AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030128

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030128.t1 MTR_4g123040 77.460 315 6 2 1 250 1 315 6.32e-153 428
MS.gene030128.t1 MTR_1g086530 47.893 261 98 7 17 248 26 277 1.56e-74 228
MS.gene030128.t1 MTR_2g033170 78.065 155 22 1 1 143 1 155 9.32e-74 228
MS.gene030128.t1 MTR_2g033170 56.566 99 37 4 152 250 237 329 4.38e-20 87.8
MS.gene030128.t1 MTR_1g086510 68.571 140 32 1 16 143 13 152 4.88e-68 211
MS.gene030128.t1 MTR_1g110460 50.971 206 70 4 19 212 21 207 2.08e-61 196
MS.gene030128.t1 MTR_7g035075 71.304 115 20 2 16 118 7 120 1.31e-52 169
MS.gene030128.t1 MTR_6g006030 69.725 109 21 1 23 119 13 121 7.87e-51 165
MS.gene030128.t1 MTR_1g045610 60.000 105 30 1 25 117 22 126 1.96e-39 137
MS.gene030128.t1 MTR_1g073170 57.143 105 33 1 25 117 21 125 1.45e-37 132
MS.gene030128.t1 MTR_8g027345 52.941 119 42 3 21 125 9 127 4.25e-35 127
MS.gene030128.t1 MTR_2g089620 54.206 107 37 2 20 114 8 114 1.65e-34 126
MS.gene030128.t1 MTR_5g029840 48.819 127 51 3 20 134 8 132 1.67e-34 126
MS.gene030128.t1 MTR_4g125520 55.963 109 36 2 24 120 12 120 2.85e-34 125
MS.gene030128.t1 MTR_7g117730 55.963 109 36 2 21 117 9 117 2.87e-34 124
MS.gene030128.t1 MTR_3g083540 57.547 106 33 2 21 114 38 143 8.71e-34 124
MS.gene030128.t1 MTR_1g076150 43.151 146 64 3 20 153 8 146 1.87e-33 122
MS.gene030128.t1 MTR_2g011660 53.398 103 36 2 24 114 13 115 2.65e-33 124
MS.gene030128.t1 MTR_1g017000 52.778 108 38 3 20 114 8 115 2.70e-33 121
MS.gene030128.t1 MTR_3g052450 47.748 111 46 1 20 118 36 146 4.45e-33 125
MS.gene030128.t1 MTR_4g091490 50.450 111 43 2 24 122 13 123 9.30e-33 122
MS.gene030128.t1 MTR_6g012690 48.696 115 47 2 20 122 8 122 1.39e-32 122
MS.gene030128.t1 MTR_3g074520 46.212 132 55 3 20 135 8 139 1.79e-32 121
MS.gene030128.t1 MTR_4g063100 49.074 108 43 1 25 120 8 115 2.10e-32 119
MS.gene030128.t1 MTR_2g096380 48.182 110 45 1 23 120 5 114 2.20e-32 118
MS.gene030128.t1 MTR_7g011170 46.957 115 49 2 20 122 8 122 2.27e-32 120
MS.gene030128.t1 MTR_4g478180 50.435 115 45 2 20 122 9 123 2.63e-32 121
MS.gene030128.t1 MTR_1g100653 50.450 111 43 2 20 118 8 118 5.36e-32 119
MS.gene030128.t1 MTR_3g052430 48.148 108 44 1 23 118 40 147 6.17e-32 122
MS.gene030128.t1 MTR_7g115650 46.847 111 47 2 20 118 8 118 7.23e-32 116
MS.gene030128.t1 MTR_5g007370 49.565 115 46 2 20 122 8 122 7.41e-32 119
MS.gene030128.t1 MTR_1g043080 32.653 245 124 7 24 231 12 252 7.42e-32 117
MS.gene030128.t1 MTR_7g096930 37.931 174 94 3 20 179 8 181 9.34e-32 118
MS.gene030128.t1 MTR_7g076740 47.934 121 50 3 20 127 8 128 1.34e-31 118
MS.gene030128.t1 MTR_5g079670 43.802 121 56 2 20 128 7 127 3.29e-31 115
MS.gene030128.t1 MTR_8g098860 48.649 111 45 2 20 118 8 118 3.40e-31 117
MS.gene030128.t1 MTR_4g121460 51.402 107 40 2 20 114 8 114 4.86e-31 117
MS.gene030128.t1 MTR_4g073420 54.455 101 34 2 26 114 14 114 4.99e-31 116
MS.gene030128.t1 MTR_4g100720 51.376 109 41 2 24 120 13 121 6.22e-31 113
MS.gene030128.t1 MTR_4g082290 45.082 122 55 2 20 129 8 129 8.25e-31 118
MS.gene030128.t1 MTR_3g097450 54.455 101 34 2 26 114 14 114 8.84e-31 115
MS.gene030128.t1 MTR_1g085040 48.276 116 48 2 24 127 12 127 9.08e-31 117
MS.gene030128.t1 MTR_4g082230 45.082 122 55 2 20 129 8 129 1.45e-30 117
MS.gene030128.t1 MTR_1g062940 50.962 104 39 1 23 114 5 108 1.47e-30 113
MS.gene030128.t1 MTR_1g043050 39.521 167 79 4 24 171 12 175 1.73e-30 114
MS.gene030128.t1 MTR_4g485530 35.838 173 87 3 21 169 9 181 1.84e-30 112
MS.gene030128.t1 MTR_2g097910 49.074 108 43 2 24 119 20 127 2.40e-30 115
MS.gene030128.t1 MTR_3g011610 50.485 103 39 2 24 114 37 139 2.44e-30 118
MS.gene030128.t1 MTR_8g095390 53.465 101 35 2 26 114 14 114 3.02e-30 115
MS.gene030128.t1 MTR_5g010020 53.465 101 35 2 20 108 8 108 4.64e-30 115
MS.gene030128.t1 MTR_2g099740 49.515 103 40 2 24 114 12 114 5.12e-30 115
MS.gene030128.t1 MTR_8g031360 50.459 109 41 3 19 114 8 116 5.59e-30 114
MS.gene030128.t1 MTR_8g042410 51.456 103 38 2 24 114 37 139 7.81e-30 117
MS.gene030128.t1 MTR_8g020490 49.541 109 42 3 23 118 7 115 8.35e-30 112
MS.gene030128.t1 MTR_1g021230 50.000 106 41 2 24 117 57 162 8.75e-30 115
MS.gene030128.t1 MTR_5g078140 46.087 115 50 2 20 122 8 122 1.49e-29 113
MS.gene030128.t1 MTR_7g110830 48.649 111 45 2 24 122 12 122 1.70e-29 114
MS.gene030128.t1 MTR_3g065440 46.087 115 50 2 20 122 8 122 1.95e-29 112
MS.gene030128.t1 MTR_8g017440 47.664 107 44 2 20 114 8 114 2.40e-29 113
MS.gene030128.t1 MTR_4g102380 47.664 107 44 2 20 114 8 114 2.63e-29 111
MS.gene030128.t1 MTR_4g065017 48.148 108 44 2 24 119 17 124 2.90e-29 112
MS.gene030128.t1 MTR_8g017500 48.544 103 41 2 24 114 12 114 3.01e-29 113
MS.gene030128.t1 MTR_2g034790 49.533 107 42 2 20 114 8 114 4.82e-29 112
MS.gene030128.t1 MTR_2g089450 50.467 107 41 2 20 114 8 114 6.63e-29 110
MS.gene030128.t1 MTR_2g064160 47.573 103 42 2 24 114 11 113 6.71e-29 111
MS.gene030128.t1 MTR_8g017540 48.544 103 41 2 24 114 58 160 1.02e-28 112
MS.gene030128.t1 MTR_7g010210 45.045 111 49 2 20 118 8 118 1.11e-28 111
MS.gene030128.t1 MTR_0251s0050 48.598 107 43 2 24 118 13 119 1.14e-28 109
MS.gene030128.t1 MTR_0008s0280 46.364 110 47 2 20 117 8 117 1.15e-28 108
MS.gene030128.t1 MTR_7g010210 45.045 111 49 2 20 118 8 118 1.26e-28 109
MS.gene030128.t1 MTR_2g067420 49.038 104 41 2 20 111 10 113 1.36e-28 110
MS.gene030128.t1 MTR_4g057635 49.074 108 42 3 20 114 8 115 1.40e-28 110
