Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02922.t1 | XP_024631359.1 | 94.5 | 697 | 36 | 1 | 1 | 697 | 1 | 695 | 0.00E+00 | 1352 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02922.t1 | Q9LKR4 | 56.7 | 670 | 284 | 3 | 5 | 670 | 8 | 675 | 1.2e-219 | 764.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02922.t1 | A0A396J3Q9 | 94.5 | 697 | 36 | 1 | 1 | 697 | 1 | 695 | 0.0e+00 | 1352.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene02922.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02922.t1 | MTR_3g450850 | 45.600 | 250 | 117 | 3 | 54 | 295 | 48 | 286 | 7.58e-64 | 216 |
| MS.gene02922.t1 | MTR_4g035820 | 35.636 | 275 | 161 | 5 | 40 | 311 | 63 | 324 | 1.14e-45 | 173 |
| MS.gene02922.t1 | MTR_6g051425 | 28.617 | 311 | 196 | 8 | 31 | 336 | 2 | 291 | 6.75e-25 | 107 |
| MS.gene02922.t1 | MTR_3g012160 | 44.660 | 103 | 47 | 1 | 194 | 296 | 1 | 93 | 3.70e-23 | 94.7 |
| MS.gene02922.t1 | MTR_1g070355 | 28.340 | 247 | 148 | 7 | 59 | 297 | 80 | 305 | 2.84e-19 | 92.4 |
| MS.gene02922.t1 | MTR_5g076070 | 26.141 | 241 | 163 | 5 | 56 | 295 | 56 | 282 | 1.72e-16 | 80.9 |
| MS.gene02922.t1 | MTR_6g014355 | 38.931 | 131 | 68 | 3 | 126 | 254 | 13 | 133 | 1.99e-16 | 80.1 |
| MS.gene02922.t1 | MTR_6g022080 | 30.070 | 143 | 89 | 3 | 65 | 202 | 97 | 233 | 9.85e-12 | 66.2 |
| MS.gene02922.t1 | MTR_7g446520 | 24.280 | 243 | 149 | 5 | 59 | 298 | 94 | 304 | 1.16e-11 | 67.0 |
| MS.gene02922.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 67 | 166 | 1.63e-11 | 64.7 |
| MS.gene02922.t1 | MTR_2g101460 | 38.235 | 102 | 60 | 2 | 65 | 165 | 57 | 156 | 1.89e-11 | 64.3 |
| MS.gene02922.t1 | MTR_3g095940 | 51.724 | 58 | 28 | 0 | 499 | 556 | 86 | 143 | 3.00e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02922.t1 | AT5G28530 | 56.907 | 666 | 285 | 2 | 5 | 670 | 8 | 671 | 0.0 | 790 |
| MS.gene02922.t1 | AT5G28530 | 56.907 | 666 | 285 | 2 | 5 | 670 | 8 | 671 | 0.0 | 790 |
| MS.gene02922.t1 | AT5G28530 | 56.716 | 670 | 284 | 3 | 5 | 670 | 8 | 675 | 0.0 | 786 |
| MS.gene02922.t1 | AT5G28530 | 50.149 | 670 | 265 | 5 | 5 | 670 | 8 | 612 | 0.0 | 656 |
| MS.gene02922.t1 | AT5G28530 | 48.498 | 666 | 278 | 5 | 5 | 670 | 8 | 608 | 0.0 | 633 |
| MS.gene02922.t1 | AT1G10240 | 42.406 | 665 | 354 | 8 | 30 | 678 | 24 | 675 | 0.0 | 545 |
| MS.gene02922.t1 | AT1G10240 | 42.406 | 665 | 354 | 8 | 30 | 678 | 24 | 675 | 0.0 | 545 |
| MS.gene02922.t1 | AT4G38180 | 30.743 | 592 | 380 | 12 | 51 | 627 | 71 | 647 | 2.50e-70 | 244 |
| MS.gene02922.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 3.45e-62 | 223 |
| MS.gene02922.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 3.45e-62 | 223 |
| MS.gene02922.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 3.45e-62 | 223 |
| MS.gene02922.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 3.45e-62 | 223 |
| MS.gene02922.t1 | AT4G15090 | 26.553 | 644 | 422 | 15 | 51 | 670 | 49 | 665 | 3.45e-62 | 223 |
| MS.gene02922.t1 | AT2G27110 | 27.903 | 620 | 369 | 19 | 30 | 622 | 19 | 587 | 3.50e-57 | 209 |
| MS.gene02922.t1 | AT2G27110 | 27.903 | 620 | 369 | 19 | 30 | 622 | 19 | 587 | 3.50e-57 | 209 |
| MS.gene02922.t1 | AT3G06250 | 26.667 | 615 | 354 | 18 | 27 | 612 | 155 | 701 | 5.73e-51 | 190 |
| MS.gene02922.t1 | AT3G06250 | 26.667 | 615 | 354 | 18 | 27 | 612 | 155 | 701 | 5.73e-51 | 190 |
| MS.gene02922.t1 | AT3G06250 | 26.667 | 615 | 354 | 18 | 27 | 612 | 155 | 701 | 5.73e-51 | 190 |
| MS.gene02922.t1 | AT5G18960 | 26.801 | 597 | 361 | 17 | 31 | 612 | 190 | 725 | 1.70e-49 | 186 |
| MS.gene02922.t1 | AT5G18960 | 26.801 | 597 | 361 | 17 | 31 | 612 | 190 | 725 | 1.70e-49 | 186 |
| MS.gene02922.t1 | AT2G27110 | 30.467 | 407 | 258 | 10 | 234 | 622 | 43 | 442 | 2.79e-49 | 184 |
| MS.gene02922.t1 | AT3G22170 | 25.213 | 587 | 377 | 16 | 51 | 613 | 68 | 616 | 3.11e-49 | 186 |
| MS.gene02922.t1 | AT3G22170 | 25.213 | 587 | 377 | 16 | 51 | 613 | 68 | 616 | 3.11e-49 | 186 |
| MS.gene02922.t1 | AT1G76320 | 26.138 | 681 | 421 | 23 | 57 | 696 | 1 | 640 | 5.13e-48 | 180 |
| MS.gene02922.t1 | AT1G76320 | 25.877 | 684 | 419 | 23 | 57 | 696 | 1 | 640 | 1.16e-47 | 180 |
| MS.gene02922.t1 | AT1G76320 | 25.877 | 684 | 419 | 23 | 57 | 696 | 1 | 640 | 1.16e-47 | 180 |
