Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02996.t1 | XP_024636633.1 | 78.9 | 736 | 17 | 1 | 1 | 598 | 1 | 736 | 0.00E+00 | 1137.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02996.t1 | Q9SWG3 | 36.1 | 710 | 287 | 7 | 3 | 560 | 8 | 702 | 1.5e-120 | 434.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02996.t1 | A0A2K3NBU0 | 63.1 | 702 | 117 | 3 | 4 | 567 | 3 | 700 | 2.5e-246 | 860.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene02996.t1 | TF | FAR1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02996.t1 | MTR_1g008290 | 69.286 | 140 | 40 | 1 | 94 | 233 | 8 | 144 | 7.03e-67 | 214 |
| MS.gene02996.t1 | MTR_5g032260 | 64.486 | 107 | 38 | 0 | 68 | 174 | 299 | 405 | 5.76e-39 | 148 |
| MS.gene02996.t1 | MTR_4g035820 | 27.960 | 397 | 257 | 10 | 2 | 374 | 33 | 424 | 7.71e-31 | 128 |
| MS.gene02996.t1 | MTR_1g070355 | 27.413 | 259 | 166 | 8 | 4 | 248 | 36 | 286 | 4.00e-22 | 100 |
| MS.gene02996.t1 | MTR_5g076070 | 27.237 | 257 | 157 | 10 | 25 | 264 | 33 | 276 | 2.91e-21 | 94.7 |
| MS.gene02996.t1 | MTR_6g051425 | 24.576 | 236 | 154 | 5 | 43 | 264 | 19 | 244 | 3.20e-21 | 95.9 |
| MS.gene02996.t1 | MTR_0402s0040 | 24.906 | 265 | 142 | 5 | 41 | 298 | 26 | 240 | 9.12e-21 | 96.3 |
| MS.gene02996.t1 | MTR_7g446520 | 28.685 | 251 | 149 | 7 | 10 | 251 | 58 | 287 | 1.75e-20 | 93.6 |
| MS.gene02996.t1 | MTR_2g098880 | 35.849 | 106 | 62 | 1 | 40 | 139 | 60 | 165 | 3.68e-18 | 84.7 |
| MS.gene02996.t1 | MTR_2g098880 | 35.849 | 106 | 62 | 1 | 40 | 139 | 72 | 177 | 4.26e-18 | 85.1 |
| MS.gene02996.t1 | MTR_1g013060 | 29.808 | 208 | 135 | 6 | 40 | 237 | 23 | 229 | 1.92e-16 | 79.3 |
| MS.gene02996.t1 | MTR_7g446480 | 33.858 | 127 | 83 | 1 | 123 | 248 | 151 | 277 | 3.08e-16 | 80.5 |
| MS.gene02996.t1 | MTR_7g446510 | 32.308 | 130 | 87 | 1 | 123 | 251 | 166 | 295 | 1.31e-15 | 79.0 |
| MS.gene02996.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 48 | 159 | 7.56e-15 | 74.7 |
| MS.gene02996.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 48 | 159 | 8.03e-15 | 74.7 |
| MS.gene02996.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 68 | 179 | 9.23e-15 | 75.1 |
| MS.gene02996.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 68 | 179 | 9.98e-15 | 74.7 |
| MS.gene02996.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 66 | 177 | 1.04e-14 | 74.7 |
| MS.gene02996.t1 | MTR_4g067290 | 34.513 | 113 | 69 | 2 | 33 | 141 | 108 | 219 | 1.85e-14 | 74.7 |
| MS.gene02996.t1 | MTR_3g006370 | 33.945 | 109 | 67 | 1 | 36 | 139 | 45 | 153 | 3.47e-14 | 72.8 |
| MS.gene02996.t1 | MTR_2g098920 | 32.639 | 144 | 83 | 3 | 11 | 141 | 41 | 183 | 5.01e-13 | 70.1 |
| MS.gene02996.t1 | MTR_7g446060 | 35.294 | 85 | 55 | 0 | 122 | 206 | 6 | 90 | 1.73e-11 | 62.4 |
| MS.gene02996.t1 | MTR_5g015480 | 32.000 | 125 | 79 | 3 | 41 | 159 | 56 | 180 | 4.05e-11 | 64.3 |
| MS.gene02996.t1 | MTR_8g465780 | 33.981 | 103 | 67 | 1 | 270 | 371 | 1 | 103 | 7.06e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene02996.t1 | AT4G15090 | 42.090 | 354 | 184 | 6 | 217 | 560 | 360 | 702 | 2.97e-84 | 280 |
| MS.gene02996.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
| MS.gene02996.t1 | AT4G15090 | 42.090 | 354 | 184 | 6 | 217 | 560 | 360 | 702 | 2.97e-84 | 280 |
| MS.gene02996.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
| MS.gene02996.t1 | AT4G15090 | 42.090 | 354 | 184 | 6 | 217 | 560 | 360 | 702 | 2.97e-84 | 280 |
| MS.gene02996.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
| MS.gene02996.t1 | AT4G15090 | 42.090 | 354 | 184 | 6 | 217 | 560 | 360 | 702 | 2.97e-84 | 280 |
| MS.gene02996.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
| MS.gene02996.t1 | AT4G15090 | 42.090 | 354 | 184 | 6 | 217 | 560 | 360 | 702 | 2.97e-84 | 280 |
| MS.gene02996.t1 | AT4G15090 | 44.487 | 263 | 128 | 4 | 3 | 251 | 8 | 266 | 1.28e-62 | 221 |
| MS.gene02996.t1 | AT3G22170 | 46.667 | 270 | 143 | 1 | 247 | 516 | 409 | 677 | 2.00e-80 | 270 |
| MS.gene02996.t1 | AT3G22170 | 40.684 | 263 | 109 | 4 | 14 | 251 | 35 | 275 | 1.19e-53 | 196 |
