AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028961

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028961.t1 MTR_1g042700 93.158 190 13 0 1 190 151 340 1.29e-127 369
MS.gene028961.t1 MTR_1g442790 86.316 190 26 0 1 190 146 335 8.53e-119 346
MS.gene028961.t1 MTR_1g442790 86.316 190 26 0 1 190 146 335 1.40e-118 347
MS.gene028961.t1 MTR_1g075880 78.421 190 40 1 1 190 153 341 8.28e-109 322
MS.gene028961.t1 MTR_1g069735 77.368 190 41 2 1 190 156 343 1.41e-106 313
MS.gene028961.t1 MTR_1g069735 77.368 190 41 2 1 190 156 343 3.53e-106 313
MS.gene028961.t1 MTR_7g097150 77.895 190 40 2 1 190 156 343 1.21e-105 313
MS.gene028961.t1 MTR_1g069735 77.368 190 41 2 1 190 156 343 1.61e-105 314
MS.gene028961.t1 MTR_2g040150 64.500 200 58 4 1 190 149 345 2.22e-83 256
MS.gene028961.t1 MTR_3g104700 62.814 199 63 3 1 190 130 326 1.65e-82 253
MS.gene028961.t1 MTR_3g104700 62.814 199 63 3 1 190 130 326 5.48e-82 252
MS.gene028961.t1 MTR_1g019340 62.176 193 67 3 1 190 144 333 9.65e-79 242
MS.gene028961.t1 MTR_1g019340 62.176 193 67 3 1 190 144 333 2.59e-78 243
MS.gene028961.t1 MTR_4g035835 41.237 194 94 5 1 190 795 972 1.07e-37 138
MS.gene028961.t1 MTR_5g069000 40.722 194 95 5 1 190 799 976 1.90e-37 137
MS.gene028961.t1 MTR_6g470940 39.062 192 102 4 1 190 913 1091 2.93e-36 134
MS.gene028961.t1 MTR_4g107280 31.053 190 88 2 1 190 132 278 2.34e-28 109
MS.gene028961.t1 MTR_1g090917 36.628 172 77 2 6 177 92 231 6.74e-28 109
MS.gene028961.t1 MTR_1g090917 36.628 172 77 2 6 177 92 231 7.00e-28 109
MS.gene028961.t1 MTR_7g073520 29.474 190 91 2 1 190 184 330 3.46e-25 101
MS.gene028961.t1 MTR_2g095980 35.417 192 113 4 1 189 409 592 4.06e-25 102
MS.gene028961.t1 MTR_2g095980 35.417 192 113 4 1 189 664 847 4.63e-25 102
MS.gene028961.t1 MTR_2g095980 35.417 192 113 4 1 189 664 847 5.53e-25 101
MS.gene028961.t1 MTR_2g062850 28.959 221 125 5 1 189 207 427 1.87e-24 100
MS.gene028961.t1 MTR_8g070530 32.984 191 111 2 1 189 635 810 2.59e-24 99.8
MS.gene028961.t1 MTR_4g061610 33.333 195 105 4 1 189 676 851 4.90e-23 96.3
MS.gene028961.t1 MTR_2g069990 28.426 197 128 3 1 189 132 323 3.15e-22 93.6
MS.gene028961.t1 MTR_8g006870 29.018 224 123 5 1 190 408 629 8.32e-22 92.4
MS.gene028961.t1 MTR_7g033640 27.753 227 122 6 4 190 273 497 2.02e-21 91.3
MS.gene028961.t1 MTR_6g004720 28.251 223 125 6 1 190 289 509 2.69e-21 90.9
MS.gene028961.t1 MTR_7g081665 30.137 219 118 7 4 189 405 621 3.94e-21 90.5
MS.gene028961.t1 MTR_7g104180 29.224 219 123 7 4 190 533 751 3.96e-21 90.5
MS.gene028961.t1 MTR_4g113790 27.111 225 129 3 1 190 134 358 1.51e-20 88.6
MS.gene028961.t1 MTR_1g060790 27.027 222 124 5 4 190 511 729 1.84e-20 88.6
MS.gene028961.t1 MTR_4g107280 30.065 153 64 2 38 190 130 239 2.74e-20 87.4
MS.gene028961.t1 MTR_2g027240 27.556 225 123 5 4 189 245 468 2.82e-20 88.2
MS.gene028961.t1 MTR_4g131060 29.947 187 89 4 5 190 58 203 3.59e-20 87.4
MS.gene028961.t1 MTR_3g010260 28.378 222 121 6 4 189 456 675 1.50e-19 86.3
MS.gene028961.t1 MTR_1g077800 37.615 109 66 1 3 109 51 159 1.70e-19 85.9
MS.gene028961.t1 MTR_1g077800 37.615 109 66 1 3 109 51 159 2.46e-19 85.5
MS.gene028961.t1 MTR_4g029020 28.796 191 94 4 1 190 48 197 3.19e-19 84.7
MS.gene028961.t1 MTR_8g446990 26.009 223 129 3 1 189 170 390 3.96e-19 84.7
MS.gene028961.t1 MTR_2g085065 26.244 221 131 5 1 190 130 349 1.20e-18 83.2
MS.gene028961.t1 MTR_8g011780 25.943 212 125 5 5 190 70 275 2.69e-18 82.0
MS.gene028961.t1 MTR_2g049790 28.022 182 91 3 1 182 59 200 3.46e-18 82.0
MS.gene028961.t1 MTR_5g075100 27.807 187 94 3 5 190 63 209 3.66e-18 81.6
MS.gene028961.t1 MTR_1g090917 34.058 138 59 2 40 177 1 106 4.65e-18 80.9
MS.gene028961.t1 MTR_4g114670 29.189 185 88 3 7 190 53 195 5.80e-18 80.9
MS.gene028961.t1 MTR_1g090917 34.058 138 59 2 40 177 1 106 5.89e-18 80.9
MS.gene028961.t1 MTR_4g114670 28.796 191 93 3 1 190 47 195 6.59e-18 80.9
MS.gene028961.t1 MTR_2g016340 29.947 187 89 5 5 190 52 197 1.50e-17 80.1
MS.gene028961.t1 MTR_8g086380 30.366 191 91 6 1 190 62 211 2.45e-17 79.7
MS.gene028961.t1 MTR_7g053200 25.121 207 134 3 5 190 60 266 2.69e-17 79.3
MS.gene028961.t1 MTR_7g072575 29.412 187 90 4 5 190 52 197 2.70e-17 79.3
MS.gene028961.t1 MTR_3g466480 29.474 190 88 5 5 193 61 205 7.38e-17 78.2
MS.gene028961.t1 MTR_3g466400 27.807 187 93 4 5 190 54 199 7.40e-17 78.2
MS.gene028961.t1 MTR_1g103760 26.230 183 93 3 10 191 57 198 1.03e-16 77.8
MS.gene028961.t1 MTR_7g113490 27.128 188 97 2 3 190 111 258 2.06e-16 77.0
