Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02913.t1 | XP_024632961.1 | 83.6 | 800 | 103 | 4 | 1 | 772 | 1 | 800 | 0.00E+00 | 1329.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02913.t1 | Q9SZL8 | 26.6 | 636 | 397 | 12 | 32 | 665 | 70 | 637 | 3.9e-60 | 234.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02913.t1 | D3YBB9 | 75.7 | 774 | 168 | 4 | 1 | 764 | 49 | 812 | 0.0e+00 | 1178.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene02913.t1 | TF | FAR1 |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02913.t1 | MTR_0558s0020 | 85.811 | 296 | 41 | 1 | 1 | 295 | 1 | 296 | 0.0 | 533 |
MS.gene02913.t1 | MTR_1g083640 | 81.338 | 284 | 37 | 1 | 1 | 268 | 1 | 284 | 1.23e-165 | 480 |
MS.gene02913.t1 | MTR_8g446020 | 72.542 | 295 | 42 | 1 | 1 | 295 | 1 | 256 | 1.52e-147 | 433 |
MS.gene02913.t1 | MTR_2g014100 | 80.816 | 245 | 38 | 1 | 1 | 236 | 1 | 245 | 2.13e-137 | 407 |
MS.gene02913.t1 | MTR_6g090505 | 81.435 | 237 | 44 | 0 | 65 | 301 | 1 | 237 | 1.16e-135 | 407 |
MS.gene02913.t1 | MTR_6g090505 | 68.627 | 102 | 5 | 3 | 396 | 495 | 230 | 306 | 8.30e-34 | 134 |
MS.gene02913.t1 | MTR_6g090505 | 77.551 | 49 | 11 | 0 | 567 | 615 | 314 | 362 | 2.26e-11 | 66.6 |
MS.gene02913.t1 | MTR_0337s0040 | 71.429 | 259 | 34 | 2 | 1 | 258 | 1 | 220 | 2.34e-119 | 359 |
MS.gene02913.t1 | MTR_3g008240 | 84.236 | 203 | 31 | 1 | 1 | 202 | 1 | 203 | 1.50e-117 | 353 |
MS.gene02913.t1 | MTR_4g040430 | 81.683 | 202 | 33 | 1 | 1 | 202 | 1 | 198 | 1.37e-111 | 338 |
MS.gene02913.t1 | MTR_0337s0060 | 58.228 | 316 | 32 | 4 | 447 | 759 | 21 | 239 | 1.71e-107 | 329 |
MS.gene02913.t1 | MTR_5g071590 | 72.778 | 180 | 36 | 2 | 1 | 167 | 1 | 180 | 2.80e-86 | 271 |
MS.gene02913.t1 | MTR_3g028680 | 81.013 | 158 | 27 | 1 | 618 | 772 | 1 | 158 | 1.27e-83 | 265 |
MS.gene02913.t1 | MTR_1g055240 | 85.915 | 142 | 20 | 0 | 91 | 232 | 3 | 144 | 3.46e-83 | 262 |
MS.gene02913.t1 | MTR_0019s0290 | 79.605 | 152 | 31 | 0 | 82 | 233 | 9 | 160 | 8.07e-81 | 256 |
MS.gene02913.t1 | MTR_2g067090 | 78.065 | 155 | 31 | 1 | 621 | 772 | 99 | 253 | 5.25e-75 | 246 |
MS.gene02913.t1 | MTR_4g133495 | 63.187 | 182 | 41 | 2 | 576 | 754 | 88 | 246 | 1.10e-67 | 225 |
MS.gene02913.t1 | MTR_4g133340 | 63.187 | 182 | 41 | 2 | 576 | 754 | 88 | 246 | 1.10e-67 | 225 |
MS.gene02913.t1 | MTR_1281s0010 | 79.817 | 109 | 22 | 0 | 19 | 127 | 1 | 109 | 6.88e-55 | 184 |
MS.gene02913.t1 | MTR_6g051425 | 32.188 | 320 | 182 | 7 | 40 | 341 | 22 | 324 | 1.72e-38 | 147 |
MS.gene02913.t1 | MTR_4g008820 | 85.000 | 80 | 11 | 1 | 1 | 79 | 125 | 204 | 3.15e-32 | 134 |
MS.gene02913.t1 | MTR_8g046060 | 78.409 | 88 | 10 | 2 | 1 | 79 | 91 | 178 | 6.25e-32 | 124 |
MS.gene02913.t1 | MTR_2g067130 | 67.568 | 74 | 18 | 2 | 702 | 772 | 53 | 123 | 6.65e-22 | 93.6 |
MS.gene02913.t1 | MTR_1g070355 | 26.543 | 324 | 217 | 6 | 41 | 362 | 80 | 384 | 9.50e-20 | 94.4 |
MS.gene02913.t1 | MTR_4g035820 | 23.448 | 290 | 189 | 7 | 17 | 299 | 61 | 324 | 2.68e-14 | 77.4 |
MS.gene02913.t1 | MTR_0337s0050 | 77.778 | 36 | 8 | 0 | 259 | 294 | 14 | 49 | 6.48e-14 | 67.8 |
MS.gene02913.t1 | MTR_0402s0040 | 24.324 | 185 | 121 | 4 | 49 | 233 | 40 | 205 | 2.58e-12 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene02913.t1 | AT4G38180 | 26.258 | 636 | 399 | 12 | 32 | 665 | 70 | 637 | 9.97e-66 | 234 |
MS.gene02913.t1 | AT4G15090 | 25.296 | 676 | 418 | 15 | 50 | 718 | 66 | 661 | 5.66e-57 | 209 |
MS.gene02913.t1 | AT4G15090 | 25.296 | 676 | 418 | 15 | 50 | 718 | 66 | 661 | 5.66e-57 | 209 |
MS.gene02913.t1 | AT4G15090 | 25.296 | 676 | 418 | 15 | 50 | 718 | 66 | 661 | 5.66e-57 | 209 |
MS.gene02913.t1 | AT4G15090 | 25.296 | 676 | 418 | 15 | 50 | 718 | 66 | 661 | 5.66e-57 | 209 |
MS.gene02913.t1 | AT4G15090 | 25.296 | 676 | 418 | 15 | 50 | 718 | 66 | 661 | 5.66e-57 | 209 |
MS.gene02913.t1 | AT2G27110 | 24.444 | 720 | 432 | 18 | 4 | 719 | 23 | 634 | 1.49e-50 | 191 |
MS.gene02913.t1 | AT2G27110 | 24.444 | 720 | 432 | 18 | 4 | 719 | 23 | 634 | 1.49e-50 | 191 |
MS.gene02913.t1 | AT2G27110 | 26.523 | 509 | 317 | 10 | 213 | 719 | 36 | 489 | 3.54e-50 | 188 |
MS.gene02913.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 4.64e-50 | 189 |