| MS.gene02996.t1 | AT3G22170 | 46.667 | 270 | 143 | 1 | 247 | 516 | 409 | 677 | 2.00e-80 | 270 |
| MS.gene02996.t1 | AT3G22170 | 40.684 | 263 | 109 | 4 | 14 | 251 | 35 | 275 | 1.19e-53 | 196 |
| MS.gene02996.t1 | AT1G76320 | 45.522 | 268 | 144 | 1 | 251 | 518 | 341 | 606 | 2.18e-77 | 259 |
| MS.gene02996.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 1.50e-52 | 191 |
| MS.gene02996.t1 | AT1G76320 | 45.522 | 268 | 144 | 1 | 251 | 518 | 341 | 606 | 2.48e-77 | 260 |
| MS.gene02996.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 1.93e-52 | 192 |
| MS.gene02996.t1 | AT1G76320 | 45.522 | 268 | 144 | 1 | 251 | 518 | 341 | 606 | 2.74e-77 | 260 |
| MS.gene02996.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 1.99e-52 | 192 |
| MS.gene02996.t1 | AT1G76320 | 45.522 | 268 | 144 | 1 | 251 | 518 | 341 | 606 | 2.74e-77 | 260 |
| MS.gene02996.t1 | AT1G76320 | 43.891 | 221 | 113 | 3 | 45 | 264 | 1 | 211 | 1.99e-52 | 192 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 291 | 556 | 6.84e-62 | 217 |
| MS.gene02996.t1 | AT4G19990 | 30.729 | 192 | 81 | 3 | 78 | 252 | 1 | 157 | 6.89e-20 | 94.4 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 348 | 613 | 1.22e-61 | 218 |
| MS.gene02996.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 2.40e-32 | 133 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 348 | 613 | 1.22e-61 | 218 |
| MS.gene02996.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 2.40e-32 | 133 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 348 | 613 | 1.55e-61 | 217 |
| MS.gene02996.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 2.81e-32 | 133 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 348 | 613 | 2.04e-61 | 218 |
| MS.gene02996.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 3.67e-32 | 132 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 348 | 613 | 2.04e-61 | 218 |
| MS.gene02996.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 20 | 214 | 3.67e-32 | 132 |
| MS.gene02996.t1 | AT4G19990 | 44.361 | 266 | 145 | 2 | 247 | 509 | 362 | 627 | 2.36e-61 | 217 |
| MS.gene02996.t1 | AT4G19990 | 34.783 | 230 | 98 | 3 | 40 | 252 | 34 | 228 | 2.57e-32 | 133 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 9.80e-55 | 199 |
| MS.gene02996.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.26e-37 | 149 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 9.80e-55 | 199 |
| MS.gene02996.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.26e-37 | 149 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 1.03e-54 | 199 |
| MS.gene02996.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.24e-37 | 149 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 1.03e-54 | 199 |
| MS.gene02996.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.24e-37 | 149 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 1.03e-54 | 199 |
| MS.gene02996.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.24e-37 | 149 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 317 | 619 | 1.06e-54 | 198 |
| MS.gene02996.t1 | AT2G32250 | 43.541 | 209 | 78 | 4 | 44 | 251 | 41 | 210 | 1.19e-37 | 149 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 276 | 578 | 1.25e-54 | 198 |
| MS.gene02996.t1 | AT2G32250 | 43.269 | 208 | 78 | 4 | 45 | 251 | 1 | 169 | 8.90e-37 | 146 |
| MS.gene02996.t1 | AT2G32250 | 36.508 | 315 | 182 | 5 | 214 | 522 | 276 | 578 | 1.30e-54 | 198 |
| MS.gene02996.t1 | AT2G32250 | 43.269 | 208 | 78 | 4 | 45 | 251 | 1 | 169 | 8.64e-37 | 146 |
| MS.gene02996.t1 | AT4G38180 | 35.018 | 277 | 169 | 3 | 252 | 522 | 429 | 700 | 7.16e-52 | 191 |
| MS.gene02996.t1 | AT4G38180 | 36.481 | 233 | 134 | 4 | 40 | 264 | 72 | 298 | 9.54e-37 | 146 |
| MS.gene02996.t1 | AT2G27110 | 35.766 | 274 | 167 | 4 | 249 | 517 | 228 | 497 | 5.71e-50 | 184 |
| MS.gene02996.t1 | AT2G27110 | 36.162 | 271 | 164 | 4 | 252 | 517 | 376 | 642 | 1.23e-49 | 185 |
| MS.gene02996.t1 | AT2G27110 | 28.571 | 217 | 129 | 6 | 37 | 251 | 45 | 237 | 2.49e-19 | 92.8 |
| MS.gene02996.t1 | AT2G27110 | 36.162 | 271 | 164 | 4 | 252 | 517 | 376 | 642 | 1.23e-49 | 185 |