| MS.gene02922.t1 | AT1G76320 | 25.877 | 684 | 419 | 23 | 57 | 696 | 1 | 640 | 1.40e-47 | 179 |
| MS.gene02922.t1 | AT1G52520 | 24.730 | 647 | 422 | 22 | 52 | 668 | 84 | 695 | 1.32e-41 | 162 |
| MS.gene02922.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 5.16e-39 | 154 |
| MS.gene02922.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 5.16e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 5.52e-39 | 154 |
| MS.gene02922.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 5.89e-39 | 154 |
| MS.gene02922.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 38 | 593 | 6.22e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 146 | 586 | 7.33e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 8.09e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 8.09e-39 | 154 |
| MS.gene02922.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 8.64e-39 | 154 |
| MS.gene02922.t1 | AT4G19990 | 24.795 | 609 | 373 | 14 | 56 | 632 | 24 | 579 | 8.64e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 146 | 586 | 8.64e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 9.17e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 9.17e-39 | 154 |
| MS.gene02922.t1 | AT2G32250 | 25.393 | 445 | 311 | 10 | 258 | 685 | 187 | 627 | 9.17e-39 | 154 |
| MS.gene02922.t1 | AT1G80010 | 23.468 | 669 | 439 | 19 | 28 | 657 | 72 | 706 | 2.71e-38 | 152 |
| MS.gene02922.t1 | AT4G19990 | 24.294 | 531 | 334 | 11 | 119 | 632 | 43 | 522 | 3.81e-34 | 139 |
| MS.gene02922.t1 | AT4G38170 | 26.446 | 363 | 254 | 6 | 272 | 622 | 45 | 406 | 9.25e-34 | 137 |
Find 131 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCCAAATGGTTTCTGATTT+TGG | 0.102866 | 2.4:+62171385 | MS.gene02922:CDS |
| CAGAGGAATTTGAACTTAAA+TGG | 0.181226 | 2.4:+62171362 | MS.gene02922:CDS |
| TTATCTGCTTTCACCGATTC+TGG | 0.206477 | 2.4:-62170145 | None:intergenic |
| TCTTATCGATCGATCACTTA+TGG | 0.237164 | 2.4:+62170925 | MS.gene02922:CDS |
| AGGTGGACATTTGTCTTTCT+TGG | 0.238238 | 2.4:+62170651 | MS.gene02922:CDS |
| CCATTTGCCTTCCTCTTAAC+CGG | 0.251085 | 2.4:-62170358 | None:intergenic |
| AAGCCTTCAAACTAGCTATT+TGG | 0.254902 | 2.4:-62172641 | None:intergenic |
| CGTGCATAATCACGAGCTTT+TGG | 0.255977 | 2.4:+62170492 | MS.gene02922:CDS |
| TGTATTCAGTTCGAGCATAT+TGG | 0.297881 | 2.4:+62171437 | MS.gene02922:CDS |
| GAAAAGGGAAAATGATGTTT+TGG | 0.322914 | 2.4:+62170744 | MS.gene02922:CDS |
| GTATTCAGTTCGAGCATATT+GGG | 0.339529 | 2.4:+62171438 | MS.gene02922:CDS |
| GCTTTCGAAAGCTGGGTTTC+CGG | 0.342293 | 2.4:+62170585 | MS.gene02922:CDS |
| ATACTCTTGCTTTCGAAAGC+TGG | 0.354980 | 2.4:+62170577 | MS.gene02922:CDS |
| AAATCGAAAGAAGGTTATTC+AGG | 0.356354 | 2.4:+62170699 | MS.gene02922:CDS |
| TTCTTTCATCAGTTCTTTGC+GGG | 0.358476 | 2.4:-62172528 | None:intergenic |
| ATTGAATGTGGATTTAAATT+CGG | 0.362006 | 2.4:-62171317 | None:intergenic |
| TGCAAGGAATTTGAATCATC+GGG | 0.363156 | 2.4:+62172284 | MS.gene02922:CDS |
| TACCAAACCACACTCCAAAA+AGG | 0.366681 | 2.4:-62170951 | None:intergenic |
| CTCAGGAAATTCACTTCTAA+TGG | 0.369848 | 2.4:-62171215 | None:intergenic |
| AACAATGTCCTTGTGGAGAT+TGG | 0.375018 | 2.4:+62170071 | MS.gene02922:CDS |
| TTAAACACCATTCCAACATA+AGG | 0.399971 | 2.4:-62170196 | None:intergenic |
| TCTAGAATTAGCCCTCAATT+AGG | 0.402768 | 2.4:+62170292 | MS.gene02922:CDS |
| AGGCATTGCTTAATGAGAAA+AGG | 0.415782 | 2.4:+62170728 | MS.gene02922:CDS |
| GTCATCATCTGCTTCTTTCG+CGG | 0.417036 | 2.4:-62170788 | None:intergenic |
| TCTAATGGCATCTTTAAGTC+CGG | 0.417527 | 2.4:-62171200 | None:intergenic |
| TAAACACCATTCCAACATAA+GGG | 0.418566 | 2.4:-62170195 | None:intergenic |
| CCGGGTTTGCCCCGGTTAAG+AGG | 0.420690 | 2.4:+62170347 | MS.gene02922:CDS |
| GAAAATATAGCTTGGTCATA+TGG | 0.423296 | 2.4:+62170850 | MS.gene02922:CDS |
| CCACGTTTAAAGATCGTTCT+CGG | 0.425296 | 2.4:-62172391 | None:intergenic |
| GACATCTTCCTTTCATGAAC+CGG | 0.427391 | 2.4:-62171150 | None:intergenic |
| GAAAATGCTTGAGCTTGAAA+AGG | 0.428355 | 2.4:+62170621 | MS.gene02922:CDS |
| GTCCAAAATCAGAAACCATT+TGG | 0.428679 | 2.4:-62171387 | None:intergenic |
| ATTTCTCAGCAATAAAACTT+TGG | 0.431448 | 2.4:-62172430 | None:intergenic |
| CGGTTAAGAGGAAGGCAAAT+GGG | 0.435855 | 2.4:+62170359 | MS.gene02922:CDS |
