Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029630.t1 | AES97184.2 | 95 | 437 | 22 | 0 | 1 | 437 | 64 | 500 | 5.70E-238 | 833.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029630.t1 | Q94JW8 | 34.3 | 461 | 190 | 13 | 1 | 421 | 1 | 388 | 1.0e-49 | 199.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029630.t1 | G7JX04 | 95.0 | 437 | 22 | 0 | 1 | 437 | 64 | 500 | 4.1e-238 | 833.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene029630.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029630.t1 | MTR_5g046670 | 94.966 | 437 | 22 | 0 | 1 | 437 | 64 | 500 | 0.0 | 845 |
| MS.gene029630.t1 | MTR_2g461920 | 40.217 | 368 | 190 | 11 | 1 | 354 | 1 | 352 | 1.95e-60 | 206 |
| MS.gene029630.t1 | MTR_4g109770 | 50.459 | 218 | 85 | 8 | 111 | 315 | 56 | 263 | 2.15e-51 | 180 |
| MS.gene029630.t1 | MTR_3g085180 | 37.349 | 249 | 120 | 7 | 121 | 336 | 108 | 353 | 2.94e-38 | 144 |
| MS.gene029630.t1 | MTR_3g099080 | 46.753 | 154 | 77 | 2 | 131 | 279 | 43 | 196 | 2.41e-37 | 140 |
| MS.gene029630.t1 | MTR_8g096780 | 47.712 | 153 | 75 | 3 | 131 | 279 | 45 | 196 | 7.10e-36 | 136 |
| MS.gene029630.t1 | MTR_1g053715 | 59.434 | 106 | 42 | 1 | 179 | 283 | 72 | 177 | 1.58e-35 | 134 |
| MS.gene029630.t1 | MTR_4g088555 | 60.638 | 94 | 34 | 1 | 166 | 259 | 51 | 141 | 7.18e-35 | 127 |
| MS.gene029630.t1 | MTR_7g444860 | 73.077 | 78 | 21 | 0 | 181 | 258 | 149 | 226 | 1.57e-34 | 131 |
| MS.gene029630.t1 | MTR_2g014200 | 66.667 | 84 | 28 | 0 | 176 | 259 | 59 | 142 | 9.92e-34 | 124 |
| MS.gene029630.t1 | MTR_7g092930 | 70.130 | 77 | 23 | 0 | 179 | 255 | 66 | 142 | 3.16e-33 | 128 |
| MS.gene029630.t1 | MTR_7g028740 | 58.000 | 100 | 42 | 0 | 180 | 279 | 76 | 175 | 3.88e-33 | 128 |
| MS.gene029630.t1 | MTR_8g005960 | 61.458 | 96 | 33 | 1 | 165 | 256 | 167 | 262 | 5.53e-33 | 127 |
| MS.gene029630.t1 | MTR_2g046550 | 61.702 | 94 | 35 | 1 | 166 | 258 | 123 | 216 | 2.50e-32 | 130 |
| MS.gene029630.t1 | MTR_2g078770 | 70.130 | 77 | 23 | 0 | 178 | 254 | 55 | 131 | 5.25e-32 | 120 |
| MS.gene029630.t1 | MTR_1g086250 | 60.674 | 89 | 35 | 0 | 166 | 254 | 132 | 220 | 6.18e-31 | 126 |
| MS.gene029630.t1 | MTR_1g035010 | 63.441 | 93 | 33 | 1 | 167 | 258 | 89 | 181 | 8.38e-31 | 126 |
| MS.gene029630.t1 | MTR_8g463140 | 67.105 | 76 | 25 | 0 | 179 | 254 | 63 | 138 | 1.44e-30 | 116 |
| MS.gene029630.t1 | MTR_7g110320 | 67.949 | 78 | 25 | 0 | 181 | 258 | 145 | 222 | 1.59e-30 | 125 |
| MS.gene029630.t1 | MTR_7g110320 | 67.949 | 78 | 25 | 0 | 181 | 258 | 145 | 222 | 2.50e-30 | 124 |
| MS.gene029630.t1 | MTR_8g080680 | 31.818 | 242 | 135 | 7 | 130 | 353 | 80 | 309 | 8.49e-28 | 114 |
| MS.gene029630.t1 | MTR_8g080690 | 41.333 | 150 | 82 | 2 | 107 | 256 | 83 | 226 | 4.06e-27 | 112 |
| MS.gene029630.t1 | MTR_8g080670 | 60.000 | 75 | 30 | 0 | 179 | 253 | 160 | 234 | 8.34e-26 | 108 |
| MS.gene029630.t1 | MTR_2g020620 | 49.275 | 69 | 35 | 0 | 190 | 258 | 99 | 167 | 4.95e-17 | 84.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029630.t1 | AT1G69170 | 34.490 | 461 | 189 | 15 | 1 | 421 | 1 | 388 | 1.71e-60 | 202 |
| MS.gene029630.t1 | AT5G50670 | 58.416 | 101 | 41 | 1 | 179 | 279 | 99 | 198 | 4.79e-35 | 133 |
| MS.gene029630.t1 | AT5G50670 | 58.416 | 101 | 41 | 1 | 179 | 279 | 99 | 198 | 4.79e-35 | 133 |
| MS.gene029630.t1 | AT5G50570 | 58.416 | 101 | 41 | 1 | 179 | 279 | 99 | 198 | 4.79e-35 | 133 |
| MS.gene029630.t1 | AT5G50570 | 58.416 | 101 | 41 | 1 | 179 | 279 | 99 | 198 | 4.79e-35 | 133 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 1.22e-34 | 132 |
| MS.gene029630.t1 | AT2G42200 | 74.359 | 78 | 20 | 0 | 179 | 256 | 72 | 149 | 1.63e-34 | 132 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.91e-34 | 132 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.91e-34 | 132 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.91e-34 | 132 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.91e-34 | 132 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.91e-34 | 132 |
| MS.gene029630.t1 | AT1G27370 | 50.400 | 125 | 61 | 1 | 133 | 256 | 127 | 251 | 3.91e-34 | 132 |
| MS.gene029630.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 2.95e-33 | 133 |
| MS.gene029630.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 3.07e-33 | 132 |
| MS.gene029630.t1 | AT1G27360 | 35.565 | 239 | 136 | 5 | 133 | 369 | 127 | 349 | 4.06e-33 | 129 |
