Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029061.t1 | XP_003592799.2 | 93.8 | 402 | 24 | 1 | 1 | 401 | 1 | 402 | 6.00E-202 | 713.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029061.t1 | Q9MAT6 | 59.7 | 380 | 115 | 10 | 1 | 362 | 1 | 360 | 1.6e-102 | 374.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029061.t1 | G7IF34 | 93.8 | 402 | 24 | 1 | 1 | 401 | 1 | 402 | 4.3e-202 | 713.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene029061.t1 | TR | ARID |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029061.t1 | MTR_1g116180 | 97.015 | 402 | 11 | 1 | 1 | 401 | 1 | 402 | 0.0 | 808 |
| MS.gene029061.t1 | MTR_1g116180 | 98.071 | 311 | 5 | 1 | 1 | 310 | 1 | 311 | 0.0 | 633 |
| MS.gene029061.t1 | MTR_7g005970 | 61.598 | 388 | 131 | 6 | 1 | 381 | 1 | 377 | 1.41e-157 | 451 |
| MS.gene029061.t1 | MTR_3g114920 | 45.283 | 318 | 155 | 5 | 24 | 338 | 20 | 321 | 8.15e-84 | 259 |
| MS.gene029061.t1 | MTR_3g009890 | 44.690 | 226 | 104 | 5 | 24 | 247 | 29 | 235 | 4.88e-52 | 175 |
| MS.gene029061.t1 | MTR_5g080030 | 22.662 | 278 | 181 | 8 | 66 | 320 | 70 | 336 | 4.17e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029061.t1 | AT1G04880 | 60.000 | 380 | 114 | 11 | 1 | 362 | 1 | 360 | 1.28e-134 | 393 |
| MS.gene029061.t1 | AT1G76110 | 44.643 | 336 | 162 | 8 | 2 | 334 | 12 | 326 | 8.98e-85 | 262 |
| MS.gene029061.t1 | AT3G13350 | 45.545 | 303 | 133 | 4 | 29 | 330 | 34 | 305 | 1.70e-82 | 255 |
| MS.gene029061.t1 | AT1G55650 | 36.562 | 320 | 154 | 7 | 12 | 330 | 11 | 282 | 1.70e-60 | 199 |
Find 95 sgRNAs with CRISPR-Local
Find 270 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATCCACTTCTGTTTGGTTT+TGG | 0.220656 | 1.1:+81765654 | None:intergenic |
| ATTGCAGGATTCCTGTTATT+GGG | 0.246287 | 1.1:-81768491 | MS.gene029061:intron |
| TATTGCAGGATTCCTGTTAT+TGG | 0.282044 | 1.1:-81768492 | MS.gene029061:intron |
| TGTGGATTCATTGCCTGTTA+TGG | 0.326537 | 1.1:-81764957 | MS.gene029061:CDS |
| GAAGCATTTGTAGCCGTTGA+TGG | 0.327945 | 1.1:+81767988 | None:intergenic |
| AATAATAGATTTGTTCATAA+TGG | 0.330253 | 1.1:+81767929 | None:intergenic |
| GTACCTCTCTTTGTCCTTCA+CGG | 0.336959 | 1.1:+81765180 | None:intergenic |
| GTATGTGAAAACTGCATCTT+TGG | 0.346993 | 1.1:+81767752 | None:intergenic |
| GTGGATTCATTGCCTGTTAT+GGG | 0.359014 | 1.1:-81764956 | MS.gene029061:CDS |
| CGGCAGGATCTCAGGTTGTC+GGG | 0.362545 | 1.1:-81765890 | MS.gene029061:CDS |
| AGATCATTAAAGATAGAAAA+TGG | 0.378478 | 1.1:-81768038 | MS.gene029061:CDS |
| GCTCAAAGCTGTCTCTTTCA+TGG | 0.381404 | 1.1:+81768803 | None:intergenic |
| GCATTCAACATGTCAGTATC+TGG | 0.384305 | 1.1:+81765070 | None:intergenic |
| TGCATCTTTGGAGCAGGAGC+TGG | 0.387029 | 1.1:+81767764 | None:intergenic |
| CAGGTTGTCGGGGTCATTGA+TGG | 0.395002 | 1.1:-81765879 | MS.gene029061:CDS |
| TCAGCACCAACTCCCATAAC+AGG | 0.424034 | 1.1:+81764944 | None:intergenic |
| TATTTAGTTACTGTCACAAT+TGG | 0.424860 | 1.1:-81765840 | MS.gene029061:CDS |
| AAATTGTATCCACTTCTGTT+TGG | 0.426908 | 1.1:+81765648 | None:intergenic |
| CTCAGCAATGGGATCATCTT+CGG | 0.429472 | 1.1:-81765910 | MS.gene029061:intron |
| TCATTGCCTGTTATGGGAGT+TGG | 0.435413 | 1.1:-81764950 | MS.gene029061:CDS |
| ATCATCTTCGGCAGGATCTC+AGG | 0.435568 | 1.1:-81765898 | MS.gene029061:CDS |
| ATTGATGGGAAATTTGATAG+TGG | 0.443834 | 1.1:-81765864 | MS.gene029061:CDS |
| AGTTACTGTCACAATTGGTT+CGG | 0.448759 | 1.1:-81765835 | MS.gene029061:CDS |
| AGAGAGGTACATAACAGAAA+TGG | 0.452384 | 1.1:-81765167 | MS.gene029061:CDS |
| TCGGCAGGATCTCAGGTTGT+CGG | 0.453538 | 1.1:-81765891 | MS.gene029061:CDS |
| TGTTGTTAGCAGGAACACTA+TGG | 0.456419 | 1.1:+81765754 | None:intergenic |
| GCTGTCTCTTTCATGGGTAA+TGG | 0.461532 | 1.1:+81768810 | None:intergenic |
| CAAGCTCTTCATACTTAGCT+TGG | 0.463066 | 1.1:-81768727 | MS.gene029061:CDS |
| GAACATACCGGAAGTTGTAT+TGG | 0.464656 | 1.1:+81767888 | None:intergenic |
| TGGTGGGATGCTGGCAGCAC+AGG | 0.472613 | 1.1:+81765774 | None:intergenic |
| AACTGGACCAATACAACTTC+CGG | 0.475197 | 1.1:-81767895 | MS.gene029061:intron |
| GGAAGGACCGAGAGATTAGT+AGG | 0.477594 | 1.1:-81765581 | MS.gene029061:CDS |
| TTCACCTATGGCAACATATG+AGG | 0.483062 | 1.1:-81768766 | MS.gene029061:CDS |
| AACATGTCAGTATCTGGTTC+AGG | 0.486501 | 1.1:+81765076 | None:intergenic |
| GCGGTCACGTTGTTGTTAGC+AGG | 0.489436 | 1.1:+81765744 | None:intergenic |
| CAAGCTAAGTATGAAGAGCT+TGG | 0.497014 | 1.1:+81768728 | None:intergenic |
