Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030453.t1 | XP_024628067.1 | 96.3 | 375 | 14 | 0 | 1 | 375 | 16 | 390 | 3.50E-204 | 720.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030453.t1 | B9DI20 | 45.5 | 308 | 120 | 10 | 8 | 294 | 20 | 300 | 8.5e-58 | 225.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030453.t1 | A0A072TVW9 | 96.3 | 375 | 14 | 0 | 1 | 375 | 16 | 390 | 2.5e-204 | 720.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene030453.t1 | TF | SBP |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030453.t1 | MTR_8g096780 | 98.933 | 375 | 4 | 0 | 1 | 375 | 16 | 390 | 0.0 | 774 |
| MS.gene030453.t1 | MTR_3g099080 | 59.091 | 396 | 107 | 21 | 1 | 375 | 15 | 376 | 1.33e-130 | 379 |
| MS.gene030453.t1 | MTR_7g028740 | 49.741 | 193 | 91 | 5 | 29 | 219 | 25 | 213 | 1.30e-49 | 171 |
| MS.gene030453.t1 | MTR_8g066240 | 87.755 | 98 | 12 | 0 | 27 | 124 | 5 | 102 | 2.11e-43 | 146 |
| MS.gene030453.t1 | MTR_2g461920 | 59.231 | 130 | 48 | 2 | 30 | 159 | 122 | 246 | 1.63e-38 | 145 |
| MS.gene030453.t1 | MTR_4g109770 | 54.887 | 133 | 48 | 4 | 30 | 159 | 75 | 198 | 3.78e-37 | 140 |
| MS.gene030453.t1 | MTR_5g046670 | 47.712 | 153 | 75 | 3 | 30 | 181 | 194 | 342 | 5.64e-35 | 134 |
| MS.gene030453.t1 | MTR_1g035010 | 67.901 | 81 | 26 | 0 | 84 | 164 | 104 | 184 | 6.31e-33 | 130 |
| MS.gene030453.t1 | MTR_3g085180 | 56.311 | 103 | 42 | 2 | 83 | 182 | 164 | 266 | 1.18e-32 | 127 |
| MS.gene030453.t1 | MTR_7g092930 | 34.138 | 290 | 136 | 9 | 79 | 357 | 63 | 308 | 1.28e-32 | 125 |
| MS.gene030453.t1 | MTR_2g046550 | 52.252 | 111 | 52 | 1 | 51 | 161 | 107 | 216 | 1.48e-32 | 129 |
| MS.gene030453.t1 | MTR_7g444860 | 56.842 | 95 | 41 | 0 | 74 | 168 | 139 | 233 | 1.62e-32 | 124 |
| MS.gene030453.t1 | MTR_7g110320 | 48.837 | 129 | 63 | 2 | 43 | 168 | 101 | 229 | 1.90e-32 | 129 |
| MS.gene030453.t1 | MTR_7g110320 | 48.837 | 129 | 63 | 2 | 43 | 168 | 101 | 229 | 3.27e-32 | 128 |
| MS.gene030453.t1 | MTR_1g086250 | 58.163 | 98 | 41 | 0 | 70 | 167 | 133 | 230 | 4.02e-32 | 128 |
| MS.gene030453.t1 | MTR_8g005960 | 54.867 | 113 | 47 | 1 | 51 | 159 | 150 | 262 | 6.09e-32 | 123 |
| MS.gene030453.t1 | MTR_1g053715 | 62.500 | 88 | 27 | 1 | 84 | 171 | 74 | 155 | 1.26e-31 | 122 |
| MS.gene030453.t1 | MTR_8g463140 | 62.353 | 85 | 32 | 0 | 84 | 168 | 65 | 149 | 3.39e-30 | 114 |
| MS.gene030453.t1 | MTR_4g088555 | 67.568 | 74 | 24 | 0 | 84 | 157 | 63 | 136 | 3.74e-29 | 110 |
| MS.gene030453.t1 | MTR_2g078770 | 61.176 | 85 | 33 | 0 | 84 | 168 | 58 | 142 | 5.51e-29 | 110 |
| MS.gene030453.t1 | MTR_2g014200 | 61.905 | 84 | 32 | 0 | 78 | 161 | 58 | 141 | 6.73e-28 | 107 |
| MS.gene030453.t1 | MTR_8g080690 | 55.435 | 92 | 41 | 0 | 70 | 161 | 137 | 228 | 1.67e-27 | 112 |
| MS.gene030453.t1 | MTR_8g080680 | 33.028 | 218 | 111 | 4 | 84 | 294 | 132 | 321 | 6.44e-24 | 102 |
| MS.gene030453.t1 | MTR_8g080670 | 57.534 | 73 | 31 | 0 | 84 | 156 | 162 | 234 | 1.55e-21 | 95.5 |
| MS.gene030453.t1 | MTR_2g020620 | 52.308 | 65 | 31 | 0 | 93 | 157 | 99 | 163 | 1.89e-17 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030453.t1 | AT5G50670 | 49.057 | 265 | 112 | 7 | 8 | 253 | 20 | 280 | 2.88e-69 | 222 |
| MS.gene030453.t1 | AT5G50670 | 49.057 | 265 | 112 | 7 | 8 | 253 | 20 | 280 | 2.88e-69 | 222 |
| MS.gene030453.t1 | AT5G50570 | 49.057 | 265 | 112 | 7 | 8 | 253 | 20 | 280 | 2.88e-69 | 222 |
| MS.gene030453.t1 | AT5G50570 | 49.057 | 265 | 112 | 7 | 8 | 253 | 20 | 280 | 2.88e-69 | 222 |
| MS.gene030453.t1 | AT1G76580 | 65.591 | 93 | 32 | 0 | 84 | 176 | 114 | 206 | 4.49e-36 | 139 |
| MS.gene030453.t1 | AT1G76580 | 65.591 | 93 | 32 | 0 | 84 | 176 | 114 | 206 | 4.95e-36 | 139 |
| MS.gene030453.t1 | AT1G76580 | 65.591 | 93 | 32 | 0 | 84 | 176 | 114 | 206 | 7.76e-36 | 139 |
| MS.gene030453.t1 | AT3G60030 | 58.716 | 109 | 41 | 1 | 79 | 183 | 122 | 230 | 4.55e-35 | 137 |
| MS.gene030453.t1 | AT2G47070 | 72.152 | 79 | 22 | 0 | 84 | 162 | 106 | 184 | 7.21e-35 | 136 |