| MS.gene029630.t1 | AT1G27360 | 35.565 | 239 | 136 | 5 | 133 | 369 | 127 | 349 | 4.06e-33 | 129 |
| MS.gene029630.t1 | AT1G27360 | 35.565 | 239 | 136 | 5 | 133 | 369 | 127 | 349 | 4.06e-33 | 129 |
| MS.gene029630.t1 | AT1G27360 | 35.565 | 239 | 136 | 5 | 133 | 369 | 127 | 349 | 4.06e-33 | 129 |
| MS.gene029630.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.59e-33 | 129 |
| MS.gene029630.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.59e-33 | 129 |
| MS.gene029630.t1 | AT5G43270 | 70.130 | 77 | 23 | 0 | 179 | 255 | 167 | 243 | 4.59e-33 | 129 |
| MS.gene029630.t1 | AT1G76580 | 60.000 | 105 | 41 | 1 | 179 | 283 | 112 | 215 | 8.25e-33 | 132 |
| MS.gene029630.t1 | AT3G57920 | 63.265 | 98 | 34 | 1 | 181 | 276 | 59 | 156 | 1.51e-32 | 126 |
| MS.gene029630.t1 | AT1G20980 | 46.043 | 139 | 53 | 2 | 167 | 305 | 106 | 222 | 1.83e-32 | 131 |
| MS.gene029630.t1 | AT2G33810 | 64.557 | 79 | 28 | 0 | 180 | 258 | 53 | 131 | 2.87e-32 | 119 |
| MS.gene029630.t1 | AT3G60030 | 38.356 | 219 | 125 | 4 | 160 | 378 | 106 | 314 | 3.66e-32 | 130 |
| MS.gene029630.t1 | AT1G02065 | 52.174 | 115 | 51 | 1 | 144 | 254 | 147 | 261 | 5.68e-32 | 124 |
| MS.gene029630.t1 | AT2G47070 | 70.667 | 75 | 22 | 0 | 180 | 254 | 105 | 179 | 8.16e-31 | 126 |
| MS.gene029630.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 1.49e-29 | 113 |
| MS.gene029630.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 1.49e-29 | 113 |
| MS.gene029630.t1 | AT1G53160 | 65.333 | 75 | 26 | 0 | 180 | 254 | 53 | 127 | 1.76e-29 | 113 |
| MS.gene029630.t1 | AT3G15270 | 64.000 | 75 | 27 | 0 | 180 | 254 | 62 | 136 | 2.36e-29 | 113 |
| MS.gene029630.t1 | AT5G18830 | 42.453 | 106 | 58 | 2 | 165 | 268 | 123 | 227 | 1.79e-20 | 94.7 |
| MS.gene029630.t1 | AT5G18830 | 42.453 | 106 | 58 | 2 | 165 | 268 | 123 | 227 | 1.88e-20 | 94.7 |
| MS.gene029630.t1 | AT5G18830 | 42.453 | 106 | 58 | 2 | 165 | 268 | 123 | 227 | 1.95e-20 | 94.7 |
| MS.gene029630.t1 | AT2G47070 | 74.000 | 50 | 13 | 0 | 205 | 254 | 1 | 50 | 2.13e-18 | 88.2 |
| MS.gene029630.t1 | AT1G02065 | 46.154 | 91 | 41 | 2 | 144 | 228 | 147 | 235 | 9.10e-17 | 80.1 |
Find 82 sgRNAs with CRISPR-Local
Find 230 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTCCTATATGCCAAGTTTA+TGG | 0.214881 | 5.4:-36622587 | MS.gene029630:CDS |
| AACAAATAGCTTCTCTCTTC+AGG | 0.222642 | 5.4:+36623097 | None:intergenic |
| GATTTCCTATGGAATCTTCT+AGG | 0.252745 | 5.4:-36622925 | MS.gene029630:CDS |
| CACTTCTAGCTTACCTGCTT+TGG | 0.255243 | 5.4:-36622609 | MS.gene029630:CDS |
| TCCATGTGGGATAAACTCTA+AGG | 0.320657 | 5.4:-36619171 | MS.gene029630:CDS |
| TAAAGAGGTAGTTAAAAGTA+TGG | 0.329448 | 5.4:-36622963 | MS.gene029630:CDS |
| TCTAGTTGAGGGCAGCAAAC+TGG | 0.338417 | 5.4:+36619407 | None:intergenic |
| GAAGCAAAGAAATTCTGTTT+TGG | 0.338535 | 5.4:-36619078 | MS.gene029630:CDS |
| CTGATGGATTTCCTGCTGTT+TGG | 0.343509 | 5.4:+36619306 | None:intergenic |
| TTTGCTTCTCCACCCTTTGA+AGG | 0.344895 | 5.4:+36619093 | None:intergenic |
| TTCTAGGACTGTTCGTGGTT+CGG | 0.375535 | 5.4:-36622909 | MS.gene029630:CDS |
| AAGTATGGAATTTGTGGACT+TGG | 0.383614 | 5.4:-36622948 | MS.gene029630:CDS |
| AATTTGTAGTAATGGAATCT+TGG | 0.388462 | 5.4:-36623129 | None:intergenic |
| AATTGTCTTCTAACCTTCAA+AGG | 0.400965 | 5.4:-36619106 | MS.gene029630:CDS |
| TCATTGATTGATTTGAAGCT+AGG | 0.417700 | 5.4:-36622734 | MS.gene029630:CDS |
| GACGATAACTTTAGCTGTCT+TGG | 0.422044 | 5.4:+36622499 | None:intergenic |
| TTAGTAGATTGTCAAGGTGT+GGG | 0.426117 | 5.4:-36622707 | MS.gene029630:CDS |
| TTCTTGAATTAGGTTCCATC+TGG | 0.429111 | 5.4:-36621911 | MS.gene029630:intron |
| CAACCATAAACTTGGCATAT+AGG | 0.430185 | 5.4:+36622584 | None:intergenic |
| GCTAGAAGTGCGGGATCTCT+TGG | 0.433355 | 5.4:+36622622 | None:intergenic |
| TGTGGACTTGGGATTTCCTA+TGG | 0.435441 | 5.4:-36622936 | MS.gene029630:CDS |
| TGGATTTAATTCAGATAAAG+AGG | 0.438758 | 5.4:-36622978 | MS.gene029630:CDS |
| GCTAACACGCTTTGATGAAT+CGG | 0.443304 | 5.4:+36622644 | None:intergenic |
| TAGAAAACCCTTAGTTGAAT+GGG | 0.448095 | 5.4:-36623032 | MS.gene029630:CDS |
| AGTTAAAAGTATGGAATTTG+TGG | 0.448427 | 5.4:-36622954 | MS.gene029630:CDS |
| GCTGTTTCTCAAACGTGTAA+AGG | 0.456116 | 5.4:-36619034 | None:intergenic |
| TCAAAGTGGACATATCAAAC+TGG | 0.462398 | 5.4:-36619438 | MS.gene029630:CDS |
| CTAGAAGTTCCCTCCACACT+TGG | 0.467045 | 5.4:-36619389 | MS.gene029630:CDS |
| CTAGTTGAGGGCAGCAAACT+GGG | 0.468536 | 5.4:+36619408 | None:intergenic |
