AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029652

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029652.t1 MTR_5g047620 90.338 828 45 4 1 823 1 798 0.0 1439
MS.gene029652.t1 MTR_0020s0100 70.990 717 155 8 95 805 22 691 0.0 997
MS.gene029652.t1 MTR_1g114150 71.726 672 162 10 167 831 409 1059 0.0 967
MS.gene029652.t1 MTR_1g069565 70.203 688 181 9 164 831 207 890 0.0 958
MS.gene029652.t1 MTR_1g114130 69.333 675 183 8 164 831 390 1047 0.0 937
MS.gene029652.t1 MTR_1g069565 63.087 745 194 11 164 831 207 947 0.0 896
MS.gene029652.t1 MTR_5g065200 65.714 665 184 9 169 825 209 837 0.0 843
MS.gene029652.t1 MTR_1g114070 63.338 671 208 9 167 829 291 931 0.0 819
MS.gene029652.t1 MTR_1g114150 68.659 552 145 10 167 711 409 939 0.0 754
MS.gene029652.t1 MTR_2g024270 47.103 673 280 19 161 820 208 817 2.30e-175 526
MS.gene029652.t1 MTR_4g132540 44.236 694 302 18 161 820 222 864 2.68e-171 518
MS.gene029652.t1 MTR_7g117445 42.717 714 326 20 183 820 218 924 7.73e-167 508
MS.gene029652.t1 MTR_7g117445 42.717 714 326 20 183 820 218 924 1.07e-166 508
MS.gene029652.t1 MTR_7g117445 42.717 714 326 20 183 820 218 924 2.10e-166 508
MS.gene029652.t1 MTR_2g024140 44.477 679 277 19 161 820 88 685 4.53e-159 480
MS.gene029652.t1 MTR_7g117445 41.221 655 302 20 183 761 218 865 2.51e-140 437
MS.gene029652.t1 MTR_1g083120 35.347 662 355 16 184 820 278 891 3.01e-113 367
MS.gene029652.t1 MTR_1g083120 35.347 662 355 16 184 820 295 908 4.87e-113 367
MS.gene029652.t1 MTR_2g011630 35.469 671 379 19 183 812 45 702 1.22e-103 336
MS.gene029652.t1 MTR_2g011630 35.469 671 379 19 183 812 77 734 3.24e-103 336
MS.gene029652.t1 MTR_2g011630 35.469 671 379 19 183 812 289 946 1.40e-101 337
MS.gene029652.t1 MTR_2g024240 53.035 313 105 6 477 785 114 388 3.47e-98 311
MS.gene029652.t1 MTR_1g083120 34.876 605 321 16 184 763 278 834 1.82e-96 320
MS.gene029652.t1 MTR_1g083120 34.876 605 321 16 184 763 278 834 2.68e-96 320
MS.gene029652.t1 MTR_1g008060 40.764 471 235 14 164 621 927 1366 2.05e-88 307
MS.gene029652.t1 MTR_1g008060 61.176 170 59 2 645 811 1521 1686 3.88e-56 211
MS.gene029652.t1 MTR_1g008060 40.764 471 235 14 164 621 918 1357 2.22e-88 307
MS.gene029652.t1 MTR_1g008060 61.176 170 59 2 645 811 1512 1677 4.05e-56 211
MS.gene029652.t1 MTR_4g091520 35.702 563 284 19 321 819 727 1275 1.07e-86 300
MS.gene029652.t1 MTR_4g091520 42.500 80 45 1 183 262 347 425 7.25e-13 73.2
MS.gene029652.t1 MTR_8g062940 45.455 341 140 9 127 464 68 365 3.95e-75 249
MS.gene029652.t1 MTR_4g091520 33.333 483 236 20 321 735 692 1156 1.56e-52 199
MS.gene029652.t1 MTR_4g091520 42.500 80 45 1 183 262 347 425 7.50e-13 73.2
MS.gene029652.t1 MTR_4g091520 33.333 483 236 20 321 735 657 1121 1.62e-52 199
MS.gene029652.t1 MTR_4g091520 42.500 80 45 1 183 262 347 425 8.44e-13 72.8
MS.gene029652.t1 MTR_4g091520 32.568 479 245 19 321 735 727 1191 1.66e-52 199
MS.gene029652.t1 MTR_4g091520 42.500 80 45 1 183 262 347 425 7.84e-13 73.2
MS.gene029652.t1 MTR_0295s0020 57.485 167 67 2 467 629 11 177 5.75e-52 179
MS.gene029652.t1 MTR_8g013920 60.819 171 46 3 502 669 40 192 1.32e-50 176
MS.gene029652.t1 MTR_8g465700 54.545 176 71 5 414 585 7 177 2.81e-48 172
MS.gene029652.t1 MTR_8g465720 73.864 88 22 1 676 763 53 139 7.89e-40 145
MS.gene029652.t1 MTR_3g080750 67.188 64 21 0 584 647 85 148 1.09e-19 87.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029652.t1 AT3G07610 45.379 725 308 15 157 828 210 899 0.0 581
MS.gene029652.t1 AT3G07610 43.952 744 313 16 157 828 210 921 0.0 562
MS.gene029652.t1 AT1G62310 48.418 632 276 15 182 804 288 878 0.0 557
MS.gene029652.t1 AT1G11950 46.986 647 287 16 182 821 272 869 0.0 548
MS.gene029652.t1 AT1G11950 46.986 647 287 16 182 821 272 869 0.0 548
MS.gene029652.t1 AT4G00990 43.201 706 327 19 167 819 144 828 3.40e-165 501
MS.gene029652.t1 AT1G11950 44.905 579 263 16 182 753 272 801 2.13e-147 454
MS.gene029652.t1 AT4G00990 42.073 656 306 19 167 769 144 778 2.32e-142 439
MS.gene029652.t1 AT4G00990 42.438 648 299 19 167 761 144 770 1.19e-141 437
MS.gene029652.t1 AT3G07610 40.650 492 224 10 157 591 210 690 4.65e-103 336
MS.gene029652.t1 AT1G09060 31.651 654 380 19 184 820 287 890 2.78e-84 289
MS.gene029652.t1 AT1G09060 31.651 654 380 19 184 820 287 890 2.78e-84 289
MS.gene029652.t1 AT1G09060 31.651 654 380 19 184 820 301 904 3.35e-84 289
MS.gene029652.t1 AT1G09060 31.651 654 380 19 184 820 301 904 3.35e-84 289
MS.gene029652.t1 AT4G21430 31.138 668 388 20 183 831 309 923 1.07e-73 259

Find 171 sgRNAs with CRISPR-Local

Find 384 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTGACTTTACCTGCTTTAA+AGG 0.105810 5.4:+37386843 None:intergenic
GAAAAGAACACCTTGTATTT+TGG 0.170255 5.4:+37389491 None:intergenic
TTCAGATATTCCTTCAATTT+AGG 0.222589 5.4:+37386903 None:intergenic
AAAGTGCATGATTTCTTTAC+TGG 0.224783 5.4:-37388006 MS.gene029652:CDS
GAATATCTGAAGAAGCATTT+TGG 0.234335 5.4:-37386891 MS.gene029652:CDS
ACCATGATCACCTTCATTAT+TGG 0.236171 5.4:+37388604 None:intergenic
CAGAGAAGAAGGAGGCTTTA+AGG 0.245987 5.4:-37390315 MS.gene029652:CDS
TCACCTTCATTATTGGCTTT+TGG 0.260652 5.4:+37388611 None:intergenic
AGATCTAATTGTCTTAAATA+TGG 0.261093 5.4:+37389543 None:intergenic
GGATCTGTATATTCTTTATA+TGG 0.267565 5.4:+37387862 None:intergenic
AGAACGTTGTTGACAATTAC+AGG 0.270674 5.4:+37388296 None:intergenic
CTTCGTCGTGGGGAGCTTCT+AGG 0.285523 5.4:-37388797 MS.gene029652:CDS
TGCCGCCCAGCCTGAGATTC+TGG 0.288771 5.4:-37388684 MS.gene029652:CDS
ATATTATCTTCCTTCTTAAC+AGG 0.299520 5.4:+37388449 None:intergenic
GGTCCCACGTGAACATTATC+AGG 0.309126 5.4:+37387805 None:intergenic
TCTGTGAAATAGTGATTTAC+TGG 0.328060 5.4:+37385720 None:intergenic
CATCAAGAAAATAGTTTAGA+TGG 0.330265 5.4:-37386960 MS.gene029652:CDS
AGGCAATTGATTGCTTAAAT+TGG 0.335529 5.4:-37388175 MS.gene029652:CDS
CTCGATATCTTCGAGATTAA+CGG 0.335966 5.4:+37388505 None:intergenic
AGTGATTTACTGGAAGTTTA+CGG 0.337301 5.4:+37385730 None:intergenic
TTTGGCTTCTATCTCCATTT+CGG 0.358618 5.4:+37389509 None:intergenic
CTATTTCACAGAGGACAAAT+TGG 0.360430 5.4:-37385709 MS.gene029652:CDS
ACCAACTCAGAAATGCAATT+TGG 0.365415 5.4:+37388554 None:intergenic
TTGATTAACTCAAACTCAAT+TGG 0.365985 5.4:+37388764 None:intergenic
AAGAGGCTTAAGGAGGAGTA+TGG 0.378678 5.4:-37386650 MS.gene029652:intron
ATTTCATCGGGAGCTTGGGC+GGG 0.382942 5.4:-37387761 MS.gene029652:CDS
TTCAATGGCACTGGAGAAAA+GGG 0.397011 5.4:-37388322 MS.gene029652:CDS
TTTCAATGGCACTGGAGAAA+AGG 0.401004 5.4:-37388323 MS.gene029652:CDS
TATGGATTTCATCGGGAGCT+TGG 0.403251 5.4:-37387766 MS.gene029652:CDS
TCTAGAACAAATGGCCGAAA+TGG 0.406642 5.4:-37389523 MS.gene029652:CDS
TTATTATTATTATCAGATAC+AGG 0.409855 5.4:+37389920 None:intergenic
TTCTTTACTGGGTACACAAA+TGG 0.410350 5.4:-37387994 MS.gene029652:CDS
AAGAAAATCGAGGTAGGAAA+AGG 0.412720 5.4:-37390114 MS.gene029652:CDS
CTAAAGATGAGTGTGCTTAC+TGG 0.415066 5.4:-37388996 MS.gene029652:intron
TTTCATCGGGAGCTTGGGCG+GGG 0.418730 5.4:-37387760 MS.gene029652:CDS
GTGCTCATCTGAAGCAATTA+CGG 0.419476 5.4:+37387046 None:intergenic