| TGCTAAAATGTATCTGTCTA+AGG | 0.437024 | 2.4:+62170423 | MS.gene02922:CDS |
| ACAAATACTACTTAAGTAGA+TGG | 0.437071 | 2.4:+62172366 | MS.gene02922:CDS |
| TACTCTTGCTTTCGAAAGCT+GGG | 0.437822 | 2.4:+62170578 | MS.gene02922:CDS |
| GTTAATAAGAATGTCGTGTT+TGG | 0.444083 | 2.4:+62170880 | MS.gene02922:CDS |
| GAGCTTGAAAAGGGAATTCA+AGG | 0.444538 | 2.4:+62170631 | MS.gene02922:CDS |
| CGATGCTTTGCAGCAAGAGT+TGG | 0.446058 | 2.4:+62172136 | MS.gene02922:CDS |
| CTACTTAAGTAGTATTTGTC+GGG | 0.448293 | 2.4:-62172362 | None:intergenic |
| CATTTGCCTTCCTCTTAACC+GGG | 0.453188 | 2.4:-62170357 | None:intergenic |
| CTTCAAAAGACGTATGGATT+CGG | 0.455725 | 2.4:+62170044 | MS.gene02922:CDS |
| ACATTTGTCTTTCTTGGAAA+GGG | 0.456261 | 2.4:+62170657 | MS.gene02922:CDS |
| CAATATACAAATCTTAGAAC+TGG | 0.459994 | 2.4:+62172065 | MS.gene02922:CDS |
| CTCCGCGCATGCTCTTCAAT+TGG | 0.460247 | 2.4:-62172092 | None:intergenic |
| AACCTTCTCATTCTCATCCA+TGG | 0.461287 | 2.4:-62170827 | None:intergenic |
| GTTCTTTCATCAGTTCTTTG+CGG | 0.462201 | 2.4:-62172529 | None:intergenic |
| CTAATGGCATCTTTAAGTCC+GGG | 0.464686 | 2.4:-62171199 | None:intergenic |
| CCTTGATGCAGGTGTTTCTC+CGG | 0.465256 | 2.4:+62171131 | MS.gene02922:intron |
| TTCTAAACAAGGTATCTAGT+TGG | 0.469074 | 2.4:+62171266 | MS.gene02922:CDS |
| ATGGGGAGCATCATAGAGAT+AGG | 0.469186 | 2.4:+62170377 | MS.gene02922:CDS |
| TGTGTTATGGCTACCAGAAA+AGG | 0.470494 | 2.4:+62172244 | MS.gene02922:CDS |
| GGCATTGCTTAATGAGAAAA+GGG | 0.476407 | 2.4:+62170729 | MS.gene02922:CDS |
| TTATCGATCCGGGTTTGCCC+CGG | 0.478798 | 2.4:+62170339 | MS.gene02922:CDS |
| AGGTTCTGCAGCACCAGAAT+CGG | 0.478841 | 2.4:+62170132 | MS.gene02922:CDS |
| CTGTCTAAGGAGGTTGTTGA+CGG | 0.480756 | 2.4:+62170436 | MS.gene02922:CDS |
| GATATCATTACCCCTTATGT+TGG | 0.483803 | 2.4:+62170184 | MS.gene02922:CDS |
| CCTCTTAACCGGGGCAAACC+CGG | 0.485059 | 2.4:-62170347 | None:intergenic |
| CCGGTTAAGAGGAAGGCAAA+TGG | 0.486458 | 2.4:+62170358 | MS.gene02922:CDS |
| TCTACTTAAGTAGTATTTGT+CGG | 0.487675 | 2.4:-62172363 | None:intergenic |
| GACATTTGTCTTTCTTGGAA+AGG | 0.490686 | 2.4:+62170656 | MS.gene02922:CDS |
| TGTCTAAGGAGGTTGTTGAC+GGG | 0.496899 | 2.4:+62170437 | MS.gene02922:CDS |
| TGAGACTAAACACGTCATTC+CGG | 0.497303 | 2.4:+62171234 | MS.gene02922:CDS |
| TCTAGATCTTGCTTTCCTCA+TGG | 0.497710 | 2.4:-62170275 | None:intergenic |
| CGCTTGTAAACGCCTAATTG+AGG | 0.499806 | 2.4:-62170304 | None:intergenic |
| TTGCAAGGAATTTGAATCAT+CGG | 0.500581 | 2.4:+62172283 | MS.gene02922:CDS |
| TCATGAATCTTCCGATAAGC+AGG | 0.501312 | 2.4:-62170538 | None:intergenic |
| TGAACTTAAATGGAGCCAAA+TGG | 0.503893 | 2.4:+62171372 | MS.gene02922:CDS |
| AAAATGCTTGAGCTTGAAAA+GGG | 0.510249 | 2.4:+62170622 | MS.gene02922:CDS |
| TGCAAAGCATCGAAAGCATA+AGG | 0.512230 | 2.4:-62172125 | None:intergenic |
| CATTACCCCTTATGTTGGAA+TGG | 0.512394 | 2.4:+62170189 | MS.gene02922:CDS |
| AGGTCAGATAGAATTGTTTG+TGG | 0.513189 | 2.4:-62171172 | None:intergenic |
| CATAAAAGCATATATAGACT+TGG | 0.513319 | 2.4:-62171515 | None:intergenic |
| AATCATCGGGAATATTATGC+AGG | 0.520423 | 2.4:+62172297 | MS.gene02922:CDS |
| CTTTGTGCAAAATCGAAAGA+AGG | 0.525916 | 2.4:+62170690 | MS.gene02922:CDS |
| CAATGGCTTCAAAAGACGTA+TGG | 0.527901 | 2.4:+62170038 | None:intergenic |
| CATCTTTAAGTCCGGGGTCA+AGG | 0.529096 | 2.4:-62171192 | None:intergenic |
| GTTTGCCCCGGTTAAGAGGA+AGG | 0.530147 | 2.4:+62170351 | MS.gene02922:CDS |
| GCTTGTAAACGCCTAATTGA+GGG | 0.531080 | 2.4:-62170303 | None:intergenic |
| GGAATGACGTGTTTAGTCTC+AGG | 0.531762 | 2.4:-62171232 | None:intergenic |
| ATGGAGAGCGACATGTGTTA+TGG | 0.535219 | 2.4:+62172231 | MS.gene02922:CDS |
| GAGGGTGATGATTCTGATGA+AGG | 0.535697 | 2.4:+62170112 | MS.gene02922:CDS |
| TTCAGAATCATCAATTACAA+AGG | 0.545164 | 2.4:+62172490 | MS.gene02922:CDS |
| GTGTTTCTCCGGTTCATGAA+AGG | 0.545182 | 2.4:+62171142 | MS.gene02922:CDS |
| ACTTACTAGAATTCTTAATG+AGG | 0.548103 | 2.4:+62172550 | MS.gene02922:CDS |
| GCTACATCTGAGCTGTATAA+CGG | 0.548265 | 2.4:+62172176 | MS.gene02922:CDS |
| GATAGGAAATCAGTGAGGTG+TGG | 0.551495 | 2.4:+62170394 | MS.gene02922:CDS |
| ACCGATGGGGTCGAGACCGA+TGG | 0.554843 | 2.4:+62172590 | MS.gene02922:CDS |
| GAGATATGTCTAAGACCGAT+GGG | 0.555361 | 2.4:+62172576 | MS.gene02922:CDS |