MS.gene02913.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 4.64e-50 | 189 |
MS.gene02913.t1 | AT3G06250 | 24.803 | 633 | 353 | 16 | 34 | 661 | 189 | 703 | 4.64e-50 | 189 |
MS.gene02913.t1 | AT1G76320 | 24.556 | 676 | 414 | 18 | 50 | 719 | 12 | 597 | 7.12e-48 | 181 |
MS.gene02913.t1 | AT1G76320 | 24.036 | 674 | 420 | 16 | 50 | 719 | 12 | 597 | 1.91e-47 | 181 |
MS.gene02913.t1 | AT1G76320 | 24.036 | 674 | 420 | 16 | 50 | 719 | 12 | 597 | 1.91e-47 | 181 |
MS.gene02913.t1 | AT1G76320 | 24.036 | 674 | 420 | 16 | 50 | 719 | 12 | 597 | 2.48e-47 | 180 |
MS.gene02913.t1 | AT5G18960 | 23.876 | 645 | 367 | 18 | 24 | 661 | 200 | 727 | 9.55e-45 | 173 |
MS.gene02913.t1 | AT5G18960 | 23.876 | 645 | 367 | 18 | 24 | 661 | 200 | 727 | 9.55e-45 | 173 |
MS.gene02913.t1 | AT3G22170 | 22.815 | 675 | 413 | 17 | 34 | 696 | 69 | 647 | 1.50e-44 | 173 |
MS.gene02913.t1 | AT3G22170 | 22.815 | 675 | 413 | 17 | 34 | 696 | 69 | 647 | 1.50e-44 | 173 |
MS.gene02913.t1 | AT4G38170 | 25.754 | 431 | 262 | 12 | 235 | 662 | 24 | 399 | 2.24e-42 | 163 |
MS.gene02913.t1 | AT1G10240 | 24.598 | 622 | 379 | 19 | 49 | 659 | 62 | 604 | 4.48e-41 | 161 |
MS.gene02913.t1 | AT1G10240 | 24.598 | 622 | 379 | 19 | 49 | 659 | 62 | 604 | 4.48e-41 | 161 |
MS.gene02913.t1 | AT5G28530 | 23.548 | 637 | 394 | 17 | 40 | 660 | 60 | 619 | 1.51e-39 | 156 |
MS.gene02913.t1 | AT5G28530 | 23.391 | 637 | 391 | 18 | 40 | 660 | 60 | 615 | 6.70e-39 | 154 |
MS.gene02913.t1 | AT5G28530 | 23.391 | 637 | 391 | 18 | 40 | 660 | 60 | 615 | 6.70e-39 | 154 |
MS.gene02913.t1 | AT1G80010 | 23.944 | 639 | 391 | 22 | 41 | 662 | 101 | 661 | 9.29e-38 | 151 |
MS.gene02913.t1 | AT2G32250 | 23.333 | 750 | 433 | 23 | 1 | 743 | 8 | 622 | 1.19e-37 | 151 |
MS.gene02913.t1 | AT2G32250 | 23.554 | 726 | 415 | 22 | 25 | 743 | 30 | 622 | 2.36e-37 | 150 |
MS.gene02913.t1 | AT2G32250 | 23.554 | 726 | 415 | 22 | 25 | 743 | 30 | 622 | 2.36e-37 | 150 |
MS.gene02913.t1 | AT2G32250 | 23.554 | 726 | 415 | 22 | 25 | 743 | 30 | 622 | 2.36e-37 | 150 |
MS.gene02913.t1 | AT2G32250 | 23.554 | 726 | 415 | 22 | 25 | 743 | 30 | 622 | 2.47e-37 | 150 |
MS.gene02913.t1 | AT2G32250 | 23.554 | 726 | 415 | 22 | 25 | 743 | 30 | 622 | 2.47e-37 | 150 |
MS.gene02913.t1 | AT2G32250 | 23.521 | 710 | 405 | 21 | 41 | 743 | 3 | 581 | 3.86e-37 | 149 |
MS.gene02913.t1 | AT2G32250 | 23.521 | 710 | 405 | 21 | 41 | 743 | 3 | 581 | 4.70e-37 | 149 |
MS.gene02913.t1 | AT1G52520 | 23.296 | 631 | 392 | 21 | 41 | 662 | 91 | 638 | 3.19e-32 | 134 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 106 | 369 | 5.71e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 438 | 558 | 2.51e-12 | 70.9 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 163 | 426 | 6.06e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.78e-12 | 70.9 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 177 | 440 | 6.36e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 509 | 629 | 2.96e-12 | 70.9 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 163 | 426 | 7.29e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.71e-12 | 70.9 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 163 | 426 | 7.29e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.71e-12 | 70.9 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 163 | 426 | 7.89e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.69e-12 | 70.9 |
MS.gene02913.t1 | AT4G19990 | 27.612 | 268 | 187 | 4 | 219 | 483 | 163 | 426 | 7.89e-25 | 111 |
MS.gene02913.t1 | AT4G19990 | 35.338 | 133 | 72 | 3 | 591 | 721 | 495 | 615 | 2.69e-12 | 70.9 |
Find 113 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCGATGAGTTAACTAATT+TGG | 0.156761 | 2.4:-62048336 | MS.gene02913:CDS |
AGTCGCTTCTTTGACCTAAT+TGG | 0.186128 | 2.4:+62047201 | None:intergenic |
CTTTAGTCATTTCAACATTA+TGG | 0.194287 | 2.4:-62048069 | MS.gene02913:CDS |
TACATTTCAGCTGCCTTTCT+TGG | 0.197151 | 2.4:-62048617 | MS.gene02913:intron |
CAACAAGATTATGCTCTATT+TGG | 0.198611 | 2.4:-62049140 | MS.gene02913:CDS |
TATGGTTTGAGCTTTCTTAT+TGG | 0.242296 | 2.4:+62048490 | None:intergenic |
CATCGTAAGAGTGTGTTATT+TGG | 0.276792 | 2.4:-62048584 | MS.gene02913:CDS |