| MS.gene02996.t1 | AT2G27110 | 28.571 | 217 | 129 | 6 | 37 | 251 | 45 | 237 | 2.49e-19 | 92.8 |
| MS.gene02996.t1 | AT1G52520 | 35.000 | 280 | 170 | 4 | 246 | 513 | 419 | 698 | 2.09e-48 | 180 |
| MS.gene02996.t1 | AT1G52520 | 30.385 | 260 | 162 | 4 | 2 | 251 | 38 | 288 | 1.30e-26 | 115 |
| MS.gene02996.t1 | AT4G38170 | 35.075 | 268 | 162 | 6 | 252 | 511 | 194 | 457 | 1.10e-45 | 170 |
| MS.gene02996.t1 | AT1G80010 | 32.342 | 269 | 169 | 5 | 252 | 511 | 450 | 714 | 5.86e-37 | 147 |
| MS.gene02996.t1 | AT1G80010 | 32.759 | 232 | 142 | 4 | 41 | 264 | 95 | 320 | 3.11e-27 | 117 |
| MS.gene02996.t1 | AT3G06250 | 32.090 | 268 | 174 | 4 | 246 | 509 | 496 | 759 | 2.00e-33 | 136 |
| MS.gene02996.t1 | AT3G06250 | 27.888 | 251 | 130 | 5 | 18 | 252 | 152 | 367 | 8.11e-21 | 97.4 |
| MS.gene02996.t1 | AT3G06250 | 32.381 | 105 | 62 | 1 | 34 | 138 | 21 | 116 | 4.01e-11 | 66.6 |
| MS.gene02996.t1 | AT3G06250 | 32.090 | 268 | 174 | 4 | 246 | 509 | 496 | 759 | 2.00e-33 | 136 |
| MS.gene02996.t1 | AT3G06250 | 27.888 | 251 | 130 | 5 | 18 | 252 | 152 | 367 | 8.11e-21 | 97.4 |
| MS.gene02996.t1 | AT3G06250 | 32.381 | 105 | 62 | 1 | 34 | 138 | 21 | 116 | 4.01e-11 | 66.6 |
| MS.gene02996.t1 | AT3G06250 | 32.090 | 268 | 174 | 4 | 246 | 509 | 496 | 759 | 2.00e-33 | 136 |
| MS.gene02996.t1 | AT3G06250 | 27.888 | 251 | 130 | 5 | 18 | 252 | 152 | 367 | 8.11e-21 | 97.4 |
| MS.gene02996.t1 | AT3G06250 | 32.381 | 105 | 62 | 1 | 34 | 138 | 21 | 116 | 4.01e-11 | 66.6 |
| MS.gene02996.t1 | AT5G18960 | 31.716 | 268 | 175 | 4 | 246 | 509 | 520 | 783 | 2.76e-33 | 136 |
| MS.gene02996.t1 | AT5G18960 | 28.632 | 234 | 130 | 5 | 22 | 252 | 192 | 391 | 5.30e-20 | 94.7 |
| MS.gene02996.t1 | AT5G18960 | 32.773 | 119 | 71 | 1 | 20 | 138 | 22 | 131 | 5.82e-13 | 72.4 |
| MS.gene02996.t1 | AT5G18960 | 31.716 | 268 | 175 | 4 | 246 | 509 | 520 | 783 | 2.76e-33 | 136 |
| MS.gene02996.t1 | AT5G18960 | 28.632 | 234 | 130 | 5 | 22 | 252 | 192 | 391 | 5.30e-20 | 94.7 |
| MS.gene02996.t1 | AT5G18960 | 32.773 | 119 | 71 | 1 | 20 | 138 | 22 | 131 | 5.82e-13 | 72.4 |
| MS.gene02996.t1 | AT1G10240 | 27.723 | 202 | 142 | 1 | 252 | 453 | 407 | 604 | 1.35e-21 | 99.8 |
| MS.gene02996.t1 | AT1G10240 | 27.165 | 254 | 161 | 9 | 24 | 264 | 34 | 276 | 1.88e-19 | 92.8 |
| MS.gene02996.t1 | AT1G10240 | 27.723 | 202 | 142 | 1 | 252 | 453 | 407 | 604 | 1.35e-21 | 99.8 |
| MS.gene02996.t1 | AT1G10240 | 27.165 | 254 | 161 | 9 | 24 | 264 | 34 | 276 | 1.88e-19 | 92.8 |
| MS.gene02996.t1 | AT3G07500 | 38.235 | 136 | 77 | 3 | 12 | 140 | 1 | 136 | 4.41e-16 | 78.2 |
| MS.gene02996.t1 | AT3G59470 | 32.117 | 137 | 87 | 3 | 8 | 141 | 40 | 173 | 1.15e-15 | 77.8 |
| MS.gene02996.t1 | AT3G59470 | 32.117 | 137 | 87 | 3 | 8 | 141 | 40 | 173 | 1.15e-15 | 77.8 |
| MS.gene02996.t1 | AT3G59470 | 32.117 | 137 | 87 | 3 | 8 | 141 | 52 | 185 | 1.40e-15 | 77.4 |
| MS.gene02996.t1 | AT5G28530 | 25.101 | 247 | 152 | 10 | 41 | 264 | 55 | 291 | 7.95e-14 | 75.1 |
| MS.gene02996.t1 | AT5G28530 | 27.064 | 218 | 130 | 5 | 249 | 454 | 419 | 619 | 2.12e-13 | 73.9 |
| MS.gene02996.t1 | AT5G28530 | 25.101 | 247 | 152 | 10 | 41 | 264 | 55 | 291 | 8.79e-14 | 75.1 |
| MS.gene02996.t1 | AT5G28530 | 26.147 | 218 | 128 | 5 | 249 | 454 | 419 | 615 | 1.82e-12 | 70.9 |
| MS.gene02996.t1 | AT5G28530 | 25.101 | 247 | 152 | 10 | 41 | 264 | 55 | 291 | 8.79e-14 | 75.1 |
| MS.gene02996.t1 | AT5G28530 | 26.147 | 218 | 128 | 5 | 249 | 454 | 419 | 615 | 1.82e-12 | 70.9 |
| MS.gene02996.t1 | AT2G43280 | 32.692 | 104 | 65 | 1 | 40 | 138 | 21 | 124 | 1.22e-13 | 70.5 |
| MS.gene02996.t1 | AT5G28530 | 27.064 | 218 | 130 | 5 | 249 | 454 | 356 | 556 | 1.47e-13 | 74.3 |
| MS.gene02996.t1 | AT4G12850 | 35.455 | 110 | 67 | 2 | 30 | 138 | 3 | 109 | 1.52e-13 | 68.6 |
| MS.gene02996.t1 | AT4G12850 | 36.000 | 100 | 63 | 1 | 40 | 138 | 10 | 109 | 2.54e-13 | 67.8 |
| MS.gene02996.t1 | AT4G12850 | 36.000 | 100 | 63 | 1 | 40 | 138 | 10 | 109 | 3.21e-13 | 68.9 |
| MS.gene02996.t1 | AT5G28530 | 25.688 | 218 | 129 | 5 | 249 | 454 | 356 | 552 | 1.07e-12 | 71.2 |