| GAAGGTTATTCAGGAGAATG+AGG | 0.556385 | 2.4:+62170708 | MS.gene02922:CDS |
| AGAAGGTTGAAAATATAGCT+TGG | 0.556814 | 2.4:+62170842 | MS.gene02922:CDS |
| AGAGATATGTCTAAGACCGA+TGG | 0.562467 | 2.4:+62172575 | MS.gene02922:CDS |
| AAATAACCTCTCACATAGGA+TGG | 0.565070 | 2.4:-62171463 | None:intergenic |
| ATTCATGCTGCAAACTCCAT+CGG | 0.569005 | 2.4:-62172606 | None:intergenic |
| ATTCTATCTGACCTTGACCC+CGG | 0.577694 | 2.4:+62171181 | MS.gene02922:CDS |
| ACAAATACTCTGCTCTTGCA+AGG | 0.578215 | 2.4:+62172268 | MS.gene02922:CDS |
| TACCATGGATGAGAATGAGA+AGG | 0.581496 | 2.4:+62170825 | MS.gene02922:CDS |
| CTTTCTTGGAAAGGGATGTG+AGG | 0.596394 | 2.4:+62170665 | MS.gene02922:CDS |
| TGAGTCTCCTTATGTGATTG+AGG | 0.600028 | 2.4:-62172044 | None:intergenic |
| TACCAATTGAAGAGCATGCG+CGG | 0.607691 | 2.4:+62172090 | MS.gene02922:CDS |
| TAATGGCATCTTTAAGTCCG+GGG | 0.609613 | 2.4:-62171198 | None:intergenic |
| GATTTAAATTCGGCATAACG+AGG | 0.612578 | 2.4:-62171307 | None:intergenic |
| GTCTAAGGAGGTTGTTGACG+GGG | 0.619389 | 2.4:+62170438 | MS.gene02922:CDS |
| AAACACCATTCCAACATAAG+GGG | 0.620023 | 2.4:-62170194 | None:intergenic |
| CGGAAACAACAATGTCCTTG+TGG | 0.620981 | 2.4:+62170064 | MS.gene02922:CDS |
| AAGCTGGGTTTCCGGTACAC+CGG | 0.621789 | 2.4:+62170593 | MS.gene02922:CDS |
| GGTTAAGAGGAAGGCAAATG+GGG | 0.628905 | 2.4:+62170360 | MS.gene02922:CDS |
| TCGGCATAACGAGGCCCAAG+AGG | 0.630511 | 2.4:-62171298 | None:intergenic |
| TGGTTTGGTATCAATAGTTG+TGG | 0.630835 | 2.4:+62170964 | MS.gene02922:CDS |
| TCCATCGGTCTCGACCCCAT+CGG | 0.633244 | 2.4:-62172591 | None:intergenic |
| GTGGAATAAGGCATTGAATG+TGG | 0.639736 | 2.4:-62171329 | None:intergenic |
| TGGAGTTTGCAGCATGAATG+TGG | 0.649735 | 2.4:+62172610 | MS.gene02922:CDS |
| TAAAATGTATCTGTCTAAGG+AGG | 0.650992 | 2.4:+62170426 | MS.gene02922:CDS |
| TTGTTGACGGGGTTTCACAG+TGG | 0.656963 | 2.4:+62170449 | MS.gene02922:CDS |
| ATTTGCCTTCCTCTTAACCG+GGG | 0.662005 | 2.4:-62170356 | None:intergenic |
| TGGGCACCATCCTATGTGAG+AGG | 0.663195 | 2.4:+62171457 | MS.gene02922:CDS |
| TTGTTTAGAATATTCCACAC+CGG | 0.665129 | 2.4:-62171253 | None:intergenic |
| CCGAGAACGATCTTTAAACG+TGG | 0.667057 | 2.4:+62172391 | MS.gene02922:CDS |
| GGTGTGGAATATTCTAAACA+AGG | 0.670977 | 2.4:+62171255 | MS.gene02922:CDS |
| AATGCCCATGAAAATGATTG+TGG | 0.675484 | 2.4:-62171030 | None:intergenic |
| TGCTTATCGGAAGATTCATG+AGG | 0.681046 | 2.4:+62170540 | MS.gene02922:CDS |
| AGAACGATCTTTAAACGTGG+AGG | 0.689325 | 2.4:+62172394 | MS.gene02922:CDS |
| CTTGAAAAGGGAATTCAAGG+TGG | 0.689739 | 2.4:+62170634 | MS.gene02922:CDS |
| AAGTGTTACATTACAAACGA+GGG | 0.690032 | 2.4:+62170094 | MS.gene02922:CDS |
| TAACACTTCCAATCTCCACA+AGG | 0.707021 | 2.4:-62170079 | None:intergenic |
| ATTCCACATCGAGAAAACAG+AGG | 0.714783 | 2.4:+62171345 | MS.gene02922:CDS |
| GAAGTGTTACATTACAAACG+AGG | 0.716498 | 2.4:+62170093 | MS.gene02922:CDS |
| CTAAACACGTCATTCCGGTG+TGG | 0.723440 | 2.4:+62171239 | MS.gene02922:CDS |
| AGATATGTCTAAGACCGATG+GGG | 0.747503 | 2.4:+62172577 | MS.gene02922:CDS |
| ATAGAGATAGGAAATCAGTG+AGG | 0.812534 | 2.4:+62170389 | MS.gene02922:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATTCACAATTCATAAAAT+AGG | + | chr2.4:62171912-62171931 | MS.gene02922:intron | 15.0% |
| !! | ATAATTCATTAGAATGCATT+GGG | - | chr2.4:62171730-62171749 | None:intergenic | 20.0% |
| !! | ATTGAATGTGGATTTAAATT+CGG | - | chr2.4:62171320-62171339 | None:intergenic | 20.0% |
| !!! | GTCATTTTTATTGTATCTTA+CGG | + | chr2.4:62171875-62171894 | MS.gene02922:intron | 20.0% |
| !!! | TGAAAATAAATTTTCAGCTT+GGG | - | chr2.4:62172474-62172493 | None:intergenic | 20.0% |
| ! | AAAAGATTGACTATACAATG+TGG | - | chr2.4:62171797-62171816 | None:intergenic | 25.0% |
| ! | ACAAATACTACTTAAGTAGA+TGG | + | chr2.4:62172366-62172385 | MS.gene02922:CDS | 25.0% |
| ! | ACTTACTAGAATTCTTAATG+AGG | + | chr2.4:62172550-62172569 | MS.gene02922:CDS | 25.0% |
| ! | ATTTCTCAGCAATAAAACTT+TGG | - | chr2.4:62172433-62172452 | None:intergenic | 25.0% |
| ! | CAATATACAAATCTTAGAAC+TGG | + | chr2.4:62172065-62172084 | MS.gene02922:CDS | 25.0% |
| ! | CATAAGAGGAATATTTATGA+AGG | - | chr2.4:62171102-62171121 | None:intergenic | 25.0% |