TTCTTTGACCTAATTGGATT+TGG | 0.299426 | 2.4:+62047207 | None:intergenic |
GGTTTCAAATGTTGATGTTT+TGG | 0.317051 | 2.4:-62047772 | MS.gene02913:CDS |
AATCAGATTTCGACTACAAT+TGG | 0.318540 | 2.4:-62048295 | MS.gene02913:CDS |
TGTTCTTGAGGCAGGGAAAA+AGG | 0.322946 | 2.4:-62047355 | MS.gene02913:CDS |
GTCTTTAGTGCCAACATTCA+TGG | 0.339668 | 2.4:+62047479 | None:intergenic |
ACCAGCCTGGTCTGTGTATA+TGG | 0.341000 | 2.4:+62048472 | None:intergenic |
GCCGATATTTATTGTTTGTT+CGG | 0.341758 | 2.4:+62049090 | None:intergenic |
GAGGGATAATCATGCTGATT+TGG | 0.346844 | 2.4:-62048036 | MS.gene02913:CDS |
TATGCATTGGTCTTCAGTTT+GGG | 0.370760 | 2.4:-62048195 | MS.gene02913:CDS |
CTCAACGGTGTTCTTGAGGC+AGG | 0.386173 | 2.4:-62047363 | MS.gene02913:CDS |
AACAATAAATATCGGCCATT+AGG | 0.388497 | 2.4:-62049083 | MS.gene02913:intron |
TCATGCTGATTTGGACTTCA+AGG | 0.389304 | 2.4:-62048027 | MS.gene02913:CDS |
ACCGAACAAACAATAAATAT+CGG | 0.389395 | 2.4:-62049091 | MS.gene02913:CDS |
GTATGCATTGGTCTTCAGTT+TGG | 0.392120 | 2.4:-62048196 | MS.gene02913:CDS |
TTCTCATACTCAACAAGAAC+TGG | 0.395633 | 2.4:+62049620 | None:intergenic |
AAGAAAGACCAAATCCAATT+AGG | 0.397771 | 2.4:-62047215 | MS.gene02913:CDS |
TTTGGTCTTTCTTTGAACTT+TGG | 0.398856 | 2.4:+62047225 | None:intergenic |
GAGGAGTTTCTTATTTCTAA+AGG | 0.403538 | 2.4:-62047330 | MS.gene02913:CDS |
CCATGATTCTTTATCACTAA+AGG | 0.406174 | 2.4:+62049859 | None:intergenic |
TAAAGAATCATGGAAGTCTT+TGG | 0.408500 | 2.4:-62049849 | MS.gene02913:CDS |
CATGTCGTATGTTTGAGAAC+CGG | 0.411671 | 2.4:-62047647 | MS.gene02913:CDS |
GATTATGATCTTCAAACCTT+GGG | 0.413114 | 2.4:+62047724 | None:intergenic |
ATAACACTGGATTCTCTGTT+AGG | 0.417808 | 2.4:-62049778 | MS.gene02913:CDS |
GGGTTGTCACAGTCGACATT+AGG | 0.419786 | 2.4:-62047689 | MS.gene02913:CDS |
CGATTATGATCTTCAAACCT+TGG | 0.425681 | 2.4:+62047723 | None:intergenic |
AGCTGGAATATATTTGAAGT+TGG | 0.433136 | 2.4:-62049561 | MS.gene02913:CDS |
TGAATGTCTATAAGATATAT+AGG | 0.445219 | 2.4:-62049529 | MS.gene02913:CDS |
GAAAGGGTTGGTTGTAAAGC+TGG | 0.447509 | 2.4:-62049578 | MS.gene02913:CDS |
CGCTTTAAAACATATTGTGC+AGG | 0.447633 | 2.4:+62047546 | None:intergenic |
GCTTTAATAAATTCTAAAGC+TGG | 0.450264 | 2.4:-62049413 | MS.gene02913:CDS |
ATCTGAGAGTGGACAATTGA+CGG | 0.452529 | 2.4:-62049924 | MS.gene02913:CDS |
TGGTCTTTGCTCATGGCACA+TGG | 0.452802 | 2.4:-62048405 | MS.gene02913:CDS |
CTCCTCAAAATAGTATTTGA+AGG | 0.453936 | 2.4:+62047893 | None:intergenic |
ATGTCGTATGTTTGAGAACC+GGG | 0.461344 | 2.4:-62047646 | MS.gene02913:CDS |
GGCCTACTTCAGACTTTAAG+TGG | 0.462107 | 2.4:-62048241 | MS.gene02913:CDS |
ACAAAATAAGAAATCGGATA+AGG | 0.469178 | 2.4:-62049729 | MS.gene02913:CDS |
TTTGAGGAGGACACAACAAA+AGG | 0.469432 | 2.4:-62047879 | MS.gene02913:CDS |
GCTGTCTGTGAGCCATCTGT+TGG | 0.470881 | 2.4:-62047255 | MS.gene02913:CDS |
CTGTCTGTGAGCCATCTGTT+GGG | 0.478819 | 2.4:-62047254 | MS.gene02913:CDS |
TTACAACCAACCCTTTCCTC+TGG | 0.485330 | 2.4:+62049584 | None:intergenic |
TTTAATTATGCATATAACAC+TGG | 0.485542 | 2.4:-62049791 | MS.gene02913:CDS |
TCTAATGACGACTCGTCAAA+AGG | 0.488508 | 2.4:-62049300 | MS.gene02913:CDS |
CAATTCACAAAATAAGAAAT+CGG | 0.490263 | 2.4:-62049735 | MS.gene02913:CDS |
ATGATTGTCAAAACCAAGAA+AGG | 0.491378 | 2.4:+62048604 | None:intergenic |
ATCAGATTTCGACTACAATT+GGG | 0.491708 | 2.4:-62048294 | MS.gene02913:CDS |
ACATTATGGTTCAGAGAATG+AGG | 0.494022 | 2.4:-62048055 | MS.gene02913:CDS |
CGCAAACACATGTAGAAAGC+TGG | 0.494885 | 2.4:+62047412 | None:intergenic |
GACTCGTCAAAAGGAGATAG+TGG | 0.495680 | 2.4:-62049291 | MS.gene02913:CDS |
GACCGCATAAGCTGACTGTT+GGG | 0.496307 | 2.4:+62047975 | None:intergenic |
TGTCTTCTGCAGCATCAACT+TGG | 0.503682 | 2.4:+62049195 | None:intergenic |
CTCATTCAAATCGTATGCAT+TGG | 0.507227 | 2.4:-62048208 | MS.gene02913:CDS |
ATCATAATCGACTTGATGAA+AGG | 0.507955 | 2.4:-62047710 | MS.gene02913:CDS |
TTTAAGTCCGAAAATCGAAA+AGG | 0.508080 | 2.4:+62049329 | None:intergenic |
ATTGGTCTTCAGTTTGGGTG+AGG | 0.509410 | 2.4:-62048190 | MS.gene02913:CDS |
GATCTTCAAACCTTGGGGAA+AGG | 0.519004 | 2.4:+62047730 | None:intergenic |
CAAAATAGTATTTGAAGGAA+AGG | 0.519540 | 2.4:+62047898 | None:intergenic |