Find 89 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCCCACTCTTTATTCTTCT+TGG | 0.122394 | 1.3:-62694988 | None:intergenic |
| AAAATATAAAGTTGCTTTAC+AGG | 0.207491 | 1.3:+62694306 | MS.gene02996:CDS |
| AACGCCGATCTTTATCTAAA+TGG | 0.218779 | 1.3:-62693526 | None:intergenic |
| GAAATTTCAAGTTGAAGTTT+TGG | 0.239158 | 1.3:+62694447 | MS.gene02996:CDS |
| TTCATATCCTCCATATTCTT+TGG | 0.259642 | 1.3:-62693471 | None:intergenic |
| AAAGAATCTGTGATGGAAAA+TGG | 0.261591 | 1.3:+62693291 | MS.gene02996:CDS |
| TATGCTAAGTCAGTTGGATT+TGG | 0.280799 | 1.3:+62693116 | MS.gene02996:CDS |
| TTCATGTACCGTTGATTTAG+AGG | 0.293148 | 1.3:+62693019 | MS.gene02996:CDS |
| CGGCGTTTGGCTTTAGAATC+AGG | 0.298007 | 1.3:+62693542 | MS.gene02996:CDS |
| GCCACAATGGCCAAAGAATA+TGG | 0.298617 | 1.3:+62693461 | MS.gene02996:CDS |
| GAGCTTTATTGATTCCTCTA+TGG | 0.299611 | 1.3:-62693382 | None:intergenic |
| ATGTAAGAAAACTACATTAA+AGG | 0.307863 | 1.3:+62694273 | MS.gene02996:CDS |
| TTGATCTATTTGGAGATGAT+TGG | 0.321918 | 1.3:+62694128 | MS.gene02996:CDS |
| ATAATGTGTCATACCATTCT+TGG | 0.328571 | 1.3:-62695215 | None:intergenic |
| TCAAACTCCATTCCAATGTT+AGG | 0.334083 | 1.3:-62693059 | None:intergenic |
| TTGATGGCATTCCAAGCTAT+TGG | 0.348151 | 1.3:+62694643 | MS.gene02996:CDS |
| ATGCTAAGTCAGTTGGATTT+GGG | 0.354359 | 1.3:+62693117 | MS.gene02996:CDS |
| AGGTATTTACTGCTTCTCTT+TGG | 0.367389 | 1.3:-62695157 | None:intergenic |
| AATGTATCATTCATGTAAAC+AGG | 0.389787 | 1.3:-62694187 | None:intergenic |
| GGCACAAGCAACCTGTTCTT+AGG | 0.392197 | 1.3:+62694368 | MS.gene02996:CDS |
| GCTATTGAATTTCTCGAAGA+AGG | 0.413131 | 1.3:+62694796 | MS.gene02996:CDS |
| AGAAGATGTGTGTTCTAGTA+AGG | 0.417067 | 1.3:+62694747 | MS.gene02996:CDS |
| CCTAAAAGAGCAAATACAAA+AGG | 0.426549 | 1.3:+62694961 | MS.gene02996:CDS |
| AATGGAGAACATTCTATTGA+TGG | 0.437522 | 1.3:+62692957 | MS.gene02996:CDS |
| ATGCTTGCTTCTAACATCCT+TGG | 0.437672 | 1.3:-62694707 | None:intergenic |
| ATTGACATTTGCTTCTCAAA+AGG | 0.437914 | 1.3:-62694400 | None:intergenic |
| TTTAGATAAAGATCGGCGTT+TGG | 0.438381 | 1.3:+62693529 | MS.gene02996:CDS |
| ATATGATTCTTTATATCAAA+AGG | 0.443423 | 1.3:+62694774 | MS.gene02996:CDS |
| TCTTTGTAGACATTCATTGA+TGG | 0.446762 | 1.3:+62694627 | MS.gene02996:CDS |
| ATATGAAGAACGTGAACATT+GGG | 0.447625 | 1.3:+62694162 | MS.gene02996:CDS |
| GGAAAATAATGTGCATATGC+TGG | 0.447627 | 1.3:-62693356 | None:intergenic |
| GAATTAATGGAAGTTGTTGA+TGG | 0.448629 | 1.3:+62692933 | None:intergenic |
| ATATGAAAACATTGGTTGCT+TGG | 0.449564 | 1.3:+62693487 | MS.gene02996:CDS |
| TTCACCATTGAGAACATTTG+AGG | 0.450893 | 1.3:-62695177 | None:intergenic |
| AACAACAATTTGAAGATAAG+TGG | 0.469819 | 1.3:+62694086 | MS.gene02996:intron |
| TCCATATTCTTTGGCCATTG+TGG | 0.472191 | 1.3:-62693462 | None:intergenic |
| AGGAAAGTCATCAGGGTTGA+AGG | 0.473626 | 1.3:+62695315 | MS.gene02996:intron |
| TCAATTGCATAAAAGAATCC+TGG | 0.481905 | 1.3:-62693614 | None:intergenic |
| AACAGCTGCATTGCCAAGAA+TGG | 0.484562 | 1.3:+62695202 | MS.gene02996:CDS |
| AACAATGTGCAACTATCAAC+CGG | 0.485541 | 1.3:+62694875 | MS.gene02996:CDS |
| TTCTTAAAATATAGTGTGAT+GGG | 0.486629 | 1.3:-62694678 | None:intergenic |
| GGTGATGGAGTCCTAAGAAC+AGG | 0.491171 | 1.3:-62694379 | None:intergenic |
| CTAAAAGAGCAAATACAAAA+GGG | 0.494734 | 1.3:+62694962 | MS.gene02996:CDS |
| ACTCATTATGCTAAGTCAGT+TGG | 0.500199 | 1.3:+62693110 | MS.gene02996:CDS |
| AGGAGATGCAAATGCAATGT+TGG | 0.501317 | 1.3:+62693562 | MS.gene02996:CDS |
| ATGGAAGTTGTTGATGGGAA+TGG | 0.507690 | 1.3:+62692939 | MS.gene02996:CDS |
| AATACCTCAAATGTTCTCAA+TGG | 0.509038 | 1.3:+62695173 | MS.gene02996:CDS |
| TGAAGATAAGTGGCATGAAA+TGG | 0.513482 | 1.3:+62694096 | MS.gene02996:intron |
| AGTTATGCTTGCACAAGATA+CGG | 0.514711 | 1.3:+62693194 | MS.gene02996:CDS |
| TCAAAGTTTCTTCAAGTGCA+TGG | 0.515683 | 1.3:-62694852 | None:intergenic |
| TATATGAAGAACGTGAACAT+TGG | 0.518179 | 1.3:+62694161 | MS.gene02996:CDS |
| AAATCCACGTCCTTGTTTGA+AGG | 0.523815 | 1.3:+62693241 | MS.gene02996:CDS |
| CTTCTTAAAATATAGTGTGA+TGG | 0.527660 | 1.3:-62694679 | None:intergenic |