TCATGTTGCTAAAGTGGAAC+TGG 0.419614 5.4:-37387195 MS.gene029652:CDS
ATGGATTTCATCGGGAGCTT+GGG 0.419810 5.4:-37387765 MS.gene029652:CDS
GGAGCTACATGGTGATAATC+AGG 0.421783 5.4:-37387111 MS.gene029652:CDS
ATAGTTTAGATGGTGCTCTC+TGG 0.426008 5.4:-37386950 MS.gene029652:CDS
CTGATGAAATGCACGCCATA+TGG 0.429586 5.4:+37388235 None:intergenic
ATTCGAAAGTGAATTGTCAT+TGG 0.434915 5.4:+37388202 None:intergenic
CTGCATGGTGAGATAATAAT+CGG 0.438469 5.4:-37388725 MS.gene029652:CDS
GCCAATAATGAAGGTGATCA+TGG 0.438610 5.4:-37388605 MS.gene029652:CDS
AGGAGAAGAAGGAACCTAAT+GGG 0.439310 5.4:-37389955 MS.gene029652:CDS
AATGAGTAATGCAGAGAAGA+AGG 0.439727 5.4:-37390326 MS.gene029652:CDS
TTTGACCGTTCCAGAATCTC+AGG 0.440046 5.4:+37388674 None:intergenic
TTACCTTCAGATTTCTGACT+TGG 0.444429 5.4:+37386464 None:intergenic
CAATCATAAGAAGAGGCTTA+AGG 0.445426 5.4:-37386660 MS.gene029652:CDS
GAAACTTGATTGCATGCATA+AGG 0.448780 5.4:-37389855 MS.gene029652:intron
GGGGAGCTTCTAGGTGGTAC+TGG 0.450026 5.4:-37388788 MS.gene029652:CDS
AAGGAGAAGAAGGAACCTAA+TGG 0.451038 5.4:-37389956 MS.gene029652:CDS
CCTTCAGATTTCTGACTTGG+TGG 0.452597 5.4:+37386467 None:intergenic
GACAAAATCAAGTGCAACCT+TGG 0.456526 5.4:+37385797 None:intergenic
ACAATTAGATCTAGAACAAA+TGG 0.456569 5.4:-37389532 MS.gene029652:CDS
ACCGTTCCAGAATCTCAGGC+TGG 0.460836 5.4:+37388678 None:intergenic
GCCAAATTGCATTTCTGAGT+TGG 0.462250 5.4:-37388555 MS.gene029652:CDS
TAAGATAAAACGTCTGATCA+TGG 0.467077 5.4:+37386687 None:intergenic
AATATACAGATCCTTTCAAA+GGG 0.467547 5.4:-37387852 MS.gene029652:CDS
CAAGTACGTCTCGTTTAAGC+TGG 0.469121 5.4:-37388268 MS.gene029652:CDS
TATTGCTTATGGATTTCATC+GGG 0.476030 5.4:-37387773 MS.gene029652:CDS
ACTTGGTGGGCACAACCAGC+TGG 0.481226 5.4:+37386481 None:intergenic
TTTCTCAGATCAGCAGAAGA+AGG 0.482830 5.4:+37390256 None:intergenic
GCTGTAAAAGAGGAGGAAAA+TGG 0.484521 5.4:-37389992 MS.gene029652:CDS
AATGCACGCCATATGGCAAT+TGG 0.487313 5.4:+37388242 None:intergenic
GCTTGATGTGGTAGAAAAGT+TGG 0.489208 5.4:-37384818 MS.gene029652:CDS
GTCGCAAGGATAAGCTTGAT+TGG 0.494914 5.4:-37387972 MS.gene029652:CDS
TTGTTTGAAGCCTGTTAAGA+AGG 0.498085 5.4:-37388459 MS.gene029652:CDS
CTTCAGATTTCTGACTTGGT+GGG 0.500244 5.4:+37386468 None:intergenic
TGATTGCTTAAATTGGTGCC+AGG 0.502959 5.4:-37388168 MS.gene029652:intron
TACGGATTTCCTCTGTCAAA+CGG 0.506035 5.4:+37385748 None:intergenic
TAGTTTAGATGGTGCTCTCT+GGG 0.506234 5.4:-37386949 MS.gene029652:CDS
CTATTGTTCTCCTTTAAAGC+AGG 0.506371 5.4:-37386853 MS.gene029652:intron
AGCTATTGAAATTGAATGAT+CGG 0.510634 5.4:-37387945 MS.gene029652:CDS
GATTTCATCGGGAGCTTGGG+CGG 0.513371 5.4:-37387762 MS.gene029652:CDS
GTTGACTCATGTTGCTAAAG+TGG 0.514296 5.4:-37387201 MS.gene029652:CDS
GCTCCCTCTTGTCTTGCTCA+AGG 0.519343 5.4:+37387129 None:intergenic
AAGGTATTCTAGCATATACT+TGG 0.523983 5.4:+37389569 None:intergenic
TAGTTCTGAAGCTGTAAAAG+AGG 0.524173 5.4:-37390002 MS.gene029652:CDS
GAATATACAGATCCTTTCAA+AGG 0.524887 5.4:-37387853 MS.gene029652:CDS
ATTGTCTTAAATATGGAAGA+AGG 0.525989 5.4:+37389550 None:intergenic
TGTATATTCTTTATATGGCA+AGG 0.530614 5.4:+37387867 None:intergenic
TTATGTAGATCAATAGCCTT+AGG 0.531000 5.4:+37388368 None:intergenic
ATATTGCTTATGGATTTCAT+CGG 0.531551 5.4:-37387774 MS.gene029652:CDS
GCTGGGAACCAATTGCCATA+TGG 0.533689 5.4:-37388250 MS.gene029652:CDS
TTTGTCTCTCCTGAAAATGT+TGG 0.534278 5.4:-37385780 MS.gene029652:CDS
AGAGGATGTACCTAAATTGA+AGG 0.534405 5.4:-37386913 MS.gene029652:CDS
GGTAGTCAAATATCGAGGTC+TGG 0.539728 5.4:+37388873 None:intergenic
GATCTGTAGGAATTGAGCCT+TGG 0.543618 5.4:-37386540 MS.gene029652:intron
ATAAAACGTCTGATCATGGA+TGG 0.544900 5.4:+37386691 None:intergenic
AACTCAGAAATGCAATTTGG+CGG 0.544926 5.4:+37388557 None:intergenic
AGAAGAAAGAAAATCGAGGT+AGG 0.546704 5.4:-37390120 MS.gene029652:CDS
AGAAGAAAGAAAATCGTGGT+AGG 0.547967 5.4:-37390042 MS.gene029652:CDS
GCACAATAGTGTTCGAGTCA+TGG 0.549629 5.4:-37387027 MS.gene029652:CDS
ATGGAGAGACCAATGTTGAC+AGG 0.554177 5.4:-37387088 MS.gene029652:CDS
CGAGTCATGGAAAATGAAAG+TGG 0.554587 5.4:-37387014 MS.gene029652:CDS
TGGATTATGTGATGCGAAGG+TGG 0.558113 5.4:-37386994 MS.gene029652:CDS
AGGTTAAGATCCCCTTTGAA+AGG 0.567445 5.4:+37387841 None:intergenic
TGTCCAAAAGCCAATAATGA+AGG 0.567765 5.4:-37388614 MS.gene029652:CDS
CAATTCACTTTCGAATGTGA+AGG 0.569546 5.4:-37388195 MS.gene029652:CDS
GCACCTTGAGCAAGACAAGA+GGG 0.570458 5.4:-37387132 MS.gene029652:CDS
TTACTAACAATCATAAGAAG+AGG 0.571805 5.4:-37386667 MS.gene029652:CDS
GTAACATTCGTCTCAGCTCA+AGG 0.572483 5.4:+37388579 None:intergenic
GTTGCTATGAGCTTCGTCGT+GGG 0.576036 5.4:-37388808 MS.gene029652:CDS
CCGTTCCAGAATCTCAGGCT+GGG 0.577409 5.4:+37388679 None:intergenic
TATCAGGCAGCTTCGCAGCA+AGG 0.578966 5.4:+37387821 None:intergenic
AAGTGCATGATTTCTTTACT+GGG 0.579389 5.4:-37388005 MS.gene029652:CDS
GATAATATACTGAATAACAC+AGG 0.580018 5.4:-37388434 MS.gene029652:CDS
ATTATCAAGCCTGTCAACAT+TGG 0.582130 5.4:+37387079 None:intergenic
GAGTGGCATGTAGGCAGTGA+TGG 0.586420 5.4:-37388647 MS.gene029652:CDS
CCGTTCAATTTACAGGTCTG+AGG 0.586479 5.4:-37384104 MS.gene029652:intron
GAGATAGAAGCCAAAATACA+AGG 0.589698 5.4:-37389501 MS.gene029652:intron
AAGAAGAAGAAAGAAAATCG+TGG 0.591308 5.4:-37390046 MS.gene029652:CDS
TTTCACAGAGGACAAATTGG+AGG 0.591359 5.4:-37385706 MS.gene029652:intron
CAAGACAAGAGGGAGCTACA+TGG 0.591607 5.4:-37387122 MS.gene029652:CDS
TCAAAATCTGAGTGGCATGT+AGG 0.592624 5.4:-37388656 MS.gene029652:CDS
TTCTGAAGCTGTAAAAGAGG+AGG 0.597856 5.4:-37389999 MS.gene029652:CDS
TAGAAAAGTTGGAGAATGCA+AGG 0.598312 5.4:-37384807 MS.gene029652:intron
CGAGGGGAAGATTATCTGCA+TGG 0.602428 5.4:-37388740 MS.gene029652:CDS
GTGAAGAAGAAAGAAAATCG+AGG 0.605425 5.4:-37390124 MS.gene029652:CDS
TTGCTATGAGCTTCGTCGTG+GGG 0.607792 5.4:-37388807 MS.gene029652:CDS
GATGGAAACTGAAACAGCGC+AGG 0.608691 5.4:-37390206 MS.gene029652:CDS
TGTTGCTATGAGCTTCGTCG+TGG 0.611387 5.4:-37388809 MS.gene029652:CDS
TCATTCAATTTCAATAGCTG+AGG 0.611928 5.4:+37387949 None:intergenic
AGCTTCTGAACAAAACTCCA+AGG 0.613881 5.4:+37386523 None:intergenic
CATGCAGATAATCTTCCCCT+CGG 0.616515 5.4:+37388741 None:intergenic
AGCACCTTGAGCAAGACAAG+AGG 0.618569 5.4:-37387133 MS.gene029652:CDS
AGGATATGAACTCGGTACAA+TGG 0.619500 5.4:+37387890 None:intergenic
GAGTTTGAGTTAATCAACCG+AGG 0.619684 5.4:-37388758 MS.gene029652:CDS
GAGTAATGCAGAGAAGAAGG+AGG 0.621102 5.4:-37390323 MS.gene029652:CDS
AGTTTGAGTTAATCAACCGA+GGG 0.622038 5.4:-37388757 MS.gene029652:CDS
TGTAAATAAGAGTAAAGTGG+TGG 0.623580 5.4:-37390155 MS.gene029652:CDS
GAAGCAATTACGGAAGAAGA+CGG 0.626484 5.4:+37387056 None:intergenic
TAAAACGTCTGATCATGGAT+GGG 0.626621 5.4:+37386692 None:intergenic
AAGTACGTCTCGTTTAAGCT+GGG 0.631416 5.4:-37388267 MS.gene029652:CDS
TGGGTACACAAATGGTCGCA+AGG 0.631643 5.4:-37387986 MS.gene029652:CDS
TGCTGTAAATAAGAGTAAAG+TGG 0.634537 5.4:-37390158 MS.gene029652:CDS
TCATAAGAAGAGGCTTAAGG+AGG 0.634907 5.4:-37386657 MS.gene029652:CDS
CTACATGGTGATAATCAGGA+TGG 0.636072 5.4:-37387107 MS.gene029652:CDS
TGATCTACATAATCACGAGA+AGG 0.638587 5.4:-37388357 MS.gene029652:CDS
