Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029403.t1 | XP_013470179.1 | 95.2 | 231 | 11 | 0 | 1 | 231 | 1 | 231 | 2.10E-122 | 448.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029403.t1 | Q9CA30 | 55.1 | 147 | 54 | 3 | 1 | 145 | 1 | 137 | 2.6e-41 | 170.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029403.t1 | G7ZZB8 | 95.2 | 231 | 11 | 0 | 1 | 231 | 1 | 231 | 1.5e-122 | 448.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene029403.t1 | TF | LOB |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029403.t1 | MTR_1g110840 | 95.238 | 231 | 11 | 0 | 1 | 231 | 1 | 231 | 1.48e-166 | 459 |
| MS.gene029403.t1 | MTR_6g453130 | 93.506 | 231 | 15 | 0 | 1 | 231 | 1 | 231 | 9.08e-164 | 451 |
| MS.gene029403.t1 | MTR_6g054080 | 90.043 | 231 | 23 | 0 | 1 | 231 | 1 | 231 | 8.37e-158 | 436 |
| MS.gene029403.t1 | MTR_6g054150 | 88.312 | 231 | 27 | 0 | 1 | 231 | 1 | 231 | 1.58e-155 | 431 |
| MS.gene029403.t1 | MTR_6g018270 | 55.172 | 174 | 57 | 7 | 1 | 168 | 1 | 159 | 6.81e-62 | 195 |
| MS.gene029403.t1 | MTR_7g007010 | 44.053 | 227 | 109 | 7 | 1 | 223 | 1 | 213 | 1.50e-55 | 179 |
| MS.gene029403.t1 | MTR_4g095600 | 56.303 | 119 | 48 | 2 | 3 | 119 | 1 | 117 | 2.19e-46 | 154 |
| MS.gene029403.t1 | MTR_5g015880 | 44.970 | 169 | 82 | 5 | 3 | 165 | 1 | 164 | 7.16e-45 | 150 |
| MS.gene029403.t1 | MTR_1g106420 | 44.882 | 127 | 63 | 2 | 3 | 124 | 1 | 125 | 9.37e-36 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029403.t1 | AT1G68510 | 55.102 | 147 | 54 | 3 | 1 | 145 | 1 | 137 | 2.81e-53 | 171 |
| MS.gene029403.t1 | AT3G02550 | 40.529 | 227 | 122 | 5 | 1 | 225 | 1 | 216 | 3.82e-53 | 172 |
| MS.gene029403.t1 | AT1G67100 | 54.861 | 144 | 57 | 3 | 1 | 144 | 1 | 136 | 5.82e-50 | 163 |
| MS.gene029403.t1 | AT3G49940 | 53.659 | 123 | 55 | 1 | 3 | 125 | 1 | 121 | 1.54e-45 | 152 |
| MS.gene029403.t1 | AT5G67420 | 55.963 | 109 | 46 | 1 | 3 | 111 | 1 | 107 | 1.06e-43 | 147 |
| MS.gene029403.t1 | AT5G67420 | 55.963 | 109 | 46 | 1 | 3 | 111 | 1 | 107 | 1.06e-43 | 147 |
| MS.gene029403.t1 | AT4G37540 | 57.798 | 109 | 44 | 1 | 3 | 111 | 1 | 107 | 1.42e-43 | 147 |
Find 62 sgRNAs with CRISPR-Local
Find 88 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGCATGCCCTTGGGATTC+AGG | 0.157225 | 1.4:-84516097 | None:intergenic |
| ATGGGGCGCTTGGCTTATTT+TGG | 0.165756 | 1.4:+84516565 | MS.gene029403:CDS |
| AAGAATACCAACATGGAAAT+TGG | 0.166066 | 1.4:+84516864 | MS.gene029403:CDS |
| ACCGGTTCGGCCATAAAATT+TGG | 0.172606 | 1.4:-84516131 | None:intergenic |
| ATGGCGTATATCATAGGTTT+TGG | 0.254539 | 1.4:-84516718 | None:intergenic |