MS.gene030128.t1 MTR_2g089420 47.107 121 51 3 24 131 11 131 1.52e-28 112
MS.gene030128.t1 MTR_1g085640 47.748 111 46 2 24 122 12 122 1.73e-28 111
MS.gene030128.t1 MTR_6g009430 44.348 115 52 2 20 122 8 122 2.09e-28 110
MS.gene030128.t1 MTR_1g100667 44.800 125 55 4 18 129 7 130 2.43e-28 108
MS.gene030128.t1 MTR_7g111290 49.138 116 47 2 24 127 12 127 2.85e-28 110
MS.gene030128.t1 MTR_0008s0390 49.524 105 41 2 24 116 13 117 2.94e-28 108
MS.gene030128.t1 MTR_0063s0090 37.576 165 77 5 20 170 8 160 3.29e-28 107
MS.gene030128.t1 MTR_7g087130 44.860 107 47 1 20 114 8 114 3.97e-28 109
MS.gene030128.t1 MTR_3g028740 46.341 123 48 4 7 117 11 127 5.17e-28 109
MS.gene030128.t1 MTR_3g039990 42.857 112 52 2 20 119 9 120 6.72e-28 108
MS.gene030128.t1 MTR_1g112760 50.000 108 41 3 24 118 13 120 6.98e-28 106
MS.gene030128.t1 MTR_3g077110 45.600 125 55 3 24 135 12 136 8.75e-28 108
MS.gene030128.t1 MTR_0008s0470 48.571 105 42 2 24 116 13 117 9.55e-28 107
MS.gene030128.t1 MTR_3g103570 49.074 108 42 3 20 114 8 115 1.02e-27 108
MS.gene030128.t1 MTR_0140s0030 43.925 107 48 2 20 114 9 115 2.13e-27 107
MS.gene030128.t1 MTR_0489s0020 43.925 107 48 2 20 114 9 115 2.13e-27 107
MS.gene030128.t1 MTR_5g014990 47.414 116 46 4 20 120 8 123 3.14e-27 107
MS.gene030128.t1 MTR_1g017140 47.414 116 46 4 20 120 8 123 3.27e-27 107
MS.gene030128.t1 MTR_6g012180 46.602 103 43 2 20 110 8 110 6.68e-27 106
MS.gene030128.t1 MTR_4g105130 49.074 108 42 3 24 118 12 119 6.81e-27 107
MS.gene030128.t1 MTR_8g017340 47.115 104 42 3 24 114 12 115 1.17e-26 107
MS.gene030128.t1 MTR_8g017350 47.115 104 42 3 24 114 12 115 1.49e-26 108
MS.gene030128.t1 MTR_3g461490 43.089 123 57 3 23 132 11 133 2.08e-26 105
MS.gene030128.t1 MTR_5g042030 40.833 120 59 1 22 129 5 124 2.18e-26 104
MS.gene030128.t1 MTR_2g095520 48.077 104 41 3 20 110 8 111 2.54e-26 104
MS.gene030128.t1 MTR_7g102110 45.370 108 46 3 20 114 8 115 3.02e-26 103
MS.gene030128.t1 MTR_4g128670 50.000 104 39 3 20 110 8 111 3.54e-26 104
MS.gene030128.t1 MTR_1g083630 44.737 114 51 2 16 117 4 117 6.12e-26 106
MS.gene030128.t1 MTR_8g017390 47.115 104 42 3 24 114 12 115 1.32e-25 104
MS.gene030128.t1 MTR_6g055910 47.059 102 42 2 25 114 15 116 1.63e-25 101
MS.gene030128.t1 MTR_4g097570 49.020 102 39 3 20 108 8 109 2.88e-25 101
MS.gene030128.t1 MTR_2g088170 45.690 116 47 3 15 114 16 131 2.98e-25 103
MS.gene030128.t1 MTR_6g090405 46.296 108 45 3 20 114 8 115 9.71e-25 99.0
MS.gene030128.t1 MTR_0197s0010 29.911 224 136 6 29 240 6 220 1.48e-24 98.2
MS.gene030128.t1 MTR_5g088640 40.741 108 51 1 23 117 11 118 2.62e-24 98.6
MS.gene030128.t1 MTR_5g088080 40.741 108 51 1 23 117 11 118 2.64e-24 98.2
MS.gene030128.t1 MTR_5g088150 40.741 108 51 1 23 117 11 118 2.64e-24 98.2
MS.gene030128.t1 MTR_5g488210 40.741 108 51 1 23 117 11 118 2.64e-24 98.2
MS.gene030128.t1 MTR_5g488170 40.741 108 51 1 23 117 11 118 4.17e-24 97.1
MS.gene030128.t1 MTR_5g007300 53.333 75 35 0 24 98 64 138 7.02e-24 94.0
MS.gene030128.t1 MTR_4g097570 48.544 103 39 4 20 108 8 110 1.05e-23 97.1
MS.gene030128.t1 MTR_7g109320 47.664 107 44 2 20 114 8 114 1.23e-23 98.2
MS.gene030128.t1 MTR_5g079120 37.241 145 76 4 19 148 56 200 1.80e-23 96.7
MS.gene030128.t1 MTR_5g062790 38.182 110 55 1 22 118 7 116 3.93e-23 95.9
MS.gene030128.t1 MTR_8g060940 46.226 106 45 2 19 112 2 107 5.93e-23 94.0
MS.gene030128.t1 MTR_5g078910 42.593 108 50 2 19 114 2 109 3.51e-22 93.2
MS.gene030128.t1 MTR_4g063100 53.247 77 24 1 56 120 10 86 7.30e-22 90.9
MS.gene030128.t1 MTR_0247s0040 45.098 102 44 2 24 113 7 108 7.64e-22 89.7
MS.gene030128.t1 MTR_5g079290 42.373 118 54 3 9 114 4 119 8.35e-22 91.7
MS.gene030128.t1 MTR_0193s0090 43.689 103 46 2 24 114 7 109 1.35e-21 89.7
MS.gene030128.t1 MTR_7g017260 40.157 127 54 4 2 114 11 129 1.55e-21 90.9
MS.gene030128.t1 MTR_8g006470 32.704 159 72 3 15 160 1 137 1.80e-21 90.9
MS.gene030128.t1 MTR_5g078800 43.519 108 49 2 19 114 2 109 2.17e-21 90.5
MS.gene030128.t1 MTR_0001s0360 32.143 168 102 2 24 179 7 174 2.91e-21 89.7
MS.gene030128.t1 MTR_5g079220 43.689 103 46 2 24 114 21 123 5.72e-21 89.4
MS.gene030128.t1 MTR_5g078950 44.118 102 45 2 24 113 7 108 9.79e-21 88.6
MS.gene030128.t1 MTR_2g096380 53.247 77 24 1 56 120 19 95 2.07e-20 86.7
MS.gene030128.t1 MTR_4g029540 33.621 116 64 2 15 117 1 116 3.47e-20 87.8
MS.gene030128.t1 MTR_5g078860 42.593 108 50 2 19 114 2 109 3.77e-20 87.8
MS.gene030128.t1 MTR_5g078930 44.554 101 44 2 25 113 10 110 3.93e-20 85.9
MS.gene030128.t1 MTR_5g088610 35.780 109 57 1 22 117 7 115 1.94e-19 86.3
MS.gene030128.t1 MTR_7g061330 38.462 104 51 3 23 114 110 212 3.34e-17 80.9
MS.gene030128.t1 MTR_7g461410 38.462 104 51 3 23 114 110 212 3.34e-17 80.9
MS.gene030128.t1 MTR_5g016510 36.283 113 59 2 22 122 1 112 3.39e-17 79.7
MS.gene030128.t1 MTR_7g061330 38.462 104 51 3 23 114 74 176 5.91e-17 80.1
MS.gene030128.t1 MTR_7g111290 50.000 84 30 2 56 127 2 85 9.91e-17 78.6
MS.gene030128.t1 MTR_6g027340 36.937 111 57 3 29 127 19 128 1.29e-16 76.3
MS.gene030128.t1 MTR_4g128190 33.103 145 57 4 14 131 1 132 1.43e-16 76.6
MS.gene030128.t1 MTR_3g045430 34.921 126 69 3 16 128 5 130 1.51e-16 77.8
MS.gene030128.t1 MTR_3g110028 37.500 104 52 3 23 114 82 184 3.53e-16 78.2
MS.gene030128.t1 MTR_6g015455 40.404 99 46 2 22 108 1 98 7.90e-16 77.0
MS.gene030128.t1 MTR_1g085880 37.391 115 58 2 14 114 1 115 8.04e-16 73.9
MS.gene030128.t1 MTR_6g055910 50.000 70 23 2 57 114 18 87 1.49e-15 74.3