CCACCAAGTCAGAAATCTGA+AGG 0.640431 5.4:-37386467 MS.gene029652:intron
TAAAGTGGAACTGGAAACTG+TGG 0.647185 5.4:-37387186 MS.gene029652:CDS
TATACTGAATAACACAGGGA+AGG 0.649723 5.4:-37388429 MS.gene029652:CDS
GATACATTACAAAGGAACAT+CGG 0.651806 5.4:+37384078 None:intergenic
CCCAGCCTGAGATTCTGGAA+CGG 0.653382 5.4:-37388679 MS.gene029652:CDS
TTCCAGAATCTCAGGCTGGG+CGG 0.655812 5.4:+37388682 None:intergenic
GCTGCCTGATAATGTTCACG+TGG 0.659270 5.4:-37387809 MS.gene029652:CDS
CATAGCAACAGCGAAGACAA+AGG 0.659485 5.4:+37388822 None:intergenic
ATGAACTCGGTACAATGGCG+AGG 0.661487 5.4:+37387895 None:intergenic
CGTCGTGGGGAGCTTCTAGG+TGG 0.662823 5.4:-37388794 MS.gene029652:CDS
TGAGTGCTTCCGTTTGACAG+AGG 0.667021 5.4:-37385757 MS.gene029652:CDS
CGTTAATCTCGAAGATATCG+AGG 0.667337 5.4:-37388504 MS.gene029652:CDS
GTAAAAGAGGAGGAAAATGG+TGG 0.672369 5.4:-37389989 MS.gene029652:CDS
AAGTGGATTATGTGATGCGA+AGG 0.674316 5.4:-37386997 MS.gene029652:CDS
ACTGAATAACACAGGGAAGG+CGG 0.678953 5.4:-37388426 MS.gene029652:CDS
TGGCAAGGAGGATATGAACT+CGG 0.679134 5.4:+37387882 None:intergenic
CTCTCACAGATACATTACAA+AGG 0.679764 5.4:+37384070 None:intergenic
TGTGTTGCAGTCATGCACCA+AGG 0.682853 5.4:-37385814 MS.gene029652:intron
TCAATGGCACTGGAGAAAAG+GGG 0.683003 5.4:-37388321 MS.gene029652:CDS
TATACATGCTATGCTTGATG+TGG 0.693903 5.4:-37384830 MS.gene029652:CDS
TCTGTGGTAGTCAAATATCG+AGG 0.709923 5.4:+37388868 None:intergenic
CTGCCTGATAATGTTCACGT+GGG 0.716258 5.4:-37387808 MS.gene029652:CDS
ATATTCTTTATATGGCAAGG+AGG 0.725924 5.4:+37387870 None:intergenic
AAAGTGGAACTGGAAACTGT+GGG 0.730360 5.4:-37387185 MS.gene029652:CDS
ATAATATACTGAATAACACA+GGG 0.733267 5.4:-37388433 MS.gene029652:CDS
TGGAACGGTCAAAATCTGAG+TGG 0.746210 5.4:-37388664 MS.gene029652:CDS
ATATACAGATCCTTTCAAAG+GGG 0.749721 5.4:-37387851 MS.gene029652:CDS
AGTAAATCACTATTTCACAG+AGG 0.750431 5.4:-37385718 MS.gene029652:CDS
GCTGATCTGAGAAAGAAACG+TGG 0.761952 5.4:-37390247 MS.gene029652:CDS
GTTTGAGTTAATCAACCGAG+GGG 0.766582 5.4:-37388756 MS.gene029652:CDS
CTACATCAGACATATCACAG+TGG 0.829336 5.4:+37387719 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAATAATAATAATAA+AGG - chr5.4:37384501-37384520 MS.gene029652:intron 0.0%
!! AATAATAATAATAATAAAGG+AGG - chr5.4:37384504-37384523 MS.gene029652:intron 10.0%
!! ATAAAAATTTAGAAATTACA+AGG + chr5.4:37386353-37386372 None:intergenic 10.0%
!!! AAATTTTTCTCAAATAAATA+AGG + chr5.4:37386493-37386512 None:intergenic 10.0%
!!! TATATTTTTTAAATTGCTAT+TGG - chr5.4:37385331-37385350 MS.gene029652:intron 10.0%
!! AAACCTATTAAAATTAAGTA+AGG + chr5.4:37389719-37389738 None:intergenic 15.0%
!! AACTTAACACATAATAAAAA+AGG + chr5.4:37385259-37385278 None:intergenic 15.0%
!! AAGATAAAATTAACAAAATC+TGG - chr5.4:37389939-37389958 MS.gene029652:CDS 15.0%
!! AATTAAACAAATTTGAATTG+AGG - chr5.4:37390065-37390084 MS.gene029652:CDS 15.0%
!! AATTACAAAAGAAAAATGAA+TGG - chr5.4:37389095-37389114 MS.gene029652:intron 15.0%
!! AATTATCAAAGAAAAAAACA+CGG + chr5.4:37387169-37387188 None:intergenic 15.0%
!! ACTTAACACATAATAAAAAA+GGG + chr5.4:37385258-37385277 None:intergenic 15.0%
!! AGAACTATTAAAATTAAGTA+AGG - chr5.4:37390130-37390149 MS.gene029652:CDS 15.0%
!! ATTTGTAAAAAATTGTATGT+AGG + chr5.4:37388472-37388491 None:intergenic 15.0%
!! TTATTATTATTATCAGATAC+AGG + chr5.4:37384492-37384511 None:intergenic 15.0%
!!! AGAAGTAATTTTTTTTTGTA+GGG + chr5.4:37389748-37389767 None:intergenic 15.0%
!!! TAGAAGTAATTTTTTTTTGT+AGG + chr5.4:37389749-37389768 None:intergenic 15.0%
!!! TATTTTATTTTAGTTTCTCT+AGG - chr5.4:37390257-37390276 MS.gene029652:CDS 15.0%
!!! TGTTTTTTTCTTTGATAATT+TGG - chr5.4:37387169-37387188 MS.gene029652:CDS 15.0%
!! AATAGTTAGTTATATGATGT+TGG + chr5.4:37388073-37388092 None:intergenic 20.0%
!! ACTCATATTATTCATTGAAA+TGG - chr5.4:37388965-37388984 MS.gene029652:intron 20.0%
!! AGATCTAATTGTCTTAAATA+TGG + chr5.4:37384869-37384888 None:intergenic 20.0%
!! ATAATATACTGAATAACACA+GGG - chr5.4:37385976-37385995 MS.gene029652:intron 20.0%
!! ATGTTGAATTGTTAACAAAA+TGG + chr5.4:37387848-37387867 None:intergenic 20.0%
!! ATTACAAAAGAAAATACGAT+CGG - chr5.4:37389332-37389351 MS.gene029652:intron 20.0%
!! GACATTAATAAGAAAAAACA+AGG + chr5.4:37384951-37384970 None:intergenic 20.0%
!! GGTAAAATAAGTTTAATTCA+AGG + chr5.4:37389013-37389032 None:intergenic 20.0%
!! TAATCAAATTCTGTTATTCA+TGG - chr5.4:37384702-37384721 MS.gene029652:intron 20.0%
!! TTACATTACAATTACAAAAG+TGG + chr5.4:37389071-37389090 None:intergenic 20.0%
!!! AGTCCTTACTTAATTTTAAT+AGG - chr5.4:37389713-37389732 MS.gene029652:intron 20.0%
!!! ATTTGTTTTATCGTTAATGA+AGG - chr5.4:37387986-37388005 MS.gene029652:CDS 20.0%
!!! CAAGTTTAGAATACTATAAA+AGG - chr5.4:37389843-37389862 MS.gene029652:intron 20.0%
!!! TAGAAATTCCCAATTTTATA+GGG + chr5.4:37389688-37389707 None:intergenic 20.0%
!!! TATAATTTTTGTACACTGTT+TGG - chr5.4:37387793-37387812 MS.gene029652:CDS 20.0%
!!! TATAGGGTTAAATATGTTTT+TGG - chr5.4:37389661-37389680 MS.gene029652:intron 20.0%
!!! TTAGAAATTCCCAATTTTAT+AGG + chr5.4:37389689-37389708 None:intergenic 20.0%
!!! TTATTTTGTGTAATTTACCT+TGG - chr5.4:37386917-37386936 MS.gene029652:CDS 20.0%
!!! TTCTTTGAAAAGTCATTAAT+TGG - chr5.4:37389418-37389437 MS.gene029652:intron 20.0%
!!! TTTTATTCTCTACTTTAATG+TGG - chr5.4:37388797-37388816 MS.gene029652:CDS 20.0%
!!! TTTTTCTCAAATAAATAAGG+AGG + chr5.4:37386490-37386509 None:intergenic 20.0%
! AAACAAATTTGAATTGAGGA+GGG - chr5.4:37390069-37390088 MS.gene029652:CDS 25.0%
! AAGTAAGGACTAAACTTAAA+AGG - chr5.4:37390145-37390164 MS.gene029652:CDS 25.0%
! AATATACAGATCCTTTCAAA+GGG - chr5.4:37386557-37386576 MS.gene029652:intron 25.0%
! AGCTATTGAAATTGAATGAT+CGG - chr5.4:37386464-37386483 MS.gene029652:intron 25.0%
! ATATTATCTTCCTTCTTAAC+AGG + chr5.4:37385963-37385982 None:intergenic 25.0%
! ATATTGCTTATGGATTTCAT+CGG - chr5.4:37386635-37386654 MS.gene029652:intron 25.0%
! ATTGTCTTAAATATGGAAGA+AGG + chr5.4:37384862-37384881 None:intergenic 25.0%
! CATCAAATAAATTGTCTTTC+CGG - chr5.4:37387065-37387084 MS.gene029652:CDS 25.0%
! CATCAAGAAAATAGTTTAGA+TGG - chr5.4:37387449-37387468 MS.gene029652:intron 25.0%
! CCAAAAACATATATTGCTTA+TGG - chr5.4:37386625-37386644 MS.gene029652:intron 25.0%
! GAAGTATAAATCTATTACGA+CGG + chr5.4:37388110-37388129 None:intergenic 25.0%
! GATAATATACTGAATAACAC+AGG - chr5.4:37385975-37385994 MS.gene029652:intron 25.0%
! GGAAAGACAATTTATTTGAT+GGG + chr5.4:37387066-37387085 None:intergenic 25.0%
! GGATCTGTATATTCTTTATA+TGG + chr5.4:37386550-37386569 None:intergenic 25.0%
! TAAACAAATTTGAATTGAGG+AGG - chr5.4:37390068-37390087 MS.gene029652:CDS 25.0%
! TAACTAAGAAAACCAAAACA+TGG + chr5.4:37385456-37385475 None:intergenic 25.0%
! TAAGAAAAAACAAGGATTGA+AGG + chr5.4:37384943-37384962 None:intergenic 25.0%
! TCATGTCAATAGATTCTTAT+TGG - chr5.4:37389494-37389513 MS.gene029652:intron 25.0%
! TGTATATTCTTTATATGGCA+AGG + chr5.4:37386545-37386564 None:intergenic 25.0%
! TTACTAACAATCATAAGAAG+AGG - chr5.4:37387742-37387761 MS.gene029652:CDS 25.0%
! TTCAGATATTCCTTCAATTT+AGG + chr5.4:37387509-37387528 None:intergenic 25.0%
