AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029808

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029808.t1 MTR_1g063870 94.203 207 9 3 1 206 1 205 1.64e-102 295
MS.gene029808.t1 MTR_7g028160 60.577 104 36 2 15 118 20 118 1.38e-36 129
MS.gene029808.t1 MTR_2g006150 60.000 100 29 1 14 113 105 193 3.59e-35 129
MS.gene029808.t1 MTR_2g006150 60.000 100 29 1 14 113 105 193 3.65e-35 129
MS.gene029808.t1 MTR_8g033070 78.378 74 16 0 49 122 79 152 3.93e-35 126
MS.gene029808.t1 MTR_4g108370 73.171 82 19 1 31 112 81 159 5.71e-35 128
MS.gene029808.t1 MTR_5g039600 73.684 76 20 0 49 124 66 141 9.71e-35 127
MS.gene029808.t1 MTR_1g114380 72.500 80 17 2 34 112 20 95 1.76e-34 123
MS.gene029808.t1 MTR_1g038650 68.235 85 21 2 39 121 25 105 4.70e-34 121
MS.gene029808.t1 MTR_1g101810 73.077 78 21 0 45 122 59 136 1.42e-33 122
MS.gene029808.t1 MTR_1g101810 73.077 78 21 0 45 122 89 166 2.93e-33 122
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029808.t1 AT2G37000 55.556 144 46 4 50 192 43 169 5.12e-40 135
MS.gene029808.t1 AT1G58100 55.932 118 41 1 48 154 58 175 5.84e-36 130
MS.gene029808.t1 AT1G69690 67.816 87 25 2 28 113 31 115 1.14e-35 128
MS.gene029808.t1 AT1G72010 72.973 74 20 0 39 112 52 125 6.65e-35 127
MS.gene029808.t1 AT5G08330 76.316 76 14 1 50 121 31 106 6.95e-35 124
MS.gene029808.t1 AT3G47620 76.000 75 17 1 39 112 105 179 9.21e-35 128
MS.gene029808.t1 AT3G27010 62.626 99 30 3 19 111 42 139 4.45e-34 123
MS.gene029808.t1 AT3G27010 62.626 99 30 3 19 111 42 139 4.45e-34 123
MS.gene029808.t1 AT2G45680 77.027 74 17 0 49 122 74 147 5.32e-34 124
MS.gene029808.t1 AT5G23280 65.556 90 30 1 51 140 40 128 1.35e-33 120
MS.gene029808.t1 AT5G51910 70.370 81 23 1 43 122 49 129 4.05e-32 118
MS.gene029808.t1 AT5G51910 70.370 81 23 1 43 122 49 129 4.05e-32 118
MS.gene029808.t1 AT1G35560 78.462 65 14 0 48 112 53 117 7.65e-32 118
MS.gene029808.t1 AT5G41030 59.302 86 32 1 47 132 65 147 7.75e-31 113
MS.gene029808.t1 AT3G45150 45.455 99 50 2 48 142 15 113 2.74e-22 89.4
MS.gene029808.t1 AT1G58100 88.571 35 4 0 48 82 58 92 2.60e-15 73.9

Find 86 sgRNAs with CRISPR-Local

Find 95 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAAGGTTTGGTTTCTGAT+TGG 0.336354 1.2:-48778111 None:intergenic
CGACTGTTGGTCCCGGCGGT+GGG 0.370781 1.2:+48778479 MS.gene029808:CDS