| ATTGAAACTTTGCACCATGT+TGG | 0.528985 | 1.3:+62693416 | MS.gene02996:CDS |
| CGTGTTAAAAGAATCTGTGA+TGG | 0.532867 | 1.3:+62693284 | MS.gene02996:CDS |
| TGCTTGTTCTCACTCCAACA+TGG | 0.537475 | 1.3:-62693430 | None:intergenic |
| ATTTGCTTCTCAAAAGGTGA+TGG | 0.540522 | 1.3:-62694394 | None:intergenic |
| CAACACAGACACCAATAGCT+TGG | 0.542350 | 1.3:-62694654 | None:intergenic |
| TCCACGTCCTTGTTTGAAGG+TGG | 0.544839 | 1.3:+62693244 | MS.gene02996:CDS |
| AATTAATGGAAGTTGTTGAT+GGG | 0.547188 | 1.3:+62692934 | None:intergenic |
| GAAACCATTTAGATAAAGAT+CGG | 0.550718 | 1.3:+62693522 | MS.gene02996:CDS |
| TTATTGATTCCTCTATGGCA+AGG | 0.554774 | 1.3:-62693377 | None:intergenic |
| ATGGAGAACATTCTATTGAT+GGG | 0.556834 | 1.3:+62692958 | MS.gene02996:CDS |
| TATGGAGGATATGAAAACAT+TGG | 0.557417 | 1.3:+62693479 | MS.gene02996:CDS |
| CCACGTCCTTGTTTGAAGGT+GGG | 0.564321 | 1.3:+62693245 | MS.gene02996:CDS |
| AGGATAGAGAAGAGGCGGAA+AGG | 0.566665 | 1.3:+62694326 | MS.gene02996:CDS |
| AGAGTGTGATGTCTCGAAGA+AGG | 0.573703 | 1.3:+62694564 | MS.gene02996:CDS |
| TGCTTTACAGGATAGAGAAG+AGG | 0.576377 | 1.3:+62694318 | MS.gene02996:CDS |
| TGCAATTGATATGGATGATG+AGG | 0.581691 | 1.3:+62693628 | MS.gene02996:CDS |
| TTGTTTGAAGGTGGGATGTG+AGG | 0.585943 | 1.3:+62693253 | MS.gene02996:CDS |
| CCCACCTTCAAACAAGGACG+TGG | 0.589716 | 1.3:-62693245 | None:intergenic |
| TCACATCCCACCTTCAAACA+AGG | 0.596792 | 1.3:-62693251 | None:intergenic |
| TCAAGAACCTAACATTGGAA+TGG | 0.600467 | 1.3:+62693052 | MS.gene02996:CDS |
| ATAAAGAGTGGGATCGAGAG+AGG | 0.602973 | 1.3:+62694997 | MS.gene02996:CDS |
| GGTGGTCAAGAACCTAACAT+TGG | 0.606305 | 1.3:+62693047 | MS.gene02996:CDS |
| AGATAAGTGGCATGAAATGG+TGG | 0.607920 | 1.3:+62694099 | MS.gene02996:intron |
| GAATGAAGAGCAAGTTGTCA+AGG | 0.614810 | 1.3:+62692980 | MS.gene02996:CDS |
| ACCGTTAGCCTCTAAATCAA+CGG | 0.614838 | 1.3:-62693027 | None:intergenic |
| TTAGAAGCAAGCATCATACA+AGG | 0.616240 | 1.3:+62694716 | MS.gene02996:CDS |
| AAAATCGACAAGGAAAACGT+TGG | 0.622612 | 1.3:+62694904 | MS.gene02996:CDS |
| TAAAAGAGCAAATACAAAAG+GGG | 0.623948 | 1.3:+62694963 | MS.gene02996:CDS |
| ACCGTTGATTTAGAGGCTAA+CGG | 0.628314 | 1.3:+62693026 | MS.gene02996:CDS |
| CTCCAAGAAGAATAAAGAGT+GGG | 0.644223 | 1.3:+62694986 | MS.gene02996:CDS |
| CCGGTCTTTGAAAATCGACA+AGG | 0.646121 | 1.3:+62694894 | MS.gene02996:CDS |
| TTTACAGGATAGAGAAGAGG+CGG | 0.651231 | 1.3:+62694321 | MS.gene02996:CDS |
| GCAATTGATATGGATGATGA+GGG | 0.673224 | 1.3:+62693629 | MS.gene02996:CDS |
| GCTCCAAGAAGAATAAAGAG+TGG | 0.689620 | 1.3:+62694985 | MS.gene02996:CDS |
| ACAATGGCCAAAGAATATGG+AGG | 0.745699 | 1.3:+62693464 | MS.gene02996:CDS |
| GTTGATTTAGAGGCTAACGG+TGG | 0.762259 | 1.3:+62693029 | MS.gene02996:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATGATTCTTTATATCAAA+AGG | + | chr1.3:62694774-62694793 | MS.gene02996:CDS | 15.0% |
| !! | ATCTAGTTGTAAAGTAAAAA+AGG | + | chr1.3:62695032-62695051 | MS.gene02996:CDS | 20.0% |
| !! | ATGTAAGAAAACTACATTAA+AGG | + | chr1.3:62694273-62694292 | MS.gene02996:CDS | 20.0% |
| !! | TTCTTAAAATATAGTGTGAT+GGG | - | chr1.3:62694681-62694700 | None:intergenic | 20.0% |
| !!! | AAAATATAAAGTTGCTTTAC+AGG | + | chr1.3:62694306-62694325 | MS.gene02996:CDS | 20.0% |
| !!! | AAATTTCAAGTTGAAGTTTT+GGG | + | chr1.3:62694448-62694467 | MS.gene02996:CDS | 20.0% |
| !!! | ATTCTTTTATGCAATTGATA+TGG | + | chr1.3:62693619-62693638 | MS.gene02996:CDS | 20.0% |
| !!! | TACATGAATGATACATTTTT+TGG | + | chr1.3:62694193-62694212 | MS.gene02996:CDS | 20.0% |
| !!! | TTTTGTTTTCTTATTTTCAC+AGG | + | chr1.3:62695295-62695314 | MS.gene02996:intron | 20.0% |
| ! | AACAACAATTTGAAGATAAG+TGG | + | chr1.3:62694086-62694105 | MS.gene02996:intron | 25.0% |
| ! | AATGTATCATTCATGTAAAC+AGG | - | chr1.3:62694190-62694209 | None:intergenic | 25.0% |
| ! | ACATATGCATATATAAGTCT+TGG | + | chr1.3:62694059-62694078 | MS.gene02996:intron | 25.0% |
| ! | CTAAAAGAGCAAATACAAAA+GGG | + | chr1.3:62694962-62694981 | MS.gene02996:CDS | 25.0% |
| ! | CTTCTTAAAATATAGTGTGA+TGG | - | chr1.3:62694682-62694701 | None:intergenic | 25.0% |