TAAAGAATCGAACAAGTGAA+TGG | 0.519618 | 2.4:+62048087 | None:intergenic |
TGTCTATAAGATATATAGGT+GGG | 0.523740 | 2.4:-62049525 | MS.gene02913:CDS |
AAATGCTCTGCTTTATGTAA+TGG | 0.525118 | 2.4:+62049485 | None:intergenic |
TCATAATCGACTTGATGAAA+GGG | 0.526860 | 2.4:-62047709 | MS.gene02913:CDS |
TTGAGGAGGACACAACAAAA+GGG | 0.529908 | 2.4:-62047878 | MS.gene02913:CDS |
CTGAAATCTACCATGAATGT+TGG | 0.534154 | 2.4:-62047489 | MS.gene02913:CDS |
CAGCTGGTTTGAAAATGACT+CGG | 0.538169 | 2.4:-62048157 | MS.gene02913:CDS |
TAACAAAGAAGGTTTCAAGA+AGG | 0.538422 | 2.4:-62049684 | MS.gene02913:CDS |
AATCGAACAAGTGAATGGTC+TGG | 0.540971 | 2.4:+62048092 | None:intergenic |
TGTTATGCTTGTAACAAAGA+AGG | 0.541604 | 2.4:-62049695 | MS.gene02913:CDS |
CCTTTAGTGATAAAGAATCA+TGG | 0.543522 | 2.4:-62049859 | MS.gene02913:CDS |
AACAAAGAAGGTTTCAAGAA+GGG | 0.545537 | 2.4:-62049683 | MS.gene02913:CDS |
CGTCAAAAGGAGATAGTGGC+TGG | 0.549037 | 2.4:-62049287 | MS.gene02913:CDS |
GAGAACATCTTATGAAGTGA+TGG | 0.551307 | 2.4:-62049381 | MS.gene02913:CDS |
ACTTCAACAACGCACCAGCC+TGG | 0.557139 | 2.4:+62048459 | None:intergenic |
TACATGTGTTTGCGCAGATG+CGG | 0.559018 | 2.4:-62047403 | MS.gene02913:CDS |
AATGAAGCTCTCTCGAAACC+AGG | 0.565261 | 2.4:-62049233 | MS.gene02913:CDS |
TGAAAATTCAGTTATTGATG+CGG | 0.565546 | 2.4:-62049900 | MS.gene02913:CDS |
GGGTGAAGGTGTTGGAGGCA+CGG | 0.565649 | 2.4:-62049360 | MS.gene02913:CDS |
GGACCGCATAAGCTGACTGT+TGG | 0.579264 | 2.4:+62047974 | None:intergenic |
ATGTGTTTGCGCAGATGCGG+AGG | 0.585249 | 2.4:-62047400 | MS.gene02913:CDS |
TGGTGTATACTTGTTTACTA+CGG | 0.585960 | 2.4:+62047953 | None:intergenic |
TCAACGGTGTTCTTGAGGCA+GGG | 0.590097 | 2.4:-62047362 | MS.gene02913:CDS |
ACCATATACACAGACCAGGC+TGG | 0.590176 | 2.4:-62048473 | MS.gene02913:CDS |
ATTTCTCAACGGTGTTCTTG+AGG | 0.591378 | 2.4:-62047367 | MS.gene02913:CDS |
GAATGAATTCAAGGAATGAG+TGG | 0.593229 | 2.4:+62046655 | None:intergenic |
TTTGGTGCAGTCCCAACAGA+TGG | 0.595102 | 2.4:+62047243 | None:intergenic |
TGAAGACTTAGAAGGCGTAA+CGG | 0.598405 | 2.4:+62047287 | None:intergenic |
TTGAAGGAAACCTTTCCCCA+AGG | 0.600566 | 2.4:-62047740 | MS.gene02913:CDS |
GAAGTGATGGGTGAAGGTGT+TGG | 0.603704 | 2.4:-62049368 | MS.gene02913:CDS |
ATCCCAACAGTCAGCTTATG+CGG | 0.606153 | 2.4:-62047977 | MS.gene02913:CDS |
ATGTTGATAATGATAATGAG+AGG | 0.609132 | 2.4:-62047794 | MS.gene02913:CDS |
ATATCAACTTCATCTGAGAG+TGG | 0.614980 | 2.4:-62049935 | MS.gene02913:CDS |
AGCCACTTAAAGTCTGAAGT+AGG | 0.617789 | 2.4:+62048239 | None:intergenic |
TGTTGATAATGATAATGAGA+GGG | 0.618346 | 2.4:-62047793 | MS.gene02913:CDS |
AGAACTGGACTGTCACATGT+TGG | 0.620791 | 2.4:+62049635 | None:intergenic |
GTGATGGGTGAAGGTGTTGG+AGG | 0.621481 | 2.4:-62049365 | MS.gene02913:CDS |
ATTATGATCTTCAAACCTTG+GGG | 0.630358 | 2.4:+62047725 | None:intergenic |
GGTCTTTGCTCATGGCACAT+GGG | 0.639768 | 2.4:-62048404 | MS.gene02913:CDS |
AGAACATCTTATGAAGTGAT+GGG | 0.643044 | 2.4:-62049380 | MS.gene02913:CDS |
CATTATGGTTCAGAGAATGA+GGG | 0.643278 | 2.4:-62048054 | MS.gene02913:CDS |
ATGTCTATAAGATATATAGG+TGG | 0.643489 | 2.4:-62049526 | MS.gene02913:CDS |
GATTTCAGCTTATCGACAGA+CGG | 0.644926 | 2.4:+62047504 | None:intergenic |
TCAAACCATATACACAGACC+AGG | 0.646287 | 2.4:-62048477 | MS.gene02913:CDS |
TGAATAAATGAAAAGCAAGA+TGG | 0.655697 | 2.4:+62047933 | None:intergenic |
TCTTATGAAGTGATGGGTGA+AGG | 0.656961 | 2.4:-62049374 | MS.gene02913:CDS |
GCATCTGAAATATTTCTCAA+CGG | 0.661104 | 2.4:-62047378 | MS.gene02913:CDS |
CATGTCGACATAAGAAACCC+CGG | 0.663279 | 2.4:+62047628 | None:intergenic |
TGTCGTATGTTTGAGAACCG+GGG | 0.673760 | 2.4:-62047645 | MS.gene02913:CDS |
GTCAATTCTGATGTAATGCG+CGG | 0.734639 | 2.4:-62046709 | MS.gene02913:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ACGTATTTATTATTATATTT+TGG | - | chr2.4:62049708-62049727 | MS.gene02913:CDS | 10.0% |
!! | TTGAATATTATATTATCTTC+TGG | - | chr2.4:62049654-62049673 | MS.gene02913:CDS | 15.0% |
!!! | TGTTTTTTATGTTATAAGTT+AGG | - | chr2.4:62049532-62049551 | MS.gene02913:CDS | 15.0% |
!! | AAACCAAATTAACAATCTAA+TGG | + | chr2.4:62049741-62049760 | None:intergenic | 20.0% |
!! | AAACCATAATTATGGTTTAA+TGG | + | chr2.4:62049784-62049803 | None:intergenic | 20.0% |