| CCATGTTACAACCATAAACT+TGG | 0.470816 | 5.4:+36622576 | None:intergenic |
| GTAGAAAACCCTTAGTTGAA+TGG | 0.471526 | 5.4:-36623033 | MS.gene029630:CDS |
| AGTATGGAATTTGTGGACTT+GGG | 0.478417 | 5.4:-36622947 | MS.gene029630:CDS |
| TCAAAGGTGTTTCAGAAACT+TGG | 0.479177 | 5.4:+36619234 | None:intergenic |
| ACAAATAGCTTCTCTCTTCA+GGG | 0.479898 | 5.4:+36623098 | None:intergenic |
| AAAAGCAATAACATGGATAG+AGG | 0.481057 | 5.4:+36622832 | None:intergenic |
| ATTGTCTTCTAACCTTCAAA+GGG | 0.489133 | 5.4:-36619105 | MS.gene029630:CDS |
| TATCTTGAGTGCGGATGTCC+CGG | 0.493515 | 5.4:+36619264 | None:intergenic |
| TCATGTAACTTTGAGCGAGA+TGG | 0.496792 | 5.4:-36622998 | MS.gene029630:CDS |
| CCTCGAAAGATTACCACAAA+AGG | 0.498780 | 5.4:-36622544 | MS.gene029630:CDS |
| GAATCTTCTAGGACTGTTCG+TGG | 0.500953 | 5.4:-36622914 | MS.gene029630:CDS |
| TTTCCTGCTGTTTGGTGCGA+CGG | 0.501630 | 5.4:+36619314 | None:intergenic |
| ACAGCTAAAGTTATCGTCAA+TGG | 0.504384 | 5.4:-36622494 | MS.gene029630:CDS |
| ACTTTGAAATATGTCTTGAA+AGG | 0.507641 | 5.4:+36619496 | None:intergenic |
| CATTGATTGATTTGAAGCTA+GGG | 0.508340 | 5.4:-36622733 | MS.gene029630:CDS |
| AATCAAACTGAGGTTTCCTT+CGG | 0.512482 | 5.4:+36621827 | None:intergenic |
| AGCAGGTAAGCTAGAAGTGC+GGG | 0.516979 | 5.4:+36622613 | None:intergenic |
| ATGGTAAGCGCAGTTGTCGC+AGG | 0.518129 | 5.4:-36621873 | MS.gene029630:CDS |
| TTCGCGGAGCTTGTCATCAA+AGG | 0.523627 | 5.4:+36619218 | None:intergenic |
| TCCTTAGAGTTTATCCCACA+TGG | 0.525879 | 5.4:+36619170 | None:intergenic |
| GACATCCGCACTCAAGATAG+AGG | 0.528344 | 5.4:-36619260 | MS.gene029630:CDS |
| TGGAGGGAACTTCTAGTTGA+GGG | 0.531204 | 5.4:+36619396 | None:intergenic |
| AAAGTACTGGCAGTAGCTGA+TGG | 0.532169 | 5.4:+36619290 | None:intergenic |
| TCAGACATCTAGCTGTGAGC+TGG | 0.532209 | 5.4:-36622885 | MS.gene029630:CDS |
| AGTTGTCGCAGGCGTCTAGC+TGG | 0.532617 | 5.4:-36621862 | MS.gene029630:CDS |
| TAGTAGATTGTCAAGGTGTG+GGG | 0.537134 | 5.4:-36622706 | MS.gene029630:CDS |
| AAGATTCTTCAGTCATATCA+AGG | 0.537497 | 5.4:-36621784 | MS.gene029630:intron |
| TGGACATATCAAACTGGAAG+AGG | 0.540218 | 5.4:-36619432 | MS.gene029630:CDS |
| ATTTCGTTCATGTTTATTCG+CGG | 0.540908 | 5.4:+36619202 | None:intergenic |
| CCAAGTTTATGGTTGTAACA+TGG | 0.549560 | 5.4:-36622576 | MS.gene029630:CDS |
| AATCCGTCGCACCAAACAGC+AGG | 0.562264 | 5.4:-36619317 | MS.gene029630:CDS |
| ATTAGTAGATTGTCAAGGTG+TGG | 0.566271 | 5.4:-36622708 | MS.gene029630:CDS |
| TTTCAAGACATATTTCAAAG+TGG | 0.566498 | 5.4:-36619494 | MS.gene029630:CDS |
| AGCTCGTGTCCAAGTGTGGA+GGG | 0.570221 | 5.4:+36619380 | None:intergenic |
| CTGGACACAATGAGCGCCGA+AGG | 0.574137 | 5.4:-36621843 | MS.gene029630:CDS |
| AGATAGCTCGTGTCCAAGTG+TGG | 0.578773 | 5.4:+36619376 | None:intergenic |
| CATGATCAAATCTCTCAAAG+TGG | 0.581788 | 5.4:-36619452 | MS.gene029630:CDS |
| CTGACAGAAGAGAGAGAGCA+TGG | 0.588418 | 5.4:+36619351 | None:intergenic |
| GTCTTCTAACCTTCAAAGGG+TGG | 0.588488 | 5.4:-36619102 | MS.gene029630:CDS |
| CGTCGAACTCAGTTACCAGA+TGG | 0.604322 | 5.4:+36621896 | None:intergenic |
| ATGAATCAAAAGCAATAACA+TGG | 0.620760 | 5.4:+36622825 | None:intergenic |
| TGGCATATAGGAGCCAAAGC+AGG | 0.622572 | 5.4:+36622596 | None:intergenic |
| GTGGAGGGAACTTCTAGTTG+AGG | 0.623909 | 5.4:+36619395 | None:intergenic |
| CTAGTCATGTAATCAAACTG+AGG | 0.623999 | 5.4:+36621817 | None:intergenic |
| TAGCTCGTGTCCAAGTGTGG+AGG | 0.629041 | 5.4:+36619379 | None:intergenic |
| TCGTCAATGGTGTTGAACAG+AGG | 0.637850 | 5.4:-36622481 | MS.gene029630:CDS |
| ACAGTCCTAGAAGATTCCAT+AGG | 0.645968 | 5.4:+36622920 | None:intergenic |
| GAAATTATTAAATCTGAACA+TGG | 0.656589 | 5.4:-36619149 | MS.gene029630:CDS |
| GGTCGCCTCTATCTTGAGTG+CGG | 0.658611 | 5.4:+36619255 | None:intergenic |
| GGGAGATTAGTAGATTGTCA+AGG | 0.666785 | 5.4:-36622713 | MS.gene029630:CDS |
| CTGGTAACTGAGTTCGACGA+TGG | 0.666961 | 5.4:-36621892 | MS.gene029630:CDS |
| AAGCAGGTAAGCTAGAAGTG+CGG | 0.678203 | 5.4:+36622612 | None:intergenic |
| CAATTGAAACAGATCAACAG+TGG | 0.725111 | 5.4:+36619124 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATAAATGATTTAAATAA+TGG | + | chr5.4:36621765-36621784 | None:intergenic | 10.0% |
| !! | AGAAATAATAAGATTATAAC+AGG | + | chr5.4:36622544-36622563 | None:intergenic | 15.0% |
| !! | ATAAAATTTATAACCCAAAT+GGG | - | chr5.4:36620678-36620697 | MS.gene029630:intron | 15.0% |