MS.gene028961.t1 MTR_2g018990 27.835 194 124 4 13 190 137 330 2.31e-16 76.6
MS.gene028961.t1 MTR_6g006770 26.178 191 99 5 3 190 52 203 3.86e-16 76.3
MS.gene028961.t1 MTR_2g020380 27.586 174 89 1 4 177 37 173 4.27e-16 76.3
MS.gene028961.t1 MTR_4g065080 25.238 210 123 5 13 189 70 278 4.66e-16 75.5
MS.gene028961.t1 MTR_5g088350 27.749 191 97 4 1 190 49 199 7.89e-16 75.1
MS.gene028961.t1 MTR_5g088350 27.749 191 97 4 1 190 49 199 8.42e-16 74.3
MS.gene028961.t1 MTR_8g024590 26.923 182 91 2 1 182 53 192 9.02e-16 74.7
MS.gene028961.t1 MTR_8g024600 26.923 182 91 2 1 182 53 192 9.30e-16 74.7
MS.gene028961.t1 MTR_5g088350 27.749 191 97 4 1 190 49 199 1.18e-15 74.7
MS.gene028961.t1 MTR_1g076370 29.299 157 70 3 25 181 82 197 1.86e-15 73.9
MS.gene028961.t1 MTR_8g089420 25.510 196 128 4 13 190 133 328 2.00e-15 73.9
MS.gene028961.t1 MTR_5g075060 26.882 186 94 4 6 190 53 197 2.14e-15 73.9
MS.gene028961.t1 MTR_1g013700 29.412 187 90 5 5 190 53 198 2.31e-15 73.6
MS.gene028961.t1 MTR_2g100030 27.749 191 112 5 3 190 55 222 2.41e-15 73.9
MS.gene028961.t1 MTR_8g035890 42.857 84 48 0 25 108 76 159 6.34e-15 71.6
MS.gene028961.t1 MTR_5g067150 27.473 182 89 4 10 190 54 193 8.28e-15 72.0
MS.gene028961.t1 MTR_5g045190 34.579 107 69 1 8 113 280 386 9.34e-15 72.4
MS.gene028961.t1 MTR_3g099920 27.273 187 88 4 8 193 62 201 9.81e-15 72.0
MS.gene028961.t1 MTR_5g067150 28.108 185 86 5 10 193 54 192 9.93e-15 71.6
MS.gene028961.t1 MTR_5g067150 28.108 185 86 5 10 193 54 192 1.04e-14 72.0
MS.gene028961.t1 MTR_8g024600 31.034 145 58 2 38 182 7 109 1.22e-14 71.2
MS.gene028961.t1 MTR_8g098425 37.374 99 62 0 13 111 458 556 2.17e-14 71.2
MS.gene028961.t1 MTR_6g012990 33.981 103 68 0 8 110 62 164 2.20e-14 70.5
MS.gene028961.t1 MTR_6g012990 33.981 103 68 0 8 110 62 164 2.31e-14 70.9
MS.gene028961.t1 MTR_1g105290 25.000 188 101 2 3 190 98 245 3.04e-14 70.5
MS.gene028961.t1 MTR_4g006970 28.649 185 90 5 7 190 62 205 3.10e-14 70.5
MS.gene028961.t1 MTR_1g105290 25.134 187 100 2 4 190 99 245 4.17e-14 70.1
MS.gene028961.t1 MTR_4g005730 27.174 184 92 5 10 190 67 211 4.34e-14 70.1
MS.gene028961.t1 MTR_4g005730 27.174 184 92 5 10 190 67 211 4.37e-14 70.1
MS.gene028961.t1 MTR_4g005730 27.174 184 92 5 10 190 67 211 4.50e-14 70.1
MS.gene028961.t1 MTR_1g105290 25.134 187 100 2 4 190 99 245 4.93e-14 70.1
MS.gene028961.t1 MTR_2g078740 33.645 107 71 0 7 113 55 161 4.94e-14 70.1
MS.gene028961.t1 MTR_2g078740 33.645 107 71 0 7 113 55 161 4.94e-14 70.1
MS.gene028961.t1 MTR_2g078740 33.645 107 71 0 7 113 55 161 4.99e-14 70.1
MS.gene028961.t1 MTR_3g110405 34.259 108 70 1 2 108 73 180 5.40e-14 68.9
MS.gene028961.t1 MTR_3g072320 27.461 193 94 5 1 193 48 194 6.19e-14 69.7
MS.gene028961.t1 MTR_8g040300 39.286 84 51 0 25 108 70 153 1.06e-13 68.2
MS.gene028961.t1 MTR_6g048250 33.010 103 69 0 8 110 62 164 1.17e-13 68.9
MS.gene028961.t1 MTR_6g048250 33.010 103 69 0 8 110 62 164 1.19e-13 68.6
MS.gene028961.t1 MTR_3g096230 26.705 176 85 3 16 190 297 429 1.34e-13 68.6
MS.gene028961.t1 MTR_3g096230 26.705 176 85 3 16 190 297 429 1.40e-13 68.6
MS.gene028961.t1 MTR_6g048250 33.010 103 69 0 8 110 62 164 1.40e-13 68.6
MS.gene028961.t1 MTR_1g100250 36.364 99 63 0 13 111 461 559 1.75e-13 68.6
MS.gene028961.t1 MTR_2g105010 26.923 182 91 4 10 190 59 199 8.43e-13 66.2
MS.gene028961.t1 MTR_2g040265 77.419 31 7 0 161 191 1 31 9.24e-13 62.4
MS.gene028961.t1 MTR_8g024100 23.757 181 92 3 13 190 62 199 1.07e-12 66.2
MS.gene028961.t1 MTR_1g040875 28.743 167 77 4 25 190 85 210 1.40e-12 65.9
MS.gene028961.t1 MTR_5g059880 25.000 180 88 3 13 190 241 375 1.82e-12 65.5
MS.gene028961.t1 MTR_7g116390 36.471 85 52 2 25 108 77 160 2.42e-12 64.3
MS.gene028961.t1 MTR_5g059940 31.776 107 72 1 7 113 168 273 2.61e-12 64.7
MS.gene028961.t1 MTR_5g060350 32.673 101 67 1 13 113 370 469 2.91e-12 64.7
MS.gene028961.t1 MTR_6g012980 30.189 106 74 0 8 113 116 221 4.49e-12 64.3
MS.gene028961.t1 MTR_4g019410 24.194 186 95 2 8 190 61 203 4.54e-12 64.3
MS.gene028961.t1 MTR_4g094415 32.353 102 68 1 10 111 210 310 4.54e-12 64.3
MS.gene028961.t1 MTR_4g019410 24.194 186 95 2 8 190 61 203 4.87e-12 64.3
MS.gene028961.t1 MTR_4g094415 32.039 103 69 1 10 112 210 311 5.30e-12 63.9
MS.gene028961.t1 MTR_3g095620 32.692 104 67 1 13 113 72 175 6.21e-12 63.2
MS.gene028961.t1 MTR_8g093730 33.333 105 70 0 7 111 343 447 6.60e-12 63.9
MS.gene028961.t1 MTR_5g022030 32.727 110 68 3 7 110 141 250 8.31e-12 63.5