CCTGTCTCAGCCGGCGGGGA+TGG 0.373484 1.2:+48778555 MS.gene029808:CDS
ACGACTGTTGGTCCCGGCGG+TGG 0.375769 1.2:+48778478 MS.gene029808:CDS
GGAAGGTTTGGTTTCTGATT+GGG 0.382038 1.2:-48778110 None:intergenic
ACTGTTGGTCCCGGCGGTGG+GGG 0.398278 1.2:+48778481 MS.gene029808:CDS
CGGTCCGGCGGGGACAGTTC+CGG 0.401737 1.2:-48778389 None:intergenic
TGTTACGGCGGTGGAAGGTT+TGG 0.414434 1.2:-48778122 None:intergenic
TCGGACGGTGAGTTTGGTGT+TGG 0.415353 1.2:-48778173 None:intergenic
CGGACGGTGAGTTTGGTGTT+GGG 0.422384 1.2:-48778172 None:intergenic
AGGTCTTCGGACGGTGAGTT+TGG 0.426516 1.2:-48778179 None:intergenic
CAGCCGGCGGGGATGGATTA+CGG 0.432604 1.2:+48778562 MS.gene029808:CDS
CTTGGTGTGACGGTCTTTAG+TGG 0.437844 1.2:-48778215 None:intergenic
GGTGGCGACGGTGGTTGTTA+CGG 0.437898 1.2:-48778137 None:intergenic
GACTGTTGGTCCCGGCGGTG+GGG 0.441550 1.2:+48778480 MS.gene029808:CDS
TTTGGTGTTGGGATCGGAAG+AGG 0.447134 1.2:-48778161 None:intergenic
GCATACGGACACGGCGGCCA+CGG 0.450952 1.2:-48778246 None:intergenic
GTTGGGATCGGAAGAGGTGG+TGG 0.463601 1.2:-48778155 None:intergenic
CGGCAGCTCGGCTGTTGCAT+CGG 0.466946 1.2:-48778526 None:intergenic
CCATCCCCGCCGGCTGAGAC+AGG 0.467844 1.2:-48778555 None:intergenic
CCGTCGATCATCGCCGCTAC+AGG 0.469019 1.2:+48778364 MS.gene029808:CDS
ATCGAGAGGTGGAAGGTCTT+CGG 0.469473 1.2:-48778192 None:intergenic
CTTGACCTGTCTCAGCCGGC+GGG 0.470366 1.2:+48778550 MS.gene029808:CDS
TTCTCCGTTTAAGTCTTCCT+CGG 0.470391 1.2:+48778423 MS.gene029808:CDS
CGGAACTGTCCCCGCCGGAC+CGG 0.473172 1.2:+48778390 MS.gene029808:CDS
GGCCGTTGACCTTGGTGTGA+CGG 0.473677 1.2:-48778225 None:intergenic
AACGGAGAAGAGGTGGAAAC+CGG 0.477385 1.2:-48778409 None:intergenic
GAGGTGGAAACCGGTCCGGC+GGG 0.478968 1.2:-48778400 None:intergenic
CGGCGCAGAGTGGCGGCATA+CGG 0.487397 1.2:-48778261 None:intergenic
GACCTAGCTCACGTGTGAGC+TGG 0.488472 1.2:-48778294 None:intergenic
ATCGGAAGAGGTGGTGGCGA+CGG 0.493308 1.2:-48778149 None:intergenic
GCGGCCACGGCCGTTGACCT+TGG 0.496284 1.2:-48778233 None:intergenic
GGTGAGTTTGGTGTTGGGAT+CGG 0.500790 1.2:-48778167 None:intergenic
CAGCTCGGCTGTTGCATCGG+CGG 0.511331 1.2:-48778523 None:intergenic
CCTGTGACGACTGTTGGTCC+CGG 0.512876 1.2:+48778472 MS.gene029808:CDS
GGTGTTGGGATCGGAAGAGG+TGG 0.520667 1.2:-48778158 None:intergenic
CTGTTGGTCCCGGCGGTGGG+GGG 0.522672 1.2:+48778482 MS.gene029808:CDS
AGAAGAGGTGGAAACCGGTC+CGG 0.523967 1.2:-48778404 None:intergenic