!! | AAACCATTAAACCATAATTA+TGG | - | chr2.4:62049778-62049797 | MS.gene02913:CDS | 20.0% |
!! | AAACCATTAGATTGTTAATT+TGG | - | chr2.4:62049735-62049754 | MS.gene02913:CDS | 20.0% |
!! | AATTCTTGATTGTTATGTAT+TGG | - | chr2.4:62049630-62049649 | MS.gene02913:CDS | 20.0% |
!! | CAATTCACAAAATAAGAAAT+CGG | - | chr2.4:62046872-62046891 | MS.gene02913:intron | 20.0% |
!! | TCTTAACTAAACCATAATTA+TGG | + | chr2.4:62049792-62049811 | None:intergenic | 20.0% |
!! | TGAATGTCTATAAGATATAT+AGG | - | chr2.4:62047078-62047097 | MS.gene02913:intron | 20.0% |
!! | TTTAATTATGCATATAACAC+TGG | - | chr2.4:62046816-62046835 | MS.gene02913:intron | 20.0% |
!!! | AAGACATATCTAGTATTTTT+TGG | - | chr2.4:62047429-62047448 | MS.gene02913:CDS | 20.0% |
!!! | AATTTAATGTTCTGGTTTAT+TGG | - | chr2.4:62047699-62047718 | MS.gene02913:CDS | 20.0% |
!!! | AGACATATCTAGTATTTTTT+GGG | - | chr2.4:62047430-62047449 | MS.gene02913:CDS | 20.0% |
!!! | ATGATGAAAAACTGTTTTAA+TGG | - | chr2.4:62048341-62048360 | MS.gene02913:CDS | 20.0% |
!!! | TGAATGTTTATATTGATTGA+AGG | - | chr2.4:62047671-62047690 | MS.gene02913:CDS | 20.0% |
! | AAAACACCTTGAAAAACATT+CGG | + | chr2.4:62048179-62048198 | None:intergenic | 25.0% |
! | AAAGTGATTATGAAAAAGCT+AGG | - | chr2.4:62049431-62049450 | MS.gene02913:CDS | 25.0% |
! | AAGTGATTATGAAAAAGCTA+GGG | - | chr2.4:62049432-62049451 | MS.gene02913:CDS | 25.0% |
! | ACAAAATAAGAAATCGGATA+AGG | - | chr2.4:62046878-62046897 | MS.gene02913:intron | 25.0% |
! | ACCGAACAAACAATAAATAT+CGG | - | chr2.4:62047516-62047535 | MS.gene02913:CDS | 25.0% |
! | AGTACAAAATACTAACCTAA+TGG | + | chr2.4:62047542-62047561 | None:intergenic | 25.0% |
! | ATGTCTATAAGATATATAGG+TGG | - | chr2.4:62047081-62047100 | MS.gene02913:intron | 25.0% |
! | CAAAATAGTATTTGAAGGAA+AGG | + | chr2.4:62048712-62048731 | None:intergenic | 25.0% |
! | CTTTAGTCATTTCAACATTA+TGG | - | chr2.4:62048538-62048557 | MS.gene02913:CDS | 25.0% |
! | TGAAAATTCAGTTATTGATG+CGG | - | chr2.4:62046707-62046726 | MS.gene02913:CDS | 25.0% |
! | TGAAATTTGAATGAATGTTC+TGG | - | chr2.4:62047589-62047608 | MS.gene02913:CDS | 25.0% |
! | TGAATAAATGAAAAGCAAGA+TGG | + | chr2.4:62048677-62048696 | None:intergenic | 25.0% |
! | TGTCTATAAGATATATAGGT+GGG | - | chr2.4:62047082-62047101 | MS.gene02913:intron | 25.0% |
! | TTTCGATGAGTTAACTAATT+TGG | - | chr2.4:62048271-62048290 | MS.gene02913:CDS | 25.0% |
!! | AGGTTTAGAATTTAATGTTC+TGG | - | chr2.4:62047691-62047710 | MS.gene02913:CDS | 25.0% |
!! | ATTTTCAATTCTGAGTTAAG+TGG | - | chr2.4:62049811-62049830 | MS.gene02913:CDS | 25.0% |
!! | CAAAGTTTTTACAATTGAGA+AGG | - | chr2.4:62048772-62048791 | MS.gene02913:intron | 25.0% |
!! | CTATACATTTTCACATTTGT+TGG | - | chr2.4:62049680-62049699 | MS.gene02913:CDS | 25.0% |
!! | TGTTGTATTTTGTTCTGATT+TGG | - | chr2.4:62047961-62047980 | MS.gene02913:CDS | 25.0% |
!! | TTCCTTCAAATACTATTTTG+AGG | - | chr2.4:62048712-62048731 | MS.gene02913:intron | 25.0% |
!!! | ATGTTGATAATGATAATGAG+AGG | - | chr2.4:62048813-62048832 | MS.gene02913:intron | 25.0% |
!!! | CTTATTTTGTGAATTGTTCT+TGG | + | chr2.4:62046868-62046887 | None:intergenic | 25.0% |
!!! | GCTTTAATAAATTCTAAAGC+TGG | - | chr2.4:62047194-62047213 | MS.gene02913:intron | 25.0% |
!!! | TGAAAAACTGTTTTAATGGA+AGG | - | chr2.4:62048345-62048364 | MS.gene02913:CDS | 25.0% |
!!! | TGTTGATAATGATAATGAGA+GGG | - | chr2.4:62048814-62048833 | MS.gene02913:intron | 25.0% |
AAACACATATGATCTTTCCA+TGG | + | chr2.4:62047762-62047781 | None:intergenic | 30.0% | |
AAATGCTCTGCTTTATGTAA+TGG | + | chr2.4:62047125-62047144 | None:intergenic | 30.0% | |
AACAAAGAAGGTTTCAAGAA+GGG | - | chr2.4:62046924-62046943 | MS.gene02913:intron | 30.0% | |
AACAATAAATATCGGCCATT+AGG | - | chr2.4:62047524-62047543 | MS.gene02913:CDS | 30.0% | |
AAGAAAGACCAAATCCAATT+AGG | - | chr2.4:62049392-62049411 | MS.gene02913:CDS | 30.0% | |
AATCAGATTTCGACTACAAT+TGG | - | chr2.4:62048312-62048331 | MS.gene02913:CDS | 30.0% | |
AGAACATCTTATGAAGTGAT+GGG | - | chr2.4:62047227-62047246 | MS.gene02913:CDS | 30.0% | |
ATAAGTTAGGAAAGATGATG+AGG | - | chr2.4:62049545-62049564 | MS.gene02913:CDS | 30.0% | |
