Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030578.t1 | RHN43155.1 | 92.2 | 293 | 9 | 5 | 1 | 287 | 1 | 285 | 1.30E-153 | 552.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030578.t1 | Q9C598 | 62.6 | 286 | 82 | 6 | 1 | 280 | 1 | 267 | 9.0e-92 | 338.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030578.t1 | A0A396GWF7 | 92.2 | 293 | 9 | 5 | 1 | 287 | 1 | 285 | 9.1e-154 | 552.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene030578.t1 | TF | NAC |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030578.t1 | MTR_8g094580 | 91.809 | 293 | 10 | 5 | 1 | 287 | 1 | 285 | 0.0 | 538 |
| MS.gene030578.t1 | MTR_8g094580 | 89.958 | 239 | 10 | 5 | 55 | 287 | 1 | 231 | 8.98e-152 | 424 |
| MS.gene030578.t1 | MTR_3g096920 | 69.024 | 297 | 69 | 7 | 1 | 284 | 1 | 287 | 3.24e-134 | 382 |
| MS.gene030578.t1 | MTR_3g096920 | 61.261 | 333 | 71 | 7 | 1 | 284 | 1 | 324 | 3.85e-128 | 367 |
| MS.gene030578.t1 | MTR_3g088110 | 63.087 | 298 | 87 | 7 | 1 | 287 | 1 | 286 | 5.58e-120 | 345 |
| MS.gene030578.t1 | MTR_2157s0010 | 66.258 | 163 | 46 | 3 | 7 | 160 | 8 | 170 | 1.83e-75 | 231 |
| MS.gene030578.t1 | MTR_2g079990 | 67.702 | 161 | 47 | 2 | 5 | 164 | 14 | 170 | 3.25e-75 | 234 |
| MS.gene030578.t1 | MTR_2g080010 | 67.683 | 164 | 39 | 3 | 7 | 158 | 15 | 176 | 4.59e-75 | 233 |
| MS.gene030578.t1 | MTR_7g085220 | 54.589 | 207 | 78 | 3 | 7 | 198 | 8 | 213 | 1.22e-73 | 229 |
| MS.gene030578.t1 | MTR_8g059170 | 68.944 | 161 | 47 | 2 | 5 | 164 | 12 | 170 | 6.33e-73 | 227 |
| MS.gene030578.t1 | MTR_5g041940 | 64.103 | 156 | 55 | 1 | 5 | 159 | 1 | 156 | 2.20e-72 | 223 |
| MS.gene030578.t1 | MTR_4g081870 | 62.658 | 158 | 58 | 1 | 3 | 159 | 5 | 162 | 1.65e-71 | 221 |
| MS.gene030578.t1 | MTR_4g089135 | 64.000 | 175 | 41 | 3 | 6 | 158 | 14 | 188 | 2.09e-71 | 224 |
| MS.gene030578.t1 | MTR_2g093810 | 54.545 | 187 | 72 | 2 | 7 | 190 | 14 | 190 | 5.23e-70 | 219 |
| MS.gene030578.t1 | MTR_2g079990 | 58.378 | 185 | 52 | 2 | 5 | 164 | 14 | 198 | 7.08e-70 | 221 |
| MS.gene030578.t1 | MTR_7g100990 | 55.738 | 183 | 77 | 2 | 5 | 183 | 9 | 191 | 1.30e-69 | 218 |
| MS.gene030578.t1 | MTR_2g064090 | 38.170 | 317 | 155 | 9 | 5 | 284 | 4 | 316 | 1.24e-58 | 191 |
| MS.gene030578.t1 | MTR_5g040420 | 40.084 | 237 | 121 | 6 | 7 | 225 | 14 | 247 | 3.37e-56 | 186 |
| MS.gene030578.t1 | MTR_8g467490 | 43.363 | 226 | 105 | 7 | 9 | 221 | 16 | 231 | 8.89e-56 | 185 |
| MS.gene030578.t1 | MTR_6g011860 | 50.292 | 171 | 66 | 3 | 6 | 163 | 14 | 178 | 1.28e-54 | 182 |
| MS.gene030578.t1 | MTR_6g012670 | 47.716 | 197 | 87 | 4 | 5 | 188 | 18 | 211 | 3.76e-54 | 179 |
| MS.gene030578.t1 | MTR_3g070030 | 50.877 | 171 | 82 | 2 | 5 | 174 | 17 | 186 | 1.05e-53 | 178 |
| MS.gene030578.t1 | MTR_6g084430 | 52.121 | 165 | 68 | 3 | 7 | 168 | 5 | 161 | 1.07e-53 | 177 |
| MS.gene030578.t1 | MTR_6g477900 | 53.503 | 157 | 66 | 4 | 7 | 160 | 6 | 158 | 1.37e-53 | 174 |
| MS.gene030578.t1 | MTR_4g108760 | 53.659 | 164 | 67 | 3 | 5 | 164 | 15 | 173 | 1.44e-53 | 178 |
| MS.gene030578.t1 | MTR_3g109340 | 52.469 | 162 | 68 | 2 | 7 | 165 | 22 | 177 | 1.71e-52 | 175 |
| MS.gene030578.t1 | MTR_3g109340 | 52.469 | 162 | 69 | 3 | 7 | 165 | 22 | 178 | 2.80e-52 | 175 |
| MS.gene030578.t1 | MTR_4g036030 | 46.703 | 182 | 85 | 4 | 1 | 176 | 1 | 176 | 3.77e-52 | 174 |
| MS.gene030578.t1 | MTR_8g076110 | 50.311 | 161 | 70 | 3 | 7 | 163 | 6 | 160 | 3.92e-52 | 173 |
| MS.gene030578.t1 | MTR_5g090970 | 51.205 | 166 | 72 | 3 | 9 | 165 | 20 | 185 | 8.30e-52 | 172 |