| TGCTGAGAATCAAGTGAATT+TGG | 0.279066 | 1.4:+84516929 | MS.gene029403:CDS |
| CCATGTTGGTATTCTTCAAA+AGG | 0.367139 | 1.4:-84516857 | None:intergenic |
| AGAATACCAACATGGAAATT+GGG | 0.374565 | 1.4:+84516865 | MS.gene029403:CDS |
| TGCCACATGGCGTATATCAT+AGG | 0.386203 | 1.4:-84516724 | None:intergenic |
| CTTTGATTGCCAATCAACTA+AGG | 0.392207 | 1.4:+84516965 | MS.gene029403:CDS |
| CATAAAATTTGGCAAGGAAG+AGG | 0.404166 | 1.4:-84516120 | None:intergenic |
| GACTGAACCAACTCGTGGCT+TGG | 0.415502 | 1.4:-84516811 | None:intergenic |
| ACTGAACCAACTCGTGGCTT+GGG | 0.424285 | 1.4:-84516810 | None:intergenic |
| GTGAATTTGGAACTCACTCT+TGG | 0.424885 | 1.4:+84516942 | MS.gene029403:CDS |
| GGAAGAGGGTGGCATGCCCT+TGG | 0.443110 | 1.4:-84516105 | None:intergenic |
| GCAACTGATCCACTCAAGGC+AGG | 0.443950 | 1.4:-84516074 | None:intergenic |
| TGGCATGCCCTTGGGATTCA+GGG | 0.444879 | 1.4:-84516096 | None:intergenic |
| AAAACTCAATTCAAAAGAGC+TGG | 0.446487 | 1.4:+84516774 | MS.gene029403:CDS |
| ATTGATGGGCAGACATCATC+AGG | 0.455052 | 1.4:+84516666 | MS.gene029403:CDS |
| GCAGTTGAAGCTGTGCTGAC+TGG | 0.456964 | 1.4:+84516615 | MS.gene029403:CDS |
| AGATTGGTGAATCCCACATA+TGG | 0.458590 | 1.4:+84516546 | MS.gene029403:CDS |
| TAAGCCAAGCGCCCCATATG+TGG | 0.471835 | 1.4:-84516559 | None:intergenic |
| CATGTTGGTATTCTTCAAAA+GGG | 0.477135 | 1.4:-84516856 | None:intergenic |
| GAAGAGGGTGGCATGCCCTT+GGG | 0.479104 | 1.4:-84516104 | None:intergenic |
| AATCATCACTGCAACCTTTG+CGG | 0.482809 | 1.4:-84516039 | None:intergenic |
| GGAGATTGAGCAAACCGGTT+CGG | 0.494518 | 1.4:-84516144 | None:intergenic |
| GATTGGTGAATCCCACATAT+GGG | 0.508471 | 1.4:+84516547 | MS.gene029403:CDS |
| GATATACGCCATGTGGCAAA+AGG | 0.516720 | 1.4:+84516729 | MS.gene029403:CDS |
| AATCCCACATATGGGGCGCT+TGG | 0.518707 | 1.4:+84516555 | MS.gene029403:CDS |
| GGTGAGGAGATTGAGCAAAC+CGG | 0.524508 | 1.4:-84516149 | None:intergenic |
| TCATCAAGCCCTGCCTTGAG+TGG | 0.538225 | 1.4:+84516065 | MS.gene029403:CDS |
| GTACCAATGTGGACATCAAA+GGG | 0.546635 | 1.4:+84516751 | MS.gene029403:CDS |
| TTTCCCTTTGATGTCCACAT+TGG | 0.551024 | 1.4:-84516754 | None:intergenic |
| GGTACCAATGTGGACATCAA+AGG | 0.551224 | 1.4:+84516750 | MS.gene029403:CDS |
| GTACGAGGCAGCTGGTAGAT+TGG | 0.560594 | 1.4:+84516530 | MS.gene029403:CDS |
| GAATACCAACATGGAAATTG+GGG | 0.561319 | 1.4:+84516866 | MS.gene029403:CDS |
| CTGAAGCCCAAGCCACGAGT+TGG | 0.576033 | 1.4:+84516804 | MS.gene029403:CDS |
| AGTCTCCCCAATTTCCATGT+TGG | 0.576332 | 1.4:-84516871 | None:intergenic |
| ATAAAATTTGGCAAGGAAGA+GGG | 0.578936 | 1.4:-84516119 | None:intergenic |
| TTCGGCCATAAAATTTGGCA+AGG | 0.579687 | 1.4:-84516126 | None:intergenic |