| !! | ATAAATGATTTAAATAATGG+TGG | + | chr5.4:36621762-36621781 | None:intergenic | 15.0% |
| !! | TAATAGAAAAATATACCATA+TGG | + | chr5.4:36621147-36621166 | None:intergenic | 15.0% |
| !! | TAATATCTTAGAATTGTTAA+TGG | - | chr5.4:36620147-36620166 | MS.gene029630:intron | 15.0% |
| !! | TATAAAATTTATAACCCAAA+TGG | - | chr5.4:36620677-36620696 | MS.gene029630:intron | 15.0% |
| !! | TATTTCATACAAATTTAGTT+AGG | + | chr5.4:36621338-36621357 | None:intergenic | 15.0% |
| !! | TCAATTACTATAAGAAATTT+GGG | - | chr5.4:36621422-36621441 | MS.gene029630:intron | 15.0% |
| !!! | AAATGTAATTTTAATTCCTA+AGG | + | chr5.4:36619735-36619754 | None:intergenic | 15.0% |
| !!! | GTATTTTTTTTACTTTCTTA+AGG | - | chr5.4:36619931-36619950 | MS.gene029630:intron | 15.0% |
| !!! | TATATTTTTCTATTAGCTTA+TGG | - | chr5.4:36621152-36621171 | MS.gene029630:intron | 15.0% |
| !!! | TTTCAGTTTTTAATAAGATT+TGG | - | chr5.4:36620807-36620826 | MS.gene029630:intron | 15.0% |
| !! | AAACTAATTTACATCTACAT+AGG | + | chr5.4:36622055-36622074 | None:intergenic | 20.0% |
| !! | ATCTTATAATTTAGACTTAG+AGG | + | chr5.4:36621260-36621279 | None:intergenic | 20.0% |
| !! | CATATTGAAAGAAAATTGAT+AGG | - | chr5.4:36621048-36621067 | MS.gene029630:intron | 20.0% |
| !! | CATGTAATTTAAAAATCAGA+AGG | - | chr5.4:36620950-36620969 | MS.gene029630:intron | 20.0% |
| !! | CTAAATTAAATCTTCCTAAT+GGG | - | chr5.4:36622562-36622581 | MS.gene029630:CDS | 20.0% |
| !! | GAAATTATTAAATCTGAACA+TGG | - | chr5.4:36623006-36623025 | MS.gene029630:CDS | 20.0% |
| !! | GTCAATTACTATAAGAAATT+TGG | - | chr5.4:36621421-36621440 | MS.gene029630:intron | 20.0% |
| !! | TCAATATCATATACATTGAT+CGG | + | chr5.4:36620047-36620066 | None:intergenic | 20.0% |
| !! | TCTAAATTAAATCTTCCTAA+TGG | - | chr5.4:36622561-36622580 | MS.gene029630:CDS | 20.0% |
| !! | TTAAACATTTCAAACAAAAG+AGG | - | chr5.4:36621542-36621561 | MS.gene029630:intron | 20.0% |
| !! | TTGTATGAAATATCAATCAT+TGG | - | chr5.4:36621346-36621365 | MS.gene029630:intron | 20.0% |
| !! | TTTCATCGAGTTTATTTATT+AGG | + | chr5.4:36621871-36621890 | None:intergenic | 20.0% |
| !!! | AAACAATTACACTTGTTAAA+TGG | + | chr5.4:36621640-36621659 | None:intergenic | 20.0% |
| !!! | AACTCTATTATATTTTGAAG+TGG | + | chr5.4:36620872-36620891 | None:intergenic | 20.0% |
| !!! | ATATCAAAGAAGTACAAAAA+TGG | + | chr5.4:36619834-36619853 | None:intergenic | 20.0% |
| !!! | CTTATTTTTGTTCTTGAATT+AGG | - | chr5.4:36620234-36620253 | MS.gene029630:intron | 20.0% |
| !!! | GAAATATAATTCTAGTTGTT+AGG | + | chr5.4:36620575-36620594 | None:intergenic | 20.0% |
| !!! | TATAACTGCATTTTAAAACT+AGG | - | chr5.4:36622127-36622146 | MS.gene029630:intron | 20.0% |
| !!! | TATCAAAGAAGTACAAAAAT+GGG | + | chr5.4:36619833-36619852 | None:intergenic | 20.0% |
| !!! | TCTGATTTTTAAATTACATG+TGG | + | chr5.4:36620950-36620969 | None:intergenic | 20.0% |
| !!! | TTACATTTTTACTGTTATTC+TGG | - | chr5.4:36622316-36622335 | MS.gene029630:intron | 20.0% |
| !!! | TTTAAAATGCAGTTATAAAG+CGG | + | chr5.4:36622124-36622143 | None:intergenic | 20.0% |
| !!! | TTTTATCAAAGTCAATATGA+AGG | + | chr5.4:36620766-36620785 | None:intergenic | 20.0% |
| ! | AAACTAAGTTAAAGAATCCA+TGG | + | chr5.4:36622164-36622183 | None:intergenic | 25.0% |
| ! | ACACAAAATCCTAACTAATA+TGG | + | chr5.4:36621000-36621019 | None:intergenic | 25.0% |
| ! | ATAGATAAGACAGCAAAAAT+TGG | - | chr5.4:36620429-36620448 | MS.gene029630:intron | 25.0% |
| ! | ATGAACTGAAATTAAAACCT+TGG | - | chr5.4:36621493-36621512 | MS.gene029630:intron | 25.0% |
| ! | ATGAATCAAAAGCAATAACA+TGG | + | chr5.4:36619333-36619352 | None:intergenic | 25.0% |
| ! | CAATTCATGATTTCAATAGA+AGG | - | chr5.4:36621783-36621802 | MS.gene029630:intron | 25.0% |
| ! | CAATTGTCAAATAAACTAGA+TGG | + | chr5.4:36620012-36620031 | None:intergenic | 25.0% |
| ! | GTTACAATTTAGACTATGAA+TGG | + | chr5.4:36620123-36620142 | None:intergenic | 25.0% |
| ! | GTTTCTTAACCATATTAGTT+AGG | - | chr5.4:36620988-36621007 | MS.gene029630:intron | 25.0% |
| ! | TAAAGAGGTAGTTAAAAGTA+TGG | - | chr5.4:36619192-36619211 | MS.gene029630:CDS | 25.0% |
| ! | TCATAGTCTAAATTGTAACA+TGG | - | chr5.4:36620124-36620143 | MS.gene029630:intron | 25.0% |
| ! | TGGATTTAATTCAGATAAAG+AGG | - | chr5.4:36619177-36619196 | MS.gene029630:CDS | 25.0% |
| ! | TTATGTCTGATAATTAGTTG+CGG | - | chr5.4:36620481-36620500 | MS.gene029630:intron | 25.0% |