MS.gene028961.t1 MTR_5g022030 32.727 110 68 3 7 110 141 250 9.53e-12 63.2
MS.gene028961.t1 MTR_2g040180 75.862 29 7 0 161 189 1 29 1.41e-11 59.7
MS.gene028961.t1 MTR_8g088740 28.767 146 60 3 37 182 72 173 1.63e-11 60.8
MS.gene028961.t1 MTR_4g128820 25.946 185 89 4 10 193 55 192 2.62e-11 62.0
MS.gene028961.t1 MTR_5g059910 32.353 102 68 1 10 111 177 277 2.87e-11 61.6
MS.gene028961.t1 MTR_1g105600 36.283 113 66 3 4 111 636 747 3.32e-11 62.0
MS.gene028961.t1 MTR_4g125800 37.383 107 62 3 25 128 75 179 3.58e-11 61.2
MS.gene028961.t1 MTR_5g091880 29.167 120 82 1 6 122 203 322 3.59e-11 61.6
MS.gene028961.t1 MTR_4g125800 39.796 98 54 3 25 119 128 223 3.70e-11 61.2
MS.gene028961.t1 MTR_4g125800 39.796 98 54 3 25 119 151 246 3.70e-11 61.6
MS.gene028961.t1 MTR_4g075410 25.137 183 93 3 10 190 64 204 4.02e-11 61.6
MS.gene028961.t1 MTR_4g075410 25.137 183 93 3 10 190 64 204 4.29e-11 61.6
MS.gene028961.t1 MTR_5g008860 35.514 107 65 3 7 110 181 286 4.82e-11 61.2
MS.gene028961.t1 MTR_4g074875 24.590 183 94 3 10 190 64 204 5.44e-11 61.2
MS.gene028961.t1 MTR_4g074875 24.590 183 94 3 10 190 64 204 5.80e-11 61.2
MS.gene028961.t1 MTR_1g026160 33.000 100 65 2 13 111 189 287 5.82e-11 60.8
MS.gene028961.t1 MTR_1g026160 33.000 100 65 2 13 111 191 289 6.18e-11 60.8
MS.gene028961.t1 MTR_1g026160 33.000 100 65 2 13 111 189 287 6.58e-11 60.5
MS.gene028961.t1 MTR_4g078290 32.143 112 72 3 7 115 170 280 6.79e-11 60.8
MS.gene028961.t1 MTR_5g058090 37.391 115 66 3 4 113 621 734 6.86e-11 60.8
MS.gene028961.t1 MTR_4g078290 32.143 112 72 3 7 115 170 280 6.92e-11 60.8
MS.gene028961.t1 MTR_1g026160 26.257 179 87 5 13 190 336 470 7.36e-11 60.8
MS.gene028961.t1 MTR_1g026160 26.257 179 87 5 13 190 336 470 7.73e-11 60.8
MS.gene028961.t1 MTR_1g026160 33.000 100 65 2 13 111 189 287 7.90e-11 60.5
MS.gene028961.t1 MTR_1g026160 33.000 100 65 2 13 111 191 289 8.01e-11 60.5
MS.gene028961.t1 MTR_5g033490 27.273 187 87 4 12 189 348 494 9.22e-11 60.5
MS.gene028961.t1 MTR_1g026160 33.000 100 65 2 13 111 191 289 9.88e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028961.t1 AT4G14350 78.421 190 40 1 1 190 155 343 2.29e-107 318
MS.gene028961.t1 AT4G14350 78.421 190 40 1 1 190 155 343 2.72e-107 318
MS.gene028961.t1 AT4G14350 78.421 190 40 1 1 190 155 343 2.72e-107 318
MS.gene028961.t1 AT4G14350 78.421 190 40 1 1 190 155 343 2.72e-107 318
MS.gene028961.t1 AT3G23310 77.604 192 40 2 1 190 156 346 3.16e-105 313
MS.gene028961.t1 AT2G20470 72.105 190 50 2 1 190 160 346 1.18e-98 295
MS.gene028961.t1 AT2G20470 72.105 190 50 2 1 190 160 346 5.69e-98 295
MS.gene028961.t1 AT2G20470 72.105 190 50 2 1 190 160 346 5.69e-98 295
MS.gene028961.t1 AT1G03920 73.684 190 48 2 1 190 60 247 5.82e-97 289
MS.gene028961.t1 AT1G03920 73.684 190 48 2 1 190 173 360 4.74e-96 290
MS.gene028961.t1 AT1G03920 73.684 190 48 2 1 190 173 360 4.74e-96 290
MS.gene028961.t1 AT2G19400 65.152 198 60 3 1 190 141 337 4.50e-83 255
MS.gene028961.t1 AT4G33080 64.141 198 62 3 1 190 130 326 4.92e-83 255
MS.gene028961.t1 AT4G33080 64.141 198 62 3 1 190 130 326 5.01e-83 254
MS.gene028961.t1 AT1G30640 64.433 194 64 3 1 190 63 255 1.43e-82 252
MS.gene028961.t1 AT1G30640 64.433 194 64 3 1 190 156 348 4.04e-82 254
MS.gene028961.t1 AT1G30640 64.433 194 64 3 1 190 156 348 4.04e-82 254
MS.gene028961.t1 AT5G09890 62.755 196 63 4 1 190 138 329 2.25e-77 240
MS.gene028961.t1 AT5G09890 62.755 196 63 4 1 190 138 329 2.40e-77 240
MS.gene028961.t1 AT5G62310 41.579 190 100 4 1 190 790 968 4.55e-38 139
MS.gene028961.t1 AT3G17850 40.000 190 103 4 1 190 918 1096 1.29e-37 138
MS.gene028961.t1 AT1G48490 38.421 190 100 3 1 190 864 1036 3.96e-36 134
MS.gene028961.t1 AT1G48490 38.421 190 100 3 1 190 864 1036 3.96e-36 134
MS.gene028961.t1 AT1G48490 38.421 190 100 3 1 190 864 1036 3.96e-36 134
MS.gene028961.t1 AT1G48490 38.421 190 100 3 1 190 865 1037 4.08e-36 134
MS.gene028961.t1 AT1G45160 38.542 192 101 5 1 191 706 881 6.07e-35 130
MS.gene028961.t1 AT1G45160 38.542 192 101 5 1 191 706 881 6.71e-35 130
MS.gene028961.t1 AT5G04510 36.047 172 78 2 6 177 85 224 2.26e-29 110
MS.gene028961.t1 AT5G04510 36.047 172 78 2 6 177 85 224 1.63e-28 110
MS.gene028961.t1 AT5G04510 36.047 172 78 2 6 177 85 224 2.99e-28 110
MS.gene028961.t1 AT3G10540 36.047 172 78 2 6 177 86 225 1.24e-27 108
MS.gene028961.t1 AT3G08730 29.474 190 91 2 1 190 170 316 1.38e-25 102
MS.gene028961.t1 AT3G08730 29.474 190 91 2 1 190 170 316 1.38e-25 102
