATTCGCCTGCGTTTCT+AGG | + | chr2.3:9459074-9459093 | MS.gene028844:CDS | 45.0% | |
TACCTGTTGCCCTTACAATG+TGG | - | chr2.3:9458431-9458450 | None:intergenic | 45.0% | |
TATTCCAATTGCCGATGCCT+CGG | + | chr2.3:9459172-9459191 | MS.gene028844:CDS | 45.0% | |
TCAAGGAGGCCACATTGTAA+GGG | + | chr2.3:9458419-9458438 | MS.gene028844:CDS | 45.0% | |
TCCTCACCTTGAATTCTAGC+AGG | - | chr2.3:9459293-9459312 | None:intergenic | 45.0% | |
TCCTGCTAGAATTCAAGGTG+AGG | + | chr2.3:9459289-9459308 | MS.gene028844:CDS | 45.0% | |
TTCAAGGAGGCCACATTGTA+AGG | + | chr2.3:9458418-9458437 | MS.gene028844:CDS | 45.0% | |
! | ACGGAGTGATGGTGAAAAAC+TGG | - | chr2.3:9459141-9459160 | None:intergenic | 45.0% |
ATGATGATCCACCGAGGCAT+CGG | - | chr2.3:9459186-9459205 | None:intergenic | 50.0% | |
TCATTCCAAGGACGGAGTGA+TGG | - | chr2.3:9459152-9459171 | None:intergenic | 50.0% | |
TTTCACCATCACTCCGTCCT+TGG | + | chr2.3:9459144-9459163 | MS.gene028844:CDS | 50.0% | |
! | ATGGGAATGAAGAGCACAGG+AGG | + | chr2.3:9458381-9458400 | MS.gene028844:CDS | 50.0% |
! | TGCGTTTCTAGGCCAAGGTT+CGG | + | chr2.3:9459085-9459104 | MS.gene028844:CDS | 50.0% |
!! | TTCGGCTTTTTCCGCCCATA+GGG | + | chr2.3:9459103-9459122 | MS.gene028844:CDS | 50.0% |
AATCGAACACGTCGATCGCG+AGG | - | chr2.3:9458492-9458511 | None:intergenic | 55.0% | |
CAAGGTGAGGATGAGAGCCA+TGG | + | chr2.3:9459302-9459321 | MS.gene028844:CDS | 55.0% | |
GAACCTTGGCCTAGAAACGC+AGG | - | chr2.3:9459086-9459105 | None:intergenic | 55.0% | |
GAGGATGAGAGCCATGGAGT+TGG | + | chr2.3:9459308-9459327 | MS.gene028844:CDS | 55.0% | |
GCCTTTCGGAACCAACTCCA+TGG | - | chr2.3:9459322-9459341 | None:intergenic | 55.0% | |
GGCCACATTGTAAGGGCAAC+AGG | + | chr2.3:9458426-9458445 | MS.gene028844:CDS | 55.0% | |
! | GCCATGGAGTTGGTTCCGAA+AGG | + | chr2.3:9459318-9459337 | MS.gene028844:CDS | 55.0% |
!! | GTTCGGCTTTTTCCGCCCAT+AGG | + | chr2.3:9459102-9459121 | MS.gene028844:CDS | 55.0% |
!! | TCGGCTTTTTCCGCCCATAG+GGG | + | chr2.3:9459104-9459123 | MS.gene028844:CDS | 55.0% |
GGACTGAAGGGTCCCCCTAT+GGG | - | chr2.3:9459120-9459139 | None:intergenic | 60.0% | |
GGGCGGAAAAAGCCGAACCT+TGG | - | chr2.3:9459100-9459119 | None:intergenic | 60.0% | |
TCCAATTGCCGATGCCTCGG+TGG | + | chr2.3:9459175-9459194 | MS.gene028844:CDS | 60.0% | |
TGGACTGAAGGGTCCCCCTA+TGG | - | chr2.3:9459121-9459140 | None:intergenic | 60.0% | |
! | TCGCCTGCGTTTCTAGGCCA+AGG | + | chr2.3:9459080-9459099 | MS.gene028844:CDS | 60.0% |
!! | CGGCTTTTTCCGCCCATAGG+GGG | + | chr2.3:9459105-9459124 | MS.gene028844:CDS | 60.0% |
!! | TCCACCGAGGCATCGGCAAT+TGG | - | chr2.3:9459179-9459198 | None:intergenic | 60.0% |
CTGAAGGGTCCCCCTATGGG+CGG | - | chr2.3:9459117-9459136 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 9458381 | 9459370 | 9458381 | ID=MS.gene028844 |
chr2.3 | mRNA | 9458381 | 9459370 | 9458381 | ID=MS.gene028844.t1;Parent=MS.gene028844 |
chr2.3 | exon | 9458381 | 9459370 | 9458381 | ID=MS.gene028844.t1.exon1;Parent=MS.gene028844.t1 |
chr2.3 | CDS | 9458381 | 9459370 | 9458381 | ID=cds.MS.gene028844.t1;Parent=MS.gene028844.t1 |
Gene Sequence |
Protein sequence |