| ! | GAAACCATTTAGATAAAGAT+CGG | + | chr1.3:62693522-62693541 | MS.gene02996:CDS | 25.0% |
| ! | GTGGAAAAATTTGATCTATT+TGG | + | chr1.3:62694118-62694137 | MS.gene02996:CDS | 25.0% |
| ! | TAAAAGAGCAAATACAAAAG+GGG | + | chr1.3:62694963-62694982 | MS.gene02996:CDS | 25.0% |
| ! | TAAACAATCACTTTCAATCA+AGG | + | chr1.3:62693783-62693802 | MS.gene02996:intron | 25.0% |
| ! | TGATTGTTTACACCAATAAA+AGG | - | chr1.3:62693773-62693792 | None:intergenic | 25.0% |
| !! | TCGCATGAAAAATGTATTTT+GGG | + | chr1.3:62693652-62693671 | MS.gene02996:CDS | 25.0% |
| !!! | ATGAATGATACATTTTTTGG+TGG | + | chr1.3:62694196-62694215 | MS.gene02996:CDS | 25.0% |
| !!! | CACACTATATTTTAAGAAGA+TGG | + | chr1.3:62694683-62694702 | MS.gene02996:CDS | 25.0% |
| !!! | GAAATTTCAAGTTGAAGTTT+TGG | + | chr1.3:62694447-62694466 | MS.gene02996:CDS | 25.0% |
| !!! | TCATATGGTTGATGAAAATA+TGG | + | chr1.3:62693849-62693868 | MS.gene02996:intron | 25.0% |
| AAAATATGGCTTAGAGCAAT+GGG | + | chr1.3:62693863-62693882 | MS.gene02996:intron | 30.0% | |
| AATACCTCAAATGTTCTCAA+TGG | + | chr1.3:62695173-62695192 | MS.gene02996:CDS | 30.0% | |
| AATGAAAGAGGCTATTAAAG+AGG | + | chr1.3:62693928-62693947 | MS.gene02996:intron | 30.0% | |
| AATGGAGAACATTCTATTGA+TGG | + | chr1.3:62692957-62692976 | MS.gene02996:CDS | 30.0% | |
| ATAATGTGTCATACCATTCT+TGG | - | chr1.3:62695218-62695237 | None:intergenic | 30.0% | |
| ATATGAAGAACGTGAACATT+GGG | + | chr1.3:62694162-62694181 | MS.gene02996:CDS | 30.0% | |
| ATGGAGAACATTCTATTGAT+GGG | + | chr1.3:62692958-62692977 | MS.gene02996:CDS | 30.0% | |
| ATTGACATTTGCTTCTCAAA+AGG | - | chr1.3:62694403-62694422 | None:intergenic | 30.0% | |
| CCTAAAAGAGCAAATACAAA+AGG | + | chr1.3:62694961-62694980 | MS.gene02996:CDS | 30.0% | |
| TATATGAAGAACGTGAACAT+TGG | + | chr1.3:62694161-62694180 | MS.gene02996:CDS | 30.0% | |
| TATGGAGGATATGAAAACAT+TGG | + | chr1.3:62693479-62693498 | MS.gene02996:CDS | 30.0% | |
| TCAATTGCATAAAAGAATCC+TGG | - | chr1.3:62693617-62693636 | None:intergenic | 30.0% | |
| TCTTTGGCATATACTTAGAA+AGG | + | chr1.3:62693979-62693998 | MS.gene02996:intron | 30.0% | |
| TCTTTGTAGACATTCATTGA+TGG | + | chr1.3:62694627-62694646 | MS.gene02996:CDS | 30.0% | |
| TGATCAGTTATGATTGCATT+TGG | - | chr1.3:62693899-62693918 | None:intergenic | 30.0% | |
| TGGTATGACACATTATTCTT+AGG | + | chr1.3:62695222-62695241 | MS.gene02996:intron | 30.0% | |
| TTCATATCCTCCATATTCTT+TGG | - | chr1.3:62693474-62693493 | None:intergenic | 30.0% | |
| TTGATCTATTTGGAGATGAT+TGG | + | chr1.3:62694128-62694147 | MS.gene02996:CDS | 30.0% | |
| ! | AAAGAATCTGTGATGGAAAA+TGG | + | chr1.3:62693291-62693310 | MS.gene02996:CDS | 30.0% |
| ! | AAGCAAAATTTTTGCCACAA+TGG | + | chr1.3:62693448-62693467 | MS.gene02996:CDS | 30.0% |
| ! | AGAAGCTTAGTCATGTTTTA+AGG | + | chr1.3:62694008-62694027 | MS.gene02996:intron | 30.0% |
| ! | ATATGAAAACATTGGTTGCT+TGG | + | chr1.3:62693487-62693506 | MS.gene02996:CDS | 30.0% |
| ! | CCTTTTGTATTTGCTCTTTT+AGG | - | chr1.3:62694964-62694983 | None:intergenic | 30.0% |
| ! | GTCGCATGAAAAATGTATTT+TGG | + | chr1.3:62693651-62693670 | MS.gene02996:CDS | 30.0% |
| !! | CATGAAAAATGTATTTTGGG+TGG | + | chr1.3:62693655-62693674 | MS.gene02996:CDS | 30.0% |
| !! | GAAGCTTAGTCATGTTTTAA+GGG | + | chr1.3:62694009-62694028 | MS.gene02996:intron | 30.0% |
| !! | TATTTTAAGAAGATGGACCA+AGG | + | chr1.3:62694690-62694709 | MS.gene02996:CDS | 30.0% |
| !!! | GTCGCTTTTTTGAGTATAAT+GGG | + | chr1.3:62694602-62694621 | MS.gene02996:CDS | 30.0% |
| !!! | TGTCGCTTTTTTGAGTATAA+TGG | + | chr1.3:62694601-62694620 | MS.gene02996:CDS | 30.0% |
| AAAACATGACTAAGCTTCTC+AGG | - | chr1.3:62694007-62694026 | None:intergenic | 35.0% | |
| AAAATCGACAAGGAAAACGT+TGG | + | chr1.3:62694904-62694923 | MS.gene02996:CDS | 35.0% | |
| AACAATGTGCAACTATCAAC+CGG | + | chr1.3:62694875-62694894 | MS.gene02996:CDS | 35.0% | |
| AACGCCGATCTTTATCTAAA+TGG | - | chr1.3:62693529-62693548 | None:intergenic | 35.0% | |
| ACACCAATAAAAGGAGCAAA+TGG | - | chr1.3:62693764-62693783 | None:intergenic | 35.0% | |