MS.gene028961.t1 AT3G08720 29.947 187 88 2 4 190 179 322 2.50e-25 102
MS.gene028961.t1 AT3G08720 29.947 187 88 2 4 190 179 322 2.50e-25 102
MS.gene028961.t1 AT3G08720 29.947 187 88 2 4 190 179 322 2.50e-25 102
MS.gene028961.t1 AT3G08720 29.947 187 88 2 4 190 179 322 2.50e-25 102
MS.gene028961.t1 AT5G58140 32.461 191 112 3 1 189 613 788 1.83e-24 100
MS.gene028961.t1 AT3G45780 33.673 196 105 5 1 189 699 876 2.09e-24 100
MS.gene028961.t1 AT3G45780 33.673 196 105 5 1 189 699 876 2.09e-24 100
MS.gene028961.t1 AT5G58140 32.461 191 112 3 1 189 613 788 2.39e-24 100
MS.gene028961.t1 AT5G58140 32.461 191 112 3 1 189 613 788 2.39e-24 100
MS.gene028961.t1 AT5G58140 32.461 191 112 3 1 189 613 788 2.39e-24 100
MS.gene028961.t1 AT5G58140 32.461 191 112 3 1 189 613 788 2.39e-24 100
MS.gene028961.t1 AT5G58140 32.461 191 112 3 1 189 613 788 2.39e-24 100
MS.gene028961.t1 AT1G16440 28.638 213 127 5 1 190 151 361 4.65e-24 98.6
MS.gene028961.t1 AT5G55910 30.131 229 119 6 1 190 145 371 1.25e-23 97.4
MS.gene028961.t1 AT5G55910 30.131 229 119 6 1 190 145 371 1.25e-23 97.4
MS.gene028961.t1 AT5G47750 28.696 230 112 5 4 189 230 451 7.94e-23 95.5
MS.gene028961.t1 AT4G26610 29.148 223 125 4 1 190 159 381 2.25e-22 94.0
MS.gene028961.t1 AT1G79250 28.319 226 124 5 1 190 182 405 2.77e-22 94.0
MS.gene028961.t1 AT1G79250 28.319 226 124 5 1 190 182 405 2.77e-22 94.0
MS.gene028961.t1 AT1G79250 28.319 226 124 5 1 190 182 405 2.77e-22 94.0
MS.gene028961.t1 AT1G79250 28.319 226 124 5 1 190 182 405 2.77e-22 94.0
MS.gene028961.t1 AT3G52890 29.565 230 117 7 4 190 577 804 4.88e-22 93.2
MS.gene028961.t1 AT3G52890 29.565 230 117 7 4 190 577 804 4.88e-22 93.2
MS.gene028961.t1 AT3G52890 29.565 230 117 7 4 190 577 804 4.88e-22 93.2
MS.gene028961.t1 AT3G52890 29.565 230 117 7 4 190 577 804 4.88e-22 93.2
MS.gene028961.t1 AT2G44830 26.818 220 127 3 4 189 402 621 7.91e-22 92.8
MS.gene028961.t1 AT2G44830 26.818 220 127 3 4 189 402 621 7.91e-22 92.8
MS.gene028961.t1 AT2G44830 26.818 220 127 3 4 189 402 621 7.91e-22 92.8
MS.gene028961.t1 AT2G36350 28.947 228 119 7 4 190 598 823 1.48e-21 92.0
MS.gene028961.t1 AT3G12690 26.636 214 133 4 1 190 221 434 2.40e-21 91.3
MS.gene028961.t1 AT3G12690 26.636 214 133 4 1 190 221 434 2.40e-21 91.3
MS.gene028961.t1 AT3G12690 26.636 214 133 4 1 190 221 434 2.40e-21 91.3
MS.gene028961.t1 AT3G27580 27.876 226 125 5 1 190 218 441 7.33e-21 89.7
MS.gene028961.t1 AT3G27580 27.876 226 125 5 1 190 218 441 7.33e-21 89.7
MS.gene028961.t1 AT3G44610 26.667 225 129 6 1 190 115 338 1.52e-20 88.6
MS.gene028961.t1 AT3G20830 32.632 190 108 5 20 189 79 268 4.56e-20 87.0
MS.gene028961.t1 AT4G24400 29.319 191 92 4 1 190 45 193 1.86e-19 85.5
MS.gene028961.t1 AT4G24400 29.319 191 92 4 1 190 45 193 2.28e-19 85.1
MS.gene028961.t1 AT3G14370 27.225 191 132 2 6 189 129 319 7.22e-19 84.0
MS.gene028961.t1 AT5G03640 27.391 230 116 6 4 189 580 802 9.30e-19 84.0
MS.gene028961.t1 AT5G03640 27.391 230 116 6 4 189 580 802 9.30e-19 84.0
MS.gene028961.t1 AT1G53700 25.758 198 134 3 1 189 130 323 9.76e-19 83.6
MS.gene028961.t1 AT4G13000 27.228 202 127 5 3 190 59 254 3.51e-18 81.6
MS.gene028961.t1 AT1G54960 27.273 187 96 2 4 190 112 258 3.80e-18 82.0
MS.gene028961.t1 AT1G54960 27.273 187 96 2 4 190 112 258 3.80e-18 82.0
MS.gene028961.t1 AT1G30270 27.568 185 93 4 7 190 73 217 4.59e-18 81.6
MS.gene028961.t1 AT5G35410 30.811 185 85 4 7 190 53 195 4.67e-18 81.3
MS.gene028961.t1 AT5G40030 25.000 220 135 3 1 190 150 369 5.23e-18 81.6
MS.gene028961.t1 AT4G14580 30.539 167 75 3 25 190 82 208 5.36e-18 81.3
MS.gene028961.t1 AT1G30270 27.568 185 93 4 7 190 73 217 5.50e-18 81.3
MS.gene028961.t1 AT2G26700 38.384 99 59 1 13 109 137 235 5.87e-18 81.3
MS.gene028961.t1 AT5G35410 30.811 185 85 4 7 190 53 195 7.25e-18 80.9
MS.gene028961.t1 AT5G25110 29.412 187 90 4 5 190 83 228 7.73e-18 80.9
MS.gene028961.t1 AT5G45810 28.796 191 94 4 1 190 64 213 8.28e-18 80.9
MS.gene028961.t1 AT4G30960 29.730 185 88 5 7 190 66 209 8.86e-18 80.9
MS.gene028961.t1 AT1G51170 30.208 192 118 5 14 189 76 267 8.94e-18 80.5
MS.gene028961.t1 AT2G26980 28.649 185 91 4 7 190 56 200 1.66e-17 78.6
MS.gene028961.t1 AT2G26980 28.272 191 96 4 1 190 50 200 1.91e-17 79.3
MS.gene028961.t1 AT2G26980 28.272 191 96 4 1 190 50 200 1.94e-17 79.7
MS.gene028961.t1 AT2G26980 28.272 191 96 4 1 190 60 210 2.07e-17 79.7
MS.gene028961.t1 AT4G18700 29.670 182 87 4 1 182 62 202 2.76e-17 79.3
MS.gene028961.t1 AT2G26980 28.649 185 91 4 7 190 56 200 2.80e-17 79.3