| CTTTGGAGCAGGAGCTGGGA+TGG | 0.499860 | 1.1:+81767769 | None:intergenic |
| GGAACACTATGGTGGGATGC+TGG | 0.501068 | 1.1:+81765765 | None:intergenic |
| TTTAACTGTTGAAAGACAGC+TGG | 0.504737 | 1.1:+81767713 | None:intergenic |
| CCAGGGAGCCTACATGAACT+TGG | 0.508162 | 1.1:+81768680 | None:intergenic |
| TGATGACTATGAAGATGATA+AGG | 0.508495 | 1.1:-81764999 | MS.gene029061:CDS |
| GTGTCCATCGTCGCCGACGC+AGG | 0.509894 | 1.1:-81765713 | MS.gene029061:CDS |
| TTTGTTGAAGTGACTTCTCG+TGG | 0.510774 | 1.1:-81768441 | MS.gene029061:CDS |
| GGAGAAGCTCCACACTCTCA+TGG | 0.512213 | 1.1:-81768706 | MS.gene029061:CDS |
| AAGCTAAGTATGAAGAGCTT+GGG | 0.516105 | 1.1:+81768729 | None:intergenic |
| CGGTCCTTCCCTCGGTGAAG+AGG | 0.519858 | 1.1:+81765594 | None:intergenic |
| GCATCTTTGGAGCAGGAGCT+GGG | 0.522935 | 1.1:+81767765 | None:intergenic |
| CGAGAGATTAGTAGGACCAT+TGG | 0.525975 | 1.1:-81765573 | MS.gene029061:CDS |
| TGGTGAATATCCTTCACCTA+TGG | 0.528306 | 1.1:-81768778 | MS.gene029061:CDS |
| TTGCAGGATTCCTGTTATTG+GGG | 0.528895 | 1.1:-81768490 | MS.gene029061:intron |
| TAATCTCTCGGTCCTTCCCT+CGG | 0.534837 | 1.1:+81765586 | None:intergenic |
| GAAAACTGCATCTTTGGAGC+AGG | 0.538241 | 1.1:+81767758 | None:intergenic |
| CTCAAAGCTGTCTCTTTCAT+GGG | 0.539064 | 1.1:+81768804 | None:intergenic |
| TCTTCCTGCGTCGGCGACGA+TGG | 0.540297 | 1.1:+81765709 | None:intergenic |
| TTGAAGTGACTTCTCGTGGA+GGG | 0.541093 | 1.1:-81768437 | MS.gene029061:CDS |
| CCGTCTGAACTACTCTGCTC+CGG | 0.545473 | 1.1:+81765025 | None:intergenic |
| GATCATTCTTCAACTTCTCA+CGG | 0.547465 | 1.1:+81765137 | None:intergenic |
| CAATGGTCCTACTAATCTCT+CGG | 0.547885 | 1.1:+81765574 | None:intergenic |
| GTTAATTCTGCTCCGCCTGA+AGG | 0.550930 | 1.1:-81767689 | MS.gene029061:intron |
| GTAGGACCATTGGTGAACTC+TGG | 0.551646 | 1.1:-81765563 | MS.gene029061:CDS |
| CACCCAAAACCAAACAGAAG+TGG | 0.557660 | 1.1:-81765657 | MS.gene029061:CDS |
| AGGTTGTCGGGGTCATTGAT+GGG | 0.564891 | 1.1:-81765878 | MS.gene029061:CDS |
| TCATATGTTGCCATAGGTGA+AGG | 0.568033 | 1.1:+81768768 | None:intergenic |
| TCTCTGATTTCTTCCTGCGT+CGG | 0.568830 | 1.1:+81765700 | None:intergenic |
| GGCAGACTCTCTTCAAACTC+CGG | 0.569431 | 1.1:-81765044 | MS.gene029061:CDS |
| GAGAAGCTCCACACTCTCAT+GGG | 0.571795 | 1.1:-81768705 | MS.gene029061:CDS |
| TCTTTGCAGAACAGCATCCA+AGG | 0.571889 | 1.1:-81765623 | MS.gene029061:CDS |
| GCAATGGGATCATCTTCGGC+AGG | 0.580770 | 1.1:-81765906 | MS.gene029061:CDS |
| TCAGGAAATCGCTGTTGAAG+TGG | 0.581487 | 1.1:+81765094 | None:intergenic |
| AAAGAGACAGCTTTGAGCCA+TGG | 0.588397 | 1.1:-81768798 | MS.gene029061:CDS |
| GGCTAAAACCTCTTCACCGA+GGG | 0.597780 | 1.1:-81765602 | MS.gene029061:CDS |
| TGTTAGCAGGAACACTATGG+TGG | 0.605828 | 1.1:+81765757 | None:intergenic |
| AAGACAGCTGGTTGAACTTG+TGG | 0.608568 | 1.1:+81767725 | None:intergenic |
| CCGGAGCAGAGTAGTTCAGA+CGG | 0.612929 | 1.1:-81765025 | MS.gene029061:CDS |
| CTATGAAGATGATAAGGCGA+AGG | 0.615408 | 1.1:-81764993 | MS.gene029061:CDS |
| TTATCAAGATAAAGCCGTGA+AGG | 0.616173 | 1.1:-81765194 | MS.gene029061:CDS |
| CTTGTTCCAGAGTTCACCAA+TGG | 0.619707 | 1.1:+81765557 | None:intergenic |
| ACCTCCTCATATGTTGCCAT+AGG | 0.625420 | 1.1:+81768762 | None:intergenic |
| AAAACCTCTTCACCGAGGGA+AGG | 0.626858 | 1.1:-81765598 | MS.gene029061:CDS |
| ACCTATGGCAACATATGAGG+AGG | 0.630539 | 1.1:-81768763 | MS.gene029061:CDS |
| AACAACGTGACCGCCTCTGT+CGG | 0.631474 | 1.1:-81765735 | MS.gene029061:CDS |
| GTTGAAGTGACTTCTCGTGG+AGG | 0.634997 | 1.1:-81768438 | MS.gene029061:CDS |
| GGCAGGATCTCAGGTTGTCG+GGG | 0.638448 | 1.1:-81765889 | MS.gene029061:CDS |
| TGCAGGATTCCTGTTATTGG+GGG | 0.639336 | 1.1:-81768489 | MS.gene029061:intron |
| AAGCCGTGAAGGACAAAGAG+AGG | 0.641251 | 1.1:-81765183 | MS.gene029061:CDS |
| ATTGGTTCGGAGAAACTCAA+AGG | 0.644223 | 1.1:-81765822 | MS.gene029061:CDS |
| GCGACGATGGACACCGACAG+AGG | 0.659779 | 1.1:+81765722 | None:intergenic |
| TACTGACATGTTGAATGCTG+AGG | 0.661079 | 1.1:-81765065 | MS.gene029061:CDS |
| GAGAAGTCACTTCAACAAAG+AGG | 0.662036 | 1.1:+81768445 | None:intergenic |
| ACTTGGTGCCCATGAGAGTG+TGG | 0.664789 | 1.1:+81768697 | None:intergenic |
| ACGATGGACACCGACAGAGG+CGG | 0.677611 | 1.1:+81765725 | None:intergenic |
| GCAAAGCAAAGACCTTCAGG+CGG | 0.704080 | 1.1:+81767677 | None:intergenic |
| TAGGTGAAGGATATTCACCA+TGG | 0.732815 | 1.1:+81768781 | None:intergenic |
| AGGCTAAAACCTCTTCACCG+AGG | 0.737163 | 1.1:-81765603 | MS.gene029061:CDS |