| MS.gene030578.t1 | MTR_3g435150 | 54.194 | 155 | 68 | 2 | 5 | 158 | 14 | 166 | 9.56e-52 | 172 |
| MS.gene030578.t1 | MTR_5g076850 | 54.037 | 161 | 67 | 4 | 5 | 162 | 4 | 160 | 1.30e-51 | 179 |
| MS.gene030578.t1 | MTR_7g085260 | 51.205 | 166 | 74 | 2 | 4 | 164 | 14 | 177 | 1.50e-51 | 174 |
| MS.gene030578.t1 | MTR_3g064580 | 54.658 | 161 | 67 | 3 | 5 | 162 | 4 | 161 | 1.52e-51 | 179 |
| MS.gene030578.t1 | MTR_1g008740 | 50.289 | 173 | 73 | 5 | 1 | 165 | 17 | 184 | 2.81e-51 | 172 |
| MS.gene030578.t1 | MTR_1g008740 | 51.534 | 163 | 70 | 4 | 7 | 165 | 13 | 170 | 2.92e-51 | 172 |
| MS.gene030578.t1 | MTR_4g134460 | 53.247 | 154 | 64 | 2 | 9 | 160 | 56 | 203 | 3.18e-51 | 174 |
| MS.gene030578.t1 | MTR_5g012080 | 45.405 | 185 | 90 | 4 | 1 | 179 | 1 | 180 | 5.45e-51 | 171 |
| MS.gene030578.t1 | MTR_2g078700 | 54.140 | 157 | 63 | 3 | 7 | 158 | 23 | 175 | 6.67e-51 | 172 |
| MS.gene030578.t1 | MTR_5g014300 | 49.153 | 177 | 70 | 4 | 3 | 169 | 2 | 168 | 8.56e-51 | 170 |
| MS.gene030578.t1 | MTR_7g011120 | 49.133 | 173 | 78 | 4 | 5 | 169 | 6 | 176 | 1.02e-50 | 169 |
| MS.gene030578.t1 | MTR_4g101680 | 47.674 | 172 | 79 | 4 | 1 | 167 | 1 | 166 | 1.40e-50 | 171 |
| MS.gene030578.t1 | MTR_2g062730 | 48.837 | 172 | 75 | 4 | 1 | 165 | 2 | 167 | 2.36e-50 | 169 |
| MS.gene030578.t1 | MTR_7g005280 | 55.280 | 161 | 58 | 5 | 3 | 159 | 11 | 161 | 2.49e-50 | 167 |
| MS.gene030578.t1 | MTR_5g090970 | 51.205 | 166 | 71 | 4 | 9 | 165 | 20 | 184 | 4.44e-50 | 167 |
| MS.gene030578.t1 | MTR_5g021710 | 51.592 | 157 | 66 | 3 | 7 | 159 | 8 | 158 | 5.62e-50 | 169 |
| MS.gene030578.t1 | MTR_7g011130 | 48.045 | 179 | 77 | 4 | 5 | 169 | 17 | 193 | 6.00e-50 | 169 |
| MS.gene030578.t1 | MTR_2g068880 | 42.922 | 219 | 107 | 7 | 9 | 213 | 24 | 238 | 9.19e-50 | 167 |
| MS.gene030578.t1 | MTR_1g069805 | 46.739 | 184 | 84 | 4 | 7 | 185 | 10 | 184 | 1.16e-49 | 166 |
| MS.gene030578.t1 | MTR_4g035590 | 50.318 | 157 | 67 | 3 | 7 | 159 | 8 | 157 | 1.38e-48 | 165 |
| MS.gene030578.t1 | MTR_2g068920 | 41.629 | 221 | 109 | 6 | 9 | 214 | 23 | 238 | 5.29e-48 | 162 |
| MS.gene030578.t1 | MTR_6g032770 | 51.592 | 157 | 71 | 2 | 5 | 158 | 16 | 170 | 5.41e-48 | 164 |
| MS.gene030578.t1 | MTR_1g096430 | 48.718 | 156 | 70 | 3 | 7 | 158 | 7 | 156 | 1.72e-47 | 162 |
| MS.gene030578.t1 | MTR_7g097090 | 46.703 | 182 | 84 | 3 | 7 | 185 | 10 | 181 | 2.66e-47 | 160 |
| MS.gene030578.t1 | MTR_2g064470 | 42.925 | 212 | 102 | 6 | 6 | 212 | 10 | 207 | 7.14e-47 | 159 |
| MS.gene030578.t1 | MTR_4g098630 | 49.412 | 170 | 75 | 5 | 1 | 164 | 1 | 165 | 2.19e-46 | 158 |
| MS.gene030578.t1 | MTR_8g099750 | 45.977 | 174 | 88 | 3 | 2 | 171 | 9 | 180 | 4.16e-46 | 155 |
| MS.gene030578.t1 | MTR_8g024480 | 44.186 | 172 | 87 | 3 | 1 | 163 | 9 | 180 | 1.46e-45 | 159 |
| MS.gene030578.t1 | MTR_3g116070 | 57.364 | 129 | 51 | 2 | 7 | 131 | 23 | 151 | 8.00e-45 | 155 |
| MS.gene030578.t1 | MTR_5g069030 | 51.572 | 159 | 66 | 4 | 6 | 159 | 24 | 176 | 8.46e-45 | 160 |
| MS.gene030578.t1 | MTR_3g096140 | 45.860 | 157 | 78 | 3 | 7 | 160 | 7 | 159 | 3.67e-44 | 151 |
| MS.gene030578.t1 | MTR_3g098810 | 48.780 | 164 | 75 | 3 | 3 | 159 | 10 | 171 | 8.05e-44 | 149 |
| MS.gene030578.t1 | MTR_3g096140 | 45.860 | 157 | 78 | 3 | 7 | 160 | 7 | 159 | 2.30e-43 | 151 |
| MS.gene030578.t1 | MTR_3g093050 | 49.682 | 157 | 68 | 4 | 7 | 158 | 22 | 172 | 1.60e-42 | 154 |
| MS.gene030578.t1 | MTR_3g093050 | 49.682 | 157 | 68 | 4 | 7 | 158 | 22 | 172 | 2.26e-42 | 154 |
| MS.gene030578.t1 | MTR_1g097300 | 47.097 | 155 | 75 | 4 | 9 | 160 | 21 | 171 | 1.11e-41 | 151 |