MS.gene028961.t1 AT2G34650 29.255 188 122 4 13 189 128 315 2.84e-17 79.3
MS.gene028961.t1 AT5G10930 28.877 187 91 4 5 190 53 198 3.07e-17 79.3
MS.gene028961.t1 AT1G30270 31.818 154 64 4 38 190 7 120 3.44e-17 79.0
MS.gene028961.t1 AT5G58380 28.877 187 91 3 5 190 52 197 5.29e-17 78.6
MS.gene028961.t1 AT1G09000 27.128 188 97 2 3 190 112 259 5.80e-17 78.6
MS.gene028961.t1 AT1G09000 27.128 188 97 2 3 190 112 259 6.38e-17 78.6
MS.gene028961.t1 AT5G01810 29.319 191 93 4 1 190 48 197 7.66e-17 77.8
MS.gene028961.t1 AT3G23000 30.539 167 74 4 25 190 86 211 7.91e-17 77.8
MS.gene028961.t1 AT5G01810 29.319 191 93 4 1 190 48 197 9.04e-17 77.8
MS.gene028961.t1 AT5G01810 29.319 191 93 4 1 190 48 197 9.04e-17 77.8
MS.gene028961.t1 AT2G25090 27.933 179 96 2 4 182 55 200 9.37e-17 77.8
MS.gene028961.t1 AT5G45820 30.000 190 87 5 5 193 52 196 1.16e-16 77.4
MS.gene028961.t1 AT1G29230 28.652 178 86 3 5 182 114 250 2.54e-16 76.6
MS.gene028961.t1 AT2G30360 27.027 185 90 4 10 193 67 207 2.57e-16 76.6
MS.gene028961.t1 AT5G14720 27.320 194 95 6 3 193 52 202 2.93e-16 76.6
MS.gene028961.t1 AT5G14720 27.320 194 95 6 3 193 52 202 2.93e-16 76.6
MS.gene028961.t1 AT1G01140 27.660 188 91 4 7 193 61 204 7.40e-16 75.1
MS.gene028961.t1 AT1G01140 27.660 188 91 4 7 193 61 204 8.12e-16 75.1
MS.gene028961.t1 AT5G18700 36.190 105 67 0 10 114 43 147 8.18e-16 75.5
MS.gene028961.t1 AT1G01140 27.660 188 91 4 7 193 61 204 8.25e-16 75.1
MS.gene028961.t1 AT2G45490 35.965 114 67 1 1 108 52 165 8.98e-16 73.6
MS.gene028961.t1 AT2G45490 35.965 114 67 1 1 108 52 165 1.16e-15 73.6
MS.gene028961.t1 AT4G24100 26.562 192 97 5 3 190 69 220 1.37e-15 74.7
MS.gene028961.t1 AT4G24100 26.562 192 97 5 3 190 69 220 1.37e-15 74.7
MS.gene028961.t1 AT4G24100 26.562 192 97 5 3 190 85 236 1.41e-15 74.7
MS.gene028961.t1 AT4G24100 26.562 192 97 5 3 190 85 236 1.45e-15 74.7
MS.gene028961.t1 AT4G10730 26.042 192 98 5 3 190 63 214 3.53e-15 73.6
MS.gene028961.t1 AT4G10730 26.042 192 98 5 3 190 83 234 3.91e-15 73.2
MS.gene028961.t1 AT1G70430 33.929 112 68 3 3 110 52 161 4.01e-15 73.2
MS.gene028961.t1 AT3G06030 26.064 188 99 2 3 190 111 258 4.10e-15 73.2
MS.gene028961.t1 AT1G70430 33.929 112 68 3 3 110 52 161 4.11e-15 73.2
MS.gene028961.t1 AT1G70430 33.929 112 68 3 3 110 52 161 4.46e-15 73.2
MS.gene028961.t1 AT5G21222 26.486 185 95 4 7 190 55 199 7.65e-15 72.4
MS.gene028961.t1 AT5G21222 26.486 185 95 4 7 190 55 199 7.65e-15 72.4
MS.gene028961.t1 AT5G21222 26.486 185 95 4 7 190 55 199 7.65e-15 72.4
MS.gene028961.t1 AT5G21222 26.486 185 95 4 7 190 55 199 7.65e-15 72.4
MS.gene028961.t1 AT5G21326 26.486 185 95 3 7 190 55 199 1.06e-14 72.0
MS.gene028961.t1 AT3G25250 26.904 197 124 4 10 190 69 261 2.50e-14 70.9
MS.gene028961.t1 AT3G01090 34.951 103 67 0 8 110 85 187 2.55e-14 70.9
MS.gene028961.t1 AT3G01090 34.951 103 67 0 8 110 62 164 2.79e-14 70.9
MS.gene028961.t1 AT3G01090 34.951 103 67 0 8 110 62 164 2.79e-14 70.9
MS.gene028961.t1 AT1G49180 33.043 115 74 1 2 113 43 157 6.60e-14 69.3
MS.gene028961.t1 AT1G49180 33.043 115 74 1 2 113 43 157 8.18e-14 69.3
MS.gene028961.t1 AT1G63700 32.407 108 73 0 4 111 441 548 9.59e-14 69.3
MS.gene028961.t1 AT1G63700 32.407 108 73 0 4 111 441 548 9.59e-14 69.3
MS.gene028961.t1 AT1G53570 35.238 105 68 0 7 111 258 362 1.23e-13 68.9
MS.gene028961.t1 AT1G53570 35.238 105 68 0 7 111 258 362 1.23e-13 68.9
MS.gene028961.t1 AT1G53570 35.238 105 68 0 7 111 258 362 1.23e-13 68.9
MS.gene028961.t1 AT1G53570 35.238 105 68 0 7 111 258 362 1.23e-13 68.9
MS.gene028961.t1 AT1G48260 26.374 182 93 4 10 190 56 197 1.50e-13 68.6
MS.gene028961.t1 AT4G14480 26.316 190 105 4 4 190 53 210 1.78e-13 68.6
MS.gene028961.t1 AT1G53570 37.374 99 62 0 13 111 264 362 2.48e-13 68.2
MS.gene028961.t1 AT1G53570 37.374 99 62 0 13 111 264 362 2.65e-13 67.8
MS.gene028961.t1 AT1G79640 27.174 184 92 5 10 190 56 200 3.34e-13 67.8
MS.gene028961.t1 AT3G29160 32.039 103 70 0 8 110 63 165 3.40e-13 67.4
MS.gene028961.t1 AT3G29160 32.353 102 69 0 8 109 63 164 3.46e-13 67.4
MS.gene028961.t1 AT3G29160 32.353 102 69 0 8 109 63 164 3.46e-13 67.4
MS.gene028961.t1 AT1G69220 33.645 107 70 1 8 113 263 369 3.69e-13 67.8
MS.gene028961.t1 AT1G79640 27.174 184 92 5 10 190 56 200 3.70e-13 67.4
MS.gene028961.t1 AT1G79640 27.174 184 92 5 10 190 56 200 3.70e-13 67.4
MS.gene028961.t1 AT1G79640 27.174 184 92 5 10 190 56 200 3.70e-13 67.4
MS.gene028961.t1 AT1G79640 27.174 184 92 5 10 190 59 203 3.71e-13 67.4