| TAATGAAGTTGAGTTGCAAT+GGG | 0.583194 | 1.4:+84516005 | None:intergenic |
| TTTGATTGCCAATCAACTAA+GGG | 0.586746 | 1.4:+84516966 | MS.gene029403:CDS |
| AAGCCAAGCGCCCCATATGT+GGG | 0.589682 | 1.4:-84516558 | None:intergenic |
| AAACTCAATTCAAAAGAGCT+GGG | 0.590181 | 1.4:+84516775 | MS.gene029403:CDS |
| CAACTGATCCACTCAAGGCA+GGG | 0.595554 | 1.4:-84516073 | None:intergenic |
| ATCAGTTGCCCTGAATCCCA+AGG | 0.599742 | 1.4:+84516088 | MS.gene029403:CDS |
| ATAATGAAGTTGAGTTGCAA+TGG | 0.608858 | 1.4:+84516004 | None:intergenic |
| TCATTGTTGTACGAGGCAGC+TGG | 0.614180 | 1.4:+84516522 | MS.gene029403:CDS |
| ACGAGTTGGTTCAGTCGACT+CGG | 0.622355 | 1.4:+84516818 | MS.gene029403:CDS |
| CAGGGCAACTGATCCACTCA+AGG | 0.625744 | 1.4:-84516078 | None:intergenic |
| GGGTGTCGTGTGCTCCGCAA+AGG | 0.627575 | 1.4:+84516025 | MS.gene029403:CDS |
| ATTGGTGAATCCCACATATG+GGG | 0.640018 | 1.4:+84516548 | MS.gene029403:CDS |
| TTTGATTGGTAGCATTGGTG+AGG | 0.643249 | 1.4:-84516165 | None:intergenic |
| AAATTGGGGAGACTTCATCA+AGG | 0.644743 | 1.4:+84516880 | MS.gene029403:CDS |
| AATTGGGGAGACTTCATCAA+GGG | 0.644822 | 1.4:+84516881 | MS.gene029403:CDS |
| AATCAAAATCATAATCCACC+AGG | 0.664735 | 1.4:+84516181 | MS.gene029403:CDS |
| TCAGTTGCCCTGAATCCCAA+GGG | 0.669183 | 1.4:+84516089 | MS.gene029403:CDS |
| GAGTCGACTGAACCAACTCG+TGG | 0.679210 | 1.4:-84516816 | None:intergenic |
| AACCTATGATATACGCCATG+TGG | 0.679816 | 1.4:+84516722 | MS.gene029403:CDS |
| AAATTTGGCAAGGAAGAGGG+TGG | 0.680062 | 1.4:-84516116 | None:intergenic |
| GTTTAAATCATTGTTGTACG+AGG | 0.684324 | 1.4:+84516515 | MS.gene029403:CDS |
| TGTGGCAAAAGGTACCAATG+TGG | 0.731996 | 1.4:+84516740 | MS.gene029403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATCTAACACTTAAATGA+TGG | + | chr1.4:84516225-84516244 | MS.gene029403:intron | 20.0% |
| !!! | GAATCTATGAAAAGATTTTA+TGG | - | chr1.4:84516423-84516442 | None:intergenic | 20.0% |
| !!! | GTTTAATTTATGATCCATAA+CGG | - | chr1.4:84516382-84516401 | None:intergenic | 20.0% |
| !! | ACAGTTTTACAATGATTGAT+GGG | + | chr1.4:84516652-84516671 | MS.gene029403:CDS | 25.0% |
| AAAACTCAATTCAAAAGAGC+TGG | + | chr1.4:84516774-84516793 | MS.gene029403:CDS | 30.0% | |
| AAACTCAATTCAAAAGAGCT+GGG | + | chr1.4:84516775-84516794 | MS.gene029403:CDS | 30.0% | |
| AAGAATACCAACATGGAAAT+TGG | + | chr1.4:84516864-84516883 | MS.gene029403:CDS | 30.0% | |
| AATCAAAATCATAATCCACC+AGG | + | chr1.4:84516181-84516200 | MS.gene029403:CDS | 30.0% | |
| AGAATACCAACATGGAAATT+GGG | + | chr1.4:84516865-84516884 | MS.gene029403:CDS | 30.0% | |