! TTCTCTTTATTAACCATAGA+AGG + chr5.4:37388022-37388041 None:intergenic 25.0%
! TTGATTAACTCAAACTCAAT+TGG + chr5.4:37385648-37385667 None:intergenic 25.0%
! TTGTTATGTGTTAAGTTTGA+GGG - chr5.4:37385061-37385080 MS.gene029652:intron 25.0%
!! AAACAAACTTTGTTGTAACA+GGG + chr5.4:37389780-37389799 None:intergenic 25.0%
!! AAACTTTTTATACTGTCCTA+AGG - chr5.4:37386025-37386044 MS.gene029652:intron 25.0%
!! AATGGTTCTGTATATTTAGT+AGG - chr5.4:37389371-37389390 MS.gene029652:intron 25.0%
!! ACAATTAGATCTAGAACAAA+TGG - chr5.4:37384877-37384896 MS.gene029652:intron 25.0%
!! ACAGTATAAAAAGTTTTCAC+TGG + chr5.4:37386021-37386040 None:intergenic 25.0%
!! ACTTATACTTTACCATGTTT+TGG - chr5.4:37385441-37385460 MS.gene029652:intron 25.0%
!! CCATAAGCAATATATGTTTT+TGG + chr5.4:37386628-37386647 None:intergenic 25.0%
!! TAAAAGGTCCCAATTTTATA+GGG - chr5.4:37390161-37390180 MS.gene029652:CDS 25.0%
!! TAAACAAACTTTGTTGTAAC+AGG + chr5.4:37389781-37389800 None:intergenic 25.0%
!! TGATATCTTAGTACTTTTGT+TGG - chr5.4:37388336-37388355 MS.gene029652:CDS 25.0%
!! TTAAAAGGTCCCAATTTTAT+AGG - chr5.4:37390160-37390179 MS.gene029652:CDS 25.0%
!! TTTTCAGTCCCTATAAAATT+GGG + chr5.4:37390172-37390191 None:intergenic 25.0%
!!! AGGATTTAAGACATTTTCAA+TGG - chr5.4:37386072-37386091 MS.gene029652:intron 25.0%
!!! CAATTTTTTACAAATTACCC+TGG - chr5.4:37388477-37388496 MS.gene029652:CDS 25.0%
!!! CTTTGATAATTTGGCTTTTT+AGG - chr5.4:37387178-37387197 MS.gene029652:CDS 25.0%
!!! GAGTGCAGAAATTTTTTATA+GGG - chr5.4:37390101-37390120 MS.gene029652:CDS 25.0%
!!! TGAGTGCAGAAATTTTTTAT+AGG - chr5.4:37390100-37390119 MS.gene029652:CDS 25.0%
!!! TTCATAGAAGTTTTAGAATC+CGG - chr5.4:37388827-37388846 MS.gene029652:CDS 25.0%
!!! TTTTTGGTCCCTATAAAATT+GGG - chr5.4:37389677-37389696 MS.gene029652:intron 25.0%
AAAAGAAAATACGATCGGAA+TGG - chr5.4:37389337-37389356 MS.gene029652:intron 30.0%
AAAGAAAATACGATCGGAAT+GGG - chr5.4:37389338-37389357 MS.gene029652:intron 30.0%
AAAGTGCATGATTTCTTTAC+TGG - chr5.4:37386403-37386422 MS.gene029652:intron 30.0%
AACAAAATGGTACAACTGTA+TGG + chr5.4:37387835-37387854 None:intergenic 30.0%
AACCCTATATTCAATAACCT+TGG + chr5.4:37389650-37389669 None:intergenic 30.0%
AACTAAGAATGATCTCCTAT+TGG + chr5.4:37385304-37385323 None:intergenic 30.0%
AAGAAGAAGAAAGAAAATCG+TGG - chr5.4:37384363-37384382 MS.gene029652:intron 30.0%
AAGTGAACATGGTATATTCA+AGG + chr5.4:37390205-37390224 None:intergenic 30.0%
AAGTGCATGATTTCTTTACT+GGG - chr5.4:37386404-37386423 MS.gene029652:intron 30.0%
AATCTATTGACATGACATGA+TGG + chr5.4:37389489-37389508 None:intergenic 30.0%
ACAATTCAACATTGATCTGT+AGG - chr5.4:37387856-37387875 MS.gene029652:CDS 30.0%
ACCCTATATTCAATAACCTT+GGG + chr5.4:37389649-37389668 None:intergenic 30.0%
ACTACTACAAATTGATATCC+TGG - chr5.4:37385002-37385021 MS.gene029652:intron 30.0%
AGCACAAACAAGAATTAATC+CGG + chr5.4:37387087-37387106 None:intergenic 30.0%
AGGCAATTGATTGCTTAAAT+TGG - chr5.4:37386234-37386253 MS.gene029652:intron 30.0%
AGTAAATCACTATTTCACAG+AGG - chr5.4:37388691-37388710 MS.gene029652:CDS 30.0%
AGTGAACATGGTATATTCAA+GGG + chr5.4:37390204-37390223 None:intergenic 30.0%
AGTGATTTACTGGAAGTTTA+CGG + chr5.4:37388682-37388701 None:intergenic 30.0%
ATACTTAAGGCCATATCATT+TGG - chr5.4:37388251-37388270 MS.gene029652:CDS 30.0%
ATATACAGATCCTTTCAAAG+GGG - chr5.4:37386558-37386577 MS.gene029652:intron 30.0%
ATATTCTTTATATGGCAAGG+AGG + chr5.4:37386542-37386561 None:intergenic 30.0%
ATCTAGATGTCCAAATGATA+TGG + chr5.4:37388264-37388283 None:intergenic 30.0%
ATTAAGAAATCGAACTAACC+TGG + chr5.4:37386262-37386281 None:intergenic 30.0%
ATTCGAAAGTGAATTGTCAT+TGG + chr5.4:37386210-37386229 None:intergenic 30.0%
CAATAAAAATAGTGCATACC+AGG + chr5.4:37385023-37385042 None:intergenic 30.0%
CAGAAAGAAAAAAGTGAAGA+TGG - chr5.4:37384185-37384204 MS.gene029652:intron 30.0%
CGGAAAGACAATTTATTTGA+TGG + chr5.4:37387067-37387086 None:intergenic 30.0%
CTATTGGAATGATCATTACA+GGG - chr5.4:37385347-37385366 MS.gene029652:intron 30.0%
GAATATACAGATCCTTTCAA+AGG - chr5.4:37386556-37386575 MS.gene029652:intron 30.0%
GAGAAAACAAGAGAAAATGA+AGG + chr5.4:37387630-37387649 None:intergenic 30.0%
GAGAAAATGAAGGAAAATGT+TGG + chr5.4:37387620-37387639 None:intergenic 30.0%
GGAATGATCAAATGGAAATA+TGG + chr5.4:37388132-37388151 None:intergenic 30.0%
GGAATGGGAAAAATGAAAAA+TGG - chr5.4:37389353-37389372 MS.gene029652:intron 30.0%
TAAGATAAAACGTCTGATCA+TGG + chr5.4:37387725-37387744 None:intergenic 30.0%
TAGAAATTACAAGGAACAGA+TGG + chr5.4:37386344-37386363 None:intergenic 30.0%
TATCAATTACCAAAACACCA+AGG + chr5.4:37386937-37386956 None:intergenic 30.0%
TATTGCTTATGGATTTCATC+GGG - chr5.4:37386636-37386655 MS.gene029652:intron 30.0%
TATTTGCGTAGCATATTGAA+AGG - chr5.4:37386791-37386810 MS.gene029652:intron 30.0%
TCATTCAATTTCAATAGCTG+AGG + chr5.4:37386463-37386482 None:intergenic 30.0%
TCTGTGAAATAGTGATTTAC+TGG + chr5.4:37388692-37388711 None:intergenic 30.0%
TGAATAACCTACATTACCAA+TGG + chr5.4:37387696-37387715 None:intergenic 30.0%
TGCTGTAAATAAGAGTAAAG+TGG - chr5.4:37384251-37384270 MS.gene029652:intron 30.0%
TGTAAATAAGAGTAAAGTGG+TGG - chr5.4:37384254-37384273 MS.gene029652:intron 30.0%
TGTTATGTGTTAAGTTTGAG+GGG - chr5.4:37385062-37385081 MS.gene029652:intron 30.0%
TTATGTAGATCAATAGCCTT+AGG + chr5.4:37386044-37386063 None:intergenic 30.0%
TTTCAACCAATGTAAGTGTT+CGG + chr5.4:37388939-37388958 None:intergenic 30.0%
! AACACTTACATTGGTTGAAA+TGG - chr5.4:37388939-37388958 MS.gene029652:intron 30.0%
! AAGGTATTCTAGCATATACT+TGG + chr5.4:37384843-37384862 None:intergenic 30.0%
! CTTGTTATGTGTTAAGTTTG+AGG - chr5.4:37385060-37385079 MS.gene029652:intron 30.0%
! GAAAAGAACACCTTGTATTT+TGG + chr5.4:37384921-37384940 None:intergenic 30.0%
! GTTTTCAGTCCCTATAAAAT+TGG + chr5.4:37390173-37390192 None:intergenic 30.0%
! TAATCATTTTCTTCACCTGT+TGG + chr5.4:37389561-37389580 None:intergenic 30.0%
! TCGTTTTGTGTATTTGAGTA+AGG + chr5.4:37388216-37388235 None:intergenic 30.0%
!!! GAATATCTGAAGAAGCATTT+TGG - chr5.4:37387518-37387537 MS.gene029652:intron 30.0%
!!! GTTTTTGGTCCCTATAAAAT+TGG - chr5.4:37389676-37389695 MS.gene029652:intron 30.0%
!!! TCATAGAAGTTTTAGAATCC+GGG - chr5.4:37388828-37388847 MS.gene029652:CDS 30.0%
!!! TGTAATTTACCTTGGTGTTT+TGG - chr5.4:37386925-37386944 MS.gene029652:CDS 30.0%
!!! TTTTCTGATTGCTGCTTTTT+TGG - chr5.4:37389532-37389551 MS.gene029652:CDS 30.0%
AACTCAGAAATGCAATTTGG+CGG + chr5.4:37385855-37385874 None:intergenic 35.0%
AAGAAAATCGAGGTAGGAAA+AGG - chr5.4:37384295-37384314 MS.gene029652:intron 35.0%
AATTGAACGGTAGGCAAAAT+CGG + chr5.4:37390295-37390314 None:intergenic 35.0%
ACAAAAAAGTGATGAGCTAG+TGG + chr5.4:37388510-37388529 None:intergenic 35.0%
ACCAACTCAGAAATGCAATT+TGG + chr5.4:37385858-37385877 None:intergenic 35.0%
ACCATGATCACCTTCATTAT+TGG + chr5.4:37385808-37385827 None:intergenic 35.0%
AGAACGTTGTTGACAATTAC+AGG + chr5.4:37386116-37386135 None:intergenic 35.0%
AGAAGAAAGAAAATCGAGGT+AGG - chr5.4:37384289-37384308 MS.gene029652:intron 35.0%