MS.gene028961.t1 AT1G79640 27.174 184 92 5 10 190 56 200 3.71e-13 67.4
MS.gene028961.t1 AT1G69220 26.738 187 90 4 8 193 290 430 3.93e-13 67.4
MS.gene028961.t1 AT3G15220 34.951 103 67 0 11 113 59 161 4.08e-13 67.4
MS.gene028961.t1 AT2G34180 27.273 187 94 4 5 190 97 242 4.45e-13 67.4
MS.gene028961.t1 AT2G38490 26.203 187 96 4 5 190 68 213 7.98e-13 66.2
MS.gene028961.t1 AT2G25880 32.456 114 71 1 1 108 68 181 1.13e-12 65.5
MS.gene028961.t1 AT2G25880 32.456 114 71 1 1 108 55 168 1.21e-12 65.5
MS.gene028961.t1 AT5G39440 25.414 181 92 3 10 190 64 201 1.36e-12 65.9
MS.gene028961.t1 AT4G32830 32.456 114 71 1 1 108 61 174 1.50e-12 65.1
MS.gene028961.t1 AT2G25880 32.456 114 71 1 1 108 116 229 1.51e-12 65.5
MS.gene028961.t1 AT3G61960 22.527 182 95 3 13 191 57 195 2.42e-12 65.1
MS.gene028961.t1 AT3G61960 22.527 182 95 3 13 191 57 195 2.51e-12 65.1
MS.gene028961.t1 AT1G53165 34.951 103 67 0 11 113 59 161 2.61e-12 65.1
MS.gene028961.t1 AT1G53165 34.951 103 67 0 11 113 59 161 2.65e-12 65.1
MS.gene028961.t1 AT1G53165 34.951 103 67 0 11 113 59 161 2.66e-12 65.1
MS.gene028961.t1 AT4G08500 32.381 105 70 1 7 111 376 479 4.24e-12 64.3
MS.gene028961.t1 AT2G37840 23.118 186 97 2 8 190 54 196 8.93e-12 63.5
MS.gene028961.t1 AT1G70430 35.789 95 55 3 20 110 4 96 9.51e-12 63.5
MS.gene028961.t1 AT5G07070 28.342 187 92 3 5 190 52 197 1.55e-11 62.8
MS.gene028961.t1 AT5G57630 27.320 194 92 6 1 193 48 193 1.97e-11 62.4
MS.gene028961.t1 AT5G57630 27.320 194 92 6 1 193 48 193 2.30e-11 62.0
MS.gene028961.t1 AT3G20860 25.000 180 90 3 13 190 51 187 3.14e-11 61.6
MS.gene028961.t1 AT1G23700 29.907 107 73 1 3 107 48 154 3.35e-11 61.6
MS.gene028961.t1 AT1G23700 29.907 107 73 1 3 107 48 154 3.91e-11 61.6
MS.gene028961.t1 AT1G23700 29.907 107 73 1 3 107 48 154 4.23e-11 61.6
MS.gene028961.t1 AT1G66750 35.238 105 68 0 13 117 60 164 4.39e-11 61.2
MS.gene028961.t1 AT4G12020 31.776 107 72 1 7 113 1661 1766 5.66e-11 61.2
MS.gene028961.t1 AT4G12020 31.776 107 72 1 7 113 1661 1766 5.66e-11 61.2
MS.gene028961.t1 AT4G10010 34.906 106 65 3 7 109 197 301 5.75e-11 61.2
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1669 1772 8.44e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1669 1772 8.44e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1669 1772 8.55e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1661 1764 8.76e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1594 1697 8.77e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1661 1764 8.79e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1669 1772 9.30e-11 60.8
MS.gene028961.t1 AT4G12020 31.429 105 71 1 7 111 1661 1764 9.75e-11 60.8

Find 42 sgRNAs with CRISPR-Local

Find 67 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACGTGAAATTATCAGATTT+TGG 0.253070 2.3:+11187167 MS.gene028961:CDS
CAAGCCCGGCAACTTGCTTC+TGG 0.283847 2.3:+11187133 MS.gene028961:CDS
CCAGTTGCTGCTGTTGTGAT+TGG 0.310492 2.3:-11187295 None:intergenic
ATGTTTATGAATAGACTCTA+TGG 0.331837 2.3:-11186857 None:intergenic
GATGAACCTAAGTTCTATAT+CGG 0.352019 2.3:+11186820 MS.gene028961:CDS
ATAAACATAATTATATTCAT+AGG 0.369736 2.3:+11186872 MS.gene028961:CDS
AACTTCTGGAGCAATATAAT+CGG 0.385695 2.3:-11187782 None:intergenic
TCTATCCAGAAGCAAGTTGC+CGG 0.399781 2.3:-11187138 None:intergenic
CCTCTCTTCAGAATAACTTC+TGG 0.412241 2.3:-11187796 None:intergenic
GCTAGACTGCTGTAACCTTC+AGG 0.412545 2.3:+11187202 MS.gene028961:CDS
AAGCAAGTTCATCACTTTGA+AGG 0.415965 2.3:-11187262 None:intergenic
CCAATCACAACAGCAGCAAC+TGG 0.428613 2.3:+11187295 MS.gene028961:CDS
CGAGTATTTATATCTCATAA+TGG 0.455404 2.3:+11186738 MS.gene028961:CDS
AGCAGCAACTGGAGCATTTG+CGG 0.457627 2.3:+11187306 MS.gene028961:CDS
ATGAACCTAAGTTCTATATC+GGG 0.460094 2.3:+11186821 MS.gene028961:CDS
TGCTATCAACTTCTGCAAGA+AGG 0.478344 2.3:-11186678 None:intergenic
GGGTGTTCCAACCGTAGAAT+AGG 0.479245 2.3:-11187761 None:intergenic
TCTAATGGAGTTAACATAAG+TGG 0.486303 2.3:+11187236 MS.gene028961:CDS
GATATTGCAGGCCTATTCTA+CGG 0.491719 2.3:+11187750 MS.gene028961:intron
TGCTGCTGTTGTGATTGGTT+AGG 0.492962 2.3:-11187290 None:intergenic
CAAAGTCATCATATCTCCAC+CGG 0.517058 2.3:-11186770 None:intergenic
TAAATACTCGTCATCTTGAA+AGG 0.518616 2.3:-11186725 None:intergenic
TTGCAGGCCTATTCTACGGT+TGG 0.530006 2.3:+11187754 MS.gene028961:intron
CTATCCAGAAGCAAGTTGCC+GGG 0.540506 2.3:-11187137 None:intergenic
GTTATTCTGAAGAGAGGGTA+TGG 0.540943 2.3:+11187802 MS.gene028961:CDS