| ATAAAATTTGGCAAGGAAGA+GGG | - | chr1.4:84516122-84516141 | None:intergenic | 30.0% | |
| ATGGAACATAAATGAGACAT+AGG | - | chr1.4:84516404-84516423 | None:intergenic | 30.0% | |
| CATGTTGGTATTCTTCAAAA+GGG | - | chr1.4:84516859-84516878 | None:intergenic | 30.0% | |
| GTTTAAATCATTGTTGTACG+AGG | + | chr1.4:84516515-84516534 | MS.gene029403:CDS | 30.0% | |
| TAAAAAAGTTTGTCGTGTAG+CGG | - | chr1.4:84516314-84516333 | None:intergenic | 30.0% | |
| TTTGATTGCCAATCAACTAA+GGG | + | chr1.4:84516966-84516985 | MS.gene029403:CDS | 30.0% | |
| ! | ACCACAATTTAAAACCATGA+TGG | - | chr1.4:84516277-84516296 | None:intergenic | 30.0% |
| ! | CAATTTAAAACCATGATGGA+TGG | - | chr1.4:84516273-84516292 | None:intergenic | 30.0% |
| ! | GACAGTTTTACAATGATTGA+TGG | + | chr1.4:84516651-84516670 | MS.gene029403:CDS | 30.0% |
| ! | TCTAACACTTAAATGATGGA+TGG | + | chr1.4:84516229-84516248 | MS.gene029403:intron | 30.0% |
| !!! | ATGATTTTGATTGGTAGCAT+TGG | - | chr1.4:84516173-84516192 | None:intergenic | 30.0% |
| !!! | TCCATCATGGTTTTAAATTG+TGG | + | chr1.4:84516273-84516292 | MS.gene029403:intron | 30.0% |
| !!! | TGGTGGATTATGATTTTGAT+TGG | - | chr1.4:84516182-84516201 | None:intergenic | 30.0% |
| ATCAATGATTCCATCCATCA+TGG | + | chr1.4:84516260-84516279 | MS.gene029403:intron | 35.0% | |
| CATAAAATTTGGCAAGGAAG+AGG | - | chr1.4:84516123-84516142 | None:intergenic | 35.0% | |
| CCATGTTGGTATTCTTCAAA+AGG | - | chr1.4:84516860-84516879 | None:intergenic | 35.0% | |
| CTTTGATTGCCAATCAACTA+AGG | + | chr1.4:84516965-84516984 | MS.gene029403:CDS | 35.0% | |
| GAATACCAACATGGAAATTG+GGG | + | chr1.4:84516866-84516885 | MS.gene029403:CDS | 35.0% | |
| TATGATCCATAACGGTATTG+CGG | - | chr1.4:84516374-84516393 | None:intergenic | 35.0% | |
| TGCTGAGAATCAAGTGAATT+TGG | + | chr1.4:84516929-84516948 | MS.gene029403:CDS | 35.0% | |
| ! | ATGGCGTATATCATAGGTTT+TGG | - | chr1.4:84516721-84516740 | None:intergenic | 35.0% |
| ! | CTCTTCCTTGCCAAATTTTA+TGG | + | chr1.4:84516121-84516140 | MS.gene029403:CDS | 35.0% |
| ! | TGGCGTATATCATAGGTTTT+GGG | - | chr1.4:84516720-84516739 | None:intergenic | 35.0% |
| ! | TTTTCTTGCCCTTAGTTGAT+TGG | - | chr1.4:84516977-84516996 | None:intergenic | 35.0% |
| !! | CCTTTTGAAGAATACCAACA+TGG | + | chr1.4:84516857-84516876 | MS.gene029403:CDS | 35.0% |
| AAATTGGGGAGACTTCATCA+AGG | + | chr1.4:84516880-84516899 | MS.gene029403:CDS | 40.0% | |
| AACCTATGATATACGCCATG+TGG | + | chr1.4:84516722-84516741 | MS.gene029403:CDS | 40.0% | |
| AATCATCACTGCAACCTTTG+CGG | - | chr1.4:84516042-84516061 | None:intergenic | 40.0% | |
| AATTGGGGAGACTTCATCAA+GGG | + | chr1.4:84516881-84516900 | MS.gene029403:CDS | 40.0% | |