CACACCAAGGTCAACGGCCG+TGG 0.526935 1.2:+48778229 MS.gene029808:CDS
ATCATCGCCGCTACAGGTAC+CGG 0.527492 1.2:+48778370 MS.gene029808:CDS
GTGGTTGTTACGGCGGTGGA+AGG 0.530957 1.2:-48778127 None:intergenic
TAAGTCTTCCTCGGTGCCGT+CGG 0.539714 1.2:+48778432 MS.gene029808:CDS
CCGTCTTGACCTGTCTCAGC+CGG 0.539844 1.2:+48778546 MS.gene029808:CDS
AGAGGTGGAAACCGGTCCGG+CGG 0.541236 1.2:-48778401 None:intergenic
GACGGTGGTTGTTACGGCGG+TGG 0.541430 1.2:-48778131 None:intergenic
TTCCAGCTCACACGTGAGCT+AGG 0.544068 1.2:+48778292 MS.gene029808:CDS
GGCACCGAGGAAGACTTAAA+CGG 0.544702 1.2:-48778427 None:intergenic
ATTCTAGCGGCGCAGAGTGG+CGG 0.558629 1.2:-48778268 None:intergenic
CCGGGACCAACAGTCGTCAC+AGG 0.561674 1.2:-48778472 None:intergenic
TCTTGACCTGTCTCAGCCGG+CGG 0.565908 1.2:+48778549 MS.gene029808:CDS
GGAAGAGGTGGTGGCGACGG+TGG 0.571531 1.2:-48778146 None:intergenic
GACAGTTCCGGTACCTGTAG+CGG 0.580616 1.2:-48778377 None:intergenic
CCTGTAGCGGCGATGATCGA+CGG 0.581417 1.2:-48778364 None:intergenic
GACCGTCACACCAAGGTCAA+CGG 0.592588 1.2:+48778223 MS.gene029808:CDS
GTCTTTAGTGGATCGAGAGG+TGG 0.595562 1.2:-48778203 None:intergenic
TGCAAAAGCAGCGACGTGAA+CGG 0.596315 1.2:-48778610 None:intergenic
AGACTTAAACGGAGAAGAGG+TGG 0.603538 1.2:-48778416 None:intergenic
GTGCCGTAATCCATCCCCGC+CGG 0.610684 1.2:-48778565 None:intergenic
GACAGGTCAAGACGGCAGCT+CGG 0.611079 1.2:-48778538 None:intergenic
TACAACAATGTCTTCATCAG+AGG 0.612302 1.2:+48778063 None:intergenic
TGGATTACGGCACGGCGAGT+AGG 0.614506 1.2:+48778575 MS.gene029808:CDS
CGATCGTTTCACCGTCGGAA+CGG 0.615737 1.2:-48778318 None:intergenic
GGAAGACTTAAACGGAGAAG+AGG 0.618830 1.2:-48778419 None:intergenic
GTTCAGCCTGTGACGACTGT+TGG 0.621754 1.2:+48778466 MS.gene029808:CDS
CCGGCTGAGACAGGTCAAGA+CGG 0.630042 1.2:-48778546 None:intergenic
AGAGTGGCGGCATACGGACA+CGG 0.630769 1.2:-48778255 None:intergenic
ATTGGGTTTGAGAGAATGTG+TGG 0.635459 1.2:-48778093 None:intergenic
AGGTGGAAACCGGTCCGGCG+GGG 0.639096 1.2:-48778399 None:intergenic
GGTACCGGAACTGTCCCCGC+CGG 0.641499 1.2:+48778385 MS.gene029808:CDS
GGCGACGGTGGTTGTTACGG+CGG 0.645530 1.2:-48778134 None:intergenic
CCACTCGATCGTTTCACCGT+CGG 0.646740 1.2:-48778323 None:intergenic
GAGCTAGGTCACCGTTCCGA+CGG 0.649168 1.2:+48778307 MS.gene029808:CDS
ACGGTCTTTAGTGGATCGAG+AGG 0.661410 1.2:-48778206 None:intergenic
GGCGGGGATGGATTACGGCA+CGG 0.663996 1.2:+48778567 MS.gene029808:CDS