| GTTAGCAGGAACACTATGGT+GGG | 0.739497 | 1.1:+81765758 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAACATACAAAAGATT+AGG | + | chr1.1:81767758-81767777 | None:intergenic | 15.0% |
| !! | ATAAACAATACTAGTTATTA+TGG | + | chr1.1:81767836-81767855 | None:intergenic | 15.0% |
| !!! | AATAATAGATTTGTTCATAA+TGG | + | chr1.1:81765851-81765870 | None:intergenic | 15.0% |
| !!! | GATTATAATTTCAATTTTGT+TGG | - | chr1.1:81765381-81765400 | MS.gene029061:intron | 15.0% |
| !!! | TTAGTAGTTAATCTTATTTT+GGG | + | chr1.1:81766135-81766154 | None:intergenic | 15.0% |
| !!! | TTTACTTTTATTTTAAGATG+TGG | - | chr1.1:81765154-81765173 | MS.gene029061:CDS | 15.0% |
| !!! | TTTGTTTTTGAGAATATTTT+AGG | - | chr1.1:81766182-81766201 | MS.gene029061:intron | 15.0% |
| !! | AGATCATTAAAGATAGAAAA+TGG | - | chr1.1:81765739-81765758 | MS.gene029061:CDS | 20.0% |
| !! | ATAAATTGGAAATTTCACTA+TGG | - | chr1.1:81765961-81765980 | MS.gene029061:intron | 20.0% |
| !! | ATTATGAGCTTACATTTAAT+GGG | - | chr1.1:81766981-81767000 | MS.gene029061:intron | 20.0% |
| !! | CAATCCTATATTAAGTTTAA+AGG | + | chr1.1:81767616-81767635 | None:intergenic | 20.0% |
| !! | TATGTTTAAATTGATGGAAA+GGG | - | chr1.1:81766206-81766225 | MS.gene029061:intron | 20.0% |
| !! | TATTATGAGCTTACATTTAA+TGG | - | chr1.1:81766980-81766999 | MS.gene029061:intron | 20.0% |
| !! | TCAATTCTCAAATAATGAAA+TGG | - | chr1.1:81766589-81766608 | MS.gene029061:intron | 20.0% |
| !! | TCATTATTTGAGAATTGAAA+TGG | + | chr1.1:81766587-81766606 | None:intergenic | 20.0% |
| !! | TTAGGTTATGTTTAAATTGA+TGG | - | chr1.1:81766200-81766219 | MS.gene029061:intron | 20.0% |
| !! | TTATGTTTAAATTGATGGAA+AGG | - | chr1.1:81766205-81766224 | MS.gene029061:intron | 20.0% |
| !! | TTCCAATTTATACATTAGAA+GGG | + | chr1.1:81765952-81765971 | None:intergenic | 20.0% |
| !! | TTGCAATTACAAAAAACATT+TGG | - | chr1.1:81765257-81765276 | MS.gene029061:intron | 20.0% |
| !! | TTTCCAATTTATACATTAGA+AGG | + | chr1.1:81765953-81765972 | None:intergenic | 20.0% |
| !!! | ATTCTTTTGAATCATAACTT+TGG | - | chr1.1:81765657-81765676 | MS.gene029061:CDS | 20.0% |
| !!! | GTTAGTAGTTAATCTTATTT+TGG | + | chr1.1:81766136-81766155 | None:intergenic | 20.0% |
| !!! | TAGTTTTCAATCTAGATATA+TGG | - | chr1.1:81766713-81766732 | MS.gene029061:intron | 20.0% |
| ! | AAACAATCAAACAATGGAAT+AGG | - | chr1.1:81766630-81766649 | MS.gene029061:intron | 25.0% |
| ! | AAATAGAAAGAATGGTTAAC+AGG | + | chr1.1:81767724-81767743 | None:intergenic | 25.0% |
| ! | AACAATCAAACAATGGAATA+GGG | - | chr1.1:81766631-81766650 | MS.gene029061:intron | 25.0% |
| ! | AATAGAAAGAATGGTTAACA+GGG | + | chr1.1:81767723-81767742 | None:intergenic | 25.0% |
| ! | AATTCGTAGTTTATAAATCC+AGG | + | chr1.1:81765118-81765137 | None:intergenic | 25.0% |
| ! | ACATTTATCACTAAATCTCT+CGG | + | chr1.1:81767589-81767608 | None:intergenic | 25.0% |
| ! | ATAACAGTAAGAGAAGTTAT+AGG | + | chr1.1:81767808-81767827 | None:intergenic | 25.0% |
| ! | ATGTTTAAATTGATGGAAAG+GGG | - | chr1.1:81766207-81766226 | MS.gene029061:intron | 25.0% |
| ! | ATTCGTAGTTTATAAATCCA+GGG | + | chr1.1:81765117-81765136 | None:intergenic | 25.0% |
| ! | ATTGTTTGATTGTTTCATTG+AGG | + | chr1.1:81766625-81766644 | None:intergenic | 25.0% |
| ! | CTATTTAACGATTAGAGAAA+TGG | + | chr1.1:81766696-81766715 | None:intergenic | 25.0% |
| ! | TAAGTAATCTCTAATCTATC+TGG | - | chr1.1:81768383-81768402 | MS.gene029061:intron | 25.0% |
| ! | TAATATAGTATCTTTCTCCT+AGG | - | chr1.1:81766753-81766772 | MS.gene029061:intron | 25.0% |
| ! | TATTTAGTTACTGTCACAAT+TGG | - | chr1.1:81767937-81767956 | MS.gene029061:CDS | 25.0% |
| ! | TATTTGAGAATTGAAATGGT+AGG | + | chr1.1:81766583-81766602 | None:intergenic | 25.0% |
| ! | TCAAATTTCACTACTCTATA+GGG | + | chr1.1:81766437-81766456 | None:intergenic | 25.0% |
| ! | TCAATGAAACAATCAAACAA+TGG | - | chr1.1:81766624-81766643 | MS.gene029061:intron | 25.0% |
| ! | TCCAATTTATACATTAGAAG+GGG | + | chr1.1:81765951-81765970 | None:intergenic | 25.0% |
| ! | TCCACCTTTAAACTTAATAT+AGG | - | chr1.1:81767609-81767628 | MS.gene029061:intron | 25.0% |
| ! | TCCTATATTAAGTTTAAAGG+TGG | + | chr1.1:81767613-81767632 | None:intergenic | 25.0% |
| ! | TCTTGATAAACCTTAAATGT+TGG | + | chr1.1:81768572-81768591 | None:intergenic | 25.0% |
| ! | TGCAAAGTTATACAAGTAAA+TGG | + | chr1.1:81765242-81765261 | None:intergenic | 25.0% |
| ! | TTCAAATTTCACTACTCTAT+AGG | + | chr1.1:81766438-81766457 | None:intergenic | 25.0% |