CTCATAATGGAGTATCTACC+CGG 0.543468 2.3:+11186751 MS.gene028961:CDS
ACTTCTGGAGCAATATAATC+GGG 0.545377 2.3:-11187781 None:intergenic
AGAGATGCTTTGTAGAGGAC+AGG 0.547901 2.3:+11186553 None:intergenic
AACTTGCTTCTGGATAGAAA+TGG 0.553587 2.3:+11187143 MS.gene028961:CDS
GTGATTGGTATAATAGTGTA+TGG 0.555850 2.3:+11187833 MS.gene028961:CDS
GGTATGGCGTGGAATGTGAT+TGG 0.559029 2.3:+11187818 MS.gene028961:CDS
TTGAATATGTCAAATCTGAA+AGG 0.568344 2.3:+11186653 MS.gene028961:CDS
CCAGAAGTTATTCTGAAGAG+AGG 0.595321 2.3:+11187796 MS.gene028961:CDS
CAGAAGTTATTCTGAAGAGA+GGG 0.602815 2.3:+11187797 MS.gene028961:CDS
GTCTCCCCGATATAGAACTT+AGG 0.604188 2.3:-11186826 None:intergenic
ATATGATGACTTTGCTGATG+CGG 0.616222 2.3:+11186779 MS.gene028961:CDS
AAATCAGAGATGCTTTGTAG+AGG 0.633027 2.3:+11186548 None:intergenic
TGAAGGTTACAGCAGTCTAG+CGG 0.655366 2.3:-11187200 None:intergenic
TGAACCTAAGTTCTATATCG+GGG 0.670357 2.3:+11186822 MS.gene028961:CDS
AAAGTCATCATATCTCCACC+GGG 0.678007 2.3:-11186769 None:intergenic
TCTGAAGAGAGGGTATGGCG+TGG 0.686438 2.3:+11187807 MS.gene028961:CDS
ATAATGGAGTATCTACCCGG+TGG 0.717919 2.3:+11186754 MS.gene028961:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAACATAATTATATTCAT+AGG + chr2.3:11186872-11186891 MS.gene028961:CDS 10.0%
!!! TTTTTATTTTAACTGAAAAA+AGG - chr2.3:11187518-11187537 None:intergenic 10.0%
!! TAGCAAACTTTATTATAAAA+CGG + chr2.3:11187416-11187435 MS.gene028961:intron 15.0%
!!! ATTATTTTCTTTTACTTATC+AGG + chr2.3:11186608-11186627 MS.gene028961:intron 15.0%
!! ATTTACATCGTATATCAATT+TGG + chr2.3:11187621-11187640 MS.gene028961:intron 20.0%
!! TATGATTACTTTATTCAAAG+CGG + chr2.3:11187486-11187505 MS.gene028961:intron 20.0%
!! TTTACATCGTATATCAATTT+GGG + chr2.3:11187622-11187641 MS.gene028961:intron 20.0%
!!! TCTTTCGTTATATTTTTGTT+TGG + chr2.3:11187575-11187594 MS.gene028961:intron 20.0%
! AACACATTCATAAATAAGCA+TGG + chr2.3:11187366-11187385 MS.gene028961:intron 25.0%
! AGTGATTTCGTTGAAAATAA+CGG - chr2.3:11186976-11186995 None:intergenic 25.0%
! ATGTTTATGAATAGACTCTA+TGG - chr2.3:11186860-11186879 None:intergenic 25.0%
! CATTATTCTTTCGTTATGTT+TGG + chr2.3:11187544-11187563 MS.gene028961:intron 25.0%
! CGAGTATTTATATCTCATAA+TGG + chr2.3:11186738-11186757 MS.gene028961:CDS 25.0%
! TTGAATATGTCAAATCTGAA+AGG + chr2.3:11186653-11186672 MS.gene028961:CDS 25.0%
!! AATTTTCAGTGTTAGATTGT+AGG + chr2.3:11187006-11187025 MS.gene028961:intron 25.0%
!! ATTTTCAGTGTTAGATTGTA+GGG + chr2.3:11187007-11187026 MS.gene028961:intron 25.0%
!!! GTGCTTTTATGTTTTTGATT+AGG + chr2.3:11186630-11186649 MS.gene028961:intron 25.0%
!!! TATTCTCTCTTTTGATTGTA+TGG + chr2.3:11187675-11187694 MS.gene028961:intron 25.0%
!!! TTTTAACTGAAAAAAGGTGT+AGG - chr2.3:11187512-11187531 None:intergenic 25.0%
ATGAACCTAAGTTCTATATC+GGG + chr2.3:11186821-11186840 MS.gene028961:CDS 30.0%
CAGGAAAAAGACTTATCTAA+TGG + chr2.3:11187221-11187240 MS.gene028961:CDS 30.0%
GATGAACCTAAGTTCTATAT+CGG + chr2.3:11186820-11186839 MS.gene028961:CDS 30.0%
GTGATTGGTATAATAGTGTA+TGG + chr2.3:11187833-11187852 MS.gene028961:CDS 30.0%
TAAATACTCGTCATCTTGAA+AGG - chr2.3:11186728-11186747 None:intergenic 30.0%
TCTAATGGAGTTAACATAAG+TGG + chr2.3:11187236-11187255 MS.gene028961:CDS 30.0%
TTCTATCTTTGTGATATTGC+AGG + chr2.3:11187738-11187757 MS.gene028961:intron 30.0%
! CAACGAAATCACTATTGTTT+TGG + chr2.3:11186983-11187002 MS.gene028961:intron 30.0%
! CACGTGAAATTATCAGATTT+TGG + chr2.3:11187167-11187186 MS.gene028961:CDS 30.0%
! TAGATAAGTCTTTTTCCTGA+AGG - chr2.3:11187220-11187239 None:intergenic 30.0%
!! AACTTCTGGAGCAATATAAT+CGG - chr2.3:11187785-11187804 None:intergenic 30.0%
AAGCAAGTTCATCACTTTGA+AGG - chr2.3:11187265-11187284 None:intergenic 35.0%
AATGAATACCTCCGAATGAT+CGG - chr2.3:11187063-11187082 None:intergenic 35.0%
ATATGATGACTTTGCTGATG+CGG + chr2.3:11186779-11186798 MS.gene028961:CDS 35.0%
CTTTCGTTATGTTTGGACTT+CGG + chr2.3:11187551-11187570 MS.gene028961:intron 35.0%
TGAACCTAAGTTCTATATCG+GGG + chr2.3:11186822-11186841 MS.gene028961:CDS 35.0%
! AACTTGCTTCTGGATAGAAA+TGG + chr2.3:11187143-11187162 MS.gene028961:CDS 35.0%
! CAGAAGTTATTCTGAAGAGA+GGG + chr2.3:11187797-11187816 MS.gene028961:CDS 35.0%
! TTTTACAGAGATATCAAGCC+CGG + chr2.3:11187119-11187138 MS.gene028961:intron 35.0%
!! ACTTCTGGAGCAATATAATC+GGG - chr2.3:11187784-11187803 None:intergenic 35.0%
AAAGTCATCATATCTCCACC+GGG - chr2.3:11186772-11186791 None:intergenic 40.0%
CAAAGTCATCATATCTCCAC+CGG - chr2.3:11186773-11186792 None:intergenic 40.0%