MS.gene030128.t1 MTR_6g027360 35.345 116 62 3 24 127 76 190 2.44e-15 74.3
MS.gene030128.t1 MTR_1g085770 37.391 115 58 2 14 114 1 115 3.44e-15 73.9
MS.gene030128.t1 MTR_4g019370 37.624 101 50 3 26 114 38 137 4.11e-15 73.9
MS.gene030128.t1 MTR_1g026870 35.577 104 54 3 23 114 82 184 9.14e-15 73.9
MS.gene030128.t1 MTR_5g070020 31.469 143 84 4 2 131 97 238 1.37e-14 72.8
MS.gene030128.t1 MTR_4g094982 36.190 105 54 2 22 114 1 104 1.78e-14 71.6
MS.gene030128.t1 MTR_5g049190 35.052 97 50 3 24 108 17 112 4.49e-14 70.1
MS.gene030128.t1 MTR_4g088015 32.000 125 72 3 23 135 218 341 6.19e-14 71.2
MS.gene030128.t1 MTR_3g463400 36.364 99 50 3 22 108 129 226 6.40e-14 71.2
MS.gene030128.t1 MTR_6g074860 36.792 106 52 4 26 118 4 107 9.64e-14 68.9
MS.gene030128.t1 MTR_3g077650 35.644 101 50 4 21 108 176 274 1.23e-13 70.1
MS.gene030128.t1 MTR_7g450950 35.514 107 56 3 26 120 157 262 1.31e-13 69.7
MS.gene030128.t1 MTR_3g101290 33.636 110 60 3 19 116 30 138 1.56e-13 68.2
MS.gene030128.t1 MTR_7g037260 26.389 216 132 7 18 216 137 342 1.60e-13 69.7
MS.gene030128.t1 MTR_4g105660 34.513 113 55 4 24 121 178 286 2.28e-13 69.3
MS.gene030128.t1 MTR_1g057980 33.333 126 69 3 2 115 58 180 2.96e-13 68.2
MS.gene030128.t1 MTR_0023s0210 40.845 71 42 0 24 94 7 77 8.84e-13 62.8
MS.gene030128.t1 MTR_5g082910 38.776 98 47 3 23 108 16 112 8.99e-13 67.0
MS.gene030128.t1 MTR_5g041570 38.144 97 47 3 26 110 134 229 1.07e-12 67.4
MS.gene030128.t1 MTR_6g027370 33.333 114 63 3 26 127 99 211 3.00e-12 65.9
MS.gene030128.t1 MTR_3g089045 31.783 129 75 3 16 132 6 133 3.08e-12 65.5
MS.gene030128.t1 MTR_7g035350 36.364 99 50 3 29 115 228 325 3.47e-12 65.9
MS.gene030128.t1 MTR_4g082040 34.188 117 60 4 10 110 85 200 5.99e-12 65.1
MS.gene030128.t1 MTR_7g451170 38.542 96 44 4 26 108 191 284 1.01e-11 64.3
MS.gene030128.t1 MTR_5g010650 35.714 98 50 3 23 108 107 203 2.45e-11 63.5
MS.gene030128.t1 MTR_7g061550 30.909 110 62 3 29 124 10 119 2.50e-11 63.2
MS.gene030128.t1 MTR_7g037130 29.927 137 82 4 11 135 131 265 6.15e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030128.t1 AT5G49620 68.927 177 41 2 1 163 1 177 2.27e-70 218
MS.gene030128.t1 AT3G06490 74.839 155 22 2 1 143 1 150 1.69e-68 214
MS.gene030128.t1 AT5G49620 63.874 191 41 2 1 163 1 191 3.62e-68 213
MS.gene030128.t1 AT1G48000 67.857 140 33 1 22 149 30 169 1.17e-67 209
MS.gene030128.t1 AT2G47190 45.560 259 111 8 17 249 13 267 6.01e-64 201
MS.gene030128.t1 AT1G68320 62.937 143 38 2 23 150 18 160 4.17e-58 186
MS.gene030128.t1 AT1G25340 46.190 210 87 3 19 209 13 215 6.01e-56 181
MS.gene030128.t1 AT3G27810 69.091 110 22 1 21 118 17 126 2.22e-51 167
MS.gene030128.t1 AT1G25340 44.286 210 86 4 19 209 13 210 1.96e-50 166
MS.gene030128.t1 AT1G25340 44.286 210 86 4 19 209 13 210 3.46e-50 167
MS.gene030128.t1 AT5G40350 68.868 106 21 1 21 114 14 119 6.51e-49 160
MS.gene030128.t1 AT3G01530 59.690 129 37 3 1 117 5 130 7.75e-48 157
MS.gene030128.t1 AT4G13480 59.048 105 31 1 25 117 7 111 5.33e-39 136
MS.gene030128.t1 AT3G24310 57.798 109 34 1 21 117 15 123 7.25e-39 136
MS.gene030128.t1 AT3G30210 38.947 190 95 4 3 174 6 192 2.00e-38 135
MS.gene030128.t1 AT3G02940 52.174 115 43 2 20 122 8 122 3.66e-35 127
MS.gene030128.t1 AT3G02940 52.174 115 43 2 20 122 8 122 5.28e-35 127
MS.gene030128.t1 AT3G02940 52.174 115 43 2 20 122 8 122 5.28e-35 127
MS.gene030128.t1 AT3G13540 56.604 106 34 2 21 114 20 125 1.73e-34 124
MS.gene030128.t1 AT5G54230 51.351 111 42 2 24 122 12 122 2.97e-34 125
MS.gene030128.t1 AT5G16770 47.059 136 58 4 20 141 8 143 4.60e-34 125
MS.gene030128.t1 AT5G16770 47.059 136 58 4 20 141 8 143 4.60e-34 125
MS.gene030128.t1 AT5G16770 47.059 136 58 4 20 141 8 143 6.33e-34 125
MS.gene030128.t1 AT5G16770 47.059 136 58 4 20 141 8 143 6.33e-34 125
MS.gene030128.t1 AT3G46130 50.000 112 44 1 25 124 10 121 8.02e-34 123
MS.gene030128.t1 AT5G59780 50.000 110 43 1 23 120 7 116 9.87e-34 122
MS.gene030128.t1 AT4G05100 49.138 116 47 2 19 122 8 123 2.32e-33 123
MS.gene030128.t1 AT1G34670 45.522 134 60 3 20 141 8 140 3.84e-33 124
MS.gene030128.t1 AT5G40330 50.893 112 43 2 15 114 3 114 4.68e-33 120
MS.gene030128.t1 AT5G14750 50.450 111 43 2 16 114 8 118 5.05e-33 119
MS.gene030128.t1 AT4G28110 50.467 107 41 2 20 114 8 114 5.44e-33 121
MS.gene030128.t1 AT4G34990 57.426 101 31 2 26 114 14 114 6.39e-33 121
MS.gene030128.t1 AT5G15310 46.341 123 54 2 20 130 8 130 6.57e-33 120
MS.gene030128.t1 AT3G01140 46.341 123 54 2 20 130 8 130 8.41e-33 122
MS.gene030128.t1 AT4G21440 49.550 111 44 2 24 122 12 122 9.39e-33 122
MS.gene030128.t1 AT5G15310 46.341 123 54 2 20 130 8 130 9.73e-33 122
MS.gene030128.t1 AT5G15310 46.341 123 54 2 20 130 8 130 1.10e-32 121
MS.gene030128.t1 AT1G06180 40.678 177 81 5 20 184 8 172 1.23e-32 119
MS.gene030128.t1 AT5G35550 56.731 104 33 2 23 114 13 116 1.45e-32 119
MS.gene030128.t1 AT5G65230 47.581 124 53 2 16 127 4 127 1.53e-32 120
MS.gene030128.t1 AT5G60890 45.865 133 59 3 21 140 9 141 1.54e-32 120
MS.gene030128.t1 AT3G01140 44.961 129 59 2 14 130 45 173 1.73e-32 122
MS.gene030128.t1 AT1G22640 47.934 121 51 2 20 128 8 128 4.50e-32 118
MS.gene030128.t1 AT3G23250 51.402 107 40 2 20 114 8 114 7.46e-32 118
MS.gene030128.t1 AT3G62610 52.336 107 39 2 20 114 8 114 7.96e-32 119
MS.gene030128.t1 AT5G10280 47.899 119 50 2 16 122 4 122 8.00e-32 119
MS.gene030128.t1 AT5G07690 50.962 104 39 1 24 115 12 115 8.12e-32 119
MS.gene030128.t1 AT2G31180 51.327 113 42 3 20 119 8 120 8.45e-32 117