AGAAGAAAGAAAATCGTGGT+AGG - chr5.4:37384367-37384386 MS.gene029652:intron 35.0%
AGAGGATGTACCTAAATTGA+AGG - chr5.4:37387496-37387515 MS.gene029652:intron 35.0%
AGCCTCTTGTGTAAAAAACA+GGG - chr5.4:37385153-37385172 MS.gene029652:intron 35.0%
AGTATCCAAAAAGAGTTGAC+AGG + chr5.4:37388406-37388425 None:intergenic 35.0%
ATAAAACGTCTGATCATGGA+TGG + chr5.4:37387721-37387740 None:intergenic 35.0%
ATATACCATGTTCACTTTGC+TGG - chr5.4:37390208-37390227 MS.gene029652:CDS 35.0%
ATTATCAAGCCTGTCAACAT+TGG + chr5.4:37387333-37387352 None:intergenic 35.0%
CAATCATAAGAAGAGGCTTA+AGG - chr5.4:37387749-37387768 MS.gene029652:CDS 35.0%
CAATTCACTTTCGAATGTGA+AGG - chr5.4:37386214-37386233 MS.gene029652:intron 35.0%
CATAATAAAAAAGGGCAACC+CGG + chr5.4:37385250-37385269 None:intergenic 35.0%
CATACAATACACCAAATGGT+GGG - chr5.4:37385184-37385203 MS.gene029652:intron 35.0%
CTATTTCACAGAGGACAAAT+TGG - chr5.4:37388700-37388719 MS.gene029652:CDS 35.0%
CTCGATATCTTCGAGATTAA+CGG + chr5.4:37385907-37385926 None:intergenic 35.0%
CTGCATGGTGAGATAATAAT+CGG - chr5.4:37385684-37385703 MS.gene029652:intron 35.0%
CTTCTTCTTCTTCTTCTCTT+TGG + chr5.4:37384352-37384371 None:intergenic 35.0%
CTTGTGTAAAAAACAGGGTA+AGG - chr5.4:37385158-37385177 MS.gene029652:intron 35.0%
GAAACTTGATTGCATGCATA+AGG - chr5.4:37384554-37384573 MS.gene029652:intron 35.0%
GAAGGTAAAACTTATGTGCA+TGG - chr5.4:37387960-37387979 MS.gene029652:CDS 35.0%
GAGATAGAAGCCAAAATACA+AGG - chr5.4:37384908-37384927 MS.gene029652:intron 35.0%
GCCCAAGGTTATTGAATATA+GGG - chr5.4:37389645-37389664 MS.gene029652:intron 35.0%
GCTATTGGAATGATCATTAC+AGG - chr5.4:37385346-37385365 MS.gene029652:intron 35.0%
GGTTAGTGATTGCATACTTA+AGG - chr5.4:37389623-37389642 MS.gene029652:intron 35.0%
GTGAAGAAGAAAGAAAATCG+AGG - chr5.4:37384285-37384304 MS.gene029652:intron 35.0%
GTTGACCTACCAAAACAATT+GGG - chr5.4:37388850-37388869 MS.gene029652:CDS 35.0%
TAAAACGTCTGATCATGGAT+GGG + chr5.4:37387720-37387739 None:intergenic 35.0%
TAAAGTTGTTGTCATGTGAC+TGG - chr5.4:37385103-37385122 MS.gene029652:intron 35.0%
TAACTCAATGGAGATAGGAT+AGG - chr5.4:37388310-37388329 MS.gene029652:CDS 35.0%
TAAGTGCATACTCTATCAAG+TGG - chr5.4:37387129-37387148 MS.gene029652:CDS 35.0%
TAGAAAAGTTGGAGAATGCA+AGG - chr5.4:37389602-37389621 MS.gene029652:CDS 35.0%
TATACATGCTATGCTTGATG+TGG - chr5.4:37389579-37389598 MS.gene029652:CDS 35.0%
TATACTGAATAACACAGGGA+AGG - chr5.4:37385980-37385999 MS.gene029652:intron 35.0%
TCTGACTTTACCTGCTTTAA+AGG + chr5.4:37387569-37387588 None:intergenic 35.0%
TGATCTACATAATCACGAGA+AGG - chr5.4:37386052-37386071 MS.gene029652:intron 35.0%
TGTCCAAAAGCCAATAATGA+AGG - chr5.4:37385795-37385814 MS.gene029652:CDS 35.0%
TGTTTCAATTCTGTCTTTCC+TGG - chr5.4:37386715-37386734 MS.gene029652:intron 35.0%
TTACCTTCAGATTTCTGACT+TGG + chr5.4:37387948-37387967 None:intergenic 35.0%
TTCTTTACTGGGTACACAAA+TGG - chr5.4:37386415-37386434 MS.gene029652:intron 35.0%
TTTGTCTCTCCTGAAAATGT+TGG - chr5.4:37388629-37388648 MS.gene029652:CDS 35.0%
! AGGTGTAAGTTTTCCTTCTA+TGG - chr5.4:37388006-37388025 MS.gene029652:CDS 35.0%
! AGTTTGAGTTAATCAACCGA+GGG - chr5.4:37385652-37385671 MS.gene029652:intron 35.0%
! ATTGGTAACTCAATGGAGAT+AGG - chr5.4:37388305-37388324 MS.gene029652:CDS 35.0%
! CATTCTAGAAAATACAGTCC+AGG + chr5.4:37386736-37386755 None:intergenic 35.0%
! CTTGAGAATTGGTAACTCAA+TGG - chr5.4:37388298-37388317 MS.gene029652:CDS 35.0%
! GGCATTTTTCTTTTCCCATT+AGG + chr5.4:37384471-37384490 None:intergenic 35.0%
! TAAGACATTTTCAATGGCAC+TGG - chr5.4:37386078-37386097 MS.gene029652:intron 35.0%
! TTGAAAGGTGCATAGTTTGA+AGG - chr5.4:37386806-37386825 MS.gene029652:intron 35.0%
! TTGTTTGAAGCCTGTTAAGA+AGG - chr5.4:37385950-37385969 MS.gene029652:intron 35.0%
! TTTGGCTTCTATCTCCATTT+CGG + chr5.4:37384903-37384922 None:intergenic 35.0%
! TTTTGTGAAGAAGGAGAAGA+AGG - chr5.4:37384443-37384462 MS.gene029652:intron 35.0%
! TTTTGTTGATGCATGTGCTT+TGG - chr5.4:37384631-37384650 MS.gene029652:intron 35.0%
!! CTATTGTTCTCCTTTAAAGC+AGG - chr5.4:37387556-37387575 MS.gene029652:intron 35.0%
!! GGTATGCTAGACTACTTTTA+TGG - chr5.4:37388724-37388743 MS.gene029652:CDS 35.0%
!! TAGTTCTGAAGCTGTAAAAG+AGG - chr5.4:37384407-37384426 MS.gene029652:intron 35.0%
!! TATGGCCTTAAGTATTGATG+TGG + chr5.4:37388246-37388265 None:intergenic 35.0%
!! TTGACTGTTGATTCAATGCA+GGG - chr5.4:37386373-37386392 MS.gene029652:intron 35.0%
!! TTTGACTGTTGATTCAATGC+AGG - chr5.4:37386372-37386391 MS.gene029652:intron 35.0%
!! TTTGTACACTGTTTGGTTTG+TGG - chr5.4:37387800-37387819 MS.gene029652:CDS 35.0%
!!! AAATGGTGGTTTTGTGAAGA+AGG - chr5.4:37384434-37384453 MS.gene029652:intron 35.0%
!!! TACCCTGTTTTTTACACAAG+AGG + chr5.4:37385158-37385177 None:intergenic 35.0%
!!! TCACCTTCATTATTGGCTTT+TGG + chr5.4:37385801-37385820 None:intergenic 35.0%
!!! TTTGCGACAATTTTTTGCAG+AGG - chr5.4:37389977-37389996 MS.gene029652:CDS 35.0%
AAAGTGGAACTGGAAACTGT+GGG - chr5.4:37387224-37387243 MS.gene029652:intron 40.0%
AAGGAGAAGAAGGAACCTAA+TGG - chr5.4:37384453-37384472 MS.gene029652:intron 40.0%
AAGTACGTCTCGTTTAAGCT+GGG - chr5.4:37386142-37386161 MS.gene029652:intron 40.0%
AGACCTGTAAATTGAACGGT+AGG + chr5.4:37390304-37390323 None:intergenic 40.0%
AGCTTCTGAACAAAACTCCA+AGG + chr5.4:37387889-37387908 None:intergenic 40.0%
AGGAGAAGAAGGAACCTAAT+GGG - chr5.4:37384454-37384473 MS.gene029652:intron 40.0%
AGGATATGAACTCGGTACAA+TGG + chr5.4:37386522-37386541 None:intergenic 40.0%
AGGTTAAGATCCCCTTTGAA+AGG + chr5.4:37386571-37386590 None:intergenic 40.0%
AGTATACTGAGCTTCCAATC+AGG + chr5.4:37388876-37388895 None:intergenic 40.0%
ATAGTTTAGATGGTGCTCTC+TGG - chr5.4:37387459-37387478 MS.gene029652:intron 40.0%
CAGCCTCTTGTGTAAAAAAC+AGG - chr5.4:37385152-37385171 MS.gene029652:intron 40.0%
CAGTATACTACACCTATCGT+TGG - chr5.4:37388887-37388906 MS.gene029652:intron 40.0%
CATCTCATGCATGATCCAAT+AGG - chr5.4:37385286-37385305 MS.gene029652:intron 40.0%
CCAAATCCGAACACTTACAT+TGG - chr5.4:37388930-37388949 MS.gene029652:intron 40.0%
CCAATGTAAGTGTTCGGATT+TGG + chr5.4:37388933-37388952 None:intergenic 40.0%
CCTCAGACCTGTAAATTGAA+CGG + chr5.4:37390308-37390327 None:intergenic 40.0%
CGAGTCATGGAAAATGAAAG+TGG - chr5.4:37387395-37387414 MS.gene029652:intron 40.0%
CGTTAATCTCGAAGATATCG+AGG - chr5.4:37385905-37385924 MS.gene029652:intron 40.0%
CTAAAGATGAGTGTGCTTAC+TGG - chr5.4:37385413-37385432 MS.gene029652:intron 40.0%
CTACATCAGACATATCACAG+TGG + chr5.4:37386693-37386712 None:intergenic 40.0%
CTACATGGTGATAATCAGGA+TGG - chr5.4:37387302-37387321 MS.gene029652:intron 40.0%
CTCACATGGGAATGATCAAA+TGG + chr5.4:37388140-37388159 None:intergenic 40.0%
GAAGCAATTACGGAAGAAGA+CGG + chr5.4:37387356-37387375 None:intergenic 40.0%
GACAAAATCAAGTGCAACCT+TGG + chr5.4:37388615-37388634 None:intergenic 40.0%
GAGTTGAATGACGTATCCAT+TGG - chr5.4:37387677-37387696 MS.gene029652:intron 40.0%
GCATACAATACACCAAATGG+TGG - chr5.4:37385183-37385202 MS.gene029652:intron 40.0%
GCCAAATTGCATTTCTGAGT+TGG - chr5.4:37385854-37385873 MS.gene029652:intron 40.0%
GCCAATAATGAAGGTGATCA+TGG - chr5.4:37385804-37385823 MS.gene029652:CDS 40.0%