ATCAGATTTCGACTACAATT+GGG | - | chr2.4:62048313-62048332 | MS.gene02913:CDS | 30.0% | |
ATGATTGTCAAAACCAAGAA+AGG | + | chr2.4:62048006-62048025 | None:intergenic | 30.0% | |
ATTATGATCTTCAAACCTTG+GGG | + | chr2.4:62048885-62048904 | None:intergenic | 30.0% | |
CAACAAGATTATGCTCTATT+TGG | - | chr2.4:62047467-62047486 | MS.gene02913:CDS | 30.0% | |
CACAAATTCTAAGTCAAGAT+AGG | + | chr2.4:62047729-62047748 | None:intergenic | 30.0% | |
CCATGATTCTTTATCACTAA+AGG | + | chr2.4:62046751-62046770 | None:intergenic | 30.0% | |
CCTTTAGTGATAAAGAATCA+TGG | - | chr2.4:62046748-62046767 | MS.gene02913:intron | 30.0% | |
CTCCTCAAAATAGTATTTGA+AGG | + | chr2.4:62048717-62048736 | None:intergenic | 30.0% | |
CTGGTATATGTGTGTTAATT+TGG | - | chr2.4:62047628-62047647 | MS.gene02913:CDS | 30.0% | |
GAGAATGCAAAGAAAAATCT+CGG | - | chr2.4:62048227-62048246 | MS.gene02913:CDS | 30.0% | |
GATTATGATCTTCAAACCTT+GGG | + | chr2.4:62048886-62048905 | None:intergenic | 30.0% | |
GCCGATATTTATTGTTTGTT+CGG | + | chr2.4:62047520-62047539 | None:intergenic | 30.0% | |
TAAAGAAAAACCAGAGGAAA+GGG | - | chr2.4:62047013-62047032 | MS.gene02913:intron | 30.0% | |
TAAAGAATCATGGAAGTCTT+TGG | - | chr2.4:62046758-62046777 | MS.gene02913:intron | 30.0% | |
TAAAGAATCGAACAAGTGAA+TGG | + | chr2.4:62048523-62048542 | None:intergenic | 30.0% | |
TAACAAAGAAGGTTTCAAGA+AGG | - | chr2.4:62046923-62046942 | MS.gene02913:intron | 30.0% | |
TATGGTTTGAGCTTTCTTAT+TGG | + | chr2.4:62048120-62048139 | None:intergenic | 30.0% | |
TGGATATCATAGTAAAAACC+TGG | + | chr2.4:62047395-62047414 | None:intergenic | 30.0% | |
TGGTGTATACTTGTTTACTA+CGG | + | chr2.4:62048657-62048676 | None:intergenic | 30.0% | |
TGTTATGCTTGTAACAAAGA+AGG | - | chr2.4:62046912-62046931 | MS.gene02913:intron | 30.0% | |
TTCTTTGACCTAATTGGATT+TGG | + | chr2.4:62049403-62049422 | None:intergenic | 30.0% | |
TTTAAGTCCGAAAATCGAAA+AGG | + | chr2.4:62047281-62047300 | None:intergenic | 30.0% | |
TTTCTATTTACACAGCTCAA+TGG | - | chr2.4:62047920-62047939 | MS.gene02913:CDS | 30.0% | |
! | AGCTGGAATATATTTGAAGT+TGG | - | chr2.4:62047046-62047065 | MS.gene02913:intron | 30.0% |
! | GAATCTTCCTTTTCGATTTT+CGG | - | chr2.4:62047271-62047290 | MS.gene02913:CDS | 30.0% |
! | GCATCTGAAATATTTCTCAA+CGG | - | chr2.4:62049229-62049248 | MS.gene02913:CDS | 30.0% |
! | GGTTTCAAATGTTGATGTTT+TGG | - | chr2.4:62048835-62048854 | MS.gene02913:intron | 30.0% |
! | TCAATTCCGAATGTTTTTCA+AGG | - | chr2.4:62048170-62048189 | MS.gene02913:CDS | 30.0% |
! | TGAGGCTTTAACAATTTAAG+CGG | - | chr2.4:62049501-62049520 | MS.gene02913:CDS | 30.0% |
! | TGAGGCTTTAACTAAAAAAG+CGG | - | chr2.4:62049563-62049582 | MS.gene02913:CDS | 30.0% |
! | TTTGGTCTTTCTTTGAACTT+TGG | + | chr2.4:62049385-62049404 | None:intergenic | 30.0% |
!! | ATCATAATCGACTTGATGAA+AGG | - | chr2.4:62048897-62048916 | MS.gene02913:intron | 30.0% |
!! | ATGTTCTGGTTTAGAATTGA+AGG | - | chr2.4:62047603-62047622 | MS.gene02913:CDS | 30.0% |
!! | CTTCAAATACTATTTTGAGG+AGG | - | chr2.4:62048715-62048734 | MS.gene02913:intron | 30.0% |
!! | GAGGAGTTTCTTATTTCTAA+AGG | - | chr2.4:62049277-62049296 | MS.gene02913:CDS | 30.0% |
!! | TCATAATCGACTTGATGAAA+GGG | - | chr2.4:62048898-62048917 | MS.gene02913:intron | 30.0% |
!! | TCGACATGTTTTCAAGATTT+TGG | - | chr2.4:62048994-62049013 | MS.gene02913:intron | 30.0% |
!!! | CTGCACAATATGTTTTAAAG+CGG | - | chr2.4:62049062-62049081 | MS.gene02913:intron | 30.0% |
!!! | GTTTTTCAAGGTGTTTTTCA+TGG | - | chr2.4:62048182-62048201 | MS.gene02913:CDS | 30.0% |
!!! | TTCAAGATTTTGGAGTTCTT+AGG | - | chr2.4:62049004-62049023 | MS.gene02913:intron | 30.0% |
ACATTATGGTTCAGAGAATG+AGG | - | chr2.4:62048552-62048571 | MS.gene02913:CDS | 35.0% | |
ATAACACTGGATTCTCTGTT+AGG | - | chr2.4:62046829-62046848 | MS.gene02913:intron | 35.0% | |
ATATCAACTTCATCTGAGAG+TGG | - | chr2.4:62046672-62046691 | MS.gene02913:CDS | 35.0% | |
CATTATGGTTCAGAGAATGA+GGG | - | chr2.4:62048553-62048572 | MS.gene02913:CDS | 35.0% | |
CGATTATGATCTTCAAACCT+TGG | + | chr2.4:62048887-62048906 | None:intergenic | 35.0% | |
CTAAAGAAAAACCAGAGGAA+AGG | - | chr2.4:62047012-62047031 | MS.gene02913:intron | 35.0% | |