| ! | TTGACTTTGATAAAAATCTG+TGG | - | chr5.4:36620771-36620790 | MS.gene029630:intron | 25.0% |
| ! | TTTCAAGACATATTTCAAAG+TGG | - | chr5.4:36622661-36622680 | MS.gene029630:CDS | 25.0% |
| !! | AGTTAAAAGTATGGAATTTG+TGG | - | chr5.4:36619201-36619220 | MS.gene029630:CDS | 25.0% |
| !! | ATCAAAGAAGTACAAAAATG+GGG | + | chr5.4:36619832-36619851 | None:intergenic | 25.0% |
| !! | CTTTTTAAACGTCAAAATTG+TGG | - | chr5.4:36622233-36622252 | MS.gene029630:intron | 25.0% |
| !! | GATTTTTAAATTACATGTGG+TGG | + | chr5.4:36620947-36620966 | None:intergenic | 25.0% |
| !! | GCAAAATTATGAATTTTCGA+TGG | - | chr5.4:36622418-36622437 | MS.gene029630:intron | 25.0% |
| !!! | AAAAACTAGTCTTACAACAT+TGG | + | chr5.4:36621707-36621726 | None:intergenic | 25.0% |
| !!! | AAATTCTGTTTTGGTAAAGT+GGG | - | chr5.4:36623086-36623105 | MS.gene029630:CDS | 25.0% |
| !!! | AAGGTTTTAATTTCAGTTCA+TGG | + | chr5.4:36621494-36621513 | None:intergenic | 25.0% |
| !!! | AATTTTGCAGTTGTTTTCAA+TGG | + | chr5.4:36622406-36622425 | None:intergenic | 25.0% |
| !!! | ACTCCATCTTTTAATTTTTG+TGG | - | chr5.4:36621595-36621614 | MS.gene029630:intron | 25.0% |
| !!! | ACTTTGAAATATGTCTTGAA+AGG | + | chr5.4:36622662-36622681 | None:intergenic | 25.0% |
| !!! | ACTTTTATAATGGATTTCGA+AGG | + | chr5.4:36620736-36620755 | None:intergenic | 25.0% |
| !!! | ATAGAGTTGATAGATAGATT+AGG | - | chr5.4:36620884-36620903 | MS.gene029630:intron | 25.0% |
| !!! | CTATTTGTTTTCTGATGAAA+TGG | - | chr5.4:36619072-36619091 | MS.gene029630:CDS | 25.0% |
| !!! | CTTAGTTTGAAGTTTTAAAC+TGG | - | chr5.4:36622176-36622195 | MS.gene029630:intron | 25.0% |
| !!! | TTCCAATTTTTTCGTTGTTT+TGG | + | chr5.4:36622278-36622297 | None:intergenic | 25.0% |
| AAAAGCAATAACATGGATAG+AGG | + | chr5.4:36619326-36619345 | None:intergenic | 30.0% | |
| AAGATTCTTCAGTCATATCA+AGG | - | chr5.4:36620371-36620390 | MS.gene029630:intron | 30.0% | |
| AATCAGAAGGTTTCTATTTC+AGG | - | chr5.4:36620963-36620982 | MS.gene029630:intron | 30.0% | |
| AATTCTCAAAAGAACAGATG+AGG | + | chr5.4:36620462-36620481 | None:intergenic | 30.0% | |
| AATTGTCTTCTAACCTTCAA+AGG | - | chr5.4:36623049-36623068 | MS.gene029630:CDS | 30.0% | |
| ACGGAAATATCATTTGTTCA+TGG | + | chr5.4:36620533-36620552 | None:intergenic | 30.0% | |
| ATACTTCTCTTACAATCAGA+TGG | - | chr5.4:36619757-36619776 | MS.gene029630:intron | 30.0% | |
| ATAGCTTAAATCTCTCAAGT+TGG | - | chr5.4:36621187-36621206 | MS.gene029630:intron | 30.0% | |
| ATATTTCCAAATTGCCATCA+TGG | - | chr5.4:36620588-36620607 | MS.gene029630:intron | 30.0% | |
| ATTGTCTTCTAACCTTCAAA+GGG | - | chr5.4:36623050-36623069 | MS.gene029630:CDS | 30.0% | |
| ATTTCGTTCATGTTTATTCG+CGG | + | chr5.4:36622956-36622975 | None:intergenic | 30.0% | |
| CAAATAAACTAGATGGCATT+TGG | + | chr5.4:36620005-36620024 | None:intergenic | 30.0% | |
| CAAATATCTTATTCCTAGCA+TGG | + | chr5.4:36620648-36620667 | None:intergenic | 30.0% | |
| GGACCACAAAAATTAAAAGA+TGG | + | chr5.4:36621601-36621620 | None:intergenic | 30.0% | |
| GTCCAAAACAACGAAAAAAT+TGG | - | chr5.4:36622273-36622292 | MS.gene029630:intron | 30.0% | |
| TAACTCTATTGAACTCTTCA+CGG | + | chr5.4:36620552-36620571 | None:intergenic | 30.0% | |
| TAGAAAACCCTTAGTTGAAT+GGG | - | chr5.4:36619123-36619142 | MS.gene029630:CDS | 30.0% | |
| TTCTCTTACACTAAATGTGT+AGG | - | chr5.4:36622622-36622641 | MS.gene029630:CDS | 30.0% | |
| TTGTCTTTCTGTTTGATGTT+TGG | - | chr5.4:36621995-36622014 | MS.gene029630:intron | 30.0% | |
| TTGTGCATAAAAAACTCTGA+TGG | + | chr5.4:36621667-36621686 | None:intergenic | 30.0% | |
| ! | AGATTTGATCATGCTTTTCT+GGG | + | chr5.4:36622696-36622715 | None:intergenic | 30.0% |
| ! | AGGATGCTACACTTTTATAA+TGG | + | chr5.4:36620746-36620765 | None:intergenic | 30.0% |
| ! | ATTTTCGATGGATGAGATAA+AGG | - | chr5.4:36622430-36622449 | MS.gene029630:intron | 30.0% |
| ! | CTTTCTTAAGGTTTTCTTTG+TGG | - | chr5.4:36619943-36619962 | MS.gene029630:intron | 30.0% |
| ! | GAAATTTGGGTTAAGTAATG+CGG | - | chr5.4:36621435-36621454 | MS.gene029630:intron | 30.0% |
| ! | GAAGCAAAGAAATTCTGTTT+TGG | - | chr5.4:36623077-36623096 | MS.gene029630:CDS | 30.0% |
| ! | TAGGATTTTGTGTGAAAGTA+GGG | - | chr5.4:36621007-36621026 | MS.gene029630:intron | 30.0% |
| ! | TAGGTCATATTTTCCCATTT+GGG | + | chr5.4:36620694-36620713 | None:intergenic | 30.0% |
| ! | TCTATTAGCTTATGGTATAC+AGG | - | chr5.4:36621160-36621179 | MS.gene029630:intron | 30.0% |