MS.gene030128.t1 AT1G18570 52.830 106 38 2 21 114 10 115 1.16e-31 119
MS.gene030128.t1 AT4G12350 35.632 174 98 3 20 181 8 179 1.37e-31 117
MS.gene030128.t1 AT2G47460 52.336 107 39 2 20 114 8 114 2.00e-31 119
MS.gene030128.t1 AT5G14340 50.435 115 45 2 20 122 20 134 2.27e-31 117
MS.gene030128.t1 AT4G38620 54.455 101 34 2 26 114 14 114 2.56e-31 117
MS.gene030128.t1 AT3G27810 71.622 74 9 1 57 118 4 77 3.47e-31 114
MS.gene030128.t1 AT1G16490 50.467 107 41 2 20 114 10 116 4.31e-31 116
MS.gene030128.t1 AT4G26930 50.467 107 41 2 24 118 19 125 4.41e-31 118
MS.gene030128.t1 AT1G57560 53.398 103 36 2 24 114 12 114 5.00e-31 116
MS.gene030128.t1 AT1G57560 53.398 103 36 2 24 114 12 114 5.42e-31 117
MS.gene030128.t1 AT2G16720 53.465 101 35 2 26 114 14 114 6.22e-31 115
MS.gene030128.t1 AT1G09540 48.276 116 48 2 24 127 12 127 8.01e-31 117
MS.gene030128.t1 AT4G09460 53.465 101 35 2 26 114 14 114 8.79e-31 114
MS.gene030128.t1 AT4G22680 45.000 120 54 2 20 127 8 127 9.36e-31 115
MS.gene030128.t1 AT3G27920 47.500 120 48 3 18 125 8 124 1.16e-30 114
MS.gene030128.t1 AT3G61250 50.467 107 41 2 20 114 8 114 1.25e-30 115
MS.gene030128.t1 AT1G35515 49.533 107 42 2 20 114 8 114 1.51e-30 113
MS.gene030128.t1 AT5G07700 49.515 103 40 1 24 114 12 114 1.88e-30 116
MS.gene030128.t1 AT5G07700 49.515 103 40 1 24 114 12 114 1.88e-30 116
MS.gene030128.t1 AT3G53200 51.887 106 39 1 21 114 6 111 3.46e-30 113
MS.gene030128.t1 AT5G61420 49.515 103 40 1 24 114 12 114 3.82e-30 115
MS.gene030128.t1 AT5G52600 48.624 109 44 2 18 114 6 114 4.00e-30 112
MS.gene030128.t1 AT3G47600 45.299 117 50 3 20 122 8 124 4.48e-30 115
MS.gene030128.t1 AT1G63910 48.649 111 45 2 20 118 8 118 4.55e-30 115
MS.gene030128.t1 AT5G49330 51.402 107 40 2 20 114 8 114 4.57e-30 115
MS.gene030128.t1 AT3G13890 46.729 107 45 2 20 114 8 114 4.68e-30 115
MS.gene030128.t1 AT5G26660 51.456 103 38 2 24 114 12 114 7.06e-30 114
MS.gene030128.t1 AT2G26960 44.715 123 50 3 7 117 9 125 1.07e-29 115
MS.gene030128.t1 AT4G37780 48.718 117 45 4 20 121 8 124 1.41e-29 113
MS.gene030128.t1 AT3G11440 48.544 103 41 2 24 114 41 143 1.79e-29 115
MS.gene030128.t1 AT5G55020 48.598 107 43 2 24 118 26 132 1.99e-29 115
MS.gene030128.t1 AT1G79180 46.847 111 47 2 20 118 10 120 2.15e-29 112
MS.gene030128.t1 AT1G56160 49.533 107 42 2 20 114 10 116 2.41e-29 112
MS.gene030128.t1 AT1G74080 50.485 103 39 1 24 114 12 114 2.76e-29 112
MS.gene030128.t1 AT2G32460 47.573 103 42 1 24 114 18 120 3.46e-29 115
MS.gene030128.t1 AT2G32460 47.573 103 42 1 24 114 6 108 3.47e-29 114
MS.gene030128.t1 AT3G11440 48.544 103 41 2 24 114 41 143 4.75e-29 115
MS.gene030128.t1 AT3G11440 48.544 103 41 2 24 114 41 143 4.75e-29 115
MS.gene030128.t1 AT3G11440 48.544 103 41 2 24 114 41 143 4.75e-29 115
MS.gene030128.t1 AT5G06100 48.598 107 43 2 20 114 28 134 6.18e-29 114
MS.gene030128.t1 AT5G16600 45.217 115 51 2 20 122 8 122 9.39e-29 111
MS.gene030128.t1 AT5G06100 48.598 107 43 2 20 114 28 134 1.32e-28 113
MS.gene030128.t1 AT5G06100 48.598 107 43 2 20 114 28 134 1.32e-28 113
MS.gene030128.t1 AT5G06100 48.598 107 43 2 20 114 28 134 1.32e-28 113
MS.gene030128.t1 AT5G06100 48.598 107 43 2 20 114 28 134 1.32e-28 113
MS.gene030128.t1 AT5G40350 71.429 70 8 1 57 114 5 74 1.34e-28 107
MS.gene030128.t1 AT1G66230 44.348 115 52 2 20 122 8 122 1.48e-28 109
MS.gene030128.t1 AT5G12870 42.373 118 56 2 14 119 8 125 2.26e-28 109
MS.gene030128.t1 AT5G62470 43.750 112 51 2 20 119 8 119 2.54e-28 110
MS.gene030128.t1 AT3G08500 44.355 124 57 2 6 117 12 135 2.60e-28 110
MS.gene030128.t1 AT3G12720 46.602 103 43 2 24 114 22 124 2.82e-28 109
MS.gene030128.t1 AT1G08810 42.017 119 57 1 20 126 8 126 5.79e-28 108
MS.gene030128.t1 AT1G74650 44.860 107 47 2 20 114 8 114 7.92e-28 108
MS.gene030128.t1 AT4G01680 49.515 103 40 2 24 114 12 114 1.92e-27 105
MS.gene030128.t1 AT5G57620 47.222 108 44 3 20 114 8 115 3.32e-27 107
MS.gene030128.t1 AT4G01680 49.515 103 40 2 24 114 12 114 3.34e-27 107
MS.gene030128.t1 AT2G36890 49.074 108 42 3 20 114 8 115 3.44e-27 106
MS.gene030128.t1 AT3G13890 43.103 116 45 3 20 114 8 123 3.87e-27 107
MS.gene030128.t1 AT4G17785 47.748 111 46 2 24 122 13 123 4.31e-27 107
MS.gene030128.t1 AT3G28910 45.794 107 46 2 20 114 8 114 4.35e-27 107
MS.gene030128.t1 AT4G17785 47.748 111 46 2 24 122 13 123 4.42e-27 107
MS.gene030128.t1 AT5G62320 43.307 127 53 3 20 127 9 135 5.17e-27 105
MS.gene030128.t1 AT2G36890 49.074 108 42 3 20 114 49 156 5.73e-27 106
MS.gene030128.t1 AT3G49690 47.222 108 44 3 20 114 8 115 9.95e-27 105
MS.gene030128.t1 AT1G74430 49.074 108 42 3 24 118 12 119 1.57e-26 104
MS.gene030128.t1 AT3G28470 44.660 103 45 2 20 110 8 110 1.84e-26 105
MS.gene030128.t1 AT5G56110 43.089 123 57 3 23 132 11 133 2.01e-26 105
MS.gene030128.t1 AT5G62470 43.750 112 50 3 20 119 8 118 2.10e-26 105
MS.gene030128.t1 AT5G23000 46.296 108 45 3 20 114 8 115 5.51e-26 103
MS.gene030128.t1 AT5G65790 46.552 116 47 4 20 120 8 123 9.29e-26 103
MS.gene030128.t1 AT3G12820 46.729 107 45 2 20 114 10 116 3.05e-25 100
MS.gene030128.t1 AT3G48920 42.017 119 54 3 8 114 5 120 3.31e-25 100
MS.gene030128.t1 AT4G25560 46.078 102 43 2 25 114 11 112 6.83e-25 100
MS.gene030128.t1 AT1G18710 46.602 103 43 2 24 114 12 114 2.20e-24 98.6
MS.gene030128.t1 AT5G52260 45.045 111 49 2 16 114 4 114 5.47e-24 97.4
MS.gene030128.t1 AT4G01680 44.348 115 40 3 24 114 12 126 7.84e-24 98.6
MS.gene030128.t1 AT1G66370 42.609 115 54 2 19 121 3 117 1.62e-23 95.9