TTAGTGGATCGAGAGGTGGA+AGG 0.665756 1.2:-48778199 None:intergenic
CACTAAAGACCGTCACACCA+AGG 0.674968 1.2:+48778216 MS.gene029808:CDS
ACAAGAAACCGACGGCACCG+AGG 0.684600 1.2:-48778440 None:intergenic
AGAGGTGGAAGGTCTTCGGA+CGG 0.686301 1.2:-48778188 None:intergenic
TTGACCTGTCTCAGCCGGCG+GGG 0.687922 1.2:+48778551 MS.gene029808:CDS
TGAACATGACAAGAAACCGA+CGG 0.690502 1.2:-48778448 None:intergenic
AAGATTCTAGCGGCGCAGAG+TGG 0.698200 1.2:-48778271 None:intergenic
CCGACGGTGAAACGATCGAG+TGG 0.701087 1.2:+48778323 MS.gene029808:CDS
TGTGAGCTGGAAGATTCTAG+CGG 0.731020 1.2:-48778281 None:intergenic
TTTGCAACCGTCGACCACGG+GGG 0.740183 1.2:+48778627 MS.gene029808:CDS
GTGACGACTGTTGGTCCCGG+CGG 0.740863 1.2:+48778475 MS.gene029808:CDS
GTGGCGGCATACGGACACGG+CGG 0.797562 1.2:-48778252 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
ATTGGGTTTGAGAGAATGTG+TGG - chr1.2:48778096-48778115 None:intergenic 40.0%
TGAACATGACAAGAAACCGA+CGG - chr1.2:48778451-48778470 None:intergenic 40.0%
TTCTCCGTTTAAGTCTTCCT+CGG + chr1.2:48778423-48778442 MS.gene029808:CDS 40.0%
! GGAAGGTTTGGTTTCTGATT+GGG - chr1.2:48778113-48778132 None:intergenic 40.0%
! TGGAAGGTTTGGTTTCTGAT+TGG - chr1.2:48778114-48778133 None:intergenic 40.0%
AGACTTAAACGGAGAAGAGG+TGG - chr1.2:48778419-48778438 None:intergenic 45.0%
GGAAGACTTAAACGGAGAAG+AGG - chr1.2:48778422-48778441 None:intergenic 45.0%
TGTGAGCTGGAAGATTCTAG+CGG - chr1.2:48778284-48778303 None:intergenic 45.0%
AACGGAGAAGAGGTGGAAAC+CGG - chr1.2:48778412-48778431 None:intergenic 50.0%
ATCGAGAGGTGGAAGGTCTT+CGG - chr1.2:48778195-48778214 None:intergenic 50.0%
CACTAAAGACCGTCACACCA+AGG + chr1.2:48778216-48778235 MS.gene029808:CDS 50.0%
TGCAAAAGCAGCGACGTGAA+CGG - chr1.2:48778613-48778632 None:intergenic 50.0%
! ACGGTCTTTAGTGGATCGAG+AGG - chr1.2:48778209-48778228 None:intergenic 50.0%
! CTTGGTGTGACGGTCTTTAG+TGG - chr1.2:48778218-48778237 None:intergenic 50.0%
! GGCACCGAGGAAGACTTAAA+CGG - chr1.2:48778430-48778449 None:intergenic 50.0%
! GTCTTTAGTGGATCGAGAGG+TGG - chr1.2:48778206-48778225 None:intergenic 50.0%
! TTAGTGGATCGAGAGGTGGA+AGG - chr1.2:48778202-48778221 None:intergenic 50.0%
!! GGTGAGTTTGGTGTTGGGAT+CGG - chr1.2:48778170-48778189 None:intergenic 50.0%
!! TTTGGTGTTGGGATCGGAAG+AGG - chr1.2:48778164-48778183 None:intergenic 50.0%
AAGATTCTAGCGGCGCAGAG+TGG - chr1.2:48778274-48778293 None:intergenic 55.0%