| ! | TTAGGATTTTGTGTGAAAGT+AGG | - | chr5.4:36621006-36621025 | MS.gene029630:intron | 30.0% |
| ! | TTAGGTCATATTTTCCCATT+TGG | + | chr5.4:36620695-36620714 | None:intergenic | 30.0% |
| ! | TTGTTTTCCCATTCAACTAA+GGG | + | chr5.4:36619133-36619152 | None:intergenic | 30.0% |
| !! | AAAAATACGAGAAGCATTGA+TGG | + | chr5.4:36619919-36619938 | None:intergenic | 30.0% |
| !! | CATTGATTGATTTGAAGCTA+GGG | - | chr5.4:36619422-36619441 | MS.gene029630:CDS | 30.0% |
| !! | TCATTGATTGATTTGAAGCT+AGG | - | chr5.4:36619421-36619440 | MS.gene029630:CDS | 30.0% |
| !! | TGAGAAAACTCTTACTTTTC+TGG | + | chr5.4:36619885-36619904 | None:intergenic | 30.0% |
| !! | TGCTTTTGATTCATCTTTTG+CGG | - | chr5.4:36619339-36619358 | MS.gene029630:CDS | 30.0% |
| !! | TTCTGGTTGACATTTTAATG+AGG | - | chr5.4:36622333-36622352 | MS.gene029630:intron | 30.0% |
| !! | TTTGTTTTCCCATTCAACTA+AGG | + | chr5.4:36619134-36619153 | None:intergenic | 30.0% |
| !!! | AGTTTTTTGACTTTGTGATG+TGG | - | chr5.4:36621119-36621138 | MS.gene029630:intron | 30.0% |
| !!! | GAAATTCTGTTTTGGTAAAG+TGG | - | chr5.4:36623085-36623104 | MS.gene029630:CDS | 30.0% |
| !!! | GGTATATTTTTTGGTTCCTT+AGG | - | chr5.4:36619716-36619735 | MS.gene029630:intron | 30.0% |
| !!! | TTTTAATTTCAGTTCATGGC+AGG | + | chr5.4:36621490-36621509 | None:intergenic | 30.0% |
| !!! | TTTTAATTTTTGTGGTCCCA+GGG | - | chr5.4:36621603-36621622 | MS.gene029630:intron | 30.0% |
| AACAAATAGCTTCTCTCTTC+AGG | + | chr5.4:36619061-36619080 | None:intergenic | 35.0% | |
| AAGTATGGAATTTGTGGACT+TGG | - | chr5.4:36619207-36619226 | MS.gene029630:CDS | 35.0% | |
| AAGTTAAAGAATCCATGGTG+TGG | + | chr5.4:36622159-36622178 | None:intergenic | 35.0% | |
| AATCAAACTGAGGTTTCCTT+CGG | + | chr5.4:36620331-36620350 | None:intergenic | 35.0% | |
| AATCCTCATAAACACCATGA+TGG | + | chr5.4:36620605-36620624 | None:intergenic | 35.0% | |
| ACAAATAGCTTCTCTCTTCA+GGG | + | chr5.4:36619060-36619079 | None:intergenic | 35.0% | |
| ACAGCTAAAGTTATCGTCAA+TGG | - | chr5.4:36619661-36619680 | MS.gene029630:intron | 35.0% | |
| AGTATGGAATTTGTGGACTT+GGG | - | chr5.4:36619208-36619227 | MS.gene029630:CDS | 35.0% | |
| ATGTGGTGGTTAAAGATTAG+AGG | + | chr5.4:36620933-36620952 | None:intergenic | 35.0% | |
| ATTAGTAGATTGTCAAGGTG+TGG | - | chr5.4:36619447-36619466 | MS.gene029630:CDS | 35.0% | |
| CAACCATAAACTTGGCATAT+AGG | + | chr5.4:36619574-36619593 | None:intergenic | 35.0% | |
| CAATAGAAGGTCATTGTTGT+TGG | - | chr5.4:36621796-36621815 | MS.gene029630:CDS | 35.0% | |
| CATGATCAAATCTCTCAAAG+TGG | - | chr5.4:36622703-36622722 | MS.gene029630:CDS | 35.0% | |
| CATGGTGTTTATGAGGATTT+AGG | - | chr5.4:36620606-36620625 | MS.gene029630:intron | 35.0% | |
| CCAAGTTTATGGTTGTAACA+TGG | - | chr5.4:36619579-36619598 | MS.gene029630:intron | 35.0% | |
| CCATGTTACAACCATAAACT+TGG | + | chr5.4:36619582-36619601 | None:intergenic | 35.0% | |
| CTAGTCATGTAATCAAACTG+AGG | + | chr5.4:36620341-36620360 | None:intergenic | 35.0% | |
| GAGTAAAGTGTGTGTACTTA+AGG | - | chr5.4:36621914-36621933 | MS.gene029630:intron | 35.0% | |
| GATTTCCTATGGAATCTTCT+AGG | - | chr5.4:36619230-36619249 | MS.gene029630:CDS | 35.0% | |
| GCAATGTAATGAGCTTTCAT+TGG | + | chr5.4:36622092-36622111 | None:intergenic | 35.0% | |
| GTAGAAAACCCTTAGTTGAA+TGG | - | chr5.4:36619122-36619141 | MS.gene029630:CDS | 35.0% | |
| GTTAAACTCTTATAGCAGAC+AGG | + | chr5.4:36622025-36622044 | None:intergenic | 35.0% | |
| TAAACACCATGATGGCAATT+TGG | + | chr5.4:36620597-36620616 | None:intergenic | 35.0% | |
| TAGACTATGAATGGCTACTT+TGG | + | chr5.4:36620114-36620133 | None:intergenic | 35.0% | |
| TAGATTCTTCGCTATGTATG+TGG | + | chr5.4:36622597-36622616 | None:intergenic | 35.0% | |
| TCAAAGTGGACATATCAAAC+TGG | - | chr5.4:36622717-36622736 | MS.gene029630:CDS | 35.0% | |
| TCTGCTATAAGAGTTTAACG+AGG | - | chr5.4:36622026-36622045 | MS.gene029630:intron | 35.0% | |
| TGATTAATACTCTTCCCTTG+AGG | + | chr5.4:36621214-36621233 | None:intergenic | 35.0% | |
| TTAGTAGATTGTCAAGGTGT+GGG | - | chr5.4:36619448-36619467 | MS.gene029630:CDS | 35.0% | |
| TTCTTGAATTAGGTTCCATC+TGG | - | chr5.4:36620244-36620263 | MS.gene029630:intron | 35.0% | |
| ! | AGTTATAAAGCGGACTTATG+TGG | + | chr5.4:36622114-36622133 | None:intergenic | 35.0% |
| ! | CACAAACTTTATGCCTTTTG+TGG | + | chr5.4:36619627-36619646 | None:intergenic | 35.0% |
| ! | GAAATGAGTCTTTTCCATGT+GGG | - | chr5.4:36622971-36622990 | MS.gene029630:CDS | 35.0% |