MS.gene030128.t1 AT1G79180 36.111 144 47 3 20 118 10 153 5.40e-23 95.9
MS.gene030128.t1 AT3G46130 51.163 86 30 1 51 124 4 89 2.13e-22 92.4
MS.gene030128.t1 AT3G60460 35.652 115 61 2 18 119 5 119 5.65e-22 92.8
MS.gene030128.t1 AT3G46130 53.750 80 25 1 57 124 20 99 9.32e-22 90.9
MS.gene030128.t1 AT5G59780 55.263 76 22 1 57 120 20 95 1.11e-21 90.1
MS.gene030128.t1 AT1G66380 43.119 109 50 2 18 114 2 110 1.03e-20 85.5
MS.gene030128.t1 AT1G56650 44.660 103 45 2 24 114 8 110 6.70e-20 85.9
MS.gene030128.t1 AT1G66390 44.660 103 45 2 24 114 8 110 4.13e-19 84.0
MS.gene030128.t1 AT3G53200 54.286 70 20 1 57 114 9 78 1.27e-18 81.6
MS.gene030128.t1 AT5G35550 53.947 76 23 2 51 114 44 119 3.53e-18 81.6
MS.gene030128.t1 AT5G26660 54.286 70 20 2 57 114 14 83 6.20e-18 82.0
MS.gene030128.t1 AT5G11050 36.441 118 62 3 3 108 82 198 6.93e-18 82.4
MS.gene030128.t1 AT2G26950 33.613 119 64 3 9 115 4 119 1.49e-17 81.3
MS.gene030128.t1 AT1G66380 47.826 69 36 0 18 86 2 70 2.45e-17 75.9
MS.gene030128.t1 AT2G23290 37.168 113 58 2 14 114 1 112 9.85e-17 78.2
MS.gene030128.t1 AT3G47600 48.750 80 27 3 57 122 39 118 4.39e-16 76.6
MS.gene030128.t1 AT3G09370 36.538 104 53 3 23 114 132 234 6.36e-16 77.0
MS.gene030128.t1 AT5G14750 53.731 67 19 2 60 114 18 84 6.45e-16 73.6
MS.gene030128.t1 AT3G09370 36.538 104 53 3 23 114 127 229 7.22e-16 77.0
MS.gene030128.t1 AT3G09370 36.538 104 53 3 23 114 140 242 7.39e-16 77.0
MS.gene030128.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.14e-16 77.0
MS.gene030128.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.27e-16 77.0
MS.gene030128.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.27e-16 77.0
MS.gene030128.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.27e-16 77.0
MS.gene030128.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.37e-16 77.0
MS.gene030128.t1 AT4G37260 35.043 117 58 3 22 126 9 119 2.35e-15 74.7
MS.gene030128.t1 AT3G12820 53.731 67 19 2 60 114 2 68 3.36e-15 72.0
MS.gene030128.t1 AT5G02320 35.577 104 54 3 23 114 124 226 5.05e-15 74.7
MS.gene030128.t1 AT5G02320 35.577 104 54 3 23 114 124 226 5.05e-15 74.7
MS.gene030128.t1 AT5G58850 37.755 98 48 3 23 108 102 198 9.21e-15 73.6
MS.gene030128.t1 AT4G32730 34.615 104 55 3 23 114 84 186 9.24e-15 73.9
MS.gene030128.t1 AT4G32730 34.615 104 55 3 23 114 84 186 9.24e-15 73.9
MS.gene030128.t1 AT4G32730 34.615 104 55 3 23 114 84 186 9.24e-15 73.9
MS.gene030128.t1 AT4G32730 34.615 104 55 3 23 114 84 186 9.24e-15 73.9
MS.gene030128.t1 AT5G02320 35.577 104 54 3 23 114 64 166 9.89e-15 73.6
MS.gene030128.t1 AT4G32730 34.615 104 55 3 23 114 84 186 1.00e-14 73.9
MS.gene030128.t1 AT3G29020 37.143 105 53 3 26 118 65 168 1.33e-14 71.2
MS.gene030128.t1 AT3G29020 37.143 105 53 3 26 118 67 170 1.49e-14 72.0
MS.gene030128.t1 AT4G18770 33.636 110 60 3 24 121 215 323 1.71e-14 72.8
MS.gene030128.t1 AT3G27785 37.895 95 46 3 26 108 189 282 3.20e-14 72.0
MS.gene030128.t1 AT5G17800 36.937 111 51 3 26 118 93 202 1.28e-13 69.7
MS.gene030128.t1 AT3G55730 35.644 101 52 3 26 114 56 155 1.63e-13 69.7
MS.gene030128.t1 AT5G39700 33.088 136 75 4 5 125 33 167 1.71e-13 67.4
MS.gene030128.t1 AT1G69560 33.884 121 64 4 24 132 105 221 2.03e-13 69.3
MS.gene030128.t1 AT1G69560 33.884 121 64 4 24 132 121 237 2.22e-13 69.3
MS.gene030128.t1 AT1G26780 37.374 99 49 3 24 110 96 193 5.92e-13 68.2
MS.gene030128.t1 AT5G67300 33.654 104 56 2 23 114 3 105 6.35e-13 67.4
MS.gene030128.t1 AT1G26780 37.374 99 49 3 24 110 96 193 9.42e-13 66.6
MS.gene030128.t1 AT2G39880 28.723 188 113 8 26 198 50 231 1.40e-12 67.0
MS.gene030128.t1 AT1G17950 36.190 105 54 3 26 118 5 108 2.33e-12 65.5
MS.gene030128.t1 AT3G09230 36.538 104 53 3 23 114 52 154 3.16e-12 65.9
MS.gene030128.t1 AT2G25230 32.456 114 64 3 23 124 23 135 3.23e-12 64.7
MS.gene030128.t1 AT3G50060 33.654 104 56 3 23 114 3 105 3.47e-12 65.5
MS.gene030128.t1 AT1G73410 37.963 108 48 4 26 118 6 109 4.20e-12 64.3
MS.gene030128.t1 AT1G73410 37.143 105 53 3 26 118 6 109 1.09e-11 62.8
MS.gene030128.t1 AT5G40360 27.869 122 75 3 6 115 138 258 2.83e-11 63.2
MS.gene030128.t1 AT4G33450 30.345 145 82 4 6 138 5 142 2.92e-11 62.4
MS.gene030128.t1 AT1G22640 45.070 71 27 2 70 128 1 71 9.03e-11 60.1
MS.gene030128.t1 AT1G14350 34.959 123 61 5 29 137 28 145 9.69e-11 61.6
MS.gene030128.t1 AT1G14350 34.959 123 61 5 29 137 28 145 9.69e-11 61.6

Find 60 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGATTCATTTGAGAATA+AGG 0.220030 8.4:+11374779 MS.gene030128:CDS
GGTGTCAACATTATCGGATT+TGG 0.250594 8.4:+11374800 MS.gene030128:CDS
CTTTGCATCCACGTGTTGTT+TGG 0.278668 8.4:-11374981 None:intergenic
CCTTAATCTGCAACTCTTAC+CGG 0.284466 8.4:-11373944 None:intergenic
TAATAATTTGAATTAGCATT+AGG 0.308302 8.4:-11374867 None:intergenic
GGAGAATCAATGGATGTAAA+AGG 0.315475 8.4:+11373230 None:intergenic
AATAATTTGAATTAGCATTA+GGG 0.316977 8.4:-11374866 None:intergenic
TTCTCATCAACTTAGCTTCT+CGG 0.318392 8.4:+11374896 MS.gene030128:CDS
ACCGGTTACCCCAACGAGTA+TGG 0.324396 8.4:-11374041 None:intergenic
CCACGTGTTGTTTGGCTCCA+TGG 0.354528 8.4:-11374973 None:intergenic
GTGTCAACATTATCGGATTT+GGG 0.369512 8.4:+11374801 MS.gene030128:CDS
CACGTCGCATTTGAGTTGTT+TGG 0.369835 8.4:-11374514 None:intergenic
GAATAAGGTGTCAACATTAT+CGG 0.381527 8.4:+11374794 MS.gene030128:CDS
TCTCGAGCTCCATACTCGTT+GGG 0.385217 8.4:+11374032 MS.gene030128:CDS
AGGACACCATGCGCTACCTT+TGG 0.391149 8.4:+11374553 MS.gene030128:CDS
CGGTCCAAGGACCTCTTCTA+AGG 0.411951 8.4:-11373307 None:intergenic