| ! | CATAATTCATTAGAATGCAT+TGG | - | chr2.4:62171731-62171750 | None:intergenic | 25.0% |
| ! | TAAAACACAACCGAAAAAAA+TGG | - | chr2.4:62170995-62171014 | None:intergenic | 25.0% |
| ! | TCTACTTAAGTAGTATTTGT+CGG | - | chr2.4:62172366-62172385 | None:intergenic | 25.0% |
| ! | TTCAGAATCATCAATTACAA+AGG | + | chr2.4:62172490-62172509 | MS.gene02922:CDS | 25.0% |
| !! | CATAAAAGCATATATAGACT+TGG | - | chr2.4:62171518-62171537 | None:intergenic | 25.0% |
| !! | CTGAAAATAAATTTTCAGCT+TGG | - | chr2.4:62172475-62172494 | None:intergenic | 25.0% |
| !!! | AAAGTTTTATTGCTGAGAAA+TGG | + | chr2.4:62172432-62172451 | MS.gene02922:CDS | 25.0% |
| !!! | CTTTGTTTATGATTTTACCA+TGG | + | chr2.4:62170810-62170829 | MS.gene02922:CDS | 25.0% |
| !!! | TCTTTGTTTTGTATGGTTTT+CGG | + | chr2.4:62171626-62171645 | MS.gene02922:intron | 25.0% |
| AAAACAAAGAGCAAGCATAT+GGG | - | chr2.4:62171616-62171635 | None:intergenic | 30.0% | |
| AAAATGCTTGAGCTTGAAAA+GGG | + | chr2.4:62170622-62170641 | MS.gene02922:CDS | 30.0% | |
| AAATCGAAAGAAGGTTATTC+AGG | + | chr2.4:62170699-62170718 | MS.gene02922:CDS | 30.0% | |
| AAGTGTTACATTACAAACGA+GGG | + | chr2.4:62170094-62170113 | MS.gene02922:CDS | 30.0% | |
| ACATTTGTCTTTCTTGGAAA+GGG | + | chr2.4:62170657-62170676 | MS.gene02922:CDS | 30.0% | |
| AGAAGGTTGAAAATATAGCT+TGG | + | chr2.4:62170842-62170861 | MS.gene02922:CDS | 30.0% | |
| ATCAAGTTCCAAATCTGAAA+TGG | - | chr2.4:62171942-62171961 | None:intergenic | 30.0% | |
| CAAAAAATAACCTCTCACAT+AGG | - | chr2.4:62171470-62171489 | None:intergenic | 30.0% | |
| CAAGGAATAATCATCATAAG+AGG | - | chr2.4:62171116-62171135 | None:intergenic | 30.0% | |
| CAGAGGAATTTGAACTTAAA+TGG | + | chr2.4:62171362-62171381 | MS.gene02922:CDS | 30.0% | |
| CTACTTAAGTAGTATTTGTC+GGG | - | chr2.4:62172365-62172384 | None:intergenic | 30.0% | |
| GAAAATATAGCTTGGTCATA+TGG | + | chr2.4:62170850-62170869 | MS.gene02922:CDS | 30.0% | |
| GTTAATAAGAATGTCGTGTT+TGG | + | chr2.4:62170880-62170899 | MS.gene02922:CDS | 30.0% | |
| TAAAATGTATCTGTCTAAGG+AGG | + | chr2.4:62170426-62170445 | MS.gene02922:CDS | 30.0% | |
| TAAACACCATTCCAACATAA+GGG | - | chr2.4:62170198-62170217 | None:intergenic | 30.0% | |
| TAGGTATTCCATTTCAGATT+TGG | + | chr2.4:62171931-62171950 | MS.gene02922:intron | 30.0% | |
| TATGAATCACCACTTAAACT+TGG | + | chr2.4:62171747-62171766 | MS.gene02922:intron | 30.0% | |
| TGCTAAAATGTATCTGTCTA+AGG | + | chr2.4:62170423-62170442 | MS.gene02922:CDS | 30.0% | |
| TTAAACACCATTCCAACATA+AGG | - | chr2.4:62170199-62170218 | None:intergenic | 30.0% | |
| TTGCAAGGAATTTGAATCAT+CGG | + | chr2.4:62172283-62172302 | MS.gene02922:CDS | 30.0% | |
| ! | AAACACCACAATCATTTTCA+TGG | + | chr2.4:62171025-62171044 | MS.gene02922:CDS | 30.0% |
| ! | AACACCACAATCATTTTCAT+GGG | + | chr2.4:62171026-62171045 | MS.gene02922:CDS | 30.0% |
| ! | ATCACTTATGGATTCCTTTT+TGG | + | chr2.4:62170937-62170956 | MS.gene02922:CDS | 30.0% |
| ! | GAAAAGGGAAAATGATGTTT+TGG | + | chr2.4:62170744-62170763 | MS.gene02922:CDS | 30.0% |
| ! | TTCTAAACAAGGTATCTAGT+TGG | + | chr2.4:62171266-62171285 | MS.gene02922:CDS | 30.0% |
| ! | TTGTTTAGAATATTCCACAC+CGG | - | chr2.4:62171256-62171275 | None:intergenic | 30.0% |
| ! | TTTTCATCCTCAATCACATA+AGG | + | chr2.4:62172037-62172056 | MS.gene02922:CDS | 30.0% |
| !!! | ATTTTGTTTGTTATCGATCC+GGG | + | chr2.4:62170329-62170348 | MS.gene02922:CDS | 30.0% |
| !!! | CTATGTGAGAGGTTATTTTT+TGG | + | chr2.4:62171468-62171487 | MS.gene02922:CDS | 30.0% |
| !!! | GATTTTGTTTGTTATCGATC+CGG | + | chr2.4:62170328-62170347 | MS.gene02922:CDS | 30.0% |
| AAACACCATTCCAACATAAG+GGG | - | chr2.4:62170197-62170216 | None:intergenic | 35.0% | |
| AAATAACCTCTCACATAGGA+TGG | - | chr2.4:62171466-62171485 | None:intergenic | 35.0% | |
| AATCATCGGGAATATTATGC+AGG | + | chr2.4:62172297-62172316 | MS.gene02922:CDS | 35.0% | |
| AATGCCCATGAAAATGATTG+TGG | - | chr2.4:62171033-62171052 | None:intergenic | 35.0% | |
| AGAGAAATGTCATAAGAGCA+TGG | - | chr2.4:62171972-62171991 | None:intergenic | 35.0% | |
| AGGTCAGATAGAATTGTTTG+TGG | - | chr2.4:62171175-62171194 | None:intergenic | 35.0% | |
| ATAGAGATAGGAAATCAGTG+AGG | + | chr2.4:62170389-62170408 | MS.gene02922:CDS | 35.0% | |
| CAAAACAAAGAGCAAGCATA+TGG | - | chr2.4:62171617-62171636 | None:intergenic | 35.0% | |