GCTGCATACAATACACCAAA+TGG - chr5.4:37385180-37385199 MS.gene029652:intron 40.0%
GCTGTAAAAGAGGAGGAAAA+TGG - chr5.4:37384417-37384436 MS.gene029652:intron 40.0%
GCTTGATGTGGTAGAAAAGT+TGG - chr5.4:37389591-37389610 MS.gene029652:CDS 40.0%
GGCCCAAGGTTATTGAATAT+AGG - chr5.4:37389644-37389663 MS.gene029652:intron 40.0%
GGTAAAACTTATGTGCATGG+TGG - chr5.4:37387963-37387982 MS.gene029652:CDS 40.0%
GGTTGACCTACCAAAACAAT+TGG - chr5.4:37388849-37388868 MS.gene029652:CDS 40.0%
GTAAAAGAGGAGGAAAATGG+TGG - chr5.4:37384420-37384439 MS.gene029652:intron 40.0%
TAAAGTGGAACTGGAAACTG+TGG - chr5.4:37387223-37387242 MS.gene029652:intron 40.0%
TACGGATTTCCTCTGTCAAA+CGG + chr5.4:37388664-37388683 None:intergenic 40.0%
TAGTTTAGATGGTGCTCTCT+GGG - chr5.4:37387460-37387479 MS.gene029652:intron 40.0%
TCAAAATCTGAGTGGCATGT+AGG - chr5.4:37385753-37385772 MS.gene029652:CDS 40.0%
TCATAAGAAGAGGCTTAAGG+AGG - chr5.4:37387752-37387771 MS.gene029652:CDS 40.0%
TCATGTTGCTAAAGTGGAAC+TGG - chr5.4:37387214-37387233 MS.gene029652:intron 40.0%
TCATTTGGACATCTAGATCG+CGG - chr5.4:37388266-37388285 MS.gene029652:CDS 40.0%
TCTGTGGTAGTCAAATATCG+AGG + chr5.4:37385544-37385563 None:intergenic 40.0%
TTGATCATTCCCATGTGAGA+CGG - chr5.4:37388141-37388160 MS.gene029652:intron 40.0%
TTGCCTACCGTTCAATTTAC+AGG - chr5.4:37390298-37390317 MS.gene029652:CDS 40.0%
TTTCACAGAGGACAAATTGG+AGG - chr5.4:37388703-37388722 MS.gene029652:CDS 40.0%
TTTCTCAGATCAGCAGAAGA+AGG + chr5.4:37384156-37384175 None:intergenic 40.0%
TTTGACCAGCAAAGTGAACA+TGG + chr5.4:37390216-37390235 None:intergenic 40.0%
! AAGCACTCACCAACATTTTC+AGG + chr5.4:37388641-37388660 None:intergenic 40.0%
! AGCATTTTGCACAACTTCTG+TGG + chr5.4:37385560-37385579 None:intergenic 40.0%
! GAGTTCCTGTCAACTCTTTT+TGG - chr5.4:37388398-37388417 MS.gene029652:CDS 40.0%
! GAGTTTGAGTTAATCAACCG+AGG - chr5.4:37385651-37385670 MS.gene029652:intron 40.0%
! GTGCTCATCTGAAGCAATTA+CGG + chr5.4:37387366-37387385 None:intergenic 40.0%
! GTTGACTCATGTTGCTAAAG+TGG - chr5.4:37387208-37387227 MS.gene029652:CDS 40.0%
! GTTTGAGTTAATCAACCGAG+GGG - chr5.4:37385653-37385672 MS.gene029652:intron 40.0%
! TCTAGAACAAATGGCCGAAA+TGG - chr5.4:37384886-37384905 MS.gene029652:intron 40.0%
! TGATTGCTTAAATTGGTGCC+AGG - chr5.4:37386241-37386260 MS.gene029652:intron 40.0%
! TTCAATGGCACTGGAGAAAA+GGG - chr5.4:37386087-37386106 MS.gene029652:intron 40.0%
! TTTCAATGGCACTGGAGAAA+AGG - chr5.4:37386086-37386105 MS.gene029652:intron 40.0%
!! AAGTGGATTATGTGATGCGA+AGG - chr5.4:37387412-37387431 MS.gene029652:intron 40.0%
!! CTTCAGATTTCTGACTTGGT+GGG + chr5.4:37387944-37387963 None:intergenic 40.0%
!! GACGTATCCATTGGTAATGT+AGG - chr5.4:37387686-37387705 MS.gene029652:intron 40.0%
!! GGCTTGATTAGCTTGAGAAT+TGG - chr5.4:37388287-37388306 MS.gene029652:CDS 40.0%
!! TTCTGAAGCTGTAAAAGAGG+AGG - chr5.4:37384410-37384429 MS.gene029652:intron 40.0%
!!! AGAAGCATTTTGGAGAGTTC+AGG - chr5.4:37387528-37387547 MS.gene029652:intron 40.0%
!!! ATTGTTTTGGTAGGTCAACC+CGG + chr5.4:37388849-37388868 None:intergenic 40.0%
!!! CTGCTTTTTTGGTAACCAAC+AGG - chr5.4:37389543-37389562 MS.gene029652:CDS 40.0%
!!! GTGCTCTCTGGGATATTTTT+CGG - chr5.4:37387471-37387490 MS.gene029652:intron 40.0%
!!! TGGAGTTTTGTTCAGAAGCT+AGG - chr5.4:37387889-37387908 MS.gene029652:CDS 40.0%
AAAAGGGATTCTCGTGAAGG+CGG - chr5.4:37388169-37388188 MS.gene029652:CDS 45.0%
AAGAGGCTTAAGGAGGAGTA+TGG - chr5.4:37387759-37387778 MS.gene029652:CDS 45.0%
AATAGCACCTTGCAGAGTCA+AGG + chr5.4:37389044-37389063 None:intergenic 45.0%
AATGCACGCCATATGGCAAT+TGG + chr5.4:37386170-37386189 None:intergenic 45.0%
ACGATTCCTTCGACTGAGTT+AGG + chr5.4:37388363-37388382 None:intergenic 45.0%
ACTAAAGCTCTTGCATACGC+AGG + chr5.4:37385224-37385243 None:intergenic 45.0%
ACTGAATAACACAGGGAAGG+CGG - chr5.4:37385983-37386002 MS.gene029652:intron 45.0%
AGCAGTCATTTGAGTAGCTC+AGG + chr5.4:37386285-37386304 None:intergenic 45.0%
ATGGAGAGACCAATGTTGAC+AGG - chr5.4:37387321-37387340 MS.gene029652:intron 45.0%
ATGGATTTCATCGGGAGCTT+GGG - chr5.4:37386644-37386663 MS.gene029652:intron 45.0%
ATGTGAGACGGTTGGGAAAA+GGG - chr5.4:37388153-37388172 MS.gene029652:intron 45.0%
CAACTTTACCAGTTGCGTCA+AGG + chr5.4:37385091-37385110 None:intergenic 45.0%
CAAGTACGTCTCGTTTAAGC+TGG - chr5.4:37386141-37386160 MS.gene029652:intron 45.0%
CAGAGAAGAAGGAGGCTTTA+AGG - chr5.4:37384094-37384113 MS.gene029652:intron 45.0%
CATAGCAACAGCGAAGACAA+AGG + chr5.4:37385590-37385609 None:intergenic 45.0%
CATGCAGATAATCTTCCCCT+CGG + chr5.4:37385671-37385690 None:intergenic 45.0%
CCAAAACAATTGGGCCTGAT+TGG - chr5.4:37388859-37388878 MS.gene029652:CDS 45.0%
CCACCAAGTCAGAAATCTGA+AGG - chr5.4:37387942-37387961 MS.gene029652:CDS 45.0%
CCGTTCAATTTACAGGTCTG+AGG - chr5.4:37390305-37390324 MS.gene029652:CDS 45.0%
CTAAAGCTCTTGCATACGCA+GGG + chr5.4:37385223-37385242 None:intergenic 45.0%
CTGATGAAATGCACGCCATA+TGG + chr5.4:37386177-37386196 None:intergenic 45.0%
GAGCTAGTGGTAAATAGCCA+GGG + chr5.4:37388497-37388516 None:intergenic 45.0%
GAGTAATGCAGAGAAGAAGG+AGG - chr5.4:37384086-37384105 MS.gene029652:CDS 45.0%
GATCTGTAGGAATTGAGCCT+TGG - chr5.4:37387869-37387888 MS.gene029652:CDS 45.0%
GATTGCATACTTAAGGCCCA+AGG - chr5.4:37389630-37389649 MS.gene029652:intron 45.0%
GCACAATAGTGTTCGAGTCA+TGG - chr5.4:37387382-37387401 MS.gene029652:intron 45.0%
GCCTGCCACATCAATACTTA+AGG - chr5.4:37388238-37388257 MS.gene029652:CDS 45.0%
GCTGATCTGAGAAAGAAACG+TGG - chr5.4:37384162-37384181 MS.gene029652:intron 45.0%
GGAGCTACATGGTGATAATC+AGG - chr5.4:37387298-37387317 MS.gene029652:intron 45.0%
GGTAGTCAAATATCGAGGTC+TGG + chr5.4:37385539-37385558 None:intergenic 45.0%
GTAACATTCGTCTCAGCTCA+AGG + chr5.4:37385833-37385852 None:intergenic 45.0%
GTCGCAAGGATAAGCTTGAT+TGG - chr5.4:37386437-37386456 MS.gene029652:intron 45.0%
GTTGTTGTCATGTGACTGGA+AGG - chr5.4:37385107-37385126 MS.gene029652:intron 45.0%
TATGGATTTCATCGGGAGCT+TGG - chr5.4:37386643-37386662 MS.gene029652:intron 45.0%
TCTAGATCCTTGACTCTGCA+AGG - chr5.4:37389034-37389053 MS.gene029652:CDS 45.0%
TGAGCTAGTGGTAAATAGCC+AGG + chr5.4:37388498-37388517 None:intergenic 45.0%
TGCAGAGTCAAGGATCTAGA+TGG + chr5.4:37389034-37389053 None:intergenic 45.0%
TGGAACGGTCAAAATCTGAG+TGG - chr5.4:37385745-37385764 MS.gene029652:CDS 45.0%
TGGATTATGTGATGCGAAGG+TGG - chr5.4:37387415-37387434 MS.gene029652:intron 45.0%
TGGCAAGGAGGATATGAACT+CGG + chr5.4:37386530-37386549 None:intergenic 45.0%
TTTGACCGTTCCAGAATCTC+AGG + chr5.4:37385738-37385757 None:intergenic 45.0%
! ATGCAAGAGCTTTAGTGCAC+CGG - chr5.4:37385228-37385247 MS.gene029652:intron 45.0%
! CCAATCAGGCCCAATTGTTT+TGG + chr5.4:37388862-37388881 None:intergenic 45.0%
! CTGCCTGATAATGTTCACGT+GGG - chr5.4:37386601-37386620 MS.gene029652:intron 45.0%
! TCAATGGCACTGGAGAAAAG+GGG - chr5.4:37386088-37386107 MS.gene029652:intron 45.0%
! TTTTCCCAACCGTCTCACAT+GGG + chr5.4:37388153-37388172 None:intergenic 45.0%
!! CCTTCAGATTTCTGACTTGG+TGG + chr5.4:37387945-37387964 None:intergenic 45.0%