GATTGTATCACAAGCCCGTC+TGG 0.440427 8.4:+11374918 MS.gene030128:CDS
CGTGAATAGCAAGCAATTCA+AGG 0.449225 8.4:+11374533 MS.gene030128:CDS
ATGTTTCCACGTCTAACATC+GGG 0.453593 8.4:-11373985 None:intergenic
CATCCTCTTCACTACTCATA+AGG 0.460455 8.4:-11373277 None:intergenic
TTCTCGAGCTCCATACTCGT+TGG 0.464638 8.4:+11374031 MS.gene030128:CDS
ATTAATGGATTTCCAATCCA+TGG 0.471132 8.4:+11374956 MS.gene030128:CDS
AGGTCCTTGGACCGTGGATG+AGG 0.483198 8.4:+11373316 MS.gene030128:CDS
ATAATATTTACCAGCAGAGT+TGG 0.487488 8.4:-11373396 None:intergenic
CCGGTAAGAGTTGCAGATTA+AGG 0.490055 8.4:+11373944 MS.gene030128:CDS
TGTTGTTTGGCTCCATGGAT+TGG 0.498220 8.4:-11374968 None:intergenic
CTACTCATGGTGAAGGTCGT+TGG 0.502603 8.4:+11373363 MS.gene030128:CDS
TCAATGGATGTAAAAGGAAG+AGG 0.504187 8.4:+11373236 None:intergenic
AATACCCTCGCCAACTCTGC+TGG 0.506355 8.4:+11373386 MS.gene030128:CDS
AACAACACGTGGATGCAAAG+TGG 0.511089 8.4:+11374984 MS.gene030128:CDS
ATGAATTACATTGCTACTCA+TGG 0.522275 8.4:+11373350 MS.gene030128:CDS
GAGTAGTGAAGAGGATGAGA+TGG 0.523912 8.4:+11373283 MS.gene030128:CDS
ATATTAGGTCTCAAACGAAC+CGG 0.530231 8.4:+11373925 MS.gene030128:intron
CGACTAGCCTCGGCATCCAA+AGG 0.537317 8.4:-11374569 None:intergenic
GATGTTTCCACGTCTAACAT+CGG 0.539759 8.4:-11373986 None:intergenic
ACAACACGTGGATGCAAAGT+GGG 0.544322 8.4:+11374985 MS.gene030128:CDS
TGGACCTTAGAAGAGGTCCT+TGG 0.547752 8.4:+11373303 MS.gene030128:CDS
TGCGCTACCTTTGGATGCCG+AGG 0.557604 8.4:+11374562 MS.gene030128:CDS
AAGTCCTCATCCACGGTCCA+AGG 0.564665 8.4:-11373320 None:intergenic
CAACCTTATGAGTAGTGAAG+AGG 0.569142 8.4:+11373274 MS.gene030128:CDS
ATTTACCAGCAGAGTTGGCG+AGG 0.570629 8.4:-11373391 None:intergenic
TACATTGCTACTCATGGTGA+AGG 0.576865 8.4:+11373356 MS.gene030128:CDS
TAGAAGAGGTCCTTGGACCG+TGG 0.586488 8.4:+11373310 MS.gene030128:CDS
TGAATACGTTCGACTAGCCT+CGG 0.590922 8.4:-11374579 None:intergenic
CGGCATCCAAAGGTAGCGCA+TGG 0.593311 8.4:-11374559 None:intergenic
CTCCGCCCCGATGTTAGACG+TGG 0.599725 8.4:+11373979 MS.gene030128:CDS
CTCGAGCTCCATACTCGTTG+GGG 0.606500 8.4:+11374033 MS.gene030128:CDS
GAGAAGCTAAGTTGATGAGA+AGG 0.613417 8.4:-11374894 None:intergenic
CTTGAGAAAACAATCCAGAC+GGG 0.614227 8.4:-11374932 None:intergenic
GAGTAGCAATGTAATTCATG+AGG 0.616394 8.4:-11373346 None:intergenic
CCATGGAGCCAAACAACACG+TGG 0.620461 8.4:+11374973 MS.gene030128:CDS
CCTTGAGAAAACAATCCAGA+CGG 0.624342 8.4:-11374933 None:intergenic
GATGAGATGGACCTTAGAAG+AGG 0.635141 8.4:+11373296 MS.gene030128:CDS
GTAAGAGTTGCAGATTAAGG+TGG 0.637890 8.4:+11373947 MS.gene030128:CDS
AGTAGCAATGTAATTCATGA+GGG 0.639227 8.4:-11373345 None:intergenic
GAGGGTTAAGTCCTCATCCA+CGG 0.648641 8.4:-11373327 None:intergenic
TTTACCAGCAGAGTTGGCGA+GGG 0.653027 8.4:-11373390 None:intergenic
CAACACGTGGATGCAAAGTG+GGG 0.667014 8.4:+11374986 MS.gene030128:CDS
TGTTTCCACGTCTAACATCG+GGG 0.724931 8.4:-11373984 None:intergenic
TTCCACGTCTAACATCGGGG+CGG 0.772697 8.4:-11373981 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATGAAATTAAAAATTAT+TGG + chr8.4:11374469-11374488 MS.gene030128:CDS 10.0%
!! CTACAATATAATATAAAATT+CGG + chr8.4:11373801-11373820 MS.gene030128:intron 10.0%
!! CTTAAAATTTATATTATTAC+CGG - chr8.4:11374062-11374081 None:intergenic 10.0%
!! TATATTTGTAAAATTTGAAT+TGG - chr8.4:11374175-11374194 None:intergenic 10.0%
!! AAAGATTATTTGTTTAATGA+TGG + chr8.4:11374398-11374417 MS.gene030128:intron 15.0%
!! AAATACTAATAGGATTTATA+CGG - chr8.4:11373845-11373864 None:intergenic 15.0%
!! AATAATTTGAATTAGCATTA+GGG - chr8.4:11374869-11374888 None:intergenic 15.0%
!! ATAATCTTTGTCAAAATTAA+TGG - chr8.4:11374387-11374406 None:intergenic 15.0%
!! ATCAATTAAAAATAAATGTC+TGG + chr8.4:11374232-11374251 MS.gene030128:intron 15.0%
!! GAAAAAAGGAAAAAATAAAA+TGG + chr8.4:11373721-11373740 MS.gene030128:intron 15.0%
!! TAATAATTTGAATTAGCATT+AGG - chr8.4:11374870-11374889 None:intergenic 15.0%
!! TCAATTAAAAATAAATGTCT+GGG + chr8.4:11374233-11374252 MS.gene030128:intron 15.0%
!!! AACATTAATCATATGATTTT+TGG - chr8.4:11373762-11373781 None:intergenic 15.0%
!!! TTTTAATTGATTTTTTTTGG+TGG - chr8.4:11374264-11374283 None:intergenic 15.0%
!! AATACCTCATACAATAATAA+CGG + chr8.4:11374648-11374667 MS.gene030128:intron 20.0%
!! AATACTAATAGGATTTATAC+GGG - chr8.4:11373844-11373863 None:intergenic 20.0%
!! AATTCATAGTTTATAGTTGT+TGG - chr8.4:11374696-11374715 None:intergenic 20.0%
!! ATATATATTGTGATATGCAT+TGG + chr8.4:11373584-11373603 MS.gene030128:intron 20.0%
!! GACAAAATACAAATACTAAT+AGG - chr8.4:11373855-11373874 None:intergenic 20.0%
!! GATTAGAAGAAGAAAATAAT+TGG - chr8.4:11374317-11374336 None:intergenic 20.0%
!! TAATGAAAAGAAGTGATAAA+AGG - chr8.4:11373485-11373504 None:intergenic 20.0%
!! TGAAATTTGTCAATATTCAT+TGG + chr8.4:11373671-11373690 MS.gene030128:intron 20.0%
!!! AAAGCTCATAAATACATTTT+TGG - chr8.4:11374102-11374121 None:intergenic 20.0%
!!! ATTAATCATATGATTTTTGG+TGG - chr8.4:11373759-11373778 None:intergenic 20.0%
!!! ATTTTTAATTGATTGATGCA+TGG - chr8.4:11374225-11374244 None:intergenic 20.0%
!!! TTGCATTCTTTTGTTATATT+AGG + chr8.4:11373910-11373929 MS.gene030128:intron 20.0%
! AAAATAGCTCAATATTTACC+AGG + chr8.4:11374438-11374457 MS.gene030128:intron 25.0%
! ATCAGATTCATTTGAGAATA+AGG + chr8.4:11374779-11374798 MS.gene030128:CDS 25.0%
! ATTCATTGGATATAATTGCT+TGG + chr8.4:11373685-11373704 MS.gene030128:intron 25.0%
! GTTATTATTGTATGAGGTAT+TGG - chr8.4:11374649-11374668 None:intergenic 25.0%
! TAGCTAGGTTTATAATAAGT+TGG + chr8.4:11373642-11373661 MS.gene030128:intron 25.0%