| CTCAGGAAATTCACTTCTAA+TGG | - | chr2.4:62171218-62171237 | None:intergenic | 35.0% | |
| CTTCAAAAGACGTATGGATT+CGG | + | chr2.4:62170044-62170063 | MS.gene02922:CDS | 35.0% | |
| CTTTGTGCAAAATCGAAAGA+AGG | + | chr2.4:62170690-62170709 | MS.gene02922:CDS | 35.0% | |
| GAAAATGCTTGAGCTTGAAA+AGG | + | chr2.4:62170621-62170640 | MS.gene02922:CDS | 35.0% | |
| GACATTTGTCTTTCTTGGAA+AGG | + | chr2.4:62170656-62170675 | MS.gene02922:CDS | 35.0% | |
| GATATCATTACCCCTTATGT+TGG | + | chr2.4:62170184-62170203 | MS.gene02922:CDS | 35.0% | |
| GATTTAAATTCGGCATAACG+AGG | - | chr2.4:62171310-62171329 | None:intergenic | 35.0% | |
| GGCATTGCTTAATGAGAAAA+GGG | + | chr2.4:62170729-62170748 | MS.gene02922:CDS | 35.0% | |
| GGTGTGGAATATTCTAAACA+AGG | + | chr2.4:62171255-62171274 | MS.gene02922:CDS | 35.0% | |
| GTATTCAGTTCGAGCATATT+GGG | + | chr2.4:62171438-62171457 | MS.gene02922:CDS | 35.0% | |
| GTCCAAAATCAGAAACCATT+TGG | - | chr2.4:62171390-62171409 | None:intergenic | 35.0% | |
| GTTCTTTCATCAGTTCTTTG+CGG | - | chr2.4:62172532-62172551 | None:intergenic | 35.0% | |
| TACAACAGTATCCATGAGAA+GGG | - | chr2.4:62171999-62172018 | None:intergenic | 35.0% | |
| TCTAATGGCATCTTTAAGTC+CGG | - | chr2.4:62171203-62171222 | None:intergenic | 35.0% | |
| TCTTATCGATCGATCACTTA+TGG | + | chr2.4:62170925-62170944 | MS.gene02922:CDS | 35.0% | |
| TGAACTTAAATGGAGCCAAA+TGG | + | chr2.4:62171372-62171391 | MS.gene02922:CDS | 35.0% | |
| TGATGATTATTCCTTGATGC+AGG | + | chr2.4:62171120-62171139 | MS.gene02922:intron | 35.0% | |
| TGCAAGGAATTTGAATCATC+GGG | + | chr2.4:62172284-62172303 | MS.gene02922:CDS | 35.0% | |
| TGTACGACACTTCAAAAAGT+TGG | + | chr2.4:62172208-62172227 | MS.gene02922:CDS | 35.0% | |
| TGTATTCAGTTCGAGCATAT+TGG | + | chr2.4:62171437-62171456 | MS.gene02922:CDS | 35.0% | |
| TTCTTTCATCAGTTCTTTGC+GGG | - | chr2.4:62172531-62172550 | None:intergenic | 35.0% | |
| ! | AGCCAAATGGTTTCTGATTT+TGG | + | chr2.4:62171385-62171404 | MS.gene02922:CDS | 35.0% |
| ! | AGGCATTGCTTAATGAGAAA+AGG | + | chr2.4:62170728-62170747 | MS.gene02922:CDS | 35.0% |
| ! | ATCATTTTCATGGGCATTAC+AGG | + | chr2.4:62171035-62171054 | MS.gene02922:CDS | 35.0% |
| ! | ATGGTTTCTGATTTTGGACT+TGG | + | chr2.4:62171391-62171410 | MS.gene02922:CDS | 35.0% |
| ! | GAAGTGTTACATTACAAACG+AGG | + | chr2.4:62170093-62170112 | MS.gene02922:CDS | 35.0% |
| ! | GATGAAGCTTTTGAGCATTA+TGG | + | chr2.4:62170226-62170245 | MS.gene02922:CDS | 35.0% |
| ! | TCTAGAATTAGCCCTCAATT+AGG | + | chr2.4:62170292-62170311 | MS.gene02922:CDS | 35.0% |
| ! | TGTTTTCTCGATGTGGAATA+AGG | - | chr2.4:62171344-62171363 | None:intergenic | 35.0% |
| !! | CAGAGTATTTGTTCCTTTTC+TGG | - | chr2.4:62172260-62172279 | None:intergenic | 35.0% |
| !! | TGGTTTGGTATCAATAGTTG+TGG | + | chr2.4:62170964-62170983 | MS.gene02922:CDS | 35.0% |
| !! | TTTCGGTTGTGTTTTATTGC+AGG | + | chr2.4:62170999-62171018 | MS.gene02922:CDS | 35.0% |
| !!! | GCTTTTTTGAACAGGTATGT+TGG | + | chr2.4:62171572-62171591 | MS.gene02922:intron | 35.0% |
| !!! | TGCTTGCTCTTTGTTTTGTA+TGG | + | chr2.4:62171619-62171638 | MS.gene02922:intron | 35.0% |
| !!! | TGTGGCAGAACCATTTTTTT+CGG | + | chr2.4:62170982-62171001 | MS.gene02922:CDS | 35.0% |
| !!! | TTTGCGTAGCTTTTTTGAAC+AGG | + | chr2.4:62171564-62171583 | MS.gene02922:CDS | 35.0% |
| AACAATGTCCTTGTGGAGAT+TGG | + | chr2.4:62170071-62170090 | MS.gene02922:CDS | 40.0% | |
| AACCTTCTCATTCTCATCCA+TGG | - | chr2.4:62170830-62170849 | None:intergenic | 40.0% | |
| ACAAATACTCTGCTCTTGCA+AGG | + | chr2.4:62172268-62172287 | MS.gene02922:CDS | 40.0% | |
| AGAACGATCTTTAAACGTGG+AGG | + | chr2.4:62172394-62172413 | MS.gene02922:CDS | 40.0% | |
| AGGTGGACATTTGTCTTTCT+TGG | + | chr2.4:62170651-62170670 | MS.gene02922:CDS | 40.0% | |
| ATACTCTTGCTTTCGAAAGC+TGG | + | chr2.4:62170577-62170596 | MS.gene02922:CDS | 40.0% | |
| ATTCATGCTGCAAACTCCAT+CGG | - | chr2.4:62172609-62172628 | None:intergenic | 40.0% | |
| ATTCCACATCGAGAAAACAG+AGG | + | chr2.4:62171345-62171364 | MS.gene02922:CDS | 40.0% | |
| CAATGTGGACAACACAAAAG+TGG | - | chr2.4:62171782-62171801 | None:intergenic | 40.0% | |
| CATTACCCCTTATGTTGGAA+TGG | + | chr2.4:62170189-62170208 | MS.gene02922:CDS | 40.0% | |