| !! | AAAGTACTAGAGTGAAAATT+GGG | - | chr1.1:81767435-81767454 | MS.gene029061:intron | 25.0% |
| !! | ACTGATAATGTCCAAAATAT+AGG | - | chr1.1:81765451-81765470 | MS.gene029061:intron | 25.0% |
| !! | AGGTAAGTCAATTTTATCAA+TGG | + | chr1.1:81766563-81766582 | None:intergenic | 25.0% |
| !! | AGTTTTCAATTTTCCATCAA+CGG | - | chr1.1:81765776-81765795 | MS.gene029061:CDS | 25.0% |
| !! | ATGATTTTCCATGACTTAAT+CGG | - | chr1.1:81766777-81766796 | MS.gene029061:intron | 25.0% |
| !! | GTTAACCATTCTTTCTATTT+TGG | - | chr1.1:81767724-81767743 | MS.gene029061:CDS | 25.0% |
| !! | TAAGTCAATTTTATCAATGG+AGG | + | chr1.1:81766560-81766579 | None:intergenic | 25.0% |
| !! | TGATGGTCTTTTAAATCTAT+TGG | - | chr1.1:81766814-81766833 | MS.gene029061:intron | 25.0% |
| !! | TGCTATTTAGTACAAAATAG+CGG | - | chr1.1:81766481-81766500 | MS.gene029061:intron | 25.0% |
| !! | TGTAAGATTTGTGCTATTAT+AGG | + | chr1.1:81767344-81767363 | None:intergenic | 25.0% |
| !! | TTAACACATCTTTTATGAGT+TGG | - | chr1.1:81768277-81768296 | MS.gene029061:intron | 25.0% |
| !! | TTCAATTTCCTTTTTCTTAG+TGG | + | chr1.1:81766158-81766177 | None:intergenic | 25.0% |
| !!! | AAAAGTACTAGAGTGAAAAT+TGG | - | chr1.1:81767434-81767453 | MS.gene029061:intron | 25.0% |
| !!! | AACATTTGGAATTTTATTGC+AGG | - | chr1.1:81765271-81765290 | MS.gene029061:intron | 25.0% |
| !!! | AAGGAAGTTTTGTTTTCATT+TGG | + | chr1.1:81767232-81767251 | None:intergenic | 25.0% |
| !!! | ACATTTTAAGTTTAGTATCG+TGG | - | chr1.1:81767361-81767380 | MS.gene029061:intron | 25.0% |
| !!! | ATTCTTTCTATTTTGGAAGT+GGG | - | chr1.1:81767731-81767750 | MS.gene029061:CDS | 25.0% |
| !!! | CTCTAATTTTTAAAGCTTCT+GGG | + | chr1.1:81768425-81768444 | None:intergenic | 25.0% |
| !!! | GTCCTTTTGATGATAAAATA+AGG | + | chr1.1:81766935-81766954 | None:intergenic | 25.0% |
| !!! | TAGGTAAATGTTAGTTTTCA+AGG | - | chr1.1:81767093-81767112 | MS.gene029061:intron | 25.0% |
| !!! | TCTAATTTTTAAAGCTTCTG+GGG | + | chr1.1:81768424-81768443 | None:intergenic | 25.0% |
| !!! | TCTCTAATTTTTAAAGCTTC+TGG | + | chr1.1:81768426-81768445 | None:intergenic | 25.0% |
| !!! | TGCCTTATTTTATCATCAAA+AGG | - | chr1.1:81766930-81766949 | MS.gene029061:intron | 25.0% |
| AAAGGATATTCCAATAGTCA+GGG | - | chr1.1:81767539-81767558 | MS.gene029061:intron | 30.0% | |
| AAATTAGAGAATGATAGCTC+AGG | - | chr1.1:81768436-81768455 | MS.gene029061:CDS | 30.0% | |
| AAATTGTATCCACTTCTGTT+TGG | + | chr1.1:81768132-81768151 | None:intergenic | 30.0% | |
| AAGCTCAGATATGCATTATT+TGG | - | chr1.1:81768505-81768524 | MS.gene029061:intron | 30.0% | |
| AAGTACTAGAGTGAAAATTG+GGG | - | chr1.1:81767436-81767455 | MS.gene029061:intron | 30.0% | |
| AATTAGAGAATGATAGCTCA+GGG | - | chr1.1:81768437-81768456 | MS.gene029061:CDS | 30.0% | |
| ACGAATTAGATATTGTGACT+TGG | - | chr1.1:81765131-81765150 | MS.gene029061:CDS | 30.0% | |
| ACTACTAACCACTAAGAAAA+AGG | - | chr1.1:81766147-81766166 | MS.gene029061:intron | 30.0% | |
| ATTGATGGGAAATTTGATAG+TGG | - | chr1.1:81767913-81767932 | MS.gene029061:CDS | 30.0% | |
| CAATAGTTCTTAGACCAAAT+AGG | + | chr1.1:81768355-81768374 | None:intergenic | 30.0% | |
| CACTTCCAAAATAGAAAGAA+TGG | + | chr1.1:81767732-81767751 | None:intergenic | 30.0% | |
| CATTAAGATGAATGAGTTGT+CGG | - | chr1.1:81767392-81767411 | MS.gene029061:intron | 30.0% | |
| CTACATATTCACACAATGTT+TGG | + | chr1.1:81765429-81765448 | None:intergenic | 30.0% | |
| GGTTAAAAACTATAGAGATG+TGG | + | chr1.1:81766304-81766323 | None:intergenic | 30.0% | |
| GTATAGGGTTTGATATATGT+TGG | - | chr1.1:81767681-81767700 | MS.gene029061:intron | 30.0% | |
| TAAAGGATATTCCAATAGTC+AGG | - | chr1.1:81767538-81767557 | MS.gene029061:intron | 30.0% | |
| TAATTAACAACAGTAGGGTA+GGG | + | chr1.1:81766393-81766412 | None:intergenic | 30.0% | |
| TGATGACTATGAAGATGATA+AGG | - | chr1.1:81768778-81768797 | MS.gene029061:CDS | 30.0% | |
| TGTATATTCCGATTAAGTCA+TGG | + | chr1.1:81766788-81766807 | None:intergenic | 30.0% | |
| TTAGAGAAATGGAATCAGAA+AGG | + | chr1.1:81766685-81766704 | None:intergenic | 30.0% | |
| TTGTTAATTAGTGGCTACAT+CGG | - | chr1.1:81766403-81766422 | MS.gene029061:intron | 30.0% | |
| ! | ATTTTGTTGGTATGAATGCA+TGG | - | chr1.1:81765394-81765413 | MS.gene029061:intron | 30.0% |
| ! | CGGAATATACATGATTTTGA+TGG | - | chr1.1:81766797-81766816 | MS.gene029061:intron | 30.0% |
| ! | CTCTATAGTTTTTAACCTGT+CGG | - | chr1.1:81766307-81766326 | MS.gene029061:intron | 30.0% |
| ! | TCTATAGTTTTTAACCTGTC+GGG | - | chr1.1:81766308-81766327 | MS.gene029061:intron | 30.0% |