| MS.gene030578.t1 | MTR_1g090723 | 44.186 | 172 | 88 | 5 | 9 | 176 | 10 | 177 | 2.84e-41 | 150 |
| MS.gene030578.t1 | MTR_0036s0150 | 44.624 | 186 | 93 | 6 | 4 | 185 | 2 | 181 | 5.84e-41 | 149 |
| MS.gene030578.t1 | MTR_3g093040 | 45.283 | 159 | 76 | 4 | 5 | 158 | 106 | 258 | 8.31e-41 | 144 |
| MS.gene030578.t1 | MTR_8g063550 | 43.038 | 158 | 83 | 3 | 6 | 160 | 5 | 158 | 1.20e-40 | 144 |
| MS.gene030578.t1 | MTR_1g090723 | 44.186 | 172 | 87 | 5 | 9 | 176 | 10 | 176 | 1.21e-40 | 148 |
| MS.gene030578.t1 | MTR_1g090723 | 44.186 | 172 | 87 | 5 | 9 | 176 | 10 | 176 | 1.50e-40 | 149 |
| MS.gene030578.t1 | MTR_8g063550 | 43.038 | 158 | 83 | 3 | 6 | 160 | 5 | 158 | 2.08e-40 | 145 |
| MS.gene030578.t1 | MTR_8g063550 | 43.038 | 158 | 83 | 3 | 6 | 160 | 5 | 158 | 2.91e-40 | 145 |
| MS.gene030578.t1 | MTR_3g070040 | 44.242 | 165 | 88 | 2 | 11 | 174 | 12 | 173 | 9.29e-40 | 141 |
| MS.gene030578.t1 | MTR_4g075980 | 44.654 | 159 | 75 | 4 | 9 | 163 | 17 | 166 | 1.16e-39 | 140 |
| MS.gene030578.t1 | MTR_3g098810 | 48.387 | 155 | 73 | 2 | 3 | 152 | 10 | 162 | 1.99e-39 | 136 |
| MS.gene030578.t1 | MTR_1g090720 | 44.199 | 181 | 89 | 4 | 7 | 182 | 42 | 215 | 2.23e-39 | 144 |
| MS.gene030578.t1 | MTR_2g086880 | 45.161 | 155 | 72 | 4 | 3 | 155 | 14 | 157 | 3.47e-39 | 144 |
| MS.gene030578.t1 | MTR_2g086880 | 45.161 | 155 | 72 | 4 | 3 | 155 | 14 | 157 | 4.45e-39 | 143 |
| MS.gene030578.t1 | MTR_8g023840 | 47.436 | 156 | 66 | 6 | 6 | 155 | 10 | 155 | 1.13e-37 | 137 |
| MS.gene030578.t1 | MTR_8g093580 | 41.139 | 158 | 86 | 3 | 6 | 160 | 5 | 158 | 2.49e-37 | 138 |
| MS.gene030578.t1 | MTR_4g052620 | 40.936 | 171 | 92 | 5 | 7 | 170 | 5 | 173 | 4.51e-36 | 130 |
| MS.gene030578.t1 | MTR_7g105170 | 32.035 | 231 | 136 | 7 | 7 | 225 | 4 | 225 | 8.15e-36 | 129 |
| MS.gene030578.t1 | MTR_4g094302 | 41.401 | 157 | 79 | 3 | 7 | 158 | 11 | 159 | 3.30e-34 | 123 |
| MS.gene030578.t1 | MTR_3g096140 | 42.553 | 141 | 74 | 3 | 23 | 160 | 2 | 138 | 3.38e-34 | 127 |
| MS.gene030578.t1 | MTR_2g086690 | 34.694 | 245 | 136 | 8 | 8 | 236 | 5 | 241 | 8.27e-34 | 124 |
| MS.gene030578.t1 | MTR_4g094302 | 46.094 | 128 | 58 | 2 | 7 | 131 | 11 | 130 | 7.11e-32 | 116 |
| MS.gene030578.t1 | MTR_8g023860 | 40.252 | 159 | 71 | 6 | 7 | 155 | 12 | 156 | 9.50e-32 | 122 |
| MS.gene030578.t1 | MTR_8g023930 | 40.000 | 165 | 75 | 6 | 7 | 161 | 24 | 174 | 1.68e-30 | 119 |
| MS.gene030578.t1 | MTR_8g093790 | 42.073 | 164 | 70 | 6 | 2 | 164 | 5 | 144 | 2.15e-30 | 113 |
| MS.gene030578.t1 | MTR_8g023900 | 40.881 | 159 | 70 | 6 | 10 | 158 | 196 | 340 | 3.83e-30 | 118 |
| MS.gene030578.t1 | MTR_8g023900 | 39.412 | 170 | 86 | 7 | 7 | 168 | 12 | 172 | 1.51e-29 | 116 |
| MS.gene030578.t1 | MTR_8g023880 | 35.955 | 178 | 80 | 8 | 1 | 158 | 1 | 164 | 1.18e-23 | 97.4 |
| MS.gene030578.t1 | MTR_3g096400 | 32.727 | 165 | 96 | 5 | 1 | 156 | 1 | 159 | 4.99e-23 | 94.4 |
| MS.gene030578.t1 | MTR_7g070140 | 54.667 | 75 | 31 | 1 | 60 | 131 | 17 | 91 | 3.82e-21 | 87.4 |
| MS.gene030578.t1 | MTR_7g083330 | 31.387 | 137 | 87 | 4 | 2 | 134 | 13 | 146 | 9.58e-18 | 79.7 |
| MS.gene030578.t1 | MTR_7g083360 | 31.343 | 134 | 85 | 4 | 5 | 134 | 8 | 138 | 1.46e-17 | 78.2 |
| MS.gene030578.t1 | MTR_7g083370 | 29.771 | 131 | 85 | 4 | 6 | 132 | 9 | 136 | 1.12e-15 | 72.8 |
| MS.gene030578.t1 | MTR_7g070150 | 44.928 | 69 | 30 | 3 | 101 | 168 | 7 | 68 | 1.35e-11 | 60.1 |
| MS.gene030578.t1 | MTR_7g116460 | 32.515 | 163 | 91 | 8 | 13 | 165 | 11 | 164 | 1.44e-11 | 62.8 |