| MS.gene030453.t1 | AT1G69170 | 64.444 | 90 | 32 | 0 | 69 | 158 | 109 | 198 | 3.06e-33 | 128 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 5.34e-33 | 126 |
| MS.gene030453.t1 | AT1G20980 | 61.458 | 96 | 36 | 1 | 70 | 164 | 106 | 201 | 5.98e-33 | 130 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 7.77e-33 | 127 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 7.77e-33 | 127 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 7.77e-33 | 127 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 7.77e-33 | 127 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 7.77e-33 | 127 |
| MS.gene030453.t1 | AT1G27370 | 58.889 | 90 | 37 | 0 | 70 | 159 | 162 | 251 | 7.77e-33 | 127 |
| MS.gene030453.t1 | AT1G53160 | 60.227 | 88 | 35 | 0 | 74 | 161 | 44 | 131 | 5.47e-31 | 116 |
| MS.gene030453.t1 | AT1G53160 | 60.227 | 88 | 35 | 0 | 74 | 161 | 44 | 131 | 7.63e-31 | 116 |
| MS.gene030453.t1 | AT1G53160 | 60.227 | 88 | 35 | 0 | 74 | 161 | 44 | 131 | 7.63e-31 | 116 |
| MS.gene030453.t1 | AT2G42200 | 61.905 | 84 | 32 | 0 | 81 | 164 | 71 | 154 | 9.28e-31 | 120 |
| MS.gene030453.t1 | AT3G57920 | 52.885 | 104 | 49 | 0 | 57 | 160 | 32 | 135 | 1.19e-30 | 120 |
| MS.gene030453.t1 | AT1G27360 | 64.557 | 79 | 28 | 0 | 81 | 159 | 172 | 250 | 1.66e-30 | 120 |
| MS.gene030453.t1 | AT1G27360 | 64.557 | 79 | 28 | 0 | 81 | 159 | 172 | 250 | 1.66e-30 | 120 |
| MS.gene030453.t1 | AT1G27360 | 64.557 | 79 | 28 | 0 | 81 | 159 | 172 | 250 | 1.66e-30 | 120 |
| MS.gene030453.t1 | AT1G27360 | 64.557 | 79 | 28 | 0 | 81 | 159 | 172 | 250 | 1.66e-30 | 120 |
| MS.gene030453.t1 | AT1G02065 | 63.095 | 84 | 31 | 0 | 74 | 157 | 178 | 261 | 5.35e-30 | 118 |
| MS.gene030453.t1 | AT5G43270 | 59.302 | 86 | 35 | 0 | 75 | 160 | 160 | 245 | 1.31e-29 | 118 |
| MS.gene030453.t1 | AT5G43270 | 59.302 | 86 | 35 | 0 | 75 | 160 | 160 | 245 | 1.31e-29 | 118 |
| MS.gene030453.t1 | AT5G43270 | 59.302 | 86 | 35 | 0 | 75 | 160 | 160 | 245 | 1.31e-29 | 118 |
| MS.gene030453.t1 | AT2G33810 | 66.216 | 74 | 25 | 0 | 84 | 157 | 54 | 127 | 1.35e-29 | 111 |
| MS.gene030453.t1 | AT3G15270 | 62.162 | 74 | 28 | 0 | 84 | 157 | 63 | 136 | 3.50e-28 | 109 |
| MS.gene030453.t1 | AT5G18830 | 44.944 | 89 | 48 | 1 | 71 | 158 | 125 | 213 | 1.17e-21 | 97.4 |
| MS.gene030453.t1 | AT5G18830 | 44.944 | 89 | 48 | 1 | 71 | 158 | 125 | 213 | 1.20e-21 | 97.4 |
| MS.gene030453.t1 | AT5G18830 | 44.944 | 89 | 48 | 1 | 71 | 158 | 125 | 213 | 1.34e-21 | 97.1 |
| MS.gene030453.t1 | AT2G47070 | 72.727 | 55 | 15 | 0 | 108 | 162 | 1 | 55 | 3.88e-21 | 95.9 |
| MS.gene030453.t1 | AT1G02065 | 41.837 | 98 | 49 | 3 | 42 | 131 | 138 | 235 | 1.19e-15 | 76.3 |
Find 95 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTGTTTCTATGTTGTTTA+AGG | 0.109263 | 4.4:+6761224 | None:intergenic |
| TTTAAACTAACCTTGGTAAT+TGG | 0.163177 | 4.4:+6760099 | None:intergenic |
| GGGGTCTGTGGACTCAGTTT+TGG | 0.232288 | 4.4:-6758257 | MS.gene030453:CDS |
| ACACATGATCATCCTGAAAA+TGG | 0.265481 | 4.4:-6758352 | MS.gene030453:CDS |
| TCTTCATCATCTTCAACTTC+AGG | 0.292841 | 4.4:-6761060 | MS.gene030453:CDS |
| GGTAAATCCACCAACATCTT+TGG | 0.300549 | 4.4:+6761092 | None:intergenic |
| TCCCATTGAAAAGGAAATAA+TGG | 0.301322 | 4.4:+6758145 | None:intergenic |
| AAGCTACTACTTCGAGTAAT+AGG | 0.322521 | 4.4:+6760127 | None:intergenic |
| AATGAAGTTCACATACCTTA+TGG | 0.332097 | 4.4:+6760932 | None:intergenic |
| AAGATGTTGTTCCAAGAAAA+AGG | 0.342659 | 4.4:+6758584 | None:intergenic |
| AGATGATGAAGATGTCATTT+TGG | 0.350943 | 4.4:+6761071 | None:intergenic |
| GGAAATTCTAGCACTGAATC+AGG | 0.359546 | 4.4:-6761126 | MS.gene030453:CDS |
| GATGGTTCAATTAGGAGGTT+TGG | 0.365880 | 4.4:-6761201 | MS.gene030453:CDS |
| AGTTTGCATGACCATAGCTT+GGG | 0.365920 | 4.4:-6758277 | MS.gene030453:CDS |
| CTTGGGTTGGAGGAGATGTT+AGG | 0.371034 | 4.4:-6758660 | MS.gene030453:CDS |
| AAACAATGGATGGTTCAATT+AGG | 0.371347 | 4.4:-6761209 | MS.gene030453:CDS |
| GGGTTCATCATAGCAGTAGA+AGG | 0.377531 | 4.4:+6758685 | None:intergenic |
| CTGCTATGATGAACCCTACT+TGG | 0.380036 | 4.4:-6758678 | MS.gene030453:CDS |