| ! | TTAAGTTGCACCAACATTTA+AGG | - | chr1.1:81768559-81768578 | MS.gene029061:intron | 30.0% |
| ! | TTGTTTGGATTGTCTGAAAT+AGG | - | chr1.1:81766241-81766260 | MS.gene029061:intron | 30.0% |
| !! | CATTCTTTCTATTTTGGAAG+TGG | - | chr1.1:81767730-81767749 | MS.gene029061:CDS | 30.0% |
| !!! | ATTATTTTAAAGCTCGCAAC+TGG | - | chr1.1:81765865-81765884 | MS.gene029061:CDS | 30.0% |
| !!! | CTAATTTTTAAAGCTTCTGG+GGG | + | chr1.1:81768423-81768442 | None:intergenic | 30.0% |
| !!! | TTTGGTTTTTCCTACATGTT+TGG | - | chr1.1:81765675-81765694 | MS.gene029061:CDS | 30.0% |
| AAACTATAGAGATGTGGTGA+TGG | + | chr1.1:81766298-81766317 | None:intergenic | 35.0% | |
| AACGAGAGTTGACTAGATAA+AGG | - | chr1.1:81767521-81767540 | MS.gene029061:intron | 35.0% | |
| AAGCTAAGTATGAAGAGCTT+GGG | + | chr1.1:81765051-81765070 | None:intergenic | 35.0% | |
| AATTAACAACAGTAGGGTAG+GGG | + | chr1.1:81766392-81766411 | None:intergenic | 35.0% | |
| ACCCTACTGTTGTTAATTAG+TGG | - | chr1.1:81766394-81766413 | MS.gene029061:intron | 35.0% | |
| AGCAAGAAACTCACAGATTA+TGG | - | chr1.1:81767296-81767315 | MS.gene029061:intron | 35.0% | |
| AGCCACTAATTAACAACAGT+AGG | + | chr1.1:81766399-81766418 | None:intergenic | 35.0% | |
| AGTCATGGAAAATCATTCCT+AGG | + | chr1.1:81766773-81766792 | None:intergenic | 35.0% | |
| AGTGATACAGTTACCTTATC+TGG | - | chr1.1:81765702-81765721 | MS.gene029061:CDS | 35.0% | |
| AGTTACTGTCACAATTGGTT+CGG | - | chr1.1:81767942-81767961 | MS.gene029061:CDS | 35.0% | |
| ATATCAAACCCTATACCACT+AGG | + | chr1.1:81767677-81767696 | None:intergenic | 35.0% | |
| ATCACTACAACCAAACATGT+AGG | + | chr1.1:81765688-81765707 | None:intergenic | 35.0% | |
| ATGAGCTTACATTTAATGGG+TGG | - | chr1.1:81766984-81767003 | MS.gene029061:intron | 35.0% | |
| ATTGCAGGATTCCTGTTATT+GGG | - | chr1.1:81765286-81765305 | MS.gene029061:intron | 35.0% | |
| CAAGACAGATTAACCAGATA+AGG | + | chr1.1:81765718-81765737 | None:intergenic | 35.0% | |
| CTAATTAACAACAGTAGGGT+AGG | + | chr1.1:81766394-81766413 | None:intergenic | 35.0% | |
| CTGAATCAGAAAAAGCAGTA+AGG | - | chr1.1:81768247-81768266 | MS.gene029061:intron | 35.0% | |
| GATCATTCTTCAACTTCTCA+CGG | + | chr1.1:81768643-81768662 | None:intergenic | 35.0% | |
| GATTGTTTCATTGAGGAACT+AGG | + | chr1.1:81766618-81766637 | None:intergenic | 35.0% | |
| GCCACTAATTAACAACAGTA+GGG | + | chr1.1:81766398-81766417 | None:intergenic | 35.0% | |
| GCCCCTTCTAATGTATAAAT+TGG | - | chr1.1:81765947-81765966 | MS.gene029061:intron | 35.0% | |
| GTATGTGAAAACTGCATCTT+TGG | + | chr1.1:81766028-81766047 | None:intergenic | 35.0% | |
| TAAATCTCTCGGTACTAGTT+TGG | + | chr1.1:81767578-81767597 | None:intergenic | 35.0% | |
| TAGCTCAGGGATTAAATTAC+AGG | - | chr1.1:81768450-81768469 | MS.gene029061:CDS | 35.0% | |
| TATTGAAAAACCATCTCCCT+CGG | + | chr1.1:81767075-81767094 | None:intergenic | 35.0% | |
| TATTGCAGGATTCCTGTTAT+TGG | - | chr1.1:81765285-81765304 | MS.gene029061:intron | 35.0% | |
| TCGTTACTAGTACTTACACA+TGG | + | chr1.1:81767506-81767525 | None:intergenic | 35.0% | |
| TGGAGGATCAAGAAAAATAG+CGG | + | chr1.1:81766543-81766562 | None:intergenic | 35.0% | |
| TGTAGTTCCAATGAACATAC+CGG | + | chr1.1:81765904-81765923 | None:intergenic | 35.0% | |
| TTATCAAGATAAAGCCGTGA+AGG | - | chr1.1:81768583-81768602 | MS.gene029061:intron | 35.0% | |
| TTGTAAGACGTCACAATGTT+TGG | - | chr1.1:81767129-81767148 | MS.gene029061:intron | 35.0% | |
| TTGTCGGACAATATAGTACT+AGG | - | chr1.1:81767408-81767427 | MS.gene029061:intron | 35.0% | |
| TTTAACTGTTGAAAGACAGC+TGG | + | chr1.1:81766067-81766086 | None:intergenic | 35.0% | |
| ! | ACATAATTTGTCATCGTGCA+CGG | + | chr1.1:81766907-81766926 | None:intergenic | 35.0% |
| ! | AGAGAGGTACATAACAGAAA+TGG | - | chr1.1:81768610-81768629 | MS.gene029061:intron | 35.0% |
| ! | ATTGTCTGAAATAGGATGTG+AGG | - | chr1.1:81766249-81766268 | MS.gene029061:intron | 35.0% |
| ! | TGAGCTTACATTTAATGGGT+GGG | - | chr1.1:81766985-81767004 | MS.gene029061:intron | 35.0% |
| ! | TGCTGTTTGTACTAATGTCA+GGG | - | chr1.1:81765925-81765944 | MS.gene029061:intron | 35.0% |
| ! | TTGTGCTATTATAGGATCAC+AGG | + | chr1.1:81767336-81767355 | None:intergenic | 35.0% |
| ! | TTTTAACCTGTCGGGATATT+GGG | - | chr1.1:81766316-81766335 | MS.gene029061:intron | 35.0% |
| ! | TTTTTAACCTGTCGGGATAT+TGG | - | chr1.1:81766315-81766334 | MS.gene029061:intron | 35.0% |
| !! | GAAGGAGAAAGATTTTAGTG+TGG | - | chr1.1:81768802-81768821 | MS.gene029061:CDS | 35.0% |