| ACTCATTATGCTAAGTCAGT+TGG | + | chr1.3:62693110-62693129 | MS.gene02996:CDS | 35.0% | |
| AGAAGATGTGTGTTCTAGTA+AGG | + | chr1.3:62694747-62694766 | MS.gene02996:CDS | 35.0% | |
| AGACCAAGAACACTTTCATA+TGG | + | chr1.3:62693834-62693853 | MS.gene02996:intron | 35.0% | |
| AGAGAAGACTATCAAGAGTT+TGG | + | chr1.3:62693689-62693708 | MS.gene02996:intron | 35.0% | |
| AGGTATTTACTGCTTCTCTT+TGG | - | chr1.3:62695160-62695179 | None:intergenic | 35.0% | |
| AGTTATGCTTGCACAAGATA+CGG | + | chr1.3:62693194-62693213 | MS.gene02996:CDS | 35.0% | |
| ATCCCACTCTTTATTCTTCT+TGG | - | chr1.3:62694991-62695010 | None:intergenic | 35.0% | |
| ATGCTAAGTCAGTTGGATTT+GGG | + | chr1.3:62693117-62693136 | MS.gene02996:CDS | 35.0% | |
| ATTGAAACTTTGCACCATGT+TGG | + | chr1.3:62693416-62693435 | MS.gene02996:CDS | 35.0% | |
| ATTTGCTTCTCAAAAGGTGA+TGG | - | chr1.3:62694397-62694416 | None:intergenic | 35.0% | |
| CAAAATCGATGTCGAGAATT+TGG | - | chr1.3:62693959-62693978 | None:intergenic | 35.0% | |
| CACTTTCAATCAAGGTTACT+TGG | + | chr1.3:62693791-62693810 | MS.gene02996:intron | 35.0% | |
| CGTGTTAAAAGAATCTGTGA+TGG | + | chr1.3:62693284-62693303 | MS.gene02996:CDS | 35.0% | |
| CTCATGCAAGAAAAAAATCC+AGG | + | chr1.3:62693596-62693615 | MS.gene02996:CDS | 35.0% | |
| CTCCAAGAAGAATAAAGAGT+GGG | + | chr1.3:62694986-62695005 | MS.gene02996:CDS | 35.0% | |
| GAAAATATGGCTTAGAGCAA+TGG | + | chr1.3:62693862-62693881 | MS.gene02996:intron | 35.0% | |
| GCAATTGATATGGATGATGA+GGG | + | chr1.3:62693629-62693648 | MS.gene02996:CDS | 35.0% | |
| GCTATTGAATTTCTCGAAGA+AGG | + | chr1.3:62694796-62694815 | MS.gene02996:CDS | 35.0% | |
| GGAAAATAATGTGCATATGC+TGG | - | chr1.3:62693359-62693378 | None:intergenic | 35.0% | |
| TATGCTAAGTCAGTTGGATT+TGG | + | chr1.3:62693116-62693135 | MS.gene02996:CDS | 35.0% | |
| TCAAACTCCATTCCAATGTT+AGG | - | chr1.3:62693062-62693081 | None:intergenic | 35.0% | |
| TCAAAGTTTCTTCAAGTGCA+TGG | - | chr1.3:62694855-62694874 | None:intergenic | 35.0% | |
| TCAAGAACCTAACATTGGAA+TGG | + | chr1.3:62693052-62693071 | MS.gene02996:CDS | 35.0% | |
| TCAAGATAGAGCAATGAAAG+AGG | + | chr1.3:62693916-62693935 | MS.gene02996:intron | 35.0% | |
| TCAGTTATGATTGCATTTGG+AGG | - | chr1.3:62693896-62693915 | None:intergenic | 35.0% | |
| TGAAGATAAGTGGCATGAAA+TGG | + | chr1.3:62694096-62694115 | MS.gene02996:intron | 35.0% | |
| TGCAATTGATATGGATGATG+AGG | + | chr1.3:62693628-62693647 | MS.gene02996:CDS | 35.0% | |
| TTAGAAGCAAGCATCATACA+AGG | + | chr1.3:62694716-62694735 | MS.gene02996:CDS | 35.0% | |
| TTCACCATTGAGAACATTTG+AGG | - | chr1.3:62695180-62695199 | None:intergenic | 35.0% | |
| TTTAGATAAAGATCGGCGTT+TGG | + | chr1.3:62693529-62693548 | MS.gene02996:CDS | 35.0% | |
| ! | ATTTTCACAGGAAAGTCATC+AGG | + | chr1.3:62695307-62695326 | MS.gene02996:intron | 35.0% |
| ! | CATTATTTTCCTTGCCATAG+AGG | + | chr1.3:62693368-62693387 | MS.gene02996:CDS | 35.0% |
| ! | TTTTCACAGGAAAGTCATCA+GGG | + | chr1.3:62695308-62695327 | MS.gene02996:intron | 35.0% |
| !! | ATGCCATTTGCTCCTTTTAT+TGG | + | chr1.3:62693758-62693777 | MS.gene02996:intron | 35.0% |
| !! | CAACCATATGAAAGTGTTCT+TGG | - | chr1.3:62693840-62693859 | None:intergenic | 35.0% |
| !! | GAGCTTTATTGATTCCTCTA+TGG | - | chr1.3:62693385-62693404 | None:intergenic | 35.0% |
| !! | TTATTGATTCCTCTATGGCA+AGG | - | chr1.3:62693380-62693399 | None:intergenic | 35.0% |
| !! | TTCATGTACCGTTGATTTAG+AGG | + | chr1.3:62693019-62693038 | MS.gene02996:CDS | 35.0% |
| !!! | GTTGAAGTTTTGGGATTATC+TGG | + | chr1.3:62694457-62694476 | MS.gene02996:CDS | 35.0% |
| ACAATGGCCAAAGAATATGG+AGG | + | chr1.3:62693464-62693483 | MS.gene02996:CDS | 40.0% | |
| AGATAAGTGGCATGAAATGG+TGG | + | chr1.3:62694099-62694118 | MS.gene02996:intron | 40.0% | |
| AGGAGATGCAAATGCAATGT+TGG | + | chr1.3:62693562-62693581 | MS.gene02996:CDS | 40.0% | |
| ATGCTTGCTTCTAACATCCT+TGG | - | chr1.3:62694710-62694729 | None:intergenic | 40.0% | |
| CTGGAAAAAGTTCGTGATTG+TGG | - | chr1.3:62693340-62693359 | None:intergenic | 40.0% | |
| GAATGAAGAGCAAGTTGTCA+AGG | + | chr1.3:62692980-62692999 | MS.gene02996:CDS | 40.0% | |