| CTACTTCGAGTAATAGGTTC+TGG | 0.389750 | 4.4:+6760133 | None:intergenic |
| TTTCCCTTCTTTGTAGCTGC+TGG | 0.392060 | 4.4:+6758558 | None:intergenic |
| TTGTTCCTCAATTTATAACT+TGG | 0.392942 | 4.4:-6758212 | MS.gene030453:CDS |
| CATTATTATTCCCCTGAGAA+TGG | 0.393387 | 4.4:+6758176 | None:intergenic |
| TTCTAGTGAATCCCATTCTC+AGG | 0.405544 | 4.4:-6758188 | MS.gene030453:CDS |
| CAGTGGCTGCTGCTGTTGGC+TGG | 0.413457 | 4.4:+6758512 | None:intergenic |
| TTCACAGTGGCTGCTGCTGT+TGG | 0.415317 | 4.4:+6758508 | None:intergenic |
| AAAAGAACCTGCTACATTGC+TGG | 0.422583 | 4.4:+6760863 | None:intergenic |
| TGATCATGTGTTTGTGGTAC+TGG | 0.432050 | 4.4:+6758364 | None:intergenic |
| GTTGGTGTTGATTGTGGCTA+TGG | 0.432534 | 4.4:+6758635 | None:intergenic |
| TTTGGAGATTACAGAACAAA+AGG | 0.434418 | 4.4:-6761183 | MS.gene030453:CDS |
| CAACCAGATGGTGCATTTGT+TGG | 0.454409 | 4.4:+6758617 | None:intergenic |
| ATTATTATTCCCCTGAGAAT+GGG | 0.465602 | 4.4:+6758177 | None:intergenic |
| GAGTTTGCATGACCATAGCT+TGG | 0.466352 | 4.4:-6758278 | MS.gene030453:CDS |
| CTAATCTAATCCCATTGAAA+AGG | 0.467134 | 4.4:+6758136 | None:intergenic |
| CCATGAGTCGCACGTTTAGC+AGG | 0.467652 | 4.4:-6758462 | MS.gene030453:CDS |
| CTTCATCATCTTCAACTTCA+GGG | 0.469448 | 4.4:-6761059 | MS.gene030453:CDS |
| AACTTGAGAATGGTAGCAAT+TGG | 0.470856 | 4.4:+6758719 | None:intergenic |
| AATTGTGACCTGTGCAGTCT+TGG | 0.471856 | 4.4:+6760909 | None:intergenic |
| CGAGTAATAGGTTCTGGTTG+TGG | 0.475165 | 4.4:+6760139 | None:intergenic |
| AAGACTGCACAGGTCACAAT+TGG | 0.475432 | 4.4:-6760907 | MS.gene030453:CDS |
| TGTTCCTCAATTTATAACTT+GGG | 0.485493 | 4.4:-6758211 | MS.gene030453:CDS |
| ATGAACCCTACTTGGGTTGG+AGG | 0.486277 | 4.4:-6758670 | MS.gene030453:CDS |
| ATGAAGGAAAGAGGAGCTGT+AGG | 0.487258 | 4.4:-6760198 | MS.gene030453:CDS |
| GTAACTGTAGAGACTATCAT+AGG | 0.493095 | 4.4:-6760957 | MS.gene030453:CDS |
| TGACCATAGCTTGGGGTCTG+TGG | 0.493672 | 4.4:-6758269 | MS.gene030453:CDS |
| GTCATGCAAACTCAAGCCTA+AGG | 0.500554 | 4.4:+6758288 | None:intergenic |
| TCAGATAGTTTCATGTCTTG+TGG | 0.502100 | 4.4:-6761001 | MS.gene030453:CDS |
| CCTGCTAAACGTGCGACTCA+TGG | 0.502871 | 4.4:+6758462 | None:intergenic |
| CAATGGATGGTTCAATTAGG+AGG | 0.503930 | 4.4:-6761206 | MS.gene030453:CDS |
| TCAACCAGCAGCTACAAAGA+AGG | 0.503966 | 4.4:-6758562 | MS.gene030453:CDS |
| ACTTGAGAATGGTAGCAATT+GGG | 0.507340 | 4.4:+6758720 | None:intergenic |
| GTGCGACTCATGGATGAAGC+TGG | 0.513016 | 4.4:+6758472 | None:intergenic |
| ACACCAACAAATGCACCATC+TGG | 0.516097 | 4.4:-6758620 | MS.gene030453:CDS |
| ACATCTCCTCCAACCCAAGT+AGG | 0.516216 | 4.4:+6758664 | None:intergenic |
| GAGCTAGAGCTATCAACAAT+GGG | 0.520984 | 4.4:-6761026 | MS.gene030453:CDS |
| AGACTATCATAGGCGCCATA+AGG | 0.522041 | 4.4:-6760947 | MS.gene030453:CDS |
| TCAGGATGATCATGTGTTTG+TGG | 0.524418 | 4.4:+6758358 | None:intergenic |
| GCATTTGTTGGTGTTGATTG+TGG | 0.524493 | 4.4:+6758629 | None:intergenic |
| AGCTGTAGGAAACGCTTAGA+TGG | 0.526456 | 4.4:-6760184 | MS.gene030453:CDS |
| ACTGCACAGGTCACAATTGG+TGG | 0.532124 | 4.4:-6760904 | MS.gene030453:CDS |
| AGGAATTTGATGAAGGAAAG+AGG | 0.537908 | 4.4:-6760207 | MS.gene030453:CDS |
| AGAACCCAAGTTATAAATTG+AGG | 0.540593 | 4.4:+6758207 | None:intergenic |
| GGTTCTGCCAGCAATGTAGC+AGG | 0.542918 | 4.4:-6760870 | MS.gene030453:intron |
| ATAGTTTCATGTCTTGTGGA+TGG | 0.552133 | 4.4:-6760997 | MS.gene030453:CDS |
| CATCTCCTCCAACCCAAGTA+GGG | 0.552239 | 4.4:+6758665 | None:intergenic |
| CTCATGGATGAAGCTGGAAG+AGG | 0.554579 | 4.4:+6758478 | None:intergenic |
| GATTTAACTGAAATGGATCA+AGG | 0.556449 | 4.4:-6761249 | None:intergenic |
| TATACATGTGAACTTGAGAA+TGG | 0.557360 | 4.4:+6758709 | None:intergenic |
| GCTCTAGAGGAATTTGATGA+AGG | 0.560175 | 4.4:-6760214 | MS.gene030453:CDS |
| ACAAAGTCCAAAGATGTTGG+TGG | 0.562124 | 4.4:-6761099 | MS.gene030453:CDS |
| CATCAAATTCCTCTAGAGCA+TGG | 0.562487 | 4.4:+6760218 | None:intergenic |
| CTTAAACAACATAGAAACAA+TGG | 0.562677 | 4.4:-6761223 | MS.gene030453:CDS |