| ! | GAGATTTGATCATGCTTTTC+TGG | + | chr5.4:36622697-36622716 | None:intergenic | 35.0% |
| !! | TCAAAGGTGTTTCAGAAACT+TGG | + | chr5.4:36622924-36622943 | None:intergenic | 35.0% |
| !!! | AGTGCAGCAGGTATATTTTT+TGG | - | chr5.4:36619707-36619726 | MS.gene029630:intron | 35.0% |
| !!! | CTTTTAATTTTTGTGGTCCC+AGG | - | chr5.4:36621602-36621621 | MS.gene029630:intron | 35.0% |
| !!! | GAAGGTTTTTTCTGTCACTA+CGG | + | chr5.4:36620718-36620737 | None:intergenic | 35.0% |
| !!! | TTTTTTCTGTCACTACGGTT+AGG | + | chr5.4:36620713-36620732 | None:intergenic | 35.0% |
| ACAGTCCTAGAAGATTCCAT+AGG | + | chr5.4:36619238-36619257 | None:intergenic | 40.0% | |
| CAAGACTGGACATTTACAAG+TGG | + | chr5.4:36620174-36620193 | None:intergenic | 40.0% | |
| CAGAAGGTTTCTATTTCAGG+AGG | - | chr5.4:36620966-36620985 | MS.gene029630:intron | 40.0% | |
| CCTCGAAAGATTACCACAAA+AGG | - | chr5.4:36619611-36619630 | MS.gene029630:intron | 40.0% | |
| GACGATAACTTTAGCTGTCT+TGG | + | chr5.4:36619659-36619678 | None:intergenic | 40.0% | |
| GCTAACACGCTTTGATGAAT+CGG | + | chr5.4:36619514-36619533 | None:intergenic | 40.0% | |
| GCTCCTATATGCCAAGTTTA+TGG | - | chr5.4:36619568-36619587 | MS.gene029630:intron | 40.0% | |
| GGGAGATTAGTAGATTGTCA+AGG | - | chr5.4:36619442-36619461 | MS.gene029630:CDS | 40.0% | |
| GTACACACACTTTACTCTTG+CGG | + | chr5.4:36621911-36621930 | None:intergenic | 40.0% | |
| GTTTATGAGGATTTAGGTCC+TGG | - | chr5.4:36620612-36620631 | MS.gene029630:intron | 40.0% | |
| TAGCATGGAATAGATAGACC+AGG | + | chr5.4:36620633-36620652 | None:intergenic | 40.0% | |
| TAGTAGATTGTCAAGGTGTG+GGG | - | chr5.4:36619449-36619468 | MS.gene029630:CDS | 40.0% | |
| TCATGTAACTTTGAGCGAGA+TGG | - | chr5.4:36619157-36619176 | MS.gene029630:CDS | 40.0% | |
| TCCATGTGGGATAAACTCTA+AGG | - | chr5.4:36622984-36623003 | MS.gene029630:CDS | 40.0% | |
| TCCTTAGAGTTTATCCCACA+TGG | + | chr5.4:36622988-36623007 | None:intergenic | 40.0% | |
| TGCTCTCTTTCTAGATTCCA+AGG | + | chr5.4:36621513-36621532 | None:intergenic | 40.0% | |
| TGGACATATCAAACTGGAAG+AGG | - | chr5.4:36622723-36622742 | MS.gene029630:CDS | 40.0% | |
| TGGTCTATCTATTCCATGCT+AGG | - | chr5.4:36620632-36620651 | MS.gene029630:intron | 40.0% | |
| TTGCCATCATGGTGTTTATG+AGG | - | chr5.4:36620599-36620618 | MS.gene029630:intron | 40.0% | |
| ! | CCTTTTGTGGTAATCTTTCG+AGG | + | chr5.4:36619614-36619633 | None:intergenic | 40.0% |
| ! | CGAAATGAGTCTTTTCCATG+TGG | - | chr5.4:36622970-36622989 | MS.gene029630:CDS | 40.0% |
| ! | TAGTTTTTCGCTATCGTGGT+AGG | - | chr5.4:36621719-36621738 | MS.gene029630:intron | 40.0% |
| ! | TGTGTGTACTTAAGGCACTA+GGG | - | chr5.4:36621922-36621941 | MS.gene029630:intron | 40.0% |
| !! | GATCATGCTTTTCTGGGAAA+AGG | + | chr5.4:36622690-36622709 | None:intergenic | 40.0% |
| !!! | AGACTAGTTTTTCGCTATCG+TGG | - | chr5.4:36621715-36621734 | MS.gene029630:intron | 40.0% |
| !!! | CTACTGCCAGTACTTTTTTC+CGG | - | chr5.4:36622872-36622891 | MS.gene029630:CDS | 40.0% |
| !!! | TACTGCCAGTACTTTTTTCC+GGG | - | chr5.4:36622873-36622892 | MS.gene029630:CDS | 40.0% |
| AAATGGTCCACATCATTCCC+TGG | + | chr5.4:36621623-36621642 | None:intergenic | 45.0% | |
| AAGCAGGTAAGCTAGAAGTG+CGG | + | chr5.4:36619546-36619565 | None:intergenic | 45.0% | |
| AATGGTCCACATCATTCCCT+GGG | + | chr5.4:36621622-36621641 | None:intergenic | 45.0% | |
| ACTAGGCAAAAACCACACCA+TGG | - | chr5.4:36622144-36622163 | MS.gene029630:intron | 45.0% | |
| CTTTGTGATGTGGAGCCATA+TGG | - | chr5.4:36621129-36621148 | MS.gene029630:intron | 45.0% | |
| GAGCTTTCATTGGATGTCGT+CGG | + | chr5.4:36622082-36622101 | None:intergenic | 45.0% | |
| GTCTTCTAACCTTCAAAGGG+TGG | - | chr5.4:36623053-36623072 | MS.gene029630:CDS | 45.0% | |
| GTTAAGCCAGAACTGCATCA+GGG | + | chr5.4:36622458-36622477 | None:intergenic | 45.0% | |
| TACAGAGCAGTTTGCAAGAC+TGG | + | chr5.4:36620188-36620207 | None:intergenic | 45.0% | |
| TGTGGAACATCGTTCCCATT+AGG | + | chr5.4:36622579-36622598 | None:intergenic | 45.0% | |
| TGTGGACTTGGGATTTCCTA+TGG | - | chr5.4:36619219-36619238 | MS.gene029630:CDS | 45.0% | |
| TGTTAAGCCAGAACTGCATC+AGG | + | chr5.4:36622459-36622478 | None:intergenic | 45.0% | |
| TTAAGCCAGAACTGCATCAG+GGG | + | chr5.4:36622457-36622476 | None:intergenic | 45.0% | |
| TTTGCTTCTCCACCCTTTGA+AGG | + | chr5.4:36623065-36623084 | None:intergenic | 45.0% | |
| ! | GATGTCCCGGAAAAAAGTAC+TGG | + | chr5.4:36622881-36622900 | None:intergenic | 45.0% |