! TCCACATGTATCATATAATA+AGG - chr8.4:11373610-11373629 None:intergenic 25.0%
!! ATTGTTTTCTCAAGGATTAA+TGG + chr8.4:11374941-11374960 MS.gene030128:CDS 25.0%
!! GCTTTTCAATGGTAATTTAA+TGG - chr8.4:11373531-11373550 None:intergenic 25.0%
!! TCAATGGTAATTTAATGGAT+CGG - chr8.4:11373526-11373545 None:intergenic 25.0%
!!! ATTTTAAGAGTTTCATATGC+CGG + chr8.4:11374074-11374093 MS.gene030128:intron 25.0%
!!! CATAAATACATTTTTGGTTC+CGG - chr8.4:11374096-11374115 None:intergenic 25.0%
!!! TTTTTCCTTTTTTCACAAGT+GGG - chr8.4:11373715-11373734 None:intergenic 25.0%
!!! TTTTTTCCTTTTTTCACAAG+TGG - chr8.4:11373716-11373735 None:intergenic 25.0%
ACTCTGCTGGTAAATATTAT+TGG + chr8.4:11373399-11373418 MS.gene030128:intron 30.0%
AGTAGCAATGTAATTCATGA+GGG - chr8.4:11373348-11373367 None:intergenic 30.0%
ATAATATTTACCAGCAGAGT+TGG - chr8.4:11373399-11373418 None:intergenic 30.0%
ATGAATTACATTGCTACTCA+TGG + chr8.4:11373350-11373369 MS.gene030128:CDS 30.0%
ATTGATGCATGGATAATGTT+CGG - chr8.4:11374214-11374233 None:intergenic 30.0%
GTATAACTTTGTGTCATATG+TGG - chr8.4:11374732-11374751 None:intergenic 30.0%
! CTTCTTTTCATTACCACAAA+TGG + chr8.4:11373492-11373511 MS.gene030128:intron 30.0%
! GAATAAGGTGTCAACATTAT+CGG + chr8.4:11374794-11374813 MS.gene030128:CDS 30.0%
! GCCTTATTATATGATACATG+TGG + chr8.4:11373606-11373625 MS.gene030128:intron 30.0%
! TTTTCATTACCACAAATGGA+TGG + chr8.4:11373496-11373515 MS.gene030128:intron 30.0%
!! ATTAATGGATTTCCAATCCA+TGG + chr8.4:11374956-11374975 MS.gene030128:CDS 30.0%
!!! AATCATATGATTTTTGGTGG+AGG - chr8.4:11373756-11373775 None:intergenic 30.0%
AGTCACAAAACCACAAACTT+TGG - chr8.4:11373553-11373572 None:intergenic 35.0%
ATATTAGGTCTCAAACGAAC+CGG + chr8.4:11373925-11373944 MS.gene030128:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG - chr8.4:11374459-11374478 None:intergenic 35.0%
CATTGAAAAGCCAAAGTTTG+TGG + chr8.4:11373540-11373559 MS.gene030128:intron 35.0%
CTAATTCAGCTTCACGAAAT+TGG - chr8.4:11374151-11374170 None:intergenic 35.0%
GAGTAGCAATGTAATTCATG+AGG - chr8.4:11373349-11373368 None:intergenic 35.0%
GTGTCAACATTATCGGATTT+GGG + chr8.4:11374801-11374820 MS.gene030128:CDS 35.0%
TAATAACGGCAGCAAAATGA+CGG + chr8.4:11374662-11374681 MS.gene030128:intron 35.0%
TAGAGAGAAGAGGCTAATTT+AGG - chr8.4:11373428-11373447 None:intergenic 35.0%
TTCTCATCAACTTAGCTTCT+CGG + chr8.4:11374896-11374915 MS.gene030128:CDS 35.0%
!! TAATGATGGATTGCATCAGA+TGG + chr8.4:11374412-11374431 MS.gene030128:intron 35.0%
!!! CACAAACTTTGGCTTTTCAA+TGG - chr8.4:11373542-11373561 None:intergenic 35.0%
AATAACGGCAGCAAAATGAC+GGG + chr8.4:11374663-11374682 MS.gene030128:intron 40.0%
ATCACATAGGTAGAGAGAAG+AGG - chr8.4:11373438-11373457 None:intergenic 40.0%
ATCGGATAACCATCCATTTG+TGG - chr8.4:11373508-11373527 None:intergenic 40.0%
ATGTTTCCACGTCTAACATC+GGG - chr8.4:11373988-11374007 None:intergenic 40.0%
CAACCTTATGAGTAGTGAAG+AGG + chr8.4:11373274-11373293 MS.gene030128:CDS 40.0%
CATCCTCTTCACTACTCATA+AGG - chr8.4:11373280-11373299 None:intergenic 40.0%
CCTTAATCTGCAACTCTTAC+CGG - chr8.4:11373947-11373966 None:intergenic 40.0%
CCTTGAGAAAACAATCCAGA+CGG - chr8.4:11374936-11374955 None:intergenic 40.0%
CGTGAATAGCAAGCAATTCA+AGG + chr8.4:11374533-11374552 MS.gene030128:CDS 40.0%
CTTGAGAAAACAATCCAGAC+GGG - chr8.4:11374935-11374954 None:intergenic 40.0%
GATGTTTCCACGTCTAACAT+CGG - chr8.4:11373989-11374008 None:intergenic 40.0%
GCTGCCGTTATTATTGTATG+AGG - chr8.4:11374655-11374674 None:intergenic 40.0%
GGATGTAATTGTCTCTAGCT+AGG + chr8.4:11373627-11373646 MS.gene030128:intron 40.0%
GGTGTCAACATTATCGGATT+TGG + chr8.4:11374800-11374819 MS.gene030128:CDS 40.0%
GTAAGAGTTGCAGATTAAGG+TGG + chr8.4:11373947-11373966 MS.gene030128:CDS 40.0%
TACATTGCTACTCATGGTGA+AGG + chr8.4:11373356-11373375 MS.gene030128:CDS 40.0%
TCTCTCTACCTATGTGATTG+TGG + chr8.4:11373440-11373459 MS.gene030128:intron 40.0%
! AGTTGTGTTGCTGTTCTCTA+GGG - chr8.4:11374754-11374773 None:intergenic 40.0%
!! ATTGTATGAGGTATTGGTCG+CGG - chr8.4:11374643-11374662 None:intergenic 40.0%
!! GAGAAGCTAAGTTGATGAGA+AGG - chr8.4:11374897-11374916 None:intergenic 40.0%
!!! GGGACTCATCTGACATTTTT+TGG + chr8.4:11375006-11375025 MS.gene030128:CDS 40.0%
AACAACACGTGGATGCAAAG+TGG + chr8.4:11374984-11375003 MS.gene030128:CDS 45.0%
ACAACACGTGGATGCAAAGT+GGG + chr8.4:11374985-11375004 MS.gene030128:CDS 45.0%
CCGGTAAGAGTTGCAGATTA+AGG + chr8.4:11373944-11373963 MS.gene030128:CDS 45.0%
GAGTAGTGAAGAGGATGAGA+TGG + chr8.4:11373283-11373302 MS.gene030128:CDS 45.0%
GATGAGATGGACCTTAGAAG+AGG + chr8.4:11373296-11373315 MS.gene030128:CDS 45.0%
TACGTGCACCACAATCACAT+AGG - chr8.4:11373451-11373470 None:intergenic 45.0%
TGTTTCCACGTCTAACATCG+GGG - chr8.4:11373987-11374006 None:intergenic 45.0%
! CAGTTGTGTTGCTGTTCTCT+AGG - chr8.4:11374755-11374774 None:intergenic 45.0%
! CCGTCTGGATTGTTTTCTCA+AGG + chr8.4:11374933-11374952 MS.gene030128:CDS 45.0%
! CTTTGCATCCACGTGTTGTT+TGG - chr8.4:11374984-11375003 None:intergenic 45.0%
! TGTTGTTTGGCTCCATGGAT+TGG - chr8.4:11374971-11374990 None:intergenic 45.0%
!! CACGTCGCATTTGAGTTGTT+TGG - chr8.4:11374517-11374536 None:intergenic 45.0%
!! TGAATACGTTCGACTAGCCT+CGG - chr8.4:11374582-11374601 None:intergenic 45.0%
!!! TATTTTTAATTGATTTTTTT+TGG - chr8.4:11374267-11374286 None:intergenic 5.0%
ATTTACCAGCAGAGTTGGCG+AGG - chr8.4:11373394-11373413 None:intergenic 50.0%
CAACACGTGGATGCAAAGTG+GGG + chr8.4:11374986-11375005 MS.gene030128:CDS 50.0%