| ATGATGAACCCTACTTGGGT+TGG | 0.564738 | 4.4:-6758673 | MS.gene030453:CDS |
| CTTACAAAGTCCAAAGATGT+TGG | 0.572874 | 4.4:-6761102 | MS.gene030453:CDS |
| CAACCAGCAGCTACAAAGAA+GGG | 0.573578 | 4.4:-6758561 | MS.gene030453:CDS |
| TGCTATGATGAACCCTACTT+GGG | 0.579124 | 4.4:-6758677 | MS.gene030453:CDS |
| GGTCTTGTTTATCAACCAGA+TGG | 0.579275 | 4.4:+6758605 | None:intergenic |
| AGAGCTAGAGCTATCAACAA+TGG | 0.587150 | 4.4:-6761027 | MS.gene030453:CDS |
| GAAATTCTAGCACTGAATCA+GGG | 0.589286 | 4.4:-6761125 | MS.gene030453:CDS |
| AGTCCACAGACCCCAAGCTA+TGG | 0.589981 | 4.4:+6758266 | None:intergenic |
| GTTTGCATGACCATAGCTTG+GGG | 0.604245 | 4.4:-6758276 | MS.gene030453:CDS |
| GATTTGAAGCTTGGCCATGT+TGG | 0.605175 | 4.4:-6761147 | MS.gene030453:CDS |
| GTGTAGGTTCCATGCTCTAG+AGG | 0.610810 | 4.4:-6760227 | MS.gene030453:intron |
| TCTAGTGAATCCCATTCTCA+GGG | 0.611691 | 4.4:-6758187 | MS.gene030453:CDS |
| GCTTAGATGGTCACAACCGA+CGG | 0.619901 | 4.4:-6760171 | MS.gene030453:CDS |
| TCATGCAAACTCAAGCCTAA+GGG | 0.620270 | 4.4:+6758289 | None:intergenic |
| GGTTCATCATAGCAGTAGAA+GGG | 0.627296 | 4.4:+6758686 | None:intergenic |
| TGAAAATGGATTGAATCAGA+TGG | 0.631963 | 4.4:-6758338 | MS.gene030453:CDS |
| CAGTGCTAGAATTTCCAACA+TGG | 0.635549 | 4.4:+6761133 | None:intergenic |
| AACAACATAGAAACAATGGA+TGG | 0.636248 | 4.4:-6761219 | MS.gene030453:CDS |
| ACTTCATTCCAAGACTGCAC+AGG | 0.639272 | 4.4:-6760917 | MS.gene030453:CDS |
| CAATTGGTGGACATAAGCAA+AGG | 0.658162 | 4.4:-6760891 | MS.gene030453:CDS |
| TTGGGTTCAAATGATCAGAG+TGG | 0.682356 | 4.4:-6758238 | MS.gene030453:CDS |
| AAGAGGTTGGTTGTTCACAG+TGG | 0.701313 | 4.4:+6758495 | None:intergenic |
| TGGATGAAGCTGGAAGAGGT+TGG | 0.704527 | 4.4:+6758482 | None:intergenic |
| CTAGTGAATCCCATTCTCAG+GGG | 0.746099 | 4.4:-6758186 | MS.gene030453:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAACCATTTATAACTTA+AGG | - | chr4.4:6760366-6760385 | MS.gene030453:intron | 15.0% |
| !! | AATAACCATTTATAACTTAA+GGG | - | chr4.4:6760367-6760386 | MS.gene030453:intron | 15.0% |
| !! | TAGATAAATATTTAGATCAA+AGG | + | chr4.4:6759013-6759032 | None:intergenic | 15.0% |
| !!! | ATCTAACATTTGAAATTTAA+GGG | + | chr4.4:6760174-6760193 | None:intergenic | 15.0% |
| !!! | CAACAATATATTTTTTTATC+AGG | - | chr4.4:6760633-6760652 | MS.gene030453:intron | 15.0% |
| !!! | TATCTAACATTTGAAATTTA+AGG | + | chr4.4:6760175-6760194 | None:intergenic | 15.0% |
| !! | AACATAAATAAGAGAATAAC+CGG | + | chr4.4:6760081-6760100 | None:intergenic | 20.0% |
| !! | ACATAATTTAGAAGTTTACT+AGG | + | chr4.4:6758663-6758682 | None:intergenic | 20.0% |
| !! | ATAACCATTTATAACTTAAG+GGG | - | chr4.4:6760368-6760387 | MS.gene030453:intron | 20.0% |
| !! | ATGATTAAAAAAGAAACTTG+AGG | - | chr4.4:6760472-6760491 | MS.gene030453:intron | 20.0% |
| !! | ATTATTCATGATTGAAATTC+CGG | - | chr4.4:6760059-6760078 | MS.gene030453:intron | 20.0% |
| !! | CTCATATAAAGTAGTATATA+TGG | + | chr4.4:6759981-6760000 | None:intergenic | 20.0% |
| !! | CTTTATCAGTATTAATGATT+TGG | - | chr4.4:6760543-6760562 | MS.gene030453:intron | 20.0% |
| !! | GAGATCAAATAAAATGAAAA+AGG | - | chr4.4:6760437-6760456 | MS.gene030453:intron | 20.0% |
| !! | TACAAATACAATACAATACA+AGG | + | chr4.4:6759729-6759748 | None:intergenic | 20.0% |
| !! | TCCTTCTTGTTAAAATATAA+TGG | + | chr4.4:6760304-6760323 | None:intergenic | 20.0% |
| !! | TGATTAAAAAAGAAACTTGA+GGG | - | chr4.4:6760473-6760492 | MS.gene030453:intron | 20.0% |
| !! | TTAATAAATTAAACCAAACC+AGG | - | chr4.4:6759885-6759904 | MS.gene030453:intron | 20.0% |
| !!! | AATTAACAAGTGTTTTAGTA+AGG | + | chr4.4:6758868-6758887 | None:intergenic | 20.0% |
| !!! | AGAAATATCACTTCTTTTTT+TGG | + | chr4.4:6759837-6759856 | None:intergenic | 20.0% |
| !!! | AGTTTCTTTTTTAATCATGT+TGG | + | chr4.4:6760470-6760489 | None:intergenic | 20.0% |
| !!! | ATTAACAAGTGTTTTAGTAA+GGG | + | chr4.4:6758867-6758886 | None:intergenic | 20.0% |
| !!! | ATTTTATCTGATTTTGCATA+TGG | - | chr4.4:6758979-6758998 | MS.gene030453:intron | 20.0% |