CCTCTCTTCAGAATAACTTC+TGG - chr2.3:11187799-11187818 None:intergenic 40.0%
GATATTGCAGGCCTATTCTA+CGG + chr2.3:11187750-11187769 MS.gene028961:intron 40.0%
GATCTTGAATGCCGATCATT+CGG + chr2.3:11187049-11187068 MS.gene028961:intron 40.0%
GGGTACTTAACTTTACGACA+TGG + chr2.3:11187027-11187046 MS.gene028961:intron 40.0%
TGCTATCAACTTCTGCAAGA+AGG - chr2.3:11186681-11186700 None:intergenic 40.0%
! CCAGAAGTTATTCTGAAGAG+AGG + chr2.3:11187796-11187815 MS.gene028961:CDS 40.0%
! CTCATAATGGAGTATCTACC+CGG + chr2.3:11186751-11186770 MS.gene028961:CDS 40.0%
! GTTATTCTGAAGAGAGGGTA+TGG + chr2.3:11187802-11187821 MS.gene028961:CDS 40.0%
GAAAAATCGCAGCAGAATGC+TGG + chr2.3:11187328-11187347 MS.gene028961:CDS 45.0%
GCTTTGTAGAGGACAGGTAT+TGG + chr2.3:11186559-11186578 MS.gene028961:intron 45.0%
GTCTCCCCGATATAGAACTT+AGG - chr2.3:11186829-11186848 None:intergenic 45.0%
TCTATCCAGAAGCAAGTTGC+CGG - chr2.3:11187141-11187160 None:intergenic 45.0%
TGAAGGTTACAGCAGTCTAG+CGG - chr2.3:11187203-11187222 None:intergenic 45.0%
! ATAATGGAGTATCTACCCGG+TGG + chr2.3:11186754-11186773 MS.gene028961:CDS 45.0%
! TGCTGCTGTTGTGATTGGTT+AGG - chr2.3:11187293-11187312 None:intergenic 45.0%
CCAATCACAACAGCAGCAAC+TGG + chr2.3:11187295-11187314 MS.gene028961:CDS 50.0%
CCAGTTGCTGCTGTTGTGAT+TGG - chr2.3:11187298-11187317 None:intergenic 50.0%
CTATCCAGAAGCAAGTTGCC+GGG - chr2.3:11187140-11187159 None:intergenic 50.0%
CTTGAATGCCGATCATTCGG+AGG + chr2.3:11187052-11187071 MS.gene028961:intron 50.0%
GCTAGACTGCTGTAACCTTC+AGG + chr2.3:11187202-11187221 MS.gene028961:CDS 50.0%
GGGTGTTCCAACCGTAGAAT+AGG - chr2.3:11187764-11187783 None:intergenic 50.0%
GGTATGGCGTGGAATGTGAT+TGG + chr2.3:11187818-11187837 MS.gene028961:CDS 50.0%
TTGCAGGCCTATTCTACGGT+TGG + chr2.3:11187754-11187773 MS.gene028961:intron 50.0%
! AGCAGCAACTGGAGCATTTG+CGG + chr2.3:11187306-11187325 MS.gene028961:CDS 50.0%
! TCTGAAGAGAGGGTATGGCG+TGG + chr2.3:11187807-11187826 MS.gene028961:CDS 55.0%
! CAAGCCCGGCAACTTGCTTC+TGG + chr2.3:11187133-11187152 MS.gene028961:CDS 60.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 11186557 11187861 11186557 ID=MS.gene028961
chr2.3 mRNA 11186557 11187861 11186557 ID=MS.gene028961.t1;Parent=MS.gene028961
chr2.3 exon 11186557 11186574 11186557 ID=MS.gene028961.t1.exon1;Parent=MS.gene028961.t1
chr2.3 CDS 11186557 11186574 11186557 ID=cds.MS.gene028961.t1;Parent=MS.gene028961.t1
chr2.3 exon 11186652 11186893 11186652 ID=MS.gene028961.t1.exon2;Parent=MS.gene028961.t1
chr2.3 CDS 11186652 11186893 11186652 ID=cds.MS.gene028961.t1;Parent=MS.gene028961.t1
chr2.3 exon 11187127 11187349 11187127 ID=MS.gene028961.t1.exon3;Parent=MS.gene028961.t1
chr2.3 CDS 11187127 11187349 11187127 ID=cds.MS.gene028961.t1;Parent=MS.gene028961.t1
chr2.3 exon 11187760 11187861 11187760 ID=MS.gene028961.t1.exon4;Parent=MS.gene028961.t1
chr2.3 CDS 11187760 11187861 11187760 ID=cds.MS.gene028961.t1;Parent=MS.gene028961.t1
Gene Sequence

>MS.gene028961

ATGCTTTGTAGAGGACAGGTATTGGAATTATCAGTGTTAGATTGAGCAAATATTATTTTCTTTTACTTATCAGGTGCTTTTATGTTTTTGATTAGGTTGAATATGTCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACTTTGCTGATGCGGAAAGAAGTACTGACTGAAGATGAACCTAAGTTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGGTGCGCTTAATCTGTAATCACTATTGTTTTGCGAAATTCTATTTAGTATAAGATTGTAGCTTAACTGAGTTTTGACAAACCGTTATTTTCAACGAAATCACTATTGTTTTGGAATTTTCAGTGTTAGATTGTAGGGTACTTAACTTTACGACATGGATCTTGAATGCCGATCATTCGGAGGTATTCATTTTAATCAAGAAATATTTAATATTCTGATTAATTGCATTTTACAGAGATATCAAGCCCGGCAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAACCGCTAGACTGCTGTAACCTTCAGGAAAAAGACTTATCTAATGGAGTTAACATAAGTGGAGTCCTTCAAAGTGATGAACTTGCTTTATCTCCTAACCAATCACAACAGCAGCAACTGGAGCATTTGCGGAAAAATCGCAGCAGAATGCTGGTAAGTCTCTCAAATAAACACATTCATAAATAAGCATGGCTTTTTTTTTTTTTTTTTTTTTTAACATAGCAAACTTTATTATAAAACGGCGAGACTCGCAACACATGAGTACTCACAAAACGTATTCATAAATAAGTATGATTACTTTATTCAAAGCGGCCTACACCTTTTTTCAGTTAAAATAAAAATTCAGTCATTATTCTTTCGTTATGTTTGGACTTCGGTTCTTTCGTTATATTTTTGTTTGGTTAGTAACTTAGAGTCTAGCATCATTTACATCGTATATCAATTTGGGTTATTGCTTTATATTTTATCATTTAAAGACTATTCTCTCTTTTGATTGTATGGCTGCTCTACTTAGATTCATCATTAATGACATTTTAAGCTTTTCTATCTTTGTGATATTGCAGGCCTATTCTACGGTTGGAACACCCGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGGTATGGCGTGGAATGTGATTGGTATAATAGTGTATGGCGTTGA
Protein sequence

>MS.gene028961.t1

MLCRGQVEYVKSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKEVLTEDEPKFYIGETVLAIESIHKHNYIHRDIKPGNLLLDRNGHVKLSDFGLCKPLDCCNLQEKDLSNGVNISGVLQSDELALSPNQSQQQQLEHLRKNRSRMLAYSTVGTPDYIAPEVILKRGYGVECDWYNSVWR