| !! | TATCCACTTCTGTTTGGTTT+TGG | + | chr1.1:81768126-81768145 | None:intergenic | 35.0% |
| !! | TTAGTTTTCAAGGTTTGCTC+AGG | - | chr1.1:81767103-81767122 | MS.gene029061:intron | 35.0% |
| !! | TTGCTGTTTGTACTAATGTC+AGG | - | chr1.1:81765924-81765943 | MS.gene029061:intron | 35.0% |
| !!! | ATCCACTTCTGTTTGGTTTT+GGG | + | chr1.1:81768125-81768144 | None:intergenic | 35.0% |
| !!! | CTTACTGCTTTTTCTGATTC+AGG | + | chr1.1:81768249-81768268 | None:intergenic | 35.0% |
| AAAGCAAAGCAAAGACCTTC+AGG | + | chr1.1:81766106-81766125 | None:intergenic | 40.0% | |
| AACTGGACCAATACAACTTC+CGG | - | chr1.1:81765882-81765901 | MS.gene029061:CDS | 40.0% | |
| AACTTCCTTCTAAGCAGCTT+AGG | - | chr1.1:81767243-81767262 | MS.gene029061:intron | 40.0% | |
| AATGCATATCTGAGCTTCTG+CGG | + | chr1.1:81768502-81768521 | None:intergenic | 40.0% | |
| ACAACTTCCGGTATGTTCAT+TGG | - | chr1.1:81765894-81765913 | MS.gene029061:CDS | 40.0% | |
| AGGTAAGAGCAGGATAGTTT+AGG | + | chr1.1:81768335-81768354 | None:intergenic | 40.0% | |
| ATTAACAACAGTAGGGTAGG+GGG | + | chr1.1:81766391-81766410 | None:intergenic | 40.0% | |
| ATTCACACAATGTTTGGCGT+CGG | + | chr1.1:81765423-81765442 | None:intergenic | 40.0% | |
| CAAGCTAAGTATGAAGAGCT+TGG | + | chr1.1:81765052-81765071 | None:intergenic | 40.0% | |
| CAAGCTCTTCATACTTAGCT+TGG | - | chr1.1:81765050-81765069 | MS.gene029061:CDS | 40.0% | |
| CAATCCATTGCAAAATCCGA+GGG | - | chr1.1:81767056-81767075 | MS.gene029061:intron | 40.0% | |
| CAATGGTCCTACTAATCTCT+CGG | + | chr1.1:81768206-81768225 | None:intergenic | 40.0% | |
| CTATCCTGCTCTTACCTATT+TGG | - | chr1.1:81768338-81768357 | MS.gene029061:intron | 40.0% | |
| CTATGAAGATGATAAGGCGA+AGG | - | chr1.1:81768784-81768803 | MS.gene029061:CDS | 40.0% | |
| CTCAAAGCTGTCTCTTTCAT+GGG | + | chr1.1:81764976-81764995 | None:intergenic | 40.0% | |
| GAACATACCGGAAGTTGTAT+TGG | + | chr1.1:81765892-81765911 | None:intergenic | 40.0% | |
| GAGAAGTCACTTCAACAAAG+AGG | + | chr1.1:81765335-81765354 | None:intergenic | 40.0% | |
| GCATTCAACATGTCAGTATC+TGG | + | chr1.1:81768710-81768729 | None:intergenic | 40.0% | |
| GGAGGATCAAGAAAAATAGC+GGG | + | chr1.1:81766542-81766561 | None:intergenic | 40.0% | |
| GTCCAAAATATAGGACACTG+AGG | - | chr1.1:81765460-81765479 | MS.gene029061:intron | 40.0% | |
| GTGGATTCATTGCCTGTTAT+GGG | - | chr1.1:81768821-81768840 | MS.gene029061:CDS | 40.0% | |
| TACTGACATGTTGAATGCTG+AGG | - | chr1.1:81768712-81768731 | MS.gene029061:CDS | 40.0% | |
| TAGACCAAATAGGTAAGAGC+AGG | + | chr1.1:81768345-81768364 | None:intergenic | 40.0% | |
| TAGGTGAAGGATATTCACCA+TGG | + | chr1.1:81764999-81765018 | None:intergenic | 40.0% | |
| TCATATGTTGCCATAGGTGA+AGG | + | chr1.1:81765012-81765031 | None:intergenic | 40.0% | |
| TGGTGAATATCCTTCACCTA+TGG | - | chr1.1:81764999-81765018 | MS.gene029061:CDS | 40.0% | |
| TGTGGATTCATTGCCTGTTA+TGG | - | chr1.1:81768820-81768839 | MS.gene029061:CDS | 40.0% | |
| TGTTGTTAGCAGGAACACTA+TGG | + | chr1.1:81768026-81768045 | None:intergenic | 40.0% | |
| TTACACCTAAGCTGCTTAGA+AGG | + | chr1.1:81767251-81767270 | None:intergenic | 40.0% | |
| TTCACCTATGGCAACATATG+AGG | - | chr1.1:81765011-81765030 | MS.gene029061:CDS | 40.0% | |
| TTGCAGGATTCCTGTTATTG+GGG | - | chr1.1:81765287-81765306 | MS.gene029061:intron | 40.0% | |
| TTTAACCTGTCGGGATATTG+GGG | - | chr1.1:81766317-81766336 | MS.gene029061:intron | 40.0% | |
| TTTGTTGAAGTGACTTCTCG+TGG | - | chr1.1:81765336-81765355 | MS.gene029061:intron | 40.0% | |
| ! | AACATGTCAGTATCTGGTTC+AGG | + | chr1.1:81768704-81768723 | None:intergenic | 40.0% |
| ! | ACTTTTGTCACCCTGACTAT+TGG | + | chr1.1:81767552-81767571 | None:intergenic | 40.0% |
| ! | CAAATGCTTCTTTTGTGCTG+CGG | - | chr1.1:81765802-81765821 | MS.gene029061:CDS | 40.0% |
| ! | GAGCTTACATTTAATGGGTG+GGG | - | chr1.1:81766986-81767005 | MS.gene029061:intron | 40.0% |
| !! | ATTGGTTCGGAGAAACTCAA+AGG | - | chr1.1:81767955-81767974 | MS.gene029061:CDS | 40.0% |
| !! | GAGGGAGATGGTTTTTCAAT+AGG | - | chr1.1:81767074-81767093 | MS.gene029061:intron | 40.0% |
| AAGACAGCTGGTTGAACTTG+TGG | + | chr1.1:81766055-81766074 | None:intergenic | 45.0% | |
| AATTCCCTTCCCCCAATAAC+AGG | + | chr1.1:81765300-81765319 | None:intergenic | 45.0% | |
| ACCTATGGCAACATATGAGG+AGG | - | chr1.1:81765014-81765033 | MS.gene029061:CDS | 45.0% | |
| ACCTCCTCATATGTTGCCAT+AGG | + | chr1.1:81765018-81765037 | None:intergenic | 45.0% | |