| !!! | ATTTTGTATCTTTCTGAAAA+AGG | + | chr4.4:6760948-6760967 | None:intergenic | 20.0% |
| !!! | GAAATATCACTTCTTTTTTT+GGG | + | chr4.4:6759836-6759855 | None:intergenic | 20.0% |
| !!! | GTTTCTTTTTTAATCATGTT+GGG | + | chr4.4:6760469-6760488 | None:intergenic | 20.0% |
| ! | ATCTACTAGTAAGATTTAGA+TGG | + | chr4.4:6759067-6759086 | None:intergenic | 25.0% |
| ! | ATGAAGTTAGCATGAATAAT+GGG | + | chr4.4:6758695-6758714 | None:intergenic | 25.0% |
| ! | CAAAAATTACATAATGCACT+TGG | - | chr4.4:6759418-6759437 | MS.gene030453:intron | 25.0% |
| ! | CAAACGAAAAATAGACAAAA+GGG | + | chr4.4:6760257-6760276 | None:intergenic | 25.0% |
| ! | CTATAACTTTAAACTAACCT+TGG | + | chr4.4:6759289-6759308 | None:intergenic | 25.0% |
| ! | CTTAAACAACATAGAAACAA+TGG | - | chr4.4:6758155-6758174 | MS.gene030453:CDS | 25.0% |
| ! | GTTAAAATATAATGGCACAT+AGG | + | chr4.4:6760296-6760315 | None:intergenic | 25.0% |
| ! | TAACCATTTATAACTTAAGG+GGG | - | chr4.4:6760369-6760388 | MS.gene030453:intron | 25.0% |
| ! | TATGAAGTTAGCATGAATAA+TGG | + | chr4.4:6758696-6758715 | None:intergenic | 25.0% |
| ! | TCAAACGAAAAATAGACAAA+AGG | + | chr4.4:6760258-6760277 | None:intergenic | 25.0% |
| ! | TCAATAATTCTTGCATCATT+CGG | - | chr4.4:6759674-6759693 | MS.gene030453:intron | 25.0% |
| ! | TCCAAATCTAGACAATTATT+GGG | + | chr4.4:6759337-6759356 | None:intergenic | 25.0% |
| ! | TCTACTAGTAAGATTTAGAT+GGG | + | chr4.4:6759066-6759085 | None:intergenic | 25.0% |
| ! | TGTTCCTCAATTTATAACTT+GGG | - | chr4.4:6761167-6761186 | MS.gene030453:CDS | 25.0% |
| ! | TTGTTCCTCAATTTATAACT+TGG | - | chr4.4:6761166-6761185 | MS.gene030453:CDS | 25.0% |
| !! | TCCATTATTTCCTTTTCAAT+GGG | - | chr4.4:6761232-6761251 | MS.gene030453:CDS | 25.0% |
| !! | TTTAAACTAACCTTGGTAAT+TGG | + | chr4.4:6759282-6759301 | None:intergenic | 25.0% |
| !! | TTTTAACAAGAAGGAAAAGA+AGG | - | chr4.4:6760309-6760328 | MS.gene030453:intron | 25.0% |
| !!! | AGTAGATTCTGAAATTAAAG+TGG | - | chr4.4:6759080-6759099 | MS.gene030453:intron | 25.0% |
| !!! | CATGTTTGTTGTTTTAGTAA+TGG | + | chr4.4:6759538-6759557 | None:intergenic | 25.0% |
| !!! | CATTGTTTCTATGTTGTTTA+AGG | + | chr4.4:6758157-6758176 | None:intergenic | 25.0% |
| !!! | GCCATTATATTTTAACAAGA+AGG | - | chr4.4:6760300-6760319 | MS.gene030453:intron | 25.0% |
| !!! | GTTTTGTTTTCGTTATGAAA+AGG | - | chr4.4:6760567-6760586 | MS.gene030453:intron | 25.0% |
| !!! | TTGAGATTCCTTTTTTGTTA+AGG | + | chr4.4:6758794-6758813 | None:intergenic | 25.0% |
| AAACAATGGATGGTTCAATT+AGG | - | chr4.4:6758169-6758188 | MS.gene030453:CDS | 30.0% | |
| AACAACATAGAAACAATGGA+TGG | - | chr4.4:6758159-6758178 | MS.gene030453:CDS | 30.0% | |
| AAGATGTTGTTCCAAGAAAA+AGG | + | chr4.4:6760797-6760816 | None:intergenic | 30.0% | |
| AATGAAGTTCACATACCTTA+TGG | + | chr4.4:6758449-6758468 | None:intergenic | 30.0% | |
| ACCCAATAATTGTCTAGATT+TGG | - | chr4.4:6759333-6759352 | MS.gene030453:intron | 30.0% | |
| AGAACCCAAGTTATAAATTG+AGG | + | chr4.4:6761174-6761193 | None:intergenic | 30.0% | |
| AGCACAATCCTTAACAAAAA+AGG | - | chr4.4:6758783-6758802 | MS.gene030453:intron | 30.0% | |
| ATAGTGCAGTAGTTATCTAT+AGG | - | chr4.4:6760108-6760127 | MS.gene030453:intron | 30.0% | |
| ATTATTATTCCCCTGAGAAT+GGG | + | chr4.4:6761204-6761223 | None:intergenic | 30.0% | |
| CTACTAGTAAGATTTAGATG+GGG | + | chr4.4:6759065-6759084 | None:intergenic | 30.0% | |
| CTCCAAATCTAGACAATTAT+TGG | + | chr4.4:6759338-6759357 | None:intergenic | 30.0% | |
| GTAAGTTTCCTTAATTGTGT+AGG | - | chr4.4:6759135-6759154 | MS.gene030453:intron | 30.0% | |
| TAAGATGTTTGTACCTATGT+GGG | + | chr4.4:6759380-6759399 | None:intergenic | 30.0% | |
| TAGCTAACATATTATCTGAG+TGG | - | chr4.4:6759310-6759329 | MS.gene030453:intron | 30.0% | |
| TATACATGTGAACTTGAGAA+TGG | + | chr4.4:6760672-6760691 | None:intergenic | 30.0% | |
| TCATAAACATGGCAAATAAG+TGG | + | chr4.4:6759504-6759523 | None:intergenic | 30.0% | |
| TCCCATTGAAAAGGAAATAA+TGG | + | chr4.4:6761236-6761255 | None:intergenic | 30.0% | |