| GCTCCAAGAAGAATAAAGAG+TGG | + | chr1.3:62694985-62695004 | MS.gene02996:CDS | 40.0% | |
| TCCATATTCTTTGGCCATTG+TGG | - | chr1.3:62693465-62693484 | None:intergenic | 40.0% | |
| TGCTTTACAGGATAGAGAAG+AGG | + | chr1.3:62694318-62694337 | MS.gene02996:CDS | 40.0% | |
| TTTACAGGATAGAGAAGAGG+CGG | + | chr1.3:62694321-62694340 | MS.gene02996:CDS | 40.0% | |
| ! | AAATCCACGTCCTTGTTTGA+AGG | + | chr1.3:62693241-62693260 | MS.gene02996:CDS | 40.0% |
| ! | ACCGTTAGCCTCTAAATCAA+CGG | - | chr1.3:62693030-62693049 | None:intergenic | 40.0% |
| ! | ATGGAAGTTGTTGATGGGAA+TGG | + | chr1.3:62692939-62692958 | MS.gene02996:CDS | 40.0% |
| ! | TTGATGGCATTCCAAGCTAT+TGG | + | chr1.3:62694643-62694662 | MS.gene02996:CDS | 40.0% |
| !! | ACCGTTGATTTAGAGGCTAA+CGG | + | chr1.3:62693026-62693045 | MS.gene02996:CDS | 40.0% |
| !! | GTATTTTGGGTGGATGCAAA+AGG | + | chr1.3:62693665-62693684 | MS.gene02996:CDS | 40.0% |
| !!! | CCTTGTCGATTTTCAAAGAC+CGG | - | chr1.3:62694897-62694916 | None:intergenic | 40.0% |
| !!! | CTCGACATCGATTTTGTCTT+TGG | + | chr1.3:62693963-62693982 | MS.gene02996:intron | 40.0% |
| !!! | GGCAAGCTGATTTTAAGACA+TGG | + | chr1.3:62694347-62694366 | MS.gene02996:CDS | 40.0% |
| AACAGCTGCATTGCCAAGAA+TGG | + | chr1.3:62695202-62695221 | MS.gene02996:CDS | 45.0% | |
| AGAGTGTGATGTCTCGAAGA+AGG | + | chr1.3:62694564-62694583 | MS.gene02996:CDS | 45.0% | |
| ATAAAGAGTGGGATCGAGAG+AGG | + | chr1.3:62694997-62695016 | MS.gene02996:CDS | 45.0% | |
| ATATGGCTTAGAGCAATGGG+TGG | + | chr1.3:62693866-62693885 | MS.gene02996:intron | 45.0% | |
| CAACACAGACACCAATAGCT+TGG | - | chr1.3:62694657-62694676 | None:intergenic | 45.0% | |
| GCCACAATGGCCAAAGAATA+TGG | + | chr1.3:62693461-62693480 | MS.gene02996:CDS | 45.0% | |
| GGTGGTCAAGAACCTAACAT+TGG | + | chr1.3:62693047-62693066 | MS.gene02996:CDS | 45.0% | |
| TCACATCCCACCTTCAAACA+AGG | - | chr1.3:62693254-62693273 | None:intergenic | 45.0% | |
| TGCTTGTTCTCACTCCAACA+TGG | - | chr1.3:62693433-62693452 | None:intergenic | 45.0% | |
| TTGTTTGAAGGTGGGATGTG+AGG | + | chr1.3:62693253-62693272 | MS.gene02996:CDS | 45.0% | |
| ! | AGGACGTGGATTTTGTGAAC+TGG | - | chr1.3:62693234-62693253 | None:intergenic | 45.0% |
| ! | CCGGTCTTTGAAAATCGACA+AGG | + | chr1.3:62694894-62694913 | MS.gene02996:CDS | 45.0% |
| ! | GTTGATTTAGAGGCTAACGG+TGG | + | chr1.3:62693029-62693048 | MS.gene02996:CDS | 45.0% |
| AGGATAGAGAAGAGGCGGAA+AGG | + | chr1.3:62694326-62694345 | MS.gene02996:CDS | 50.0% | |
| GGCACAAGCAACCTGTTCTT+AGG | + | chr1.3:62694368-62694387 | MS.gene02996:CDS | 50.0% | |
| ! | CCACGTCCTTGTTTGAAGGT+GGG | + | chr1.3:62693245-62693264 | MS.gene02996:CDS | 50.0% |
| ! | TCCACGTCCTTGTTTGAAGG+TGG | + | chr1.3:62693244-62693263 | MS.gene02996:CDS | 50.0% |
| !! | CGGCGTTTGGCTTTAGAATC+AGG | + | chr1.3:62693542-62693561 | MS.gene02996:CDS | 50.0% |
| !! | GGTGATGGAGTCCTAAGAAC+AGG | - | chr1.3:62694382-62694401 | None:intergenic | 50.0% |
| CCCACCTTCAAACAAGGACG+TGG | - | chr1.3:62693248-62693267 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 62692939 | 62695334 | 62692939 | ID=MS.gene02996 |
| chr1.3 | mRNA | 62692939 | 62695334 | 62692939 | ID=MS.gene02996.t1;Parent=MS.gene02996 |
| chr1.3 | exon | 62692939 | 62693686 | 62692939 | ID=MS.gene02996.t1.exon1;Parent=MS.gene02996.t1 |
| chr1.3 | CDS | 62692939 | 62693686 | 62692939 | ID=cds.MS.gene02996.t1;Parent=MS.gene02996.t1 |
| chr1.3 | exon | 62694101 | 62695053 | 62694101 | ID=MS.gene02996.t1.exon2;Parent=MS.gene02996.t1 |
| chr1.3 | CDS | 62694101 | 62695053 | 62694101 | ID=cds.MS.gene02996.t1;Parent=MS.gene02996.t1 |
| chr1.3 | exon | 62695146 | 62695223 | 62695146 | ID=MS.gene02996.t1.exon3;Parent=MS.gene02996.t1 |
| chr1.3 | CDS | 62695146 | 62695223 | 62695146 | ID=cds.MS.gene02996.t1;Parent=MS.gene02996.t1 |
| chr1.3 | exon | 62695317 | 62695334 | 62695317 | ID=MS.gene02996.t1.exon4;Parent=MS.gene02996.t1 |
| chr1.3 | CDS | 62695317 | 62695334 | 62695317 | ID=cds.MS.gene02996.t1;Parent=MS.gene02996.t1 |
| Gene Sequence |
| Protein sequence |