| MS.gene030578.t1 | MTR_8g102240 | 32.468 | 154 | 75 | 7 | 5 | 132 | 45 | 195 | 6.56e-11 | 62.8 |
| MS.gene030578.t1 | MTR_8g102240 | 32.468 | 154 | 75 | 7 | 5 | 132 | 45 | 195 | 6.56e-11 | 62.8 |
| MS.gene030578.t1 | MTR_4g088245 | 29.861 | 144 | 83 | 5 | 7 | 133 | 68 | 210 | 8.51e-11 | 62.0 |
| MS.gene030578.t1 | MTR_4g078875 | 30.345 | 145 | 82 | 5 | 7 | 133 | 48 | 191 | 8.81e-11 | 61.6 |
| MS.gene030578.t1 | MTR_8g069160 | 29.861 | 144 | 83 | 5 | 7 | 133 | 68 | 210 | 9.91e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030578.t1 | AT1G01720 | 62.759 | 290 | 102 | 5 | 1 | 287 | 1 | 287 | 8.58e-120 | 345 |
| MS.gene030578.t1 | AT5G08790 | 63.542 | 288 | 76 | 8 | 1 | 280 | 1 | 267 | 1.16e-116 | 337 |
| MS.gene030578.t1 | AT5G63790 | 60.473 | 296 | 70 | 9 | 1 | 286 | 44 | 302 | 1.70e-109 | 320 |
| MS.gene030578.t1 | AT5G63790 | 60.959 | 292 | 67 | 9 | 1 | 282 | 54 | 308 | 1.93e-109 | 320 |
| MS.gene030578.t1 | AT1G77450 | 60.153 | 261 | 59 | 7 | 5 | 262 | 8 | 226 | 3.66e-96 | 283 |
| MS.gene030578.t1 | AT1G69490 | 54.369 | 206 | 88 | 3 | 7 | 211 | 9 | 209 | 8.12e-76 | 232 |
| MS.gene030578.t1 | AT1G52890 | 67.702 | 161 | 47 | 2 | 5 | 164 | 12 | 168 | 2.16e-74 | 230 |
| MS.gene030578.t1 | AT3G15500 | 66.867 | 166 | 48 | 3 | 5 | 167 | 12 | 173 | 6.25e-74 | 229 |
| MS.gene030578.t1 | AT4G27410 | 69.677 | 155 | 42 | 2 | 5 | 158 | 12 | 162 | 1.44e-73 | 228 |
| MS.gene030578.t1 | AT1G61110 | 65.663 | 166 | 47 | 2 | 3 | 158 | 12 | 177 | 1.20e-71 | 224 |
| MS.gene030578.t1 | AT3G04070 | 64.596 | 161 | 48 | 2 | 7 | 158 | 10 | 170 | 7.88e-70 | 219 |
| MS.gene030578.t1 | AT3G04070 | 61.582 | 177 | 43 | 4 | 7 | 158 | 10 | 186 | 1.61e-69 | 219 |
| MS.gene030578.t1 | AT4G27410 | 62.791 | 172 | 42 | 3 | 5 | 158 | 12 | 179 | 5.28e-69 | 216 |
| MS.gene030578.t1 | AT3G15510 | 65.839 | 161 | 39 | 4 | 11 | 158 | 21 | 178 | 5.37e-67 | 213 |
| MS.gene030578.t1 | AT1G52880 | 65.409 | 159 | 42 | 3 | 11 | 158 | 21 | 177 | 1.51e-62 | 200 |
| MS.gene030578.t1 | AT5G61430 | 55.414 | 157 | 67 | 2 | 5 | 160 | 14 | 168 | 2.19e-56 | 185 |
| MS.gene030578.t1 | AT5G39610 | 53.254 | 169 | 71 | 3 | 5 | 172 | 18 | 179 | 1.05e-55 | 181 |
| MS.gene030578.t1 | AT5G07680 | 56.129 | 155 | 65 | 2 | 5 | 158 | 15 | 167 | 1.12e-55 | 183 |
| MS.gene030578.t1 | AT5G07680 | 56.129 | 155 | 65 | 2 | 5 | 158 | 1 | 153 | 1.28e-55 | 182 |
| MS.gene030578.t1 | AT3G18400 | 54.375 | 160 | 65 | 3 | 7 | 164 | 5 | 158 | 2.48e-55 | 181 |
| MS.gene030578.t1 | AT1G26870 | 51.807 | 166 | 60 | 3 | 7 | 158 | 16 | 175 | 2.93e-55 | 184 |
| MS.gene030578.t1 | AT5G39820 | 48.000 | 175 | 71 | 3 | 9 | 163 | 22 | 196 | 1.21e-54 | 180 |
| MS.gene030578.t1 | AT3G29035 | 48.223 | 197 | 89 | 4 | 5 | 198 | 22 | 208 | 1.61e-54 | 179 |
| MS.gene030578.t1 | AT1G76420 | 54.777 | 157 | 63 | 4 | 7 | 160 | 22 | 173 | 2.18e-54 | 179 |
| MS.gene030578.t1 | AT2G33480 | 54.717 | 159 | 62 | 3 | 2 | 159 | 10 | 159 | 8.71e-54 | 176 |
| MS.gene030578.t1 | AT3G04060 | 51.445 | 173 | 74 | 3 | 2 | 169 | 15 | 182 | 9.86e-54 | 178 |
| MS.gene030578.t1 | AT2G33480 | 55.346 | 159 | 63 | 4 | 2 | 159 | 10 | 161 | 1.82e-53 | 175 |
| MS.gene030578.t1 | AT5G62380 | 46.486 | 185 | 89 | 3 | 1 | 181 | 1 | 179 | 2.13e-53 | 177 |
| MS.gene030578.t1 | AT5G62380 | 46.486 | 185 | 89 | 3 | 1 | 181 | 1 | 179 | 2.13e-53 | 177 |
| MS.gene030578.t1 | AT2G24430 | 52.469 | 162 | 69 | 3 | 7 | 165 | 16 | 172 | 4.53e-53 | 176 |
| MS.gene030578.t1 | AT2G24430 | 52.469 | 162 | 69 | 3 | 7 | 165 | 16 | 172 | 4.53e-53 | 176 |