| ATTGCAAAATCCGAGGGAGA+TGG | - | chr1.1:81767062-81767081 | MS.gene029061:intron | 45.0% | |
| CAACACCACCTAGTGGTATA+GGG | - | chr1.1:81767666-81767685 | MS.gene029061:intron | 45.0% | |
| CACCCAAAACCAAACAGAAG+TGG | - | chr1.1:81768120-81768139 | MS.gene029061:intron | 45.0% | |
| CGAGAGATTAGTAGGACCAT+TGG | - | chr1.1:81768204-81768223 | MS.gene029061:intron | 45.0% | |
| CTCAGCAATGGGATCATCTT+CGG | - | chr1.1:81767867-81767886 | MS.gene029061:intron | 45.0% | |
| CTTGTTCCAGAGTTCACCAA+TGG | + | chr1.1:81768223-81768242 | None:intergenic | 45.0% | |
| GAGCAGGATAGTTTAGGAAC+TGG | + | chr1.1:81768329-81768348 | None:intergenic | 45.0% | |
| GATTCCTGTTATTGGGGGAA+GGG | - | chr1.1:81765293-81765312 | MS.gene029061:intron | 45.0% | |
| GCAATCCATTGCAAAATCCG+AGG | - | chr1.1:81767055-81767074 | MS.gene029061:intron | 45.0% | |
| GCTCAAAGCTGTCTCTTTCA+TGG | + | chr1.1:81764977-81764996 | None:intergenic | 45.0% | |
| GCTGTCTCTTTCATGGGTAA+TGG | + | chr1.1:81764970-81764989 | None:intergenic | 45.0% | |
| GGGGTGTAGTTGCAATTGTT+TGG | - | chr1.1:81766226-81766245 | MS.gene029061:intron | 45.0% | |
| GTACCTCTCTTTGTCCTTCA+CGG | + | chr1.1:81768600-81768619 | None:intergenic | 45.0% | |
| GTTAGCAGGAACACTATGGT+GGG | + | chr1.1:81768022-81768041 | None:intergenic | 45.0% | |
| TCAAACCCTATACCACTAGG+TGG | + | chr1.1:81767674-81767693 | None:intergenic | 45.0% | |
| TCAACACCACCTAGTGGTAT+AGG | - | chr1.1:81767665-81767684 | MS.gene029061:intron | 45.0% | |
| TCAGGAAATCGCTGTTGAAG+TGG | + | chr1.1:81768686-81768705 | None:intergenic | 45.0% | |
| TCATTGCCTGTTATGGGAGT+TGG | - | chr1.1:81768827-81768846 | MS.gene029061:CDS | 45.0% | |
| TCTCTGATTTCTTCCTGCGT+CGG | + | chr1.1:81768080-81768099 | None:intergenic | 45.0% | |
| TCTCTTGTGCTCTCAGCAAT+GGG | - | chr1.1:81767856-81767875 | MS.gene029061:intron | 45.0% | |
| TCTTTGCAGAACAGCATCCA+AGG | - | chr1.1:81768154-81768173 | MS.gene029061:intron | 45.0% | |
| TGCAGGATTCCTGTTATTGG+GGG | - | chr1.1:81765288-81765307 | MS.gene029061:intron | 45.0% | |
| TGTTAGCAGGAACACTATGG+TGG | + | chr1.1:81768023-81768042 | None:intergenic | 45.0% | |
| TGTTATTGGGGGAAGGGAAT+TGG | - | chr1.1:81765299-81765318 | MS.gene029061:intron | 45.0% | |
| TTAACCTGTCGGGATATTGG+GGG | - | chr1.1:81766318-81766337 | MS.gene029061:intron | 45.0% | |
| TTCTCTTGTGCTCTCAGCAA+TGG | - | chr1.1:81767855-81767874 | MS.gene029061:intron | 45.0% | |
| TTGAAGTGACTTCTCGTGGA+GGG | - | chr1.1:81765340-81765359 | MS.gene029061:intron | 45.0% | |
| ! | ATCTCCCTCGGATTTTGCAA+TGG | + | chr1.1:81767063-81767082 | None:intergenic | 45.0% |
| ! | CGCCTCAGTGTCCTATATTT+TGG | + | chr1.1:81765465-81765484 | None:intergenic | 45.0% |
| ! | GAAGCATTTGTAGCCGTTGA+TGG | + | chr1.1:81765792-81765811 | None:intergenic | 45.0% |
| !! | AAAGAGACAGCTTTGAGCCA+TGG | - | chr1.1:81764979-81764998 | MS.gene029061:CDS | 45.0% |
| !! | GAAAACTGCATCTTTGGAGC+AGG | + | chr1.1:81766022-81766041 | None:intergenic | 45.0% |
| !! | TAAATGAAAAATTATAATAA+TGG | - | chr1.1:81767199-81767218 | MS.gene029061:intron | 5.0% |
| AAAACCTCTTCACCGAGGGA+AGG | - | chr1.1:81768179-81768198 | MS.gene029061:intron | 50.0% | |
| AAGCCGTGAAGGACAAAGAG+AGG | - | chr1.1:81768594-81768613 | MS.gene029061:intron | 50.0% | |
| AGGCTAAAACCTCTTCACCG+AGG | - | chr1.1:81768174-81768193 | MS.gene029061:intron | 50.0% | |
| AGGTTGTCGGGGTCATTGAT+GGG | - | chr1.1:81767899-81767918 | MS.gene029061:CDS | 50.0% | |
| ATCATCTTCGGCAGGATCTC+AGG | - | chr1.1:81767879-81767898 | MS.gene029061:intron | 50.0% | |
| CATGGGCACCAAGTTCATGT+AGG | - | chr1.1:81765089-81765108 | MS.gene029061:CDS | 50.0% | |
| GAGAAGCTCCACACTCTCAT+GGG | - | chr1.1:81765072-81765091 | MS.gene029061:CDS | 50.0% | |
| GCAAAGCAAAGACCTTCAGG+CGG | + | chr1.1:81766103-81766122 | None:intergenic | 50.0% | |
| GGAAGGACCGAGAGATTAGT+AGG | - | chr1.1:81768196-81768215 | MS.gene029061:intron | 50.0% | |
| GGATTCCTGTTATTGGGGGA+AGG | - | chr1.1:81765292-81765311 | MS.gene029061:intron | 50.0% | |
| GGCAGACTCTCTTCAAACTC+CGG | - | chr1.1:81768733-81768752 | MS.gene029061:CDS | 50.0% | |
| GGCTAAAACCTCTTCACCGA+GGG | - | chr1.1:81768175-81768194 | MS.gene029061:intron | 50.0% | |
| GTAGGACCATTGGTGAACTC+TGG | - | chr1.1:81768214-81768233 | MS.gene029061:intron | 50.0% | |
| GTTAATTCTGCTCCGCCTGA+AGG | - | chr1.1:81766088-81766107 | MS.gene029061:intron | 50.0% | |
| GTTGAAGTGACTTCTCGTGG+AGG | - | chr1.1:81765339-81765358 | MS.gene029061:intron | 50.0% | |