| TCTACTGTATTACTACATGA+AGG | + | chr4.4:6760594-6760613 | None:intergenic | 30.0% | |
| TGGTGAAAATGATATTCTCT+AGG | - | chr4.4:6759100-6759119 | MS.gene030453:intron | 30.0% | |
| TTAAGATGTTTGTACCTATG+TGG | + | chr4.4:6759381-6759400 | None:intergenic | 30.0% | |
| TTGGTTATAAATTCTCAACG+AGG | - | chr4.4:6758948-6758967 | MS.gene030453:intron | 30.0% | |
| TTTGACTGTGTGTAGTTAAT+TGG | - | chr4.4:6759764-6759783 | MS.gene030453:intron | 30.0% | |
| TTTGGAGATTACAGAACAAA+AGG | - | chr4.4:6758195-6758214 | MS.gene030453:CDS | 30.0% | |
| ! | AATTTAGCCTTCATTAGAAG+AGG | - | chr4.4:6758756-6758775 | MS.gene030453:intron | 30.0% |
| ! | ATCTGATTCAATCCATTTTC+AGG | + | chr4.4:6761041-6761060 | None:intergenic | 30.0% |
| ! | CTCCATTATTTCCTTTTCAA+TGG | - | chr4.4:6761231-6761250 | MS.gene030453:CDS | 30.0% |
| ! | GATAAACAAGACCTTTTTCT+TGG | - | chr4.4:6760783-6760802 | MS.gene030453:intron | 30.0% |
| ! | GTATCTTTCTGAAAAAGGAT+TGG | + | chr4.4:6760943-6760962 | None:intergenic | 30.0% |
| !! | AGATGATGAAGATGTCATTT+TGG | + | chr4.4:6758310-6758329 | None:intergenic | 30.0% |
| !! | TGAAAATGGATTGAATCAGA+TGG | - | chr4.4:6761040-6761059 | MS.gene030453:CDS | 30.0% |
| !!! | TTTTCTGTTGATTTGAAGCT+TGG | - | chr4.4:6758222-6758241 | MS.gene030453:CDS | 30.0% |
| AACTTGAGAATGGTAGCAAT+TGG | + | chr4.4:6760662-6760681 | None:intergenic | 35.0% | |
| AAGATGTTTGTACCTATGTG+GGG | + | chr4.4:6759379-6759398 | None:intergenic | 35.0% | |
| AAGCTACTACTTCGAGTAAT+AGG | + | chr4.4:6759254-6759273 | None:intergenic | 35.0% | |
| AATGGCACATAGGAAACATT+TGG | + | chr4.4:6760286-6760305 | None:intergenic | 35.0% | |
| AATTACATAATGCACTTGGC+TGG | - | chr4.4:6759422-6759441 | MS.gene030453:intron | 35.0% | |
| ACACATGATCATCCTGAAAA+TGG | - | chr4.4:6761026-6761045 | MS.gene030453:CDS | 35.0% | |
| ACTTGAGAATGGTAGCAATT+GGG | + | chr4.4:6760661-6760680 | None:intergenic | 35.0% | |
| AGGAATTTGATGAAGGAAAG+AGG | - | chr4.4:6759171-6759190 | MS.gene030453:intron | 35.0% | |
| ATAGTTTCATGTCTTGTGGA+TGG | - | chr4.4:6758381-6758400 | MS.gene030453:CDS | 35.0% | |
| ATGACAAAGCATAACACACA+AGG | + | chr4.4:6758569-6758588 | None:intergenic | 35.0% | |
| CAAATAAGTGGACCAAATCA+AGG | + | chr4.4:6759492-6759511 | None:intergenic | 35.0% | |
| CATACACACATGTTGTAACT+TGG | - | chr4.4:6758929-6758948 | MS.gene030453:intron | 35.0% | |
| CATTATTATTCCCCTGAGAA+TGG | + | chr4.4:6761205-6761224 | None:intergenic | 35.0% | |
| CCACTAGATTGTCATAAACA+TGG | + | chr4.4:6759515-6759534 | None:intergenic | 35.0% | |
| CCATGTTTATGACAATCTAG+TGG | - | chr4.4:6759512-6759531 | MS.gene030453:intron | 35.0% | |
| CTTACAAAGTCCAAAGATGT+TGG | - | chr4.4:6758276-6758295 | MS.gene030453:CDS | 35.0% | |
| CTTCATCATCTTCAACTTCA+GGG | - | chr4.4:6758319-6758338 | MS.gene030453:CDS | 35.0% | |
| GTAACTGTAGAGACTATCAT+AGG | - | chr4.4:6758421-6758440 | MS.gene030453:CDS | 35.0% | |
| TCAGATAGTTTCATGTCTTG+TGG | - | chr4.4:6758377-6758396 | MS.gene030453:CDS | 35.0% | |
| TCTTCATCATCTTCAACTTC+AGG | - | chr4.4:6758318-6758337 | MS.gene030453:CDS | 35.0% | |
| TGACAAAGCATAACACACAA+GGG | + | chr4.4:6758568-6758587 | None:intergenic | 35.0% | |
| TTGCCCCCTTAAGTTATAAA+TGG | + | chr4.4:6760375-6760394 | None:intergenic | 35.0% | |
| ! | AGCTTTTTGTCCAATTACCA+AGG | - | chr4.4:6759269-6759288 | MS.gene030453:intron | 35.0% |
| ! | GAAATTCTAGCACTGAATCA+GGG | - | chr4.4:6758253-6758272 | MS.gene030453:CDS | 35.0% |
| ! | GTTATCTATAGGTTTTGCTC+TGG | - | chr4.4:6760119-6760138 | MS.gene030453:CDS | 35.0% |
| ! | TCATCTTTTATGCAACCCTT+AGG | - | chr4.4:6761074-6761093 | MS.gene030453:CDS | 35.0% |
| !! | ACTTTTCAGCTTTTGAGTGA+GGG | - | chr4.4:6759591-6759610 | MS.gene030453:intron | 35.0% |
| AAAAGAACCTGCTACATTGC+TGG | + | chr4.4:6758518-6758537 | None:intergenic | 40.0% | |
| ACAAAGTCCAAAGATGTTGG+TGG | - | chr4.4:6758279-6758298 | MS.gene030453:CDS | 40.0% | |
| AGAGCTAGAGCTATCAACAA+TGG | - | chr4.4:6758351-6758370 | MS.gene030453:CDS | 40.0% | |
| AGTTTGCATGACCATAGCTT+GGG | - | chr4.4:6761101-6761120 | MS.gene030453:CDS | 40.0% | |