!! CTGGGATATTTTTCGGAGAG+AGG - chr5.4:37387478-37387497 MS.gene029652:intron 45.0%
!! GATGCATGTGCTTTGGTTTG+TGG - chr5.4:37384638-37384657 MS.gene029652:intron 45.0%
!! GCCTTAAGTATTGATGTGGC+AGG + chr5.4:37388242-37388261 None:intergenic 45.0%
!! TGACTCTGCAAGGTGCTATT+CGG - chr5.4:37389044-37389063 MS.gene029652:CDS 45.0%
!!! GATGCTGTTTTCATTCCAGC+TGG - chr5.4:37387913-37387932 MS.gene029652:CDS 45.0%
!!! TCAGGCCCAATTGTTTTGGT+AGG + chr5.4:37388858-37388877 None:intergenic 45.0%
!!! TAAATATGAATTTTTTATAA+CGG - chr5.4:37389907-37389926 MS.gene029652:CDS 5.0%
AAAGGGATTCTCGTGAAGGC+GGG - chr5.4:37388170-37388189 MS.gene029652:CDS 50.0%
AGCACCTTGAGCAAGACAAG+AGG - chr5.4:37387276-37387295 MS.gene029652:intron 50.0%
ATGAACTCGGTACAATGGCG+AGG + chr5.4:37386517-37386536 None:intergenic 50.0%
CAAGACAAGAGGGAGCTACA+TGG - chr5.4:37387287-37387306 MS.gene029652:intron 50.0%
CATGTGAGACGGTTGGGAAA+AGG - chr5.4:37388152-37388171 MS.gene029652:intron 50.0%
CATTCCCATGTGAGACGGTT+GGG - chr5.4:37388146-37388165 MS.gene029652:intron 50.0%
CGAGGGGAAGATTATCTGCA+TGG - chr5.4:37385669-37385688 MS.gene029652:intron 50.0%
GATGAGTGTGCTTACTGGTC+AGG - chr5.4:37385418-37385437 MS.gene029652:intron 50.0%
GATGGAAACTGAAACAGCGC+AGG - chr5.4:37384203-37384222 MS.gene029652:intron 50.0%
GCACCTTGAGCAAGACAAGA+GGG - chr5.4:37387277-37387296 MS.gene029652:intron 50.0%
GCTGGGAACCAATTGCCATA+TGG - chr5.4:37386159-37386178 MS.gene029652:intron 50.0%
GGGAAAAGGGATTCTCGTGA+AGG - chr5.4:37388166-37388185 MS.gene029652:intron 50.0%
GGTCCCACGTGAACATTATC+AGG + chr5.4:37386607-37386626 None:intergenic 50.0%
GTCATGTGACTGGAAGGTCA+CGG - chr5.4:37385113-37385132 MS.gene029652:intron 50.0%
GTTGCTATGAGCTTCGTCGT+GGG - chr5.4:37385601-37385620 MS.gene029652:intron 50.0%
GTTGGTCCTAACTCAGTCGA+AGG - chr5.4:37388354-37388373 MS.gene029652:CDS 50.0%
TCATGTGACTGGAAGGTCAC+GGG - chr5.4:37385114-37385133 MS.gene029652:intron 50.0%
TCATTCCCATGTGAGACGGT+TGG - chr5.4:37388145-37388164 MS.gene029652:intron 50.0%
TGAGTGCTTCCGTTTGACAG+AGG - chr5.4:37388652-37388671 MS.gene029652:CDS 50.0%
TGGGTACACAAATGGTCGCA+AGG - chr5.4:37386423-37386442 MS.gene029652:intron 50.0%
TGTGTTGCAGTCATGCACCA+AGG - chr5.4:37388595-37388614 MS.gene029652:CDS 50.0%
TGTTGCTATGAGCTTCGTCG+TGG - chr5.4:37385600-37385619 MS.gene029652:intron 50.0%
TTGCTATGAGCTTCGTCGTG+GGG - chr5.4:37385602-37385621 MS.gene029652:intron 50.0%
! CTTTTCCCAACCGTCTCACA+TGG + chr5.4:37388154-37388173 None:intergenic 50.0%
! GCTGCCTGATAATGTTCACG+TGG - chr5.4:37386600-37386619 MS.gene029652:intron 50.0%
! TGCAAGAGCTTTAGTGCACC+GGG - chr5.4:37385229-37385248 MS.gene029652:intron 50.0%
!! AGCATGAGAGTGCCAACGAT+AGG + chr5.4:37388902-37388921 None:intergenic 50.0%
AAGGGATTCTCGTGAAGGCG+GGG - chr5.4:37388171-37388190 MS.gene029652:CDS 55.0%
AAGGTCACGGGTTCAAGTGC+TGG - chr5.4:37385126-37385145 MS.gene029652:intron 55.0%
ACCGTTCCAGAATCTCAGGC+TGG + chr5.4:37385734-37385753 None:intergenic 55.0%
AGGGGTAACCTTGACGCAAC+TGG - chr5.4:37385080-37385099 MS.gene029652:intron 55.0%
ATTTCATCGGGAGCTTGGGC+GGG - chr5.4:37386648-37386667 MS.gene029652:intron 55.0%
CCGTTCCAGAATCTCAGGCT+GGG + chr5.4:37385733-37385752 None:intergenic 55.0%
CTCTTGCATACGCAGGGTTC+GGG + chr5.4:37385217-37385236 None:intergenic 55.0%
GAGTGGCATGTAGGCAGTGA+TGG - chr5.4:37385762-37385781 MS.gene029652:CDS 55.0%
GATTTCATCGGGAGCTTGGG+CGG - chr5.4:37386647-37386666 MS.gene029652:intron 55.0%
GCTCCCTCTTGTCTTGCTCA+AGG + chr5.4:37387283-37387302 None:intergenic 55.0%
GCTCTTGCATACGCAGGGTT+CGG + chr5.4:37385218-37385237 None:intergenic 55.0%
TATCAGGCAGCTTCGCAGCA+AGG + chr5.4:37386591-37386610 None:intergenic 55.0%
TTCCAGAATCTCAGGCTGGG+CGG + chr5.4:37385730-37385749 None:intergenic 55.0%
! CCCAGCCTGAGATTCTGGAA+CGG - chr5.4:37385730-37385749 MS.gene029652:CDS 55.0%
! GAAGGCGGGGGTGTAGAATT+TGG - chr5.4:37388184-37388203 MS.gene029652:CDS 55.0%
AGGGATTCTCGTGAAGGCGG+GGG - chr5.4:37388172-37388191 MS.gene029652:CDS 60.0%
CATACGCAGGGTTCGGGAAG+AGG + chr5.4:37385211-37385230 None:intergenic 60.0%
CGGGAAGAGGTCCCACCATT+TGG + chr5.4:37385198-37385217 None:intergenic 60.0%
CTTCGTCGTGGGGAGCTTCT+AGG - chr5.4:37385612-37385631 MS.gene029652:intron 60.0%
GGGGAGCTTCTAGGTGGTAC+TGG - chr5.4:37385621-37385640 MS.gene029652:intron 60.0%
TTTCATCGGGAGCTTGGGCG+GGG - chr5.4:37386649-37386668 MS.gene029652:intron 60.0%
! ACTTGGTGGGCACAACCAGC+TGG + chr5.4:37387931-37387950 None:intergenic 60.0%
CGTCGTGGGGAGCTTCTAGG+TGG - chr5.4:37385615-37385634 MS.gene029652:intron 65.0%
TGCCGCCCAGCCTGAGATTC+TGG - chr5.4:37385725-37385744 MS.gene029652:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 37384084 37390347 37384084 ID=MS.gene029652
chr5.4 mRNA 37384084 37390347 37384084 ID=MS.gene029652.t1;Parent=MS.gene029652
chr5.4 exon 37389856 37390347 37389856 ID=MS.gene029652.t1.exon1;Parent=MS.gene029652.t1
chr5.4 CDS 37389856 37390347 37389856 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37389502 37389640 37389502 ID=MS.gene029652.t1.exon2;Parent=MS.gene029652.t1
chr5.4 CDS 37389502 37389640 37389502 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37388997 37389063 37388997 ID=MS.gene029652.t1.exon3;Parent=MS.gene029652.t1
chr5.4 CDS 37388997 37389063 37388997 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37388169 37388904 37388169 ID=MS.gene029652.t1.exon4;Parent=MS.gene029652.t1
chr5.4 CDS 37388169 37388904 37388169 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37387720 37388037 37387720 ID=MS.gene029652.t1.exon5;Parent=MS.gene029652.t1
chr5.4 CDS 37387720 37388037 37387720 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37386854 37387231 37386854 ID=MS.gene029652.t1.exon6;Parent=MS.gene029652.t1
chr5.4 CDS 37386854 37387231 37386854 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37386651 37386723 37386651 ID=MS.gene029652.t1.exon7;Parent=MS.gene029652.t1
chr5.4 CDS 37386651 37386723 37386651 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37386468 37386553 37386468 ID=MS.gene029652.t1.exon8;Parent=MS.gene029652.t1
chr5.4 CDS 37386468 37386553 37386468 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37385707 37385826 37385707 ID=MS.gene029652.t1.exon9;Parent=MS.gene029652.t1
chr5.4 CDS 37385707 37385826 37385707 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37384808 37384866 37384808 ID=MS.gene029652.t1.exon10;Parent=MS.gene029652.t1
chr5.4 CDS 37384808 37384866 37384808 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
chr5.4 exon 37384084 37384111 37384084 ID=MS.gene029652.t1.exon11;Parent=MS.gene029652.t1
chr5.4 CDS 37384084 37384111 37384084 ID=cds.MS.gene029652.t1;Parent=MS.gene029652.t1
Gene Sequence

>MS.gene029652