| TAACCTGTCGGGATATTGGG+GGG | - | chr1.1:81766319-81766338 | MS.gene029061:intron | 50.0% | |
| TAATCTCTCGGTCCTTCCCT+CGG | + | chr1.1:81768194-81768213 | None:intergenic | 50.0% | |
| TCAGCACCAACTCCCATAAC+AGG | + | chr1.1:81768836-81768855 | None:intergenic | 50.0% | |
| TTGCAGTCAACACCACCTAG+TGG | - | chr1.1:81767659-81767678 | MS.gene029061:intron | 50.0% | |
| !! | CGGTGAAGAGGTTTTAGCCT+TGG | + | chr1.1:81768174-81768193 | None:intergenic | 50.0% |
| !!! | CTGTTTGGTTTTGGGTGAGC+AGG | + | chr1.1:81768117-81768136 | None:intergenic | 50.0% |
| AACAACGTGACCGCCTCTGT+CGG | - | chr1.1:81768042-81768061 | MS.gene029061:intron | 55.0% | |
| CAGGTTGTCGGGGTCATTGA+TGG | - | chr1.1:81767898-81767917 | MS.gene029061:CDS | 55.0% | |
| CCAAGTTCATGTAGGCTCCC+TGG | - | chr1.1:81765097-81765116 | MS.gene029061:CDS | 55.0% | |
| CCAGGGAGCCTACATGAACT+TGG | + | chr1.1:81765100-81765119 | None:intergenic | 55.0% | |
| CCGGAGCAGAGTAGTTCAGA+CGG | - | chr1.1:81768752-81768771 | MS.gene029061:CDS | 55.0% | |
| CCGTCTGAACTACTCTGCTC+CGG | + | chr1.1:81768755-81768774 | None:intergenic | 55.0% | |
| CGGTGTGTAGACACACAGTC+AGG | + | chr1.1:81768482-81768501 | None:intergenic | 55.0% | |
| GCAATGGGATCATCTTCGGC+AGG | - | chr1.1:81767871-81767890 | MS.gene029061:intron | 55.0% | |
| GGAGAAGCTCCACACTCTCA+TGG | - | chr1.1:81765071-81765090 | MS.gene029061:CDS | 55.0% | |
| ! | GCGGTCACGTTGTTGTTAGC+AGG | + | chr1.1:81768036-81768055 | None:intergenic | 55.0% |
| ! | GCTGGCAGCACAGGATTTTG+TGG | + | chr1.1:81767997-81768016 | None:intergenic | 55.0% |
| ! | GGAACACTATGGTGGGATGC+TGG | + | chr1.1:81768015-81768034 | None:intergenic | 55.0% |
| ! | TCGGCAGGATCTCAGGTTGT+CGG | - | chr1.1:81767886-81767905 | MS.gene029061:intron | 55.0% |
| !! | ACTTGGTGCCCATGAGAGTG+TGG | + | chr1.1:81765083-81765102 | None:intergenic | 55.0% |
| !! | GCATCTTTGGAGCAGGAGCT+GGG | + | chr1.1:81766015-81766034 | None:intergenic | 55.0% |
| !! | TGCATCTTTGGAGCAGGAGC+TGG | + | chr1.1:81766016-81766035 | None:intergenic | 55.0% |
| ACGATGGACACCGACAGAGG+CGG | + | chr1.1:81768055-81768074 | None:intergenic | 60.0% | |
| TCACCCCCCAATATCCCGAC+AGG | + | chr1.1:81766325-81766344 | None:intergenic | 60.0% | |
| ! | CGGCAGGATCTCAGGTTGTC+GGG | - | chr1.1:81767887-81767906 | MS.gene029061:intron | 60.0% |
| ! | GGCAGGATCTCAGGTTGTCG+GGG | - | chr1.1:81767888-81767907 | MS.gene029061:intron | 60.0% |
| !! | CTTTGGAGCAGGAGCTGGGA+TGG | + | chr1.1:81766011-81766030 | None:intergenic | 60.0% |
| CGGTCCTTCCCTCGGTGAAG+AGG | + | chr1.1:81768186-81768205 | None:intergenic | 65.0% | |
| GCGACGATGGACACCGACAG+AGG | + | chr1.1:81768058-81768077 | None:intergenic | 65.0% | |
| TGGTGGGATGCTGGCAGCAC+AGG | + | chr1.1:81768006-81768025 | None:intergenic | 65.0% | |
| ! | TCTTCCTGCGTCGGCGACGA+TGG | + | chr1.1:81768071-81768090 | None:intergenic | 65.0% |
| GTGTCCATCGTCGCCGACGC+AGG | - | chr1.1:81768064-81768083 | MS.gene029061:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 81764937 | 81768862 | 81764937 | ID=MS.gene029061 |
| chr1.1 | mRNA | 81764937 | 81768862 | 81764937 | ID=MS.gene029061.t1;Parent=MS.gene029061 |
| chr1.1 | exon | 81768693 | 81768862 | 81768693 | ID=MS.gene029061.t1.exon1;Parent=MS.gene029061.t1 |
| chr1.1 | CDS | 81768693 | 81768862 | 81768693 | ID=cds.MS.gene029061.t1;Parent=MS.gene029061.t1 |
| chr1.1 | exon | 81768428 | 81768506 | 81768428 | ID=MS.gene029061.t1.exon2;Parent=MS.gene029061.t1 |
| chr1.1 | CDS | 81768428 | 81768506 | 81768428 | ID=cds.MS.gene029061.t1;Parent=MS.gene029061.t1 |
| chr1.1 | exon | 81767896 | 81768058 | 81767896 | ID=MS.gene029061.t1.exon3;Parent=MS.gene029061.t1 |
| chr1.1 | CDS | 81767896 | 81768058 | 81767896 | ID=cds.MS.gene029061.t1;Parent=MS.gene029061.t1 |
| chr1.1 | exon | 81767690 | 81767812 | 81767690 | ID=MS.gene029061.t1.exon4;Parent=MS.gene029061.t1 |
| chr1.1 | CDS | 81767690 | 81767812 | 81767690 | ID=cds.MS.gene029061.t1;Parent=MS.gene029061.t1 |
| chr1.1 | exon | 81765536 | 81765927 | 81765536 | ID=MS.gene029061.t1.exon5;Parent=MS.gene029061.t1 |
| chr1.1 | CDS | 81765536 | 81765927 | 81765536 | ID=cds.MS.gene029061.t1;Parent=MS.gene029061.t1 |
| chr1.1 | exon | 81764937 | 81765218 | 81764937 | ID=MS.gene029061.t1.exon6;Parent=MS.gene029061.t1 |
| chr1.1 | CDS | 81764937 | 81765218 | 81764937 | ID=cds.MS.gene029061.t1;Parent=MS.gene029061.t1 |
| Gene Sequence |
| Protein sequence |