| CAATGGATGGTTCAATTAGG+AGG | - | chr4.4:6758172-6758191 | MS.gene030453:CDS | 40.0% | |
| CAGTGCTAGAATTTCCAACA+TGG | + | chr4.4:6758248-6758267 | None:intergenic | 40.0% | |
| CTACTTCGAGTAATAGGTTC+TGG | + | chr4.4:6759248-6759267 | None:intergenic | 40.0% | |
| GACAAAGCATAACACACAAG+GGG | + | chr4.4:6758567-6758586 | None:intergenic | 40.0% | |
| GAGCTAGAGCTATCAACAAT+GGG | - | chr4.4:6758352-6758371 | MS.gene030453:CDS | 40.0% | |
| GATGGTTCAATTAGGAGGTT+TGG | - | chr4.4:6758177-6758196 | MS.gene030453:CDS | 40.0% | |
| GCATGGAACCTACACAATTA+AGG | + | chr4.4:6759146-6759165 | None:intergenic | 40.0% | |
| GCTTCTACCTCTTCTAATGA+AGG | + | chr4.4:6758766-6758785 | None:intergenic | 40.0% | |
| GGGGAAACACAAAAAGCTTA+TGG | + | chr4.4:6758548-6758567 | None:intergenic | 40.0% | |
| GGTAAATCCACCAACATCTT+TGG | + | chr4.4:6758289-6758308 | None:intergenic | 40.0% | |
| GGTTCATCATAGCAGTAGAA+GGG | + | chr4.4:6760695-6760714 | None:intergenic | 40.0% | |
| TAAGTGGACCAAATCAAGGA+TGG | + | chr4.4:6759488-6759507 | None:intergenic | 40.0% | |
| TCAGGATGATCATGTGTTTG+TGG | + | chr4.4:6761023-6761042 | None:intergenic | 40.0% | |
| TCATGCAAACTCAAGCCTAA+GGG | + | chr4.4:6761092-6761111 | None:intergenic | 40.0% | |
| TCTAGTGAATCCCATTCTCA+GGG | - | chr4.4:6761191-6761210 | MS.gene030453:CDS | 40.0% | |
| TGATCATGTGTTTGTGGTAC+TGG | + | chr4.4:6761017-6761036 | None:intergenic | 40.0% | |
| TGCTATGATGAACCCTACTT+GGG | - | chr4.4:6760701-6760720 | MS.gene030453:intron | 40.0% | |
| TTCTAGTGAATCCCATTCTC+AGG | - | chr4.4:6761190-6761209 | MS.gene030453:CDS | 40.0% | |
| TTGGGTTCAAATGATCAGAG+TGG | - | chr4.4:6761140-6761159 | MS.gene030453:CDS | 40.0% | |
| ! | CAATTGGTGGACATAAGCAA+AGG | - | chr4.4:6758487-6758506 | MS.gene030453:CDS | 40.0% |
| ! | GGAAATTCTAGCACTGAATC+AGG | - | chr4.4:6758252-6758271 | MS.gene030453:CDS | 40.0% |
| !! | CATCAAATTCCTCTAGAGCA+TGG | + | chr4.4:6759163-6759182 | None:intergenic | 40.0% |
| !! | GACTTTTCAGCTTTTGAGTG+AGG | - | chr4.4:6759590-6759609 | MS.gene030453:intron | 40.0% |
| !! | GCATTTGTTGGTGTTGATTG+TGG | + | chr4.4:6760752-6760771 | None:intergenic | 40.0% |
| !! | GCTCTAGAGGAATTTGATGA+AGG | - | chr4.4:6759164-6759183 | MS.gene030453:intron | 40.0% |
| !! | GGTCTTGTTTATCAACCAGA+TGG | + | chr4.4:6760776-6760795 | None:intergenic | 40.0% |
| AAGACTGCACAGGTCACAAT+TGG | - | chr4.4:6758471-6758490 | MS.gene030453:CDS | 45.0% | |
| AATTGTGACCTGTGCAGTCT+TGG | + | chr4.4:6758472-6758491 | None:intergenic | 45.0% | |
| ACACCAACAAATGCACCATC+TGG | - | chr4.4:6760758-6760777 | MS.gene030453:intron | 45.0% | |
| ACTAGATACGACACCTGGTT+TGG | + | chr4.4:6759901-6759920 | None:intergenic | 45.0% | |
| ACTTCATTCCAAGACTGCAC+AGG | - | chr4.4:6758461-6758480 | MS.gene030453:CDS | 45.0% | |
| AGACTATCATAGGCGCCATA+AGG | - | chr4.4:6758431-6758450 | MS.gene030453:CDS | 45.0% | |
| AGCTGTAGGAAACGCTTAGA+TGG | - | chr4.4:6759194-6759213 | MS.gene030453:intron | 45.0% | |
| ATGAAGGAAAGAGGAGCTGT+AGG | - | chr4.4:6759180-6759199 | MS.gene030453:intron | 45.0% | |
| ATGATGAACCCTACTTGGGT+TGG | - | chr4.4:6760705-6760724 | MS.gene030453:intron | 45.0% | |
| CAACCAGATGGTGCATTTGT+TGG | + | chr4.4:6760764-6760783 | None:intergenic | 45.0% | |
| CAACCAGCAGCTACAAAGAA+GGG | - | chr4.4:6760817-6760836 | MS.gene030453:intron | 45.0% | |
| CTAGTGAATCCCATTCTCAG+GGG | - | chr4.4:6761192-6761211 | MS.gene030453:CDS | 45.0% | |
| CTGCTATGATGAACCCTACT+TGG | - | chr4.4:6760700-6760719 | MS.gene030453:intron | 45.0% | |
| GAGTTTGCATGACCATAGCT+TGG | - | chr4.4:6761100-6761119 | MS.gene030453:CDS | 45.0% | |
| GGGTTCATCATAGCAGTAGA+AGG | + | chr4.4:6760696-6760715 | None:intergenic | 45.0% | |
| GTCATGCAAACTCAAGCCTA+AGG | + | chr4.4:6761093-6761112 | None:intergenic | 45.0% | |
| GTTTGCATGACCATAGCTTG+GGG | - | chr4.4:6761102-6761121 | MS.gene030453:CDS | 45.0% | |
| TAGACACTAGATACGACACC+TGG | + | chr4.4:6759906-6759925 | None:intergenic | 45.0% | |
| TCAACCAGCAGCTACAAAGA+AGG | - | chr4.4:6760816-6760835 | MS.gene030453:intron | 45.0% | |