| MS.gene030578.t1 | AT3G17730 | 52.866 | 157 | 67 | 3 | 7 | 160 | 6 | 158 | 4.55e-53 | 173 |
| MS.gene030578.t1 | AT3G03200 | 54.140 | 157 | 66 | 3 | 5 | 158 | 4 | 157 | 5.00e-53 | 180 |
| MS.gene030578.t1 | AT5G17260 | 54.140 | 157 | 66 | 3 | 5 | 158 | 4 | 157 | 8.52e-52 | 176 |
| MS.gene030578.t1 | AT2G43000 | 51.656 | 151 | 69 | 2 | 9 | 158 | 20 | 167 | 2.10e-51 | 170 |
| MS.gene030578.t1 | AT5G53950 | 53.416 | 161 | 58 | 3 | 7 | 158 | 17 | 169 | 2.33e-51 | 173 |
| MS.gene030578.t1 | AT2G02450 | 45.699 | 186 | 92 | 3 | 9 | 192 | 53 | 231 | 2.73e-51 | 173 |
| MS.gene030578.t1 | AT2G02450 | 45.699 | 186 | 92 | 3 | 9 | 192 | 53 | 231 | 4.21e-51 | 173 |
| MS.gene030578.t1 | AT3G15170 | 50.299 | 167 | 66 | 3 | 7 | 164 | 20 | 178 | 4.96e-51 | 170 |
| MS.gene030578.t1 | AT5G13180 | 55.000 | 160 | 61 | 3 | 3 | 159 | 10 | 161 | 7.77e-51 | 168 |
| MS.gene030578.t1 | AT1G12260 | 49.693 | 163 | 72 | 3 | 1 | 159 | 1 | 157 | 9.30e-51 | 170 |
| MS.gene030578.t1 | AT5G18270 | 52.469 | 162 | 61 | 3 | 5 | 158 | 19 | 172 | 1.76e-50 | 169 |
| MS.gene030578.t1 | AT1G62700 | 49.080 | 163 | 73 | 3 | 1 | 159 | 1 | 157 | 1.84e-50 | 171 |
| MS.gene030578.t1 | AT1G62700 | 49.080 | 163 | 73 | 3 | 1 | 159 | 1 | 157 | 1.84e-50 | 171 |
| MS.gene030578.t1 | AT5G18270 | 52.469 | 162 | 61 | 3 | 5 | 158 | 19 | 172 | 2.15e-50 | 169 |
| MS.gene030578.t1 | AT1G12260 | 49.693 | 163 | 72 | 3 | 1 | 159 | 1 | 157 | 2.33e-50 | 171 |
| MS.gene030578.t1 | AT4G36160 | 51.250 | 160 | 68 | 3 | 4 | 159 | 11 | 164 | 3.23e-50 | 170 |
| MS.gene030578.t1 | AT4G36160 | 51.250 | 160 | 68 | 3 | 4 | 159 | 7 | 160 | 3.35e-50 | 170 |
| MS.gene030578.t1 | AT4G36160 | 51.250 | 160 | 68 | 3 | 4 | 159 | 7 | 160 | 3.35e-50 | 170 |
| MS.gene030578.t1 | AT5G46590 | 51.875 | 160 | 70 | 4 | 3 | 158 | 2 | 158 | 3.74e-50 | 167 |
| MS.gene030578.t1 | AT2G18060 | 49.689 | 161 | 71 | 3 | 4 | 160 | 6 | 160 | 4.88e-50 | 169 |
| MS.gene030578.t1 | AT2G18060 | 49.689 | 161 | 71 | 3 | 4 | 160 | 6 | 160 | 4.88e-50 | 169 |
| MS.gene030578.t1 | AT1G79580 | 47.619 | 168 | 76 | 3 | 3 | 165 | 13 | 173 | 5.74e-50 | 169 |
| MS.gene030578.t1 | AT1G79580 | 47.619 | 168 | 76 | 3 | 3 | 165 | 13 | 173 | 5.74e-50 | 169 |
| MS.gene030578.t1 | AT1G79580 | 47.619 | 168 | 76 | 3 | 3 | 165 | 13 | 173 | 5.74e-50 | 169 |
| MS.gene030578.t1 | AT1G79580 | 47.619 | 168 | 76 | 3 | 3 | 165 | 13 | 173 | 5.74e-50 | 169 |
| MS.gene030578.t1 | AT1G79580 | 47.619 | 168 | 76 | 3 | 3 | 165 | 13 | 173 | 5.74e-50 | 169 |
| MS.gene030578.t1 | AT1G56010 | 49.432 | 176 | 82 | 4 | 6 | 177 | 18 | 190 | 5.75e-50 | 168 |
| MS.gene030578.t1 | AT4G10350 | 48.256 | 172 | 81 | 3 | 7 | 174 | 9 | 176 | 1.09e-49 | 167 |
| MS.gene030578.t1 | AT3G10490 | 46.703 | 182 | 84 | 4 | 4 | 182 | 24 | 195 | 1.24e-49 | 164 |
| MS.gene030578.t1 | AT4G17980 | 51.553 | 161 | 71 | 4 | 3 | 158 | 2 | 160 | 1.25e-49 | 165 |
| MS.gene030578.t1 | AT4G17980 | 51.553 | 161 | 71 | 4 | 3 | 158 | 2 | 160 | 1.51e-49 | 166 |
| MS.gene030578.t1 | AT1G54330 | 51.534 | 163 | 69 | 3 | 5 | 164 | 4 | 159 | 3.06e-49 | 165 |
| MS.gene030578.t1 | AT1G71930 | 49.359 | 156 | 69 | 3 | 7 | 158 | 9 | 158 | 3.35e-49 | 166 |
| MS.gene030578.t1 | AT1G71930 | 49.359 | 156 | 69 | 3 | 7 | 158 | 9 | 158 | 3.35e-49 | 166 |
| MS.gene030578.t1 | AT3G10480 | 46.448 | 183 | 85 | 4 | 3 | 182 | 23 | 195 | 1.19e-48 | 167 |
| MS.gene030578.t1 | AT1G65910 | 51.205 | 166 | 71 | 4 | 5 | 164 | 4 | 165 | 1.38e-48 | 171 |
| MS.gene030578.t1 | AT1G33280 | 48.193 | 166 | 75 | 3 | 7 | 168 | 8 | 166 | 1.44e-48 | 164 |