| CCACGTTTAAAGATCGTTCT+CGG | - | chr2.4:62172394-62172413 | None:intergenic | 40.0% | |
| CGACACTTCAAAAAGTTGGA+TGG | + | chr2.4:62172212-62172231 | MS.gene02922:CDS | 40.0% | |
| CTAATGGCATCTTTAAGTCC+GGG | - | chr2.4:62171202-62171221 | None:intergenic | 40.0% | |
| CTACAACAGTATCCATGAGA+AGG | - | chr2.4:62172000-62172019 | None:intergenic | 40.0% | |
| CTTCTCATGGATACTGTTGT+AGG | + | chr2.4:62171998-62172017 | MS.gene02922:intron | 40.0% | |
| CTTGAAAAGGGAATTCAAGG+TGG | + | chr2.4:62170634-62170653 | MS.gene02922:CDS | 40.0% | |
| GAAGGTTATTCAGGAGAATG+AGG | + | chr2.4:62170708-62170727 | MS.gene02922:CDS | 40.0% | |
| GACATCTTCCTTTCATGAAC+CGG | - | chr2.4:62171153-62171172 | None:intergenic | 40.0% | |
| GAGCTTGAAAAGGGAATTCA+AGG | + | chr2.4:62170631-62170650 | MS.gene02922:CDS | 40.0% | |
| GCTACATCTGAGCTGTATAA+CGG | + | chr2.4:62172176-62172195 | MS.gene02922:CDS | 40.0% | |
| GCTTGTAAACGCCTAATTGA+GGG | - | chr2.4:62170306-62170325 | None:intergenic | 40.0% | |
| TAACACTTCCAATCTCCACA+AGG | - | chr2.4:62170082-62170101 | None:intergenic | 40.0% | |
| TAATGGCATCTTTAAGTCCG+GGG | - | chr2.4:62171201-62171220 | None:intergenic | 40.0% | |
| TACCAAACCACACTCCAAAA+AGG | - | chr2.4:62170954-62170973 | None:intergenic | 40.0% | |
| TACCATGGATGAGAATGAGA+AGG | + | chr2.4:62170825-62170844 | MS.gene02922:CDS | 40.0% | |
| TACTCTTGCTTTCGAAAGCT+GGG | + | chr2.4:62170578-62170597 | MS.gene02922:CDS | 40.0% | |
| TCATGAATCTTCCGATAAGC+AGG | - | chr2.4:62170541-62170560 | None:intergenic | 40.0% | |
| TCATGGATACTGTTGTAGGT+TGG | + | chr2.4:62172002-62172021 | MS.gene02922:intron | 40.0% | |
| TCTAGATCTTGCTTTCCTCA+TGG | - | chr2.4:62170278-62170297 | None:intergenic | 40.0% | |
| TGAGACTAAACACGTCATTC+CGG | + | chr2.4:62171234-62171253 | MS.gene02922:CDS | 40.0% | |
| TGAGTCTCCTTATGTGATTG+AGG | - | chr2.4:62172047-62172066 | None:intergenic | 40.0% | |
| TGCTTATCGGAAGATTCATG+AGG | + | chr2.4:62170540-62170559 | MS.gene02922:CDS | 40.0% | |
| TGTGTTATGGCTACCAGAAA+AGG | + | chr2.4:62172244-62172263 | MS.gene02922:CDS | 40.0% | |
| TTTCTCTTTCTCCCTTCTCA+TGG | + | chr2.4:62171985-62172004 | MS.gene02922:intron | 40.0% | |
| ! | AGAGATATGTCTAAGACCGA+TGG | + | chr2.4:62172575-62172594 | MS.gene02922:CDS | 40.0% |
| ! | AGATATGTCTAAGACCGATG+GGG | + | chr2.4:62172577-62172596 | MS.gene02922:CDS | 40.0% |
| ! | ATTCCTCTGTTTTCTCGATG+TGG | - | chr2.4:62171351-62171370 | None:intergenic | 40.0% |
| ! | ATTTTCACTATCCGGTGTAC+CGG | - | chr2.4:62170607-62170626 | None:intergenic | 40.0% |
| ! | GAGATATGTCTAAGACCGAT+GGG | + | chr2.4:62172576-62172595 | MS.gene02922:CDS | 40.0% |
| ! | GCTCAAGCATTTTCACTATC+CGG | - | chr2.4:62170615-62170634 | None:intergenic | 40.0% |
| ! | GGCAATTTTGCTAGAAAGCA+TGG | + | chr2.4:62170247-62170266 | MS.gene02922:CDS | 40.0% |
| ! | TGCGTCTTTTACCTGCTTAT+CGG | + | chr2.4:62170527-62170546 | MS.gene02922:CDS | 40.0% |
| !! | GAAAGCATGGATTTTCCATG+AGG | + | chr2.4:62170260-62170279 | MS.gene02922:CDS | 40.0% |
| !! | GTGGAATAAGGCATTGAATG+TGG | - | chr2.4:62171332-62171351 | None:intergenic | 40.0% |
| !! | TGCAAAGCATCGAAAGCATA+AGG | - | chr2.4:62172128-62172147 | None:intergenic | 40.0% |
| !! | TTATCTGCTTTCACCGATTC+TGG | - | chr2.4:62170148-62170167 | None:intergenic | 40.0% |
| !!! | AGTTGGTTTTGTCTTCCTCT+TGG | + | chr2.4:62171283-62171302 | MS.gene02922:CDS | 40.0% |
| !!! | ATGGATTCCTTTTTGGAGTG+TGG | + | chr2.4:62170944-62170963 | MS.gene02922:CDS | 40.0% |
| !!! | GTTGGTTTTGTCTTCCTCTT+GGG | + | chr2.4:62171284-62171303 | MS.gene02922:CDS | 40.0% |
| !!! | TTCCTTTTTGGAGTGTGGTT+TGG | + | chr2.4:62170949-62170968 | MS.gene02922:CDS | 40.0% |
| ATGGAGAGCGACATGTGTTA+TGG | + | chr2.4:62172231-62172250 | MS.gene02922:CDS | 45.0% | |
| ATTCTATCTGACCTTGACCC+CGG | + | chr2.4:62171181-62171200 | MS.gene02922:CDS | 45.0% | |
| ATTTGCCTTCCTCTTAACCG+GGG | - | chr2.4:62170359-62170378 | None:intergenic | 45.0% | |
| CATTTGCCTTCCTCTTAACC+GGG | - | chr2.4:62170360-62170379 | None:intergenic | 45.0% | |
| CCATTTGCCTTCCTCTTAAC+CGG | - | chr2.4:62170361-62170380 | None:intergenic | 45.0% | |
| CCGAGAACGATCTTTAAACG+TGG | + | chr2.4:62172391-62172410 | MS.gene02922:CDS | 45.0% | |