| TGGACCAAATCAAGGATGGT+GGG | + | chr4.4:6759484-6759503 | None:intergenic | 45.0% | |
| TTTCCCTTCTTTGTAGCTGC+TGG | + | chr4.4:6760823-6760842 | None:intergenic | 45.0% | |
| ! | AAGAGGTTGGTTGTTCACAG+TGG | + | chr4.4:6760886-6760905 | None:intergenic | 45.0% |
| ! | CGAGTAATAGGTTCTGGTTG+TGG | + | chr4.4:6759242-6759261 | None:intergenic | 45.0% |
| ! | GATTTGAAGCTTGGCCATGT+TGG | - | chr4.4:6758231-6758250 | MS.gene030453:CDS | 45.0% |
| ! | GTTGTGGTTTTCTTCTCCGT+CGG | + | chr4.4:6759226-6759245 | None:intergenic | 45.0% |
| ! | TTTGGAGCAGACAATTGCTG+AGG | - | chr4.4:6759351-6759370 | MS.gene030453:intron | 45.0% |
| !! | GTTGGTGTTGATTGTGGCTA+TGG | + | chr4.4:6760746-6760765 | None:intergenic | 45.0% |
| ACATAATGCACTTGGCTGGC+TGG | - | chr4.4:6759426-6759445 | MS.gene030453:intron | 50.0% | |
| ACATCTCCTCCAACCCAAGT+AGG | + | chr4.4:6760717-6760736 | None:intergenic | 50.0% | |
| ACTGCACAGGTCACAATTGG+TGG | - | chr4.4:6758474-6758493 | MS.gene030453:CDS | 50.0% | |
| ATTGCTGAGGATCCCCACAT+AGG | - | chr4.4:6759364-6759383 | MS.gene030453:intron | 50.0% | |
| CATCTCCTCCAACCCAAGTA+GGG | + | chr4.4:6760716-6760735 | None:intergenic | 50.0% | |
| CTCATGGATGAAGCTGGAAG+AGG | + | chr4.4:6760903-6760922 | None:intergenic | 50.0% | |
| GCTTAGATGGTCACAACCGA+CGG | - | chr4.4:6759207-6759226 | MS.gene030453:intron | 50.0% | |
| GTGGACCAAATCAAGGATGG+TGG | + | chr4.4:6759485-6759504 | None:intergenic | 50.0% | |
| GTGTAGGTTCCATGCTCTAG+AGG | - | chr4.4:6759151-6759170 | MS.gene030453:intron | 50.0% | |
| TGGATGAAGCTGGAAGAGGT+TGG | + | chr4.4:6760899-6760918 | None:intergenic | 50.0% | |
| ! | GGGTCTGTGGACTCAGTTTT+GGG | - | chr4.4:6761122-6761141 | MS.gene030453:CDS | 50.0% |
| !! | ATGAACCCTACTTGGGTTGG+AGG | - | chr4.4:6760708-6760727 | MS.gene030453:intron | 50.0% |
| !! | CTTGGGTTGGAGGAGATGTT+AGG | - | chr4.4:6760718-6760737 | MS.gene030453:intron | 50.0% |
| AGTCCACAGACCCCAAGCTA+TGG | + | chr4.4:6761115-6761134 | None:intergenic | 55.0% | |
| CCATGAGTCGCACGTTTAGC+AGG | - | chr4.4:6760916-6760935 | MS.gene030453:CDS | 55.0% | |
| CCTGCTAAACGTGCGACTCA+TGG | + | chr4.4:6760919-6760938 | None:intergenic | 55.0% | |
| GCTGCCCACCATCCTTGATT+TGG | - | chr4.4:6759477-6759496 | MS.gene030453:intron | 55.0% | |
| GGTTCTGCCAGCAATGTAGC+AGG | - | chr4.4:6758508-6758527 | MS.gene030453:CDS | 55.0% | |
| GTGCGACTCATGGATGAAGC+TGG | + | chr4.4:6760909-6760928 | None:intergenic | 55.0% | |
| TGACCATAGCTTGGGGTCTG+TGG | - | chr4.4:6761109-6761128 | MS.gene030453:CDS | 55.0% | |
| TTCACAGTGGCTGCTGCTGT+TGG | + | chr4.4:6760873-6760892 | None:intergenic | 55.0% | |
| ! | GGGGTCTGTGGACTCAGTTT+TGG | - | chr4.4:6761121-6761140 | MS.gene030453:CDS | 55.0% |
| !! | ATCAAGGATGGTGGGCAGCA+TGG | + | chr4.4:6759476-6759495 | None:intergenic | 55.0% |
| ! | AATGCACTTGGCTGGCTGGC+TGG | - | chr4.4:6759430-6759449 | MS.gene030453:intron | 60.0% |
| CAGTGGCTGCTGCTGTTGGC+TGG | + | chr4.4:6760869-6760888 | None:intergenic | 65.0% | |
| GGTGGGCAGCATGGTGAGTG+AGG | + | chr4.4:6759467-6759486 | None:intergenic | 65.0% | |
| ! | CACTTGGCTGGCTGGCTGGC+TGG | - | chr4.4:6759434-6759453 | MS.gene030453:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 6758141 | 6761259 | 6758141 | ID=MS.gene030453 |
| chr4.4 | mRNA | 6758141 | 6761259 | 6758141 | ID=MS.gene030453.t1;Parent=MS.gene030453 |
| chr4.4 | exon | 6760871 | 6761259 | 6760871 | ID=MS.gene030453.t1.exon1;Parent=MS.gene030453.t1 |
| chr4.4 | CDS | 6760871 | 6761259 | 6760871 | ID=cds.MS.gene030453.t1;Parent=MS.gene030453.t1 |
| chr4.4 | exon | 6760110 | 6760243 | 6760110 | ID=MS.gene030453.t1.exon2;Parent=MS.gene030453.t1 |
| chr4.4 | CDS | 6760110 | 6760243 | 6760110 | ID=cds.MS.gene030453.t1;Parent=MS.gene030453.t1 |
| chr4.4 | exon | 6758141 | 6758745 | 6758141 | ID=MS.gene030453.t1.exon3;Parent=MS.gene030453.t1 |
| chr4.4 | CDS | 6758141 | 6758745 | 6758141 | ID=cds.MS.gene030453.t1;Parent=MS.gene030453.t1 |
| Gene Sequence |
| Protein sequence |