| AGATTGGTGAATCCCACATA+TGG | + | chr1.4:84516546-84516565 | MS.gene029403:CDS | 40.0% | |
| ATTGGTGAATCCCACATATG+GGG | + | chr1.4:84516548-84516567 | MS.gene029403:CDS | 40.0% | |
| GATTGGTGAATCCCACATAT+GGG | + | chr1.4:84516547-84516566 | MS.gene029403:CDS | 40.0% | |
| GTACCAATGTGGACATCAAA+GGG | + | chr1.4:84516751-84516770 | MS.gene029403:CDS | 40.0% | |
| TTCGGCCATAAAATTTGGCA+AGG | - | chr1.4:84516129-84516148 | None:intergenic | 40.0% | |
| TTTCCCTTTGATGTCCACAT+TGG | - | chr1.4:84516757-84516776 | None:intergenic | 40.0% | |
| ! | GGCGTATATCATAGGTTTTG+GGG | - | chr1.4:84516719-84516738 | None:intergenic | 40.0% |
| ! | GTGAATTTGGAACTCACTCT+TGG | + | chr1.4:84516942-84516961 | MS.gene029403:CDS | 40.0% |
| !! | GTGACCAACTTAAGTTGATG+CGG | + | chr1.4:84516348-84516367 | MS.gene029403:intron | 40.0% |
| !! | TTTGATTGGTAGCATTGGTG+AGG | - | chr1.4:84516168-84516187 | None:intergenic | 40.0% |
| !!! | GCTTATTTTGGACAGCGAAT+TGG | + | chr1.4:84516577-84516596 | MS.gene029403:CDS | 40.0% |
| AAATTTGGCAAGGAAGAGGG+TGG | - | chr1.4:84516119-84516138 | None:intergenic | 45.0% | |
| AGTCTCCCCAATTTCCATGT+TGG | - | chr1.4:84516874-84516893 | None:intergenic | 45.0% | |
| AGTGAACATAGCTAGCTACC+TGG | - | chr1.4:84516202-84516221 | None:intergenic | 45.0% | |
| GATATACGCCATGTGGCAAA+AGG | + | chr1.4:84516729-84516748 | MS.gene029403:CDS | 45.0% | |
| GGTACCAATGTGGACATCAA+AGG | + | chr1.4:84516750-84516769 | MS.gene029403:CDS | 45.0% | |
| TGCCACATGGCGTATATCAT+AGG | - | chr1.4:84516727-84516746 | None:intergenic | 45.0% | |
| ! | ATTGATGGGCAGACATCATC+AGG | + | chr1.4:84516666-84516685 | MS.gene029403:CDS | 45.0% |
| ! | CATTGGTACCTTTTGCCACA+TGG | - | chr1.4:84516740-84516759 | None:intergenic | 45.0% |
| ! | GCCAAATTTTATGGCCGAAC+CGG | + | chr1.4:84516130-84516149 | MS.gene029403:CDS | 45.0% |
| !! | ACCGGTTCGGCCATAAAATT+TGG | - | chr1.4:84516134-84516153 | None:intergenic | 45.0% |
| !! | TGTGGCAAAAGGTACCAATG+TGG | + | chr1.4:84516740-84516759 | MS.gene029403:CDS | 45.0% |
| ACTGAACCAACTCGTGGCTT+GGG | - | chr1.4:84516813-84516832 | None:intergenic | 50.0% | |
| ATCAGTTGCCCTGAATCCCA+AGG | + | chr1.4:84516088-84516107 | MS.gene029403:CDS | 50.0% | |
| CAACTGATCCACTCAAGGCA+GGG | - | chr1.4:84516076-84516095 | None:intergenic | 50.0% | |
| GAACATAGCTAGCTACCTGG+TGG | - | chr1.4:84516199-84516218 | None:intergenic | 50.0% | |
| GGAGATTGAGCAAACCGGTT+CGG | - | chr1.4:84516147-84516166 | None:intergenic | 50.0% | |
| GGTGAGGAGATTGAGCAAAC+CGG | - | chr1.4:84516152-84516171 | None:intergenic | 50.0% | |