CTACTCATGGTGAAGGTCGT+TGG + chr8.4:11373363-11373382 MS.gene030128:CDS 50.0%
GAGGGTTAAGTCCTCATCCA+CGG - chr8.4:11373330-11373349 None:intergenic 50.0%
GATTGTATCACAAGCCCGTC+TGG + chr8.4:11374918-11374937 MS.gene030128:CDS 50.0%
TCCATACTCGTTGGGGTAAC+CGG + chr8.4:11374040-11374059 MS.gene030128:intron 50.0%
TCTCGAGCTCCATACTCGTT+GGG + chr8.4:11374032-11374051 MS.gene030128:CDS 50.0%
TGGACCTTAGAAGAGGTCCT+TGG + chr8.4:11373303-11373322 MS.gene030128:CDS 50.0%
TTCTCGAGCTCCATACTCGT+TGG + chr8.4:11374031-11374050 MS.gene030128:CDS 50.0%
TTTACCAGCAGAGTTGGCGA+GGG - chr8.4:11373393-11373412 None:intergenic 50.0%
AAGTCCTCATCCACGGTCCA+AGG - chr8.4:11373323-11373342 None:intergenic 55.0%
AATACCCTCGCCAACTCTGC+TGG + chr8.4:11373386-11373405 MS.gene030128:CDS 55.0%
ACCGGTTACCCCAACGAGTA+TGG - chr8.4:11374044-11374063 None:intergenic 55.0%
AGGACACCATGCGCTACCTT+TGG + chr8.4:11374553-11374572 MS.gene030128:CDS 55.0%
CCATGGAGCCAAACAACACG+TGG + chr8.4:11374973-11374992 MS.gene030128:CDS 55.0%
CGGTCCAAGGACCTCTTCTA+AGG - chr8.4:11373310-11373329 None:intergenic 55.0%
CTCGAGCTCCATACTCGTTG+GGG + chr8.4:11374033-11374052 MS.gene030128:CDS 55.0%
GCGCGCCCACTTGTGAAAAA+AGG + chr8.4:11373707-11373726 MS.gene030128:intron 55.0%
TAGAAGAGGTCCTTGGACCG+TGG + chr8.4:11373310-11373329 MS.gene030128:CDS 55.0%
TTCCACGTCTAACATCGGGG+CGG - chr8.4:11373984-11374003 None:intergenic 55.0%
!! CCACGTGTTGTTTGGCTCCA+TGG - chr8.4:11374976-11374995 None:intergenic 55.0%
!! GTATGAGGTATTGGTCGCGG+TGG - chr8.4:11374640-11374659 None:intergenic 55.0%
AGGTCCTTGGACCGTGGATG+AGG + chr8.4:11373316-11373335 MS.gene030128:CDS 60.0%
CGGCATCCAAAGGTAGCGCA+TGG - chr8.4:11374562-11374581 None:intergenic 60.0%
TGCGCTACCTTTGGATGCCG+AGG + chr8.4:11374562-11374581 MS.gene030128:CDS 60.0%
!! CGACTAGCCTCGGCATCCAA+AGG - chr8.4:11374572-11374591 None:intergenic 60.0%
ATTGGTCGCGGTGGCTGTGG+TGG - chr8.4:11374631-11374650 None:intergenic 65.0%
CTCCGCCCCGATGTTAGACG+TGG + chr8.4:11373979-11373998 MS.gene030128:CDS 65.0%
!! GGCTGTGGTGGTGGTGGTAG+TGG - chr8.4:11374619-11374638 None:intergenic 65.0%
!! GGTATTGGTCGCGGTGGCTG+TGG - chr8.4:11374634-11374653 None:intergenic 65.0%
!! GGTGGTAGTGGCAGCAGCAG+CGG - chr8.4:11374607-11374626 None:intergenic 65.0%
GGTCGCGGTGGCTGTGGTGG+TGG - chr8.4:11374628-11374647 None:intergenic 75.0%
!! CGCGGTGGCTGTGGTGGTGG+TGG - chr8.4:11374625-11374644 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 11373239 11375082 11373239 ID=MS.gene030128
chr8.4 mRNA 11373239 11375082 11373239 ID=MS.gene030128.t1;Parent=MS.gene030128
chr8.4 exon 11373239 11373407 11373239 ID=MS.gene030128.t1.exon1;Parent=MS.gene030128.t1
chr8.4 CDS 11373239 11373407 11373239 ID=cds.MS.gene030128.t1;Parent=MS.gene030128.t1
chr8.4 exon 11373932 11374054 11373932 ID=MS.gene030128.t1.exon2;Parent=MS.gene030128.t1
chr8.4 CDS 11373932 11374054 11373932 ID=cds.MS.gene030128.t1;Parent=MS.gene030128.t1
chr8.4 exon 11374460 11374594 11374460 ID=MS.gene030128.t1.exon3;Parent=MS.gene030128.t1
chr8.4 CDS 11374460 11374594 11374460 ID=cds.MS.gene030128.t1;Parent=MS.gene030128.t1
chr8.4 exon 11374757 11375082 11374757 ID=MS.gene030128.t1.exon4;Parent=MS.gene030128.t1
chr8.4 CDS 11374757 11375082 11374757 ID=cds.MS.gene030128.t1;Parent=MS.gene030128.t1
Gene Sequence

>MS.gene030128

ATGGATGTAAAAGGAAGAGGAAGCGACAACAAAAACAACCTTATGAGTAGTGAAGAGGATGAGATGGACCTTAGAAGAGGTCCTTGGACCGTGGATGAGGACTTAACCCTCATGAATTACATTGCTACTCATGGTGAAGGTCGTTGGAATACCCTCGCCAACTCTGCTGGTAAATATTATTGGTTTCCTAAATTAGCCTCTTCTCTCTACCTATGTGATTGTGGTGCACGTACTTAATTAGTTCCTTTTATCACTTCTTTTCATTACCACAAATGGATGGTTATCCGATCCATTAAATTACCATTGAAAAGCCAAAGTTTGTGGTTTTGTGACTATAATAGTGAAATATATATTGTGATATGCATTGGCCTTATTATATGATACATGTGGATGTAATTGTCTCTAGCTAGGTTTATAATAAGTTGGCATATATGAAATTTGTCAATATTCATTGGATATAATTGCTTGGCGCGCCCACTTGTGAAAAAAGGAAAAAATAAAATGGATTGATACACCTCCACCAAAAATCATATGATTAATGTTTCTTGAGAAAAAGAAAGTACTACAATATAATATAAAATTCGGACTCTCTTTCTATTTTACCCGTATAAATCCTATTAGTATTTGTATTTTGTCATAATATATATCGAGTCTTTATCAGCATGAGTAATTTGCATTCTTTTGTTATATTAGGTCTCAAACGAACCGGTAAGAGTTGCAGATTAAGGTGGCTTAATTATCTCCGCCCCGATGTTAGACGTGGAAACATCACACTTGAAGAACAACTTTTGATTCTCGAGCTCCATACTCGTTGGGGTAACCGGTAATAATATAAATTTTAAGAGTTTCATATGCCGGAACCAAAAATGTATTTATGAGCTTTAATTAAAACATTTTTCATCTTATAAACCAATTTCGTGAAGCTGAATTAGTCCAATTCAAATTTTACAAATATATATATATATATATATGCCGAACATTATCCATGCATCAATCAATTAAAAATAAATGTCTGGGATTCACCACCAAAAAAAATCAATTAAAAATAAATATCATTATTTTTAAACAAAATATACCAATTATTTTCTTCTTCTAATCATTTAACAAAGTGTTTCATTTTATCTATTTTAGATTTTTTTTTTTAACCATTAATTTTGACAAAGATTATTTGTTTAATGATGGATTGCATCAGATGGTCGAAAATAGCTCAATATTTACCAGGAAGAACAGACAATGAAATTAAAAATTATTGGAGAACTCGTGTTCAAAAGCTTGCCAAACAACTCAAATGCGACGTGAATAGCAAGCAATTCAAGGACACCATGCGCTACCTTTGGATGCCGAGGCTAGTCGAACGTATTCAAGCCGCTGCTGCTGCCACTACCACCACCACCACAGCCACCGCGACCAATACCTCATACAATAATAACGGCAGCAAAATGACGGGTTCAACTCCAACAACTATAAACTATGAATTTATGAGTTCACAACCACATATGACACAAAGTTATACCCTAGAGAACAGCAACACAACTGCATCATCAGATTCATTTGAGAATAAGGTGTCAACATTATCGGATTTGGGTGATAATAATTATTATTGTACAAGTGTTAGTAATAAGAATAACCCTAATGCTAATTCAAATTATTATCAACCTTCTCATCAACTTAGCTTCTCGGATTGTATCACAAGCCCGTCTGGATTGTTTTCTCAAGGATTAATGGATTTCCAATCCATGGAGCCAAACAACACGTGGATGCAAAGTGGGGACTCATCTGACATTTTTTGGAATGCTGAGAACATGTTGTTTTTACAGCAACAACTCATGAACGACACAATGTAA
Protein sequence

>MS.gene030128.t1

MDVKGRGSDNKNNLMSSEEDEMDLRRGPWTVDEDLTLMNYIATHGEGRWNTLANSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGRTDNEIKNYWRTRVQKLAKQLKCDVNSKQFKDTMRYLWMPRLVEQNSNTTASSDSFENKVSTLSDLGDNNYYCTSVSNKNNPNANSNYYQPSHQLSFSDCITSPSGLFSQGLMDFQSMEPNNTWMQSGDSSDIFWNAENMLFLQQQLMNDTM