| MS.gene030578.t1 | AT3G12977 | 50.327 | 153 | 72 | 2 | 7 | 158 | 18 | 167 | 1.48e-48 | 163 |
| MS.gene030578.t1 | AT5G66300 | 49.080 | 163 | 74 | 3 | 4 | 162 | 9 | 166 | 1.64e-48 | 163 |
| MS.gene030578.t1 | AT5G46590 | 53.472 | 144 | 63 | 2 | 3 | 142 | 2 | 145 | 2.12e-48 | 162 |
| MS.gene030578.t1 | AT3G10480 | 46.995 | 183 | 83 | 5 | 3 | 182 | 23 | 194 | 3.36e-48 | 166 |
| MS.gene030578.t1 | AT3G61910 | 39.500 | 200 | 108 | 3 | 1 | 187 | 5 | 204 | 5.34e-48 | 163 |
| MS.gene030578.t1 | AT1G32510 | 46.073 | 191 | 89 | 4 | 1 | 181 | 1 | 187 | 9.48e-48 | 161 |
| MS.gene030578.t1 | AT3G10490 | 46.703 | 182 | 84 | 4 | 4 | 182 | 24 | 195 | 9.84e-48 | 165 |
| MS.gene030578.t1 | AT2G46770 | 44.767 | 172 | 82 | 3 | 1 | 159 | 10 | 181 | 2.90e-47 | 162 |
| MS.gene030578.t1 | AT1G33060 | 43.415 | 205 | 101 | 5 | 7 | 208 | 24 | 216 | 3.56e-46 | 164 |
| MS.gene030578.t1 | AT1G33060 | 43.415 | 205 | 101 | 5 | 7 | 208 | 24 | 216 | 3.57e-46 | 164 |
| MS.gene030578.t1 | AT5G24590 | 49.682 | 157 | 71 | 3 | 7 | 159 | 13 | 165 | 4.62e-46 | 161 |
| MS.gene030578.t1 | AT4G28530 | 46.821 | 173 | 63 | 4 | 6 | 158 | 9 | 172 | 6.99e-46 | 158 |
| MS.gene030578.t1 | AT4G35580 | 52.229 | 157 | 64 | 4 | 7 | 158 | 9 | 159 | 7.31e-46 | 162 |
| MS.gene030578.t1 | AT4G35580 | 52.229 | 157 | 64 | 4 | 7 | 158 | 9 | 159 | 8.40e-46 | 162 |
| MS.gene030578.t1 | AT1G32770 | 44.118 | 170 | 85 | 3 | 1 | 160 | 10 | 179 | 8.46e-46 | 158 |
| MS.gene030578.t1 | AT4G35580 | 52.229 | 157 | 64 | 4 | 7 | 158 | 9 | 159 | 1.22e-45 | 161 |
| MS.gene030578.t1 | AT3G10500 | 49.045 | 157 | 73 | 3 | 7 | 160 | 9 | 161 | 1.00e-44 | 159 |
| MS.gene030578.t1 | AT3G10480 | 40.741 | 216 | 82 | 5 | 3 | 182 | 23 | 228 | 1.01e-44 | 159 |
| MS.gene030578.t1 | AT3G49530 | 44.571 | 175 | 89 | 3 | 7 | 177 | 13 | 183 | 1.20e-44 | 156 |
| MS.gene030578.t1 | AT3G49530 | 44.571 | 175 | 89 | 3 | 7 | 177 | 13 | 183 | 3.33e-44 | 156 |
| MS.gene030578.t1 | AT3G12910 | 48.315 | 178 | 76 | 7 | 2 | 165 | 17 | 192 | 8.51e-44 | 151 |
| MS.gene030578.t1 | AT5G04410 | 47.771 | 157 | 75 | 3 | 7 | 160 | 9 | 161 | 3.30e-43 | 155 |
| MS.gene030578.t1 | AT1G34180 | 43.860 | 171 | 89 | 3 | 9 | 176 | 18 | 184 | 3.79e-43 | 153 |
| MS.gene030578.t1 | AT2G17040 | 43.548 | 186 | 78 | 6 | 9 | 177 | 8 | 183 | 1.14e-42 | 147 |
| MS.gene030578.t1 | AT1G34180 | 43.860 | 171 | 89 | 3 | 9 | 176 | 18 | 184 | 2.82e-42 | 152 |
| MS.gene030578.t1 | AT1G34190 | 43.275 | 171 | 90 | 3 | 9 | 176 | 18 | 184 | 6.97e-41 | 149 |
| MS.gene030578.t1 | AT1G34180 | 41.530 | 183 | 88 | 3 | 9 | 176 | 18 | 196 | 7.24e-41 | 147 |
| MS.gene030578.t1 | AT5G09330 | 44.720 | 161 | 82 | 4 | 3 | 160 | 2 | 158 | 1.31e-40 | 147 |
| MS.gene030578.t1 | AT5G09330 | 44.720 | 161 | 82 | 4 | 3 | 160 | 2 | 158 | 1.31e-40 | 147 |
| MS.gene030578.t1 | AT5G09330 | 44.720 | 161 | 82 | 4 | 3 | 160 | 2 | 158 | 1.31e-40 | 147 |
| MS.gene030578.t1 | AT5G09330 | 44.720 | 161 | 82 | 4 | 3 | 160 | 2 | 158 | 1.31e-40 | 147 |
| MS.gene030578.t1 | AT5G09330 | 44.720 | 161 | 82 | 4 | 3 | 160 | 2 | 158 | 1.31e-40 | 147 |
| MS.gene030578.t1 | AT3G44290 | 33.898 | 236 | 125 | 7 | 9 | 239 | 16 | 225 | 2.90e-40 | 140 |
| MS.gene030578.t1 | AT1G34180 | 41.530 | 183 | 88 | 3 | 9 | 176 | 18 | 196 | 4.07e-40 | 147 |
| MS.gene030578.t1 | AT2G27300 | 45.033 | 151 | 70 | 3 | 7 | 155 | 14 | 153 | 3.17e-39 | 140 |
| MS.gene030578.t1 | AT5G64060 | 40.678 | 177 | 98 | 4 | 3 | 176 | 2 | 174 | 5.48e-39 | 140 |
| MS.gene030578.t1 | AT3G44290 | 34.061 | 229 | 120 | 7 | 9 | 232 | 16 | 218 | 5.84e-39 | 139 |