AGAAGAGGTGGAAACCGGTC+CGG - chr1.2:48778407-48778426 None:intergenic 55.0%
AGAGGTGGAAGGTCTTCGGA+CGG - chr1.2:48778191-48778210 None:intergenic 55.0%
AGGTCTTCGGACGGTGAGTT+TGG - chr1.2:48778182-48778201 None:intergenic 55.0%
ATCATCGCCGCTACAGGTAC+CGG + chr1.2:48778370-48778389 MS.gene029808:CDS 55.0%
CCACTCGATCGTTTCACCGT+CGG - chr1.2:48778326-48778345 None:intergenic 55.0%
CGATCGTTTCACCGTCGGAA+CGG - chr1.2:48778321-48778340 None:intergenic 55.0%
GACAGTTCCGGTACCTGTAG+CGG - chr1.2:48778380-48778399 None:intergenic 55.0%
GACCGTCACACCAAGGTCAA+CGG + chr1.2:48778223-48778242 MS.gene029808:CDS 55.0%
GTTCAGCCTGTGACGACTGT+TGG + chr1.2:48778466-48778485 MS.gene029808:CDS 55.0%
TGTTACGGCGGTGGAAGGTT+TGG - chr1.2:48778125-48778144 None:intergenic 55.0%
TTCCAGCTCACACGTGAGCT+AGG + chr1.2:48778292-48778311 MS.gene029808:CDS 55.0%
! CTTTTGCAACCGTCGACCAC+GGG + chr1.2:48778625-48778644 MS.gene029808:CDS 55.0%
! GCTTTTGCAACCGTCGACCA+CGG + chr1.2:48778624-48778643 MS.gene029808:CDS 55.0%
! TTTTGCAACCGTCGACCACG+GGG + chr1.2:48778626-48778645 MS.gene029808:CDS 55.0%
!! CGGACGGTGAGTTTGGTGTT+GGG - chr1.2:48778175-48778194 None:intergenic 55.0%
!! TAAGTCTTCCTCGGTGCCGT+CGG + chr1.2:48778432-48778451 MS.gene029808:CDS 55.0%
!! TCGGACGGTGAGTTTGGTGT+TGG - chr1.2:48778176-48778195 None:intergenic 55.0%
!! TTGTTGATTCTCCTCCCCCG+TGG - chr1.2:48778644-48778663 None:intergenic 55.0%
ACAAGAAACCGACGGCACCG+AGG - chr1.2:48778443-48778462 None:intergenic 60.0%
AGAGTGGCGGCATACGGACA+CGG - chr1.2:48778258-48778277 None:intergenic 60.0%
ATTCTAGCGGCGCAGAGTGG+CGG - chr1.2:48778271-48778290 None:intergenic 60.0%
CCGACGGTGAAACGATCGAG+TGG + chr1.2:48778323-48778342 MS.gene029808:CDS 60.0%
CCGGCTGAGACAGGTCAAGA+CGG - chr1.2:48778549-48778568 None:intergenic 60.0%
CCGTCTTGACCTGTCTCAGC+CGG + chr1.2:48778546-48778565 MS.gene029808:CDS 60.0%
CCTGTAGCGGCGATGATCGA+CGG - chr1.2:48778367-48778386 None:intergenic 60.0%
CCTGTGACGACTGTTGGTCC+CGG + chr1.2:48778472-48778491 MS.gene029808:CDS 60.0%
GACAGGTCAAGACGGCAGCT+CGG - chr1.2:48778541-48778560 None:intergenic 60.0%
GACCTAGCTCACGTGTGAGC+TGG - chr1.2:48778297-48778316 None:intergenic 60.0%
GAGCTAGGTCACCGTTCCGA+CGG + chr1.2:48778307-48778326 MS.gene029808:CDS 60.0%
GGTGGCGACGGTGGTTGTTA+CGG - chr1.2:48778140-48778159 None:intergenic 60.0%