CTCATTCAAATCGTATGCAT+TGG | - | chr2.4:62048399-62048418 | MS.gene02913:CDS | 35.0% | |
CTGAAATCTACCATGAATGT+TGG | - | chr2.4:62049118-62049137 | MS.gene02913:CDS | 35.0% | |
GAAAGCTAAAGAAAAACCAG+AGG | - | chr2.4:62047007-62047026 | MS.gene02913:intron | 35.0% | |
GAAGCAAAAGAAAGATGATG+AGG | - | chr2.4:62049483-62049502 | MS.gene02913:CDS | 35.0% | |
GACAGAAATTCCTTATAGCT+CGG | - | chr2.4:62049458-62049477 | MS.gene02913:CDS | 35.0% | |
GAGAACATCTTATGAAGTGA+TGG | - | chr2.4:62047226-62047245 | MS.gene02913:CDS | 35.0% | |
GTCTGCTTAATCCTAAAAAC+AGG | - | chr2.4:62046949-62046968 | MS.gene02913:intron | 35.0% | |
TTCTCATACTCAACAAGAAC+TGG | + | chr2.4:62046990-62047009 | None:intergenic | 35.0% | |
! | CATCGTAAGAGTGTGTTATT+TGG | - | chr2.4:62048023-62048042 | MS.gene02913:CDS | 35.0% |
! | GAGGCTTTAACAATTTAAGC+GGG | - | chr2.4:62049502-62049521 | MS.gene02913:CDS | 35.0% |
! | TCTTTCAATGCTTTTCTTCG+TGG | - | chr2.4:62048482-62048501 | MS.gene02913:CDS | 35.0% |
! | TTTTTCATGGTCTTTGCTCA+TGG | - | chr2.4:62048195-62048214 | MS.gene02913:CDS | 35.0% |
!! | ACTGCTTTTGAAGACTTAGA+AGG | + | chr2.4:62049331-62049350 | None:intergenic | 35.0% |
!! | CGCTTTAAAACATATTGTGC+AGG | + | chr2.4:62049064-62049083 | None:intergenic | 35.0% |
!! | TATGCATTGGTCTTCAGTTT+GGG | - | chr2.4:62048412-62048431 | MS.gene02913:CDS | 35.0% |
!!! | AAGATTTTGGAGTTCTTAGG+TGG | - | chr2.4:62049007-62049026 | MS.gene02913:intron | 35.0% |
!!! | AGACATCAGCTACTTTTGAT+TGG | - | chr2.4:62048066-62048085 | MS.gene02913:CDS | 35.0% |
!!! | CACAATATGTTTTAAAGCGG+TGG | - | chr2.4:62049065-62049084 | MS.gene02913:intron | 35.0% |
!!! | TCTAGTATTTTTTGGGCAGA+TGG | - | chr2.4:62047437-62047456 | MS.gene02913:CDS | 35.0% |
AATCGAACAAGTGAATGGTC+TGG | + | chr2.4:62048518-62048537 | None:intergenic | 40.0% | |
ACCTATGATCTTTGCATAGC+TGG | + | chr2.4:62047860-62047879 | None:intergenic | 40.0% | |
AGTCGCTTCTTTGACCTAAT+TGG | + | chr2.4:62049409-62049428 | None:intergenic | 40.0% | |
ATCTGAGAGTGGACAATTGA+CGG | - | chr2.4:62046683-62046702 | MS.gene02913:CDS | 40.0% | |
ATGTCGTATGTTTGAGAACC+GGG | - | chr2.4:62048961-62048980 | MS.gene02913:intron | 40.0% | |
ATTTCTCAACGGTGTTCTTG+AGG | - | chr2.4:62049240-62049259 | MS.gene02913:CDS | 40.0% | |
CATGTCGTATGTTTGAGAAC+CGG | - | chr2.4:62048960-62048979 | MS.gene02913:intron | 40.0% | |
GATTTCAGCTTATCGACAGA+CGG | + | chr2.4:62049106-62049125 | None:intergenic | 40.0% | |
GTCAATTCTGATGTAATGCG+CGG | - | chr2.4:62049898-62049917 | MS.gene02913:CDS | 40.0% | |
GTCTTTAGTGCCAACATTCA+TGG | + | chr2.4:62049131-62049150 | None:intergenic | 40.0% | |
TACATTTCAGCTGCCTTTCT+TGG | - | chr2.4:62047990-62048009 | MS.gene02913:CDS | 40.0% | |
TCAAACCATATACACAGACC+AGG | - | chr2.4:62048130-62048149 | MS.gene02913:CDS | 40.0% | |
TCCAGCTATGCAAAGATCAT+AGG | - | chr2.4:62047856-62047875 | MS.gene02913:CDS | 40.0% | |
TCTAATGACGACTCGTCAAA+AGG | - | chr2.4:62047307-62047326 | MS.gene02913:CDS | 40.0% | |
TTGAGGAGGACACAACAAAA+GGG | - | chr2.4:62048729-62048748 | MS.gene02913:intron | 40.0% | |
TTTGAGGAGGACACAACAAA+AGG | - | chr2.4:62048728-62048747 | MS.gene02913:intron | 40.0% | |
TTTGCTTCTTCCGAGCTATA+AGG | + | chr2.4:62049471-62049490 | None:intergenic | 40.0% | |
! | AGCCACTTAAAGTCTGAAGT+AGG | + | chr2.4:62048371-62048390 | None:intergenic | 40.0% |
! | GAGGGATAATCATGCTGATT+TGG | - | chr2.4:62048571-62048590 | MS.gene02913:CDS | 40.0% |
! | TGAAGACTTAGAAGGCGTAA+CGG | + | chr2.4:62049323-62049342 | None:intergenic | 40.0% |
! | TGGTTTAGAATTGAAGGCTC+TGG | - | chr2.4:62047609-62047628 | MS.gene02913:CDS | 40.0% |
!! | CAGCTGGTTTGAAAATGACT+CGG | - | chr2.4:62048450-62048469 | MS.gene02913:CDS | 40.0% |
!! | GTATGCATTGGTCTTCAGTT+TGG | - | chr2.4:62048411-62048430 | MS.gene02913:CDS | 40.0% |
!! | GTTTTGGATGCAGAACTTGA+AGG | - | chr2.4:62048851-62048870 | MS.gene02913:intron | 40.0% |
!! | TCACATGTTGGCCTGTTTTT+AGG | + | chr2.4:62046963-62046982 | None:intergenic | 40.0% |
!! | TCATGCTGATTTGGACTTCA+AGG | - | chr2.4:62048580-62048599 | MS.gene02913:CDS | 40.0% |
!! | TCTTATGAAGTGATGGGTGA+AGG | - | chr2.4:62047233-62047252 | MS.gene02913:CDS | 40.0% |
AATGAAGCTCTCTCGAAACC+AGG | - | chr2.4:62047374-62047393 | MS.gene02913:CDS | 45.0% | |