| MS.gene030578.t1 | AT5G22290 | 42.857 | 154 | 74 | 4 | 9 | 159 | 23 | 165 | 7.61e-38 | 137 |
| MS.gene030578.t1 | AT1G32870 | 50.314 | 159 | 68 | 5 | 7 | 160 | 10 | 162 | 3.16e-37 | 138 |
| MS.gene030578.t1 | AT1G32870 | 50.314 | 159 | 68 | 5 | 7 | 160 | 10 | 162 | 3.30e-37 | 138 |
| MS.gene030578.t1 | AT1G32870 | 50.314 | 159 | 68 | 5 | 7 | 160 | 46 | 198 | 4.19e-37 | 139 |
| MS.gene030578.t1 | AT5G61430 | 57.009 | 107 | 43 | 2 | 55 | 160 | 1 | 105 | 9.44e-35 | 127 |
| MS.gene030578.t1 | AT1G56010 | 49.606 | 127 | 58 | 3 | 55 | 178 | 1 | 124 | 1.84e-33 | 123 |
| MS.gene030578.t1 | AT5G22380 | 34.538 | 249 | 126 | 11 | 4 | 237 | 2 | 228 | 3.52e-33 | 122 |
| MS.gene030578.t1 | AT3G44350 | 38.983 | 177 | 87 | 8 | 6 | 170 | 4 | 171 | 8.82e-33 | 120 |
| MS.gene030578.t1 | AT5G64530 | 39.205 | 176 | 82 | 4 | 5 | 167 | 1 | 164 | 1.27e-32 | 119 |
| MS.gene030578.t1 | AT2G33480 | 56.436 | 101 | 39 | 3 | 60 | 159 | 8 | 104 | 4.84e-32 | 118 |
| MS.gene030578.t1 | AT5G04395 | 40.816 | 147 | 70 | 3 | 6 | 135 | 27 | 173 | 1.91e-31 | 115 |
| MS.gene030578.t1 | AT3G44350 | 38.509 | 161 | 79 | 6 | 6 | 151 | 4 | 159 | 3.05e-31 | 114 |
| MS.gene030578.t1 | AT3G12977 | 50.926 | 108 | 49 | 2 | 52 | 158 | 10 | 114 | 3.38e-31 | 116 |
| MS.gene030578.t1 | AT4G10350 | 50.000 | 116 | 53 | 2 | 60 | 174 | 18 | 129 | 7.79e-31 | 117 |
| MS.gene030578.t1 | AT5G64530 | 45.385 | 130 | 56 | 3 | 5 | 131 | 1 | 118 | 4.83e-30 | 111 |
| MS.gene030578.t1 | AT4G28530 | 37.059 | 170 | 47 | 3 | 6 | 158 | 9 | 135 | 7.31e-29 | 112 |
| MS.gene030578.t1 | AT4G01520 | 32.836 | 201 | 113 | 6 | 8 | 195 | 5 | 196 | 7.63e-27 | 106 |
| MS.gene030578.t1 | AT4G01550 | 40.769 | 130 | 70 | 3 | 10 | 132 | 7 | 136 | 1.78e-26 | 108 |
| MS.gene030578.t1 | AT4G01540 | 33.166 | 199 | 111 | 6 | 10 | 195 | 7 | 196 | 1.06e-25 | 105 |
| MS.gene030578.t1 | AT4G01540 | 33.166 | 199 | 111 | 6 | 10 | 195 | 7 | 196 | 1.17e-25 | 105 |
| MS.gene030578.t1 | AT4G01540 | 33.166 | 199 | 111 | 6 | 10 | 195 | 7 | 196 | 1.62e-25 | 105 |
| MS.gene030578.t1 | AT4G01540 | 33.166 | 199 | 111 | 6 | 10 | 195 | 7 | 196 | 2.09e-25 | 105 |
| MS.gene030578.t1 | AT3G04420 | 40.769 | 130 | 72 | 3 | 5 | 129 | 1 | 130 | 1.04e-23 | 98.2 |
| MS.gene030578.t1 | AT3G04420 | 40.769 | 130 | 72 | 3 | 5 | 129 | 1 | 130 | 2.90e-23 | 97.8 |
| MS.gene030578.t1 | AT1G02230 | 36.296 | 135 | 75 | 4 | 8 | 134 | 4 | 135 | 1.72e-22 | 95.9 |
| MS.gene030578.t1 | AT2G43000 | 47.253 | 91 | 44 | 2 | 69 | 158 | 2 | 89 | 3.56e-22 | 91.7 |
| MS.gene030578.t1 | AT5G14000 | 36.000 | 150 | 91 | 3 | 1 | 147 | 9 | 156 | 1.61e-21 | 89.0 |
| MS.gene030578.t1 | AT5G14000 | 33.742 | 163 | 96 | 4 | 1 | 160 | 9 | 162 | 3.33e-21 | 89.4 |
| MS.gene030578.t1 | AT3G10490 | 45.192 | 104 | 46 | 3 | 80 | 182 | 2 | 95 | 2.05e-20 | 90.1 |
| MS.gene030578.t1 | AT3G10490 | 45.192 | 104 | 46 | 3 | 80 | 182 | 2 | 95 | 2.05e-20 | 90.1 |
| MS.gene030578.t1 | AT1G02220 | 33.333 | 165 | 93 | 5 | 5 | 164 | 1 | 153 | 2.93e-20 | 90.1 |
| MS.gene030578.t1 | AT3G56530 | 34.395 | 157 | 87 | 6 | 7 | 156 | 52 | 199 | 3.12e-20 | 89.0 |
| MS.gene030578.t1 | AT1G02250 | 38.462 | 130 | 69 | 4 | 8 | 129 | 4 | 130 | 1.15e-19 | 88.2 |
| MS.gene030578.t1 | AT1G01010 | 34.532 | 139 | 74 | 5 | 5 | 129 | 1 | 136 | 3.76e-17 | 81.3 |
| MS.gene030578.t1 | AT3G55210 | 31.953 | 169 | 90 | 7 | 4 | 156 | 8 | 167 | 4.54e-16 | 77.0 |
| MS.gene030578.t1 | AT2G18060 | 46.753 | 77 | 34 | 2 | 85 | 160 | 2 | 72 | 1.97e-15 | 75.1 |