ATGAGTAATGCAGAGAAGAAGGAGGCTTTAAGGAGAATGTTAGAGAATGATGAAGAAACTGATAAAGATCCTTCTTCTGCTGATCTGAGAAAGAAACGTGGCAGAAAGAAAAAAGTGAAGATGGAAACTGAAACAGCGCAGGAATGTTCTTCTTTTTTTGTTGCTGTTGCTGTAAATAAGAGTAAAGTGGTGGAAAAAGTTGTGAAGAAGAAAGAAAATCGAGGTAGGAAAAGGAAGACAACAATTTCTGATGAAAATAATGCTGCCAAAGAGAAGAAGAAGAAGAAGAAAGAAAATCGTGGTAGGAAGAGAAAGAGAATGTTTAGTTCTGAAGCTGTAAAAGAGGAGGAAAATGGTGGTTTTGTGAAGAAGGAGAAGAAGGAACCTAATGGGAAAAGAAAAATGCCTGTATCTGATAATAATAATAATAATAATAAAGGAGGTTATGCTTTAAGAAGTGCTGAAAAAATGAAACTTGATTGCATGCATAAGGTAACATCACATTACATGATATCTTTGATCTTTGTAGTTATTGCTATATGCATGTTTTTGTTGATGCATGTGCTTTGGTTTGTGGTAATTGCAATTACAAAGCTAGTTTGCATTCATGTGATCAACTAATCAAATTCTGTTATTCATGGAATATACTATTTTTTTTGTATTCTATATTTGATTTGAAATGTGATTCATCATTTTATTCACTACAGAAGACTAAGAACAAGACAGAAAGCAACAATGATCATGACATTGAAACTTCCAAGTATATGCTAGAATACCTTCTTCCATATTTAAGACAATTAGATCTAGAACAAATGGCCGAAATGGAGATAGAAGCCAAAATACAAGGTGTTCTTTTCCTTCAATCCTTGTTTTTTCTTATTAATGTCATTTGCTTTGCTCATGATTCATAGTTTTGATACTACTACAAATTGATATCCTGGTATGCACTATTTTTATTGTATGTTTTTTCTTTCTTCTTGTTATGTGTTAAGTTTGAGGGGTAACCTTGACGCAACTGGTAAAGTTGTTGTCATGTGACTGGAAGGTCACGGGTTCAAGTGCTGGAAACAGCCTCTTGTGTAAAAAACAGGGTAAGGCTGCATACAATACACCAAATGGTGGGACCTCTTCCCGAACCCTGCGTATGCAAGAGCTTTAGTGCACCGGGTTGCCCTTTTTTATTATGTGTTAAGTTTGTATTTCATCTCATGCATGATCCAATAGGAGATCATTCTTAGTTTCATATATATATTTTTTAAATTGCTATTGGAATGATCATTACAGGGCTCTCATCACTCTCTGAGCTAAAGATAAAAGTAGCATATTGCTCTAAAGATGAGTGTGCTTACTGGTCAGGACTTATACTTTACCATGTTTTGGTTTTCTTAGTTATAATTATAATGCTATATTATTGTTGTTGCTGACTTAAAAAACTTTTTGTAGTGACAACTGCCAGACCTCGATATTTGACTACCACAGAAGTTGTGCAAAATGCTCTTTTGACCTTTGTCTTCGCTGTTGCTATGAGCTTCGTCGTGGGGAGCTTCTAGGTGGTACTGGTCCAATTGAGTTTGAGTTAATCAACCGAGGGGAAGATTATCTGCATGGTGAGATAATAATCGGAGAAAATGAATCTCATGCTGCCGCCCAGCCTGAGATTCTGGAACGGTCAAAATCTGAGTGGCATGTAGGCAGTGATGGTAACATTCGCTGTCCAAAAGCCAATAATGAAGGTGATCATGGTTTCCTTGAGCTGAGACGAATGTTACCGCCAAATTGCATTTCTGAGTTGGTATGTAAAGCAAAACAATTTAAAGAAGCCGTTAATCTCGAAGATATCGAGGAGACTCTTGATAATGTTTGCTCTTGTTTGAAGCCTGTTAAGAAGGAAGATAATATACTGAATAACACAGGGAAGGCGGTTTGTGAAGATTCCAGTGAAAACTTTTTATACTGTCCTAAGGCTATTGATCTACATAATCACGAGAAGGATTTAAGACATTTTCAATGGCACTGGAGAAAAGGGGAGCCTGTAATTGTCAACAACGTTCTTGAATCAAGTACGTCTCGTTTAAGCTGGGAACCAATTGCCATATGGCGTGCATTTCATCAGATAAGTGATACCAATGACAATTCACTTTCGAATGTGAAGGCAATTGATTGCTTAAATTGGTGCCAGGTTAGTTCGATTTCTTAATCCTGAGCTACTCAAATGACTGCTTAGTTTAACTAATTTGTTCTACTATACTTGTCATGTCCATCTGTTCCTTGTAATTTCTAAATTTTTATTTGACTGTTGATTCAATGCAGGGAGATATTAAAGTGCATGATTTCTTTACTGGGTACACAAATGGTCGCAAGGATAAGCTTGATTGGCCTCAGCTATTGAAATTGAATGATCGGCCTCCTTATTTATTTGAGAAAAATTTGCCTCGCCATTGTACCGAGTTCATATCCTCCTTGCCATATAAAGAATATACAGATCCTTTCAAAGGGGATCTTAACCTTGCTGCGAAGCTGCCTGATAATGTTCACGTGGGACCAAAAACATATATTGCTTATGGATTTCATCGGGAGCTTGGGCGGGGTGATTCTGTGACTAAGCTCCACTGTGATATGTCTGATGTAGTATGTTTCAATTCTGTCTTTCCTGGACTGTATTTTCTAGAATGTCTTACGAATCTTTTGATACTTATATTGTTATTTTTATTTGCGTAGCATATTGAAAGGTGCATAGTTTGAAGGATGTATACTGATAGTTATGAAGTTTGACGTACATGTCTTGATAATTTGCTTATTGATGTCTTTGAAAACACTCATTTGATTTTATGTTTTATTTTGTGTAATTTACCTTGGTGTTTTGGTAATTGATAATGATAATTTGAAGAAAAATACTCTTTTTATGATAAGTTGTATCATTAGATAGTCTTGAAGTATGAATGATGACTTTCGATTAGAAAGTTGTAATCGATGTAAACTCCCATCAAATAAATTGTCTTTCCGGATTAATTCTTGTTTGTGCTTTATATTTTTGCTTTGTGTCTCTAAGTGCATACTCTATCAAGTGGAGAATGAAATGTTGCCGTGTTTTTTTCTTTGATAATTTGGCTTTTTAGGTAAATGTGTTGACTCATGTTGCTAAAGTGGAACTGGAAACTGTGGGCATTACTGCAATTAAGAAATTAACACAAAAGCACCTTGAGCAAGACAAGAGGGAGCTACATGGTGATAATCAGGATGGAGAGACCAATGTTGACAGGCTTGATAATCCGTCTTCTTCCGTAATTGCTTCAGATGAGCACAATAGTGTTCGAGTCATGGAAAATGAAAGTGGATTATGTGATGCGAAGGTGGTTGATTCAGTTCATCAAGAAAATAGTTTAGATGGTGCTCTCTGGGATATTTTTCGGAGAGAGGATGTACCTAAATTGAAGGAATATCTGAAGAAGCATTTTGGAGAGTTCAGGCATATCTATTGTTCTCCTTTAAAGCAGGTAAAGTCAGATATGCGAATAAGAGATCTCAATTATCTGCCAACATTTTCCTTCATTTTCTCTTGTTTTCTCACTAATTATGTATGCGTGCATTTTCTTGAGTTGAATGACGTATCCATTGGTAATGTAGGTTATTCATCCCATCCATGATCAGACGTTTTATCTTACTAACAATCATAAGAAGAGGCTTAAGGAGGAGTATGGTTAGTAGTGTTTATAATTTTTGTACACTGTTTGGTTTGTGGAGTGTTGATCCATACAGTTGTACCATTTTGTTAACAATTCAACATTGATCTGTAGGAATTGAGCCTTGGAGTTTTGTTCAGAAGCTAGGAGATGCTGTTTTCATTCCAGCTGGTTGTGCCCACCAAGTCAGAAATCTGAAGGTAAAACTTATGTGCATGGTGGATTTGTTTTATCGTTAATGAAGGTGTAAGTTTTCCTTCTATGGTTAATAAAGAGAATTAAGATAAACTGATCATGACTTGAGAACCAACATCATATAACTAACTATTATGAAAGTTTGAGACCGTCGTAATAGATTTATACTTCCATATTTCCATTTGATCATTCCCATGTGAGACGGTTGGGAAAAGGGATTCTCGTGAAGGCGGGGGTGTAGAATTTGGATTGATCCTTACTCAAATACACAAAACGAATGCCTGCCACATCAATACTTAAGGCCATATCATTTGGACATCTAGATCGCGGCTTGATTAGCTTGAGAATTGGTAACTCAATGGAGATAGGATAGGTTCTGATATCTTAGTACTTTTGTTGGTCCTAACTCAGTCGAAGGAATCGTTTAAGTTAATGATTTGAGTTCCTGTCAACTCTTTTTGGATACTGAATTTTTATTTTTTTTTTACAATAACAGCATGAAGATTTGAACCTACATACAATTTTTTACAAATTACCCTGGCTATTTACCACTAGCTCATCACTTTTTTGTCTTGATTGCTATTCTTTCTAGCTAATGCTTGAAAAGTTTGTATGAATGTCAATGATATGCATTGTTGTGTTGCAGTCATGCACCAAGGTTGCACTTGATTTTGTCTCTCCTGAAAATGTTGGTGAGTGCTTCCGTTTGACAGAGGAAATCCGTAAACTTCCAGTAAATCACTATTTCACAGAGGACAAATTGGAGGTATGCTAGACTACTTTTATGGATTTGATTCTGACGAGTATACTCTTATCAATTAATTTGTGATATTGCATCTTTTATTCTCTACTTTAATGTGGTTATAGCTTCATAGAAGTTTTAGAATCCGGGTTGACCTACCAAAACAATTGGGCCTGATTGGAAGCTCAGTATACTACACCTATCGTTGGCACTCTCATGCTGCATTTGTCCAAATCCGAACACTTACATTGGTTGAAATGGTTCACTCATATTATTCATTGAAATGGTTCAAGCATATTATTCATATTTCCTTGAATTAAACTTATTTTACCATCTAGATCCTTGACTCTGCAAGGTGCTATTCGGTCCACTTTTGTAATTGTAATGTAATGTCAATTACAAAAGAAAAATGAATGGAAGCTCAGTATACTACACCTATCGTTGGCACTCTCATGCTGCATTTGTCCAAATCCGAACACTTACATTGGTTGAAATGGTTCACTCATATTATTCATTGAAATGGTTCAAGCATATTATTCATATTTCCTTGAATTAAACTTATTTTACCATCTAGATCCTTGACTCTGCAAGGTGCTATTCGGTCCACTTTTGTAATTGTAATGTAATGTCAATTACAAAAGAAAATACGATCGGAATGGGAAAAATGAAAAATGGTTCTGTATATTTAGTAGGCAATTTATAATTTTGATTGAATGTTTCTTTGAAAAGTCATTAATTGGTTTTATATTTATATTTTTCTATCAAGTGTTCATTTCTGAATCATACCATCATGTCATGTCAATAGATTCTTATTGGTATTTTGTGTACTGTTTTTCTGATTGCTGCTTTTTTGGTAACCAACAGGTGAAGAAAATGATTATACATGCTATGCTTGATGTGGTAGAAAAGTTGGAGAATGCAAGGTTAGTGATTGCATACTTAAGGCCCAAGGTTATTGAATATAGGGTTAAATATGTTTTTGGTCCCTATAAAATTGGGAATTTCTAAGTTTAGTCCTTACTTAATTTTAATAGGTTTTTTAGTCCCTACAAAAAAAAATTACTTCTAATTTTAGTCCCTGTTACAACAAAGTTTGTTTAATTATTCTTAAACTTTTAAATTTTTGTACGATTTTTTTGAGACAAGTTTAGAATACTATAAAAGGTTCATTAACTAAAATTTAGAATTTTTTAACATAAAACGAATTAAATATGAATTTTTTATAACGGCAAAAGTTAAAGATAAAATTAACAAAATCTGGACGTAGAAATCAAATTTTGCGACAATTTTTTGCAGAGGAACTTTTAGTAATGTTCTTAACACGTCTGTAAAAAATTGTTCAAAAACTCAAGATTTTAAGCATAAATTAAACAAATTTGAATTGAGGAGGGACTAATACTGAGTGCAGAAATTTTTTATAGGGACTAAAAGAACTATTAAAATTAAGTAAGGACTAAACTTAAAAGGTCCCAATTTTATAGGGACTGAAAACATATTTAACCCTTGAATATACCATGTTCACTTTGCTGGTCAAATGCATTGACAATCATATATTGTATTTTATTTTAGTTTCTCTAGGCTCACGATTTTGCCGATTTTGCCTACCGTTCAATTTACAGGTCTGAGGAAACCGATGTTCCTTTGTAA
Protein sequence

>MS.gene029652.t1

MSNAEKKEALRRMLENDEETDKDPSSADLRKKRGRKKKVKMETETAQECSSFFVAVAVNKSKVVEKVVKKKENRGRKRKTTISDENNAAKEKKKKKKENRGRKRKRMFSSEAVKEEENGGFVKKEKKEPNGKRKMPVSDNNNNNNKGGYALRSAEKMKLDCMHKKTKNKTESNNDHDIETSKYMLEYLLPYLRQLDLEQMAEMEIEAKIQGLSSLSELKIKVAYCSKDECAYCDNCQTSIFDYHRSCAKCSFDLCLRCCYELRRGELLGGTGPIEFELINRGEDYLHGEIIIGENESHAAAQPEILERSKSEWHVGSDGNIRCPKANNEGDHGFLELRRMLPPNCISELVCKAKQFKEAVNLEDIEETLDNVCSCLKPVKKEDNILNNTGKAVCEDSSENFLYCPKAIDLHNHEKDLRHFQWHWRKGEPVIVNNVLESSTSRLSWEPIAIWRAFHQISDTNDNSLSNVKAIDCLNWCQGDIKVHDFFTGYTNGRKDKLDWPQLLKLNDRPPYLFEKNLPRHCTEFISSLPYKEYTDPFKGDLNLAAKLPDNVHVGPKTYIAYGFHRELGRGDSVTKLHCDMSDVVNVLTHVAKVELETVGITAIKKLTQKHLEQDKRELHGDNQDGETNVDRLDNPSSSVIASDEHNSVRVMENESGLCDAKVVDSVHQENSLDGALWDIFRREDVPKLKEYLKKHFGEFRHIYCSPLKQVIHPIHDQTFYLTNNHKKRLKEEYGIEPWSFVQKLGDAVFIPAGCAHQVRNLKSCTKVALDFVSPENVGECFRLTEEIRKLPVNHYFTEDKLEVKKMIIHAMLDVVEKLENARSEETDVPL