AGAACTGGACTGTCACATGT+TGG | + | chr2.4:62046975-62046994 | None:intergenic | 45.0% | |
ATCCCAACAGTCAGCTTATG+CGG | - | chr2.4:62048630-62048649 | MS.gene02913:intron | 45.0% | |
ATTTGTGCTCTGTACAGCCA+TGG | - | chr2.4:62047742-62047761 | MS.gene02913:CDS | 45.0% | |
CATGTCGACATAAGAAACCC+CGG | + | chr2.4:62048982-62049001 | None:intergenic | 45.0% | |
CGCAAACACATGTAGAAAGC+TGG | + | chr2.4:62049198-62049217 | None:intergenic | 45.0% | |
GAAAAACCAGAGGAAAGGGT+TGG | - | chr2.4:62047017-62047036 | MS.gene02913:intron | 45.0% | |
GACTCGTCAAAAGGAGATAG+TGG | - | chr2.4:62047316-62047335 | MS.gene02913:CDS | 45.0% | |
GATCTTCAAACCTTGGGGAA+AGG | + | chr2.4:62048880-62048899 | None:intergenic | 45.0% | |
GGCCTACTTCAGACTTTAAG+TGG | - | chr2.4:62048366-62048385 | MS.gene02913:CDS | 45.0% | |
TACATGTGTTTGCGCAGATG+CGG | - | chr2.4:62049204-62049223 | MS.gene02913:CDS | 45.0% | |
TGTCGTATGTTTGAGAACCG+GGG | - | chr2.4:62048962-62048981 | MS.gene02913:intron | 45.0% | |
TGTCTTCTGCAGCATCAACT+TGG | + | chr2.4:62047415-62047434 | None:intergenic | 45.0% | |
TGTTCTTGAGGCAGGGAAAA+AGG | - | chr2.4:62049252-62049271 | MS.gene02913:CDS | 45.0% | |
TTACAACCAACCCTTTCCTC+TGG | + | chr2.4:62047026-62047045 | None:intergenic | 45.0% | |
TTGAAGGAAACCTTTCCCCA+AGG | - | chr2.4:62048867-62048886 | MS.gene02913:intron | 45.0% | |
! | GTGAGGTCACATTTTACAGC+TGG | - | chr2.4:62048434-62048453 | MS.gene02913:CDS | 45.0% |
!! | ATTGGTCTTCAGTTTGGGTG+AGG | - | chr2.4:62048417-62048436 | MS.gene02913:CDS | 45.0% |
!! | GAAAGGGTTGGTTGTAAAGC+TGG | - | chr2.4:62047029-62047048 | MS.gene02913:intron | 45.0% |
ACCAGCCTGGTCTGTGTATA+TGG | + | chr2.4:62048138-62048157 | None:intergenic | 50.0% | |
ACCATATACACAGACCAGGC+TGG | - | chr2.4:62048134-62048153 | MS.gene02913:CDS | 50.0% | |
CTGTCTGTGAGCCATCTGTT+GGG | - | chr2.4:62049353-62049372 | MS.gene02913:CDS | 50.0% | |
GACCGCATAAGCTGACTGTT+GGG | + | chr2.4:62048635-62048654 | None:intergenic | 50.0% | |
GGGTTGTCACAGTCGACATT+AGG | - | chr2.4:62048918-62048937 | MS.gene02913:intron | 50.0% | |
GGTCTTTGCTCATGGCACAT+GGG | - | chr2.4:62048203-62048222 | MS.gene02913:CDS | 50.0% | |
TCAACGGTGTTCTTGAGGCA+GGG | - | chr2.4:62049245-62049264 | MS.gene02913:CDS | 50.0% | |
TGGTCTTTGCTCATGGCACA+TGG | - | chr2.4:62048202-62048221 | MS.gene02913:CDS | 50.0% | |
! | CGTCAAAAGGAGATAGTGGC+TGG | - | chr2.4:62047320-62047339 | MS.gene02913:CDS | 50.0% |
! | TTTGGTGCAGTCCCAACAGA+TGG | + | chr2.4:62049367-62049386 | None:intergenic | 50.0% |
!! | GAAGTGATGGGTGAAGGTGT+TGG | - | chr2.4:62047239-62047258 | MS.gene02913:CDS | 50.0% |
ACTTCAACAACGCACCAGCC+TGG | + | chr2.4:62048151-62048170 | None:intergenic | 55.0% | |
ATGTGTTTGCGCAGATGCGG+AGG | - | chr2.4:62049207-62049226 | MS.gene02913:CDS | 55.0% | |
CTCAACGGTGTTCTTGAGGC+AGG | - | chr2.4:62049244-62049263 | MS.gene02913:CDS | 55.0% | |
GCTGTCTGTGAGCCATCTGT+TGG | - | chr2.4:62049352-62049371 | MS.gene02913:CDS | 55.0% | |
GGACCGCATAAGCTGACTGT+TGG | + | chr2.4:62048636-62048655 | None:intergenic | 55.0% | |
TGAGGCAGGGAAAAAGGCAG+AGG | - | chr2.4:62049258-62049277 | MS.gene02913:CDS | 55.0% | |
!! | GTGATGGGTGAAGGTGTTGG+AGG | - | chr2.4:62047242-62047261 | MS.gene02913:CDS | 55.0% |
!! | GGGTGAAGGTGTTGGAGGCA+CGG | - | chr2.4:62047247-62047266 | MS.gene02913:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.4 | gene | 62046663 | 62049966 | 62046663 | ID=MS.gene02913 |
chr2.4 | mRNA | 62046663 | 62049966 | 62046663 | ID=MS.gene02913.t1;Parent=MS.gene02913 |
chr2.4 | exon | 62049084 | 62049966 | 62049084 | ID=MS.gene02913.t1.exon1;Parent=MS.gene02913.t1 |
chr2.4 | CDS | 62049084 | 62049966 | 62049084 | ID=cds.MS.gene02913.t1;Parent=MS.gene02913.t1 |
chr2.4 | exon | 62047196 | 62048629 | 62047196 | ID=MS.gene02913.t1.exon2;Parent=MS.gene02913.t1 |
chr2.4 | CDS | 62047196 | 62048629 | 62047196 | ID=cds.MS.gene02913.t1;Parent=MS.gene02913.t1 |
chr2.4 | exon | 62046663 | 62046739 | 62046663 | ID=MS.gene02913.t1.exon3;Parent=MS.gene02913.t1 |
chr2.4 | CDS | 62046663 | 62046739 | 62046663 | ID=cds.MS.gene02913.t1;Parent=MS.gene02913.t1 |
Gene Sequence |
Protein sequence |