| ! | GTGTGTGTACTTAAGGCACT+AGG | - | chr5.4:36621921-36621940 | MS.gene029630:intron | 45.0% |
| ! | TCGTCAATGGTGTTGAACAG+AGG | - | chr5.4:36619674-36619693 | MS.gene029630:intron | 45.0% |
| ! | TGGAGGGAACTTCTAGTTGA+GGG | + | chr5.4:36622762-36622781 | None:intergenic | 45.0% |
| !! | AAAGTACTGGCAGTAGCTGA+TGG | + | chr5.4:36622868-36622887 | None:intergenic | 45.0% |
| !! | ATCTCTCAAGTTGGTCCTCA+AGG | - | chr5.4:36621196-36621215 | MS.gene029630:intron | 45.0% |
| !! | CACTTCTAGCTTACCTGCTT+TGG | - | chr5.4:36619546-36619565 | MS.gene029630:intron | 45.0% |
| !! | CTGATGGATTTCCTGCTGTT+TGG | + | chr5.4:36622852-36622871 | None:intergenic | 45.0% |
| !! | GAATCTTCTAGGACTGTTCG+TGG | - | chr5.4:36619241-36619260 | MS.gene029630:CDS | 45.0% |
| !! | TCTCTCAAGTTGGTCCTCAA+GGG | - | chr5.4:36621197-36621216 | MS.gene029630:intron | 45.0% |
| !! | TTCTAGGACTGTTCGTGGTT+CGG | - | chr5.4:36619246-36619265 | MS.gene029630:CDS | 45.0% |
| !! | TTTATATCTAAAAAAATAAA+GGG | + | chr5.4:36622202-36622221 | None:intergenic | 5.0% |
| !!! | TTTTATATCTAAAAAAATAA+AGG | + | chr5.4:36622203-36622222 | None:intergenic | 5.0% |
| AGATAGCTCGTGTCCAAGTG+TGG | + | chr5.4:36622782-36622801 | None:intergenic | 50.0% | |
| CGTCGAACTCAGTTACCAGA+TGG | + | chr5.4:36620262-36620281 | None:intergenic | 50.0% | |
| CTAGAAGTTCCCTCCACACT+TGG | - | chr5.4:36622766-36622785 | MS.gene029630:CDS | 50.0% | |
| CTAGTTGAGGGCAGCAAACT+GGG | + | chr5.4:36622750-36622769 | None:intergenic | 50.0% | |
| CTGACAGAAGAGAGAGAGCA+TGG | + | chr5.4:36622807-36622826 | None:intergenic | 50.0% | |
| CTGGTAACTGAGTTCGACGA+TGG | - | chr5.4:36620263-36620282 | MS.gene029630:intron | 50.0% | |
| GACATCCGCACTCAAGATAG+AGG | - | chr5.4:36622895-36622914 | MS.gene029630:CDS | 50.0% | |
| TATCTTGAGTGCGGATGTCC+CGG | + | chr5.4:36622894-36622913 | None:intergenic | 50.0% | |
| TCAGACATCTAGCTGTGAGC+TGG | - | chr5.4:36619270-36619289 | MS.gene029630:CDS | 50.0% | |
| TCTAGTTGAGGGCAGCAAAC+TGG | + | chr5.4:36622751-36622770 | None:intergenic | 50.0% | |
| TGGCATATAGGAGCCAAAGC+AGG | + | chr5.4:36619562-36619581 | None:intergenic | 50.0% | |
| TTCGCGGAGCTTGTCATCAA+AGG | + | chr5.4:36622940-36622959 | None:intergenic | 50.0% | |
| ! | AGCAGGTAAGCTAGAAGTGC+GGG | + | chr5.4:36619545-36619564 | None:intergenic | 50.0% |
| ! | GTGGAGGGAACTTCTAGTTG+AGG | + | chr5.4:36622763-36622782 | None:intergenic | 50.0% |
| !! | TTTCCTGCTGTTTGGTGCGA+CGG | + | chr5.4:36622844-36622863 | None:intergenic | 50.0% |
| AAGGACCCCTGATGCAGTTC+TGG | - | chr5.4:36622449-36622468 | MS.gene029630:intron | 55.0% | |
| AATCCGTCGCACCAAACAGC+AGG | - | chr5.4:36622838-36622857 | MS.gene029630:CDS | 55.0% | |
| AGCTCGTGTCCAAGTGTGGA+GGG | + | chr5.4:36622778-36622797 | None:intergenic | 55.0% | |
| ATGGTAAGCGCAGTTGTCGC+AGG | - | chr5.4:36620282-36620301 | MS.gene029630:intron | 55.0% | |
| GGTCGCCTCTATCTTGAGTG+CGG | + | chr5.4:36622903-36622922 | None:intergenic | 55.0% | |
| TAGCTCGTGTCCAAGTGTGG+AGG | + | chr5.4:36622779-36622798 | None:intergenic | 55.0% | |
| TGTGGTCCCAGGGAATGATG+TGG | - | chr5.4:36621613-36621632 | MS.gene029630:intron | 55.0% | |
| ! | GCTAGAAGTGCGGGATCTCT+TGG | + | chr5.4:36619536-36619555 | None:intergenic | 55.0% |
| !! | GGTTTTGTCAGCAGTGCAGC+AGG | - | chr5.4:36619695-36619714 | MS.gene029630:intron | 55.0% |
| AGTTGTCGCAGGCGTCTAGC+TGG | - | chr5.4:36620293-36620312 | MS.gene029630:intron | 60.0% | |
| !! | CTGGACACAATGAGCGCCGA+AGG | - | chr5.4:36620312-36620331 | MS.gene029630:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 36619037 | 36623140 | 36619037 | ID=MS.gene029630 |
| chr5.4 | mRNA | 36619037 | 36623140 | 36619037 | ID=MS.gene029630.t1;Parent=MS.gene029630 |
| chr5.4 | exon | 36622461 | 36623140 | 36622461 | ID=MS.gene029630.t1.exon1;Parent=MS.gene029630.t1 |
| chr5.4 | CDS | 36622461 | 36623140 | 36622461 | ID=cds.MS.gene029630.t1;Parent=MS.gene029630.t1 |
| chr5.4 | exon | 36621785 | 36621921 | 36621785 | ID=MS.gene029630.t1.exon2;Parent=MS.gene029630.t1 |
| chr5.4 | CDS | 36621785 | 36621921 | 36621785 | ID=cds.MS.gene029630.t1;Parent=MS.gene029630.t1 |
| chr5.4 | exon | 36619037 | 36619533 | 36619037 | ID=MS.gene029630.t1.exon3;Parent=MS.gene029630.t1 |
| chr5.4 | CDS | 36619037 | 36619533 | 36619037 | ID=cds.MS.gene029630.t1;Parent=MS.gene029630.t1 |
| Gene Sequence |
| Protein sequence |