GTGGTTGTTACGGCGGTGGA+AGG - chr1.2:48778130-48778149 None:intergenic 60.0%
GTTGGGATCGGAAGAGGTGG+TGG - chr1.2:48778158-48778177 None:intergenic 60.0%
TCTTGACCTGTCTCAGCCGG+CGG + chr1.2:48778549-48778568 MS.gene029808:CDS 60.0%
TGGATTACGGCACGGCGAGT+AGG + chr1.2:48778575-48778594 MS.gene029808:CDS 60.0%
TTTGCAACCGTCGACCACGG+GGG + chr1.2:48778627-48778646 MS.gene029808:CDS 60.0%
! ATCGGAAGAGGTGGTGGCGA+CGG - chr1.2:48778152-48778171 None:intergenic 60.0%
! CGGTGGGGGGATTTTCGGTA+TGG + chr1.2:48778495-48778514 MS.gene029808:CDS 60.0%
! GGCCGTTGACCTTGGTGTGA+CGG - chr1.2:48778228-48778247 None:intergenic 60.0%
! GGTGTTGGGATCGGAAGAGG+TGG - chr1.2:48778161-48778180 None:intergenic 60.0%
ACCGAAAATCCCCCCACCGC+CGG - chr1.2:48778494-48778513 None:intergenic 65.0%
AGAGGTGGAAACCGGTCCGG+CGG - chr1.2:48778404-48778423 None:intergenic 65.0%
CACACCAAGGTCAACGGCCG+TGG + chr1.2:48778229-48778248 MS.gene029808:CDS 65.0%
CAGCTCGGCTGTTGCATCGG+CGG - chr1.2:48778526-48778545 None:intergenic 65.0%
CCGGGACCAACAGTCGTCAC+AGG - chr1.2:48778475-48778494 None:intergenic 65.0%
CCGTCGATCATCGCCGCTAC+AGG + chr1.2:48778364-48778383 MS.gene029808:CDS 65.0%
CGGCAGCTCGGCTGTTGCAT+CGG - chr1.2:48778529-48778548 None:intergenic 65.0%
CTTGACCTGTCTCAGCCGGC+GGG + chr1.2:48778550-48778569 MS.gene029808:CDS 65.0%
GACGGTGGTTGTTACGGCGG+TGG - chr1.2:48778134-48778153 None:intergenic 65.0%
GGCGACGGTGGTTGTTACGG+CGG - chr1.2:48778137-48778156 None:intergenic 65.0%
GTGACGACTGTTGGTCCCGG+CGG + chr1.2:48778475-48778494 MS.gene029808:CDS 65.0%
GTGCCGTAATCCATCCCCGC+CGG - chr1.2:48778568-48778587 None:intergenic 65.0%
TTCTCCTCCCCCGTGGTCGA+CGG - chr1.2:48778637-48778656 None:intergenic 65.0%
TTGACCTGTCTCAGCCGGCG+GGG + chr1.2:48778551-48778570 MS.gene029808:CDS 65.0%
!! CAGCCGGCGGGGATGGATTA+CGG + chr1.2:48778562-48778581 MS.gene029808:CDS 65.0%
!! GGCGGGGATGGATTACGGCA+CGG + chr1.2:48778567-48778586 MS.gene029808:CDS 65.0%
ACGACTGTTGGTCCCGGCGG+TGG + chr1.2:48778478-48778497 MS.gene029808:CDS 70.0%
ACTGTTGGTCCCGGCGGTGG+GGG + chr1.2:48778481-48778500 MS.gene029808:CDS 70.0%
AGGTGGAAACCGGTCCGGCG+GGG - chr1.2:48778402-48778421 None:intergenic 70.0%
CCGAAAATCCCCCCACCGCC+GGG - chr1.2:48778493-48778512 None:intergenic 70.0%
CGACTGTTGGTCCCGGCGGT+GGG + chr1.2:48778479-48778498 MS.gene029808:CDS 70.0%
CGGCGCAGAGTGGCGGCATA+CGG - chr1.2:48778264-48778283 None:intergenic 70.0%