| TCAGTTGCCCTGAATCCCAA+GGG | + | chr1.4:84516089-84516108 | MS.gene029403:CDS | 50.0% | |
| TCATTGTTGTACGAGGCAGC+TGG | + | chr1.4:84516522-84516541 | MS.gene029403:CDS | 50.0% | |
| !! | ACGAGTTGGTTCAGTCGACT+CGG | + | chr1.4:84516818-84516837 | MS.gene029403:CDS | 50.0% |
| !! | ATGGGGCGCTTGGCTTATTT+TGG | + | chr1.4:84516565-84516584 | MS.gene029403:CDS | 50.0% |
| AAGCCAAGCGCCCCATATGT+GGG | - | chr1.4:84516561-84516580 | None:intergenic | 55.0% | |
| ATGCGGCCGCAATACCGTTA+TGG | + | chr1.4:84516365-84516384 | MS.gene029403:intron | 55.0% | |
| CAGGGCAACTGATCCACTCA+AGG | - | chr1.4:84516081-84516100 | None:intergenic | 55.0% | |
| GACTGAACCAACTCGTGGCT+TGG | - | chr1.4:84516814-84516833 | None:intergenic | 55.0% | |
| GAGTCGACTGAACCAACTCG+TGG | - | chr1.4:84516819-84516838 | None:intergenic | 55.0% | |
| GCAACTGATCCACTCAAGGC+AGG | - | chr1.4:84516077-84516096 | None:intergenic | 55.0% | |
| GCGGCCGCATCAACTTAAGT+TGG | - | chr1.4:84516355-84516374 | None:intergenic | 55.0% | |
| GTACGAGGCAGCTGGTAGAT+TGG | + | chr1.4:84516530-84516549 | MS.gene029403:CDS | 55.0% | |
| TAAGCCAAGCGCCCCATATG+TGG | - | chr1.4:84516562-84516581 | None:intergenic | 55.0% | |
| TCATCAAGCCCTGCCTTGAG+TGG | + | chr1.4:84516065-84516084 | MS.gene029403:CDS | 55.0% | |
| TGGCATGCCCTTGGGATTCA+GGG | - | chr1.4:84516099-84516118 | None:intergenic | 55.0% | |
| ! | AATCCCACATATGGGGCGCT+TGG | + | chr1.4:84516555-84516574 | MS.gene029403:CDS | 55.0% |
| ! | GCAGTTGAAGCTGTGCTGAC+TGG | + | chr1.4:84516615-84516634 | MS.gene029403:CDS | 55.0% |
| CTGAAGCCCAAGCCACGAGT+TGG | + | chr1.4:84516804-84516823 | MS.gene029403:CDS | 60.0% | |
| GAAGAGGGTGGCATGCCCTT+GGG | - | chr1.4:84516107-84516126 | None:intergenic | 60.0% | |
| GTGGCATGCCCTTGGGATTC+AGG | - | chr1.4:84516100-84516119 | None:intergenic | 60.0% | |
| GGAAGAGGGTGGCATGCCCT+TGG | - | chr1.4:84516108-84516127 | None:intergenic | 65.0% | |
| ! | GGGTGTCGTGTGCTCCGCAA+AGG | + | chr1.4:84516025-84516044 | MS.gene029403:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84516007 | 84517010 | 84516007 | ID=MS.gene029403 |
| chr1.4 | mRNA | 84516007 | 84517010 | 84516007 | ID=MS.gene029403.t1;Parent=MS.gene029403 |
| chr1.4 | exon | 84516007 | 84516202 | 84516007 | ID=MS.gene029403.t1.exon1;Parent=MS.gene029403.t1 |
| chr1.4 | CDS | 84516007 | 84516202 | 84516007 | ID=cds.MS.gene029403.t1;Parent=MS.gene029403.t1 |
| chr1.4 | exon | 84516511 | 84517010 | 84516511 | ID=MS.gene029403.t1.exon2;Parent=MS.gene029403.t1 |
| chr1.4 | CDS | 84516511 | 84517010 | 84516511 | ID=cds.MS.gene029403.t1;Parent=MS.gene029403.t1 |
| Gene Sequence |
| Protein sequence |