| CGCTTGTAAACGCCTAATTG+AGG | - | chr2.4:62170307-62170326 | None:intergenic | 45.0% | |
| CGGAAACAACAATGTCCTTG+TGG | + | chr2.4:62170064-62170083 | MS.gene02922:CDS | 45.0% | |
| CGGTTAAGAGGAAGGCAAAT+GGG | + | chr2.4:62170359-62170378 | MS.gene02922:CDS | 45.0% | |
| CTGTCTAAGGAGGTTGTTGA+CGG | + | chr2.4:62170436-62170455 | MS.gene02922:CDS | 45.0% | |
| CTTTCTTGGAAAGGGATGTG+AGG | + | chr2.4:62170665-62170684 | MS.gene02922:CDS | 45.0% | |
| GAGGGTGATGATTCTGATGA+AGG | + | chr2.4:62170112-62170131 | MS.gene02922:CDS | 45.0% | |
| GATAGGAAATCAGTGAGGTG+TGG | + | chr2.4:62170394-62170413 | MS.gene02922:CDS | 45.0% | |
| GGAATGACGTGTTTAGTCTC+AGG | - | chr2.4:62171235-62171254 | None:intergenic | 45.0% | |
| GGTTAAGAGGAAGGCAAATG+GGG | + | chr2.4:62170360-62170379 | MS.gene02922:CDS | 45.0% | |
| GTCATCATCTGCTTCTTTCG+CGG | - | chr2.4:62170791-62170810 | None:intergenic | 45.0% | |
| GTGGACAACACAAAAGTGGT+TGG | - | chr2.4:62171778-62171797 | None:intergenic | 45.0% | |
| GTGTTTCTCCGGTTCATGAA+AGG | + | chr2.4:62171142-62171161 | MS.gene02922:CDS | 45.0% | |
| TGGAGTTTGCAGCATGAATG+TGG | + | chr2.4:62172610-62172629 | MS.gene02922:CDS | 45.0% | |
| TGTCTAAGGAGGTTGTTGAC+GGG | + | chr2.4:62170437-62170456 | MS.gene02922:CDS | 45.0% | |
| TTGGCGTCACCAAGTTTAAG+TGG | - | chr2.4:62171759-62171778 | None:intergenic | 45.0% | |
| ! | CGTGCATAATCACGAGCTTT+TGG | + | chr2.4:62170492-62170511 | MS.gene02922:CDS | 45.0% |
| ! | TACCAATTGAAGAGCATGCG+CGG | + | chr2.4:62172090-62172109 | MS.gene02922:CDS | 45.0% |
| !! | ATGGGGAGCATCATAGAGAT+AGG | + | chr2.4:62170377-62170396 | MS.gene02922:CDS | 45.0% |
| AGGTTCTGCAGCACCAGAAT+CGG | + | chr2.4:62170132-62170151 | MS.gene02922:CDS | 50.0% | |
| CATCTTTAAGTCCGGGGTCA+AGG | - | chr2.4:62171195-62171214 | None:intergenic | 50.0% | |
| CCGGTTAAGAGGAAGGCAAA+TGG | + | chr2.4:62170358-62170377 | MS.gene02922:CDS | 50.0% | |
| CCTTGATGCAGGTGTTTCTC+CGG | + | chr2.4:62171131-62171150 | MS.gene02922:intron | 50.0% | |
| CGATGCTTTGCAGCAAGAGT+TGG | + | chr2.4:62172136-62172155 | MS.gene02922:CDS | 50.0% | |
| CTAAACACGTCATTCCGGTG+TGG | + | chr2.4:62171239-62171258 | MS.gene02922:CDS | 50.0% | |
| GCTTTCGAAAGCTGGGTTTC+CGG | + | chr2.4:62170585-62170604 | MS.gene02922:CDS | 50.0% | |
| GTCTAAGGAGGTTGTTGACG+GGG | + | chr2.4:62170438-62170457 | MS.gene02922:CDS | 50.0% | |
| TTGTTGACGGGGTTTCACAG+TGG | + | chr2.4:62170449-62170468 | MS.gene02922:CDS | 50.0% | |
| AAGCTGGGTTTCCGGTACAC+CGG | + | chr2.4:62170593-62170612 | MS.gene02922:CDS | 55.0% | |
| CCGGAGAAACACCTGCATCA+AGG | - | chr2.4:62171134-62171153 | None:intergenic | 55.0% | |
| CTCCGCGCATGCTCTTCAAT+TGG | - | chr2.4:62172095-62172114 | None:intergenic | 55.0% | |
| GTTTGCCCCGGTTAAGAGGA+AGG | + | chr2.4:62170351-62170370 | MS.gene02922:CDS | 55.0% | |
| TGGGCACCATCCTATGTGAG+AGG | + | chr2.4:62171457-62171476 | MS.gene02922:CDS | 55.0% | |
| TTATCGATCCGGGTTTGCCC+CGG | + | chr2.4:62170339-62170358 | MS.gene02922:CDS | 55.0% | |
| CCTCTTAACCGGGGCAAACC+CGG | - | chr2.4:62170350-62170369 | None:intergenic | 60.0% | |
| TCCATCGGTCTCGACCCCAT+CGG | - | chr2.4:62172594-62172613 | None:intergenic | 60.0% | |
| TCGGCATAACGAGGCCCAAG+AGG | - | chr2.4:62171301-62171320 | None:intergenic | 60.0% | |
| ACCGATGGGGTCGAGACCGA+TGG | + | chr2.4:62172590-62172609 | MS.gene02922:CDS | 65.0% | |
| CCGGGTTTGCCCCGGTTAAG+AGG | + | chr2.4:62170347-62170366 | MS.gene02922:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 62170040 | 62172652 | 62170040 | ID=MS.gene02922 |
| chr2.4 | mRNA | 62170040 | 62172652 | 62170040 | ID=MS.gene02922.t1;Parent=MS.gene02922 |
| chr2.4 | exon | 62170040 | 62171056 | 62170040 | ID=MS.gene02922.t1.exon1;Parent=MS.gene02922.t1 |
| chr2.4 | CDS | 62170040 | 62171056 | 62170040 | ID=cds.MS.gene02922.t1;Parent=MS.gene02922.t1 |
| chr2.4 | exon | 62171142 | 62171585 | 62171142 | ID=MS.gene02922.t1.exon2;Parent=MS.gene02922.t1 |
| chr2.4 | CDS | 62171142 | 62171585 | 62171142 | ID=cds.MS.gene02922.t1;Parent=MS.gene02922.t1 |
| chr2.4 | exon | 62172020 | 62172652 | 62172020 | ID=MS.gene02922.t1.exon3;Parent=MS.gene02922.t1 |
| chr2.4 | CDS | 62172020 | 62172652 | 62172020 | ID=cds.MS.gene02922.t1;Parent=MS.gene02922.t1 |
| Gene Sequence |
| Protein sequence |