GACTGTTGGTCCCGGCGGTG+GGG + chr1.2:48778480-48778499 MS.gene029808:CDS 70.0%
GAGGTGGAAACCGGTCCGGC+GGG - chr1.2:48778403-48778422 None:intergenic 70.0%
GCATACGGACACGGCGGCCA+CGG - chr1.2:48778249-48778268 None:intergenic 70.0%
GTGGCGGCATACGGACACGG+CGG - chr1.2:48778255-48778274 None:intergenic 70.0%
! CCCGGCGGTGGGGGGATTTT+CGG + chr1.2:48778490-48778509 MS.gene029808:CDS 70.0%
! GGAAGAGGTGGTGGCGACGG+TGG - chr1.2:48778149-48778168 None:intergenic 70.0%
! GGTACCGGAACTGTCCCCGC+CGG + chr1.2:48778385-48778404 MS.gene029808:CDS 70.0%
CCTGTCTCAGCCGGCGGGGA+TGG + chr1.2:48778555-48778574 MS.gene029808:CDS 75.0%
CGGAACTGTCCCCGCCGGAC+CGG + chr1.2:48778390-48778409 MS.gene029808:CDS 75.0%
CGGTCCGGCGGGGACAGTTC+CGG - chr1.2:48778392-48778411 None:intergenic 75.0%
CTGTTGGTCCCGGCGGTGGG+GGG + chr1.2:48778482-48778501 MS.gene029808:CDS 75.0%
GCAACCGTCGACCACGGGGG+AGG + chr1.2:48778630-48778649 MS.gene029808:CDS 75.0%
GCGGCCACGGCCGTTGACCT+TGG - chr1.2:48778236-48778255 None:intergenic 75.0%
! CCATCCCCGCCGGCTGAGAC+AGG - chr1.2:48778558-48778577 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 48778070 48778690 48778070 ID=MS.gene029808
chr1.2 mRNA 48778070 48778690 48778070 ID=MS.gene029808.t1;Parent=MS.gene029808
chr1.2 exon 48778070 48778690 48778070 ID=MS.gene029808.t1.exon1;Parent=MS.gene029808.t1
chr1.2 CDS 48778070 48778690 48778070 ID=cds.MS.gene029808.t1;Parent=MS.gene029808.t1
Gene Sequence

>MS.gene029808

ATGTCTTCATCAGAGGTAGTTATCCACACATTCTCTCAAACCCAATCAGAAACCAAACCTTCCACCGCCGTAACAACCACCGTCGCCACCACCTCTTCCGATCCCAACACCAAACTCACCGTCCGAAGACCTTCCACCTCTCGATCCACTAAAGACCGTCACACCAAGGTCAACGGCCGTGGCCGCCGTGTCCGTATGCCGCCACTCTGCGCCGCTAGAATCTTCCAGCTCACACGTGAGCTAGGTCACCGTTCCGACGGTGAAACGATCGAGTGGCTTCTTCGTCATGCTGAGCCGTCGATCATCGCCGCTACAGGTACCGGAACTGTCCCCGCCGGACCGGTTTCCACCTCTTCTCCGTTTAAGTCTTCCTCGGTGCCGTCGGTTTCTTGTCATGTTCAGCCTGTGACGACTGTTGGTCCCGGCGGTGGGGGGATTTTCGGTATGGCTTTGCCGCCGATGCAACAGCCGAGCTGCCGTCTTGACCTGTCTCAGCCGGCGGGGATGGATTACGGCACGGCGAGTAGGTATCGTCATATGCCGTTCACGTCGCTGCTTTTGCAACCGTCGACCACGGGGGAGGAGAATCAACAAGAAGAAGAAGCTCTTAACGAACAATGA
Protein sequence

>MS.gene029808.t1

MSSSEVVIHTFSQTQSETKPSTAVTTTVATTSSDPNTKLTVRRPSTSRSTKDRHTKVNGRGRRVRMPPLCAARIFQLTRELGHRSDGETIEWLLRHAEPSIIAATGTGTVPAGPVSTSSPFKSSSVPSVSCHVQPVTTVGPGGGGIFGMALPPMQQPSCRLDLSQPAGMDYGTASRYRHMPFTSLLLQPSTTGEENQQEEEALNEQ