| MS.gene030578.t1 | AT5G50820 | 33.577 | 137 | 74 | 6 | 4 | 133 | 14 | 140 | 9.68e-14 | 68.9 |
| MS.gene030578.t1 | AT5G22290 | 42.105 | 76 | 31 | 3 | 86 | 159 | 2 | 66 | 2.61e-11 | 62.8 |
| MS.gene030578.t1 | AT4G29230 | 33.117 | 154 | 73 | 8 | 7 | 133 | 48 | 198 | 2.69e-11 | 64.3 |
| MS.gene030578.t1 | AT4G29230 | 33.117 | 154 | 73 | 8 | 7 | 133 | 47 | 197 | 3.00e-11 | 63.9 |
| MS.gene030578.t1 | AT4G29230 | 33.117 | 154 | 73 | 8 | 7 | 133 | 48 | 198 | 4.88e-11 | 63.2 |
| MS.gene030578.t1 | AT3G04430 | 33.582 | 134 | 70 | 6 | 13 | 130 | 6 | 136 | 6.90e-11 | 60.8 |
Find 80 sgRNAs with CRISPR-Local
Find 94 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATCAATTTCTTTGATAAT+AGG | 0.219498 | 4.2:+8404880 | None:intergenic |
| TGAAAATCAAAGGCTGAAAC+TGG | 0.273975 | 4.2:+8404060 | None:intergenic |
| GGGCTGCGGGAACCGGATAT+TGG | 0.287906 | 4.2:-8404656 | MS.gene030578:CDS |
| TTGATAATAGGAACAGCTAT+AGG | 0.303758 | 4.2:+8404892 | None:intergenic |
| TTCTTTATCCCAAGTGCCTT+CGG | 0.348007 | 4.2:+8404600 | None:intergenic |
| TTTACAGAAATGGCTCTTTA+CGG | 0.351320 | 4.2:-8404744 | MS.gene030578:intron |
| TTTGATCCATGGCATCTTCC+AGG | 0.357407 | 4.2:-8404850 | MS.gene030578:intron |
| AATAACAAATTAAATTTACT+TGG | 0.360188 | 4.2:+8403936 | None:intergenic |
| AACCCGAAAATTGATTCATT+TGG | 0.363530 | 4.2:+8403983 | None:intergenic |
| AAGTGGAATGAATTTGTATT+GGG | 0.373773 | 4.2:-8404090 | MS.gene030578:CDS |
| ATTAATTGCAGCTTGATGAT+TGG | 0.388930 | 4.2:-8404365 | MS.gene030578:intron |
| CCGAACCGGGCTGCGGGAAC+CGG | 0.391909 | 4.2:-8404663 | MS.gene030578:CDS |
| CCAAAGGAATTAAAACCAAT+TGG | 0.402035 | 4.2:-8404548 | MS.gene030578:CDS |
| CGGTTCGGCCTTGAACCGTT+TGG | 0.403070 | 4.2:+8404678 | None:intergenic |
| CCGGTTCCCGCAGCCCGGTT+CGG | 0.410215 | 4.2:+8404663 | None:intergenic |
| TCAAAGGCTGAAACTGGGTC+TGG | 0.410879 | 4.2:+8404066 | None:intergenic |
| TTAATTGCAGCTTGATGATT+GGG | 0.412168 | 4.2:-8404364 | MS.gene030578:intron |
| CAAGTGGAATGAATTTGTAT+TGG | 0.415048 | 4.2:-8404091 | MS.gene030578:CDS |
| GTAAATATCCAAACGGTTCA+AGG | 0.423042 | 4.2:-8404686 | MS.gene030578:CDS |
| TGTCGAATTTACAACAAGAA+AGG | 0.430099 | 4.2:-8404336 | MS.gene030578:CDS |
| TACTGATCCTGAGGGGCAAA+AGG | 0.435530 | 4.2:+8404006 | None:intergenic |
| CAAATTAAATTTACTTGGGC+AGG | 0.439187 | 4.2:+8403941 | None:intergenic |
| CAAACGGTTCAAGGCCGAAC+CGG | 0.440323 | 4.2:-8404677 | MS.gene030578:CDS |
| TTCAAGGCCGAACCGGGCTG+CGG | 0.445265 | 4.2:-8404670 | MS.gene030578:CDS |
| CAATACAAATTCATTCCACT+TGG | 0.450741 | 4.2:+8404092 | None:intergenic |
| TGATAATAGGAACAGCTATA+GGG | 0.457703 | 4.2:+8404893 | None:intergenic |
| TTTGGATATTTACGATCCCT+TGG | 0.476106 | 4.2:+8404696 | None:intergenic |
| TCCGGTCGCCTTCCAATATC+CGG | 0.478603 | 4.2:+8404644 | None:intergenic |
| TCAAGGCCGAACCGGGCTGC+GGG | 0.480914 | 4.2:-8404669 | MS.gene030578:CDS |
| TCCAATCGGCTTATCAGCTC+CGG | 0.481369 | 4.2:+8404626 | None:intergenic |
| CGTGGTTTCACCGTGCGATA+AGG | 0.482787 | 4.2:-8404130 | MS.gene030578:CDS |
| CAGTTGAATCTTATGGATGA+TGG | 0.485236 | 4.2:-8404039 | MS.gene030578:CDS |
| ATACTCATGCATGATCCAAT+TGG | 0.485541 | 4.2:+8404533 | None:intergenic |
| CAAAGGCTGAAACTGGGTCT+GGG | 0.487541 | 4.2:+8404067 | None:intergenic |
| ATTGGAAAGCCGAAGGCACT+TGG | 0.488594 | 4.2:-8404609 | MS.gene030578:CDS |
| GTCGAATTTACAACAAGAAA+GGG | 0.491222 | 4.2:-8404335 | MS.gene030578:CDS |
| TTCATTTGGTACTGATCCTG+AGG | 0.513979 | 4.2:+8403997 | None:intergenic |
| CACTATTCCTAAAATCATCC+TGG | 0.521129 | 4.2:+8404220 | None:intergenic |
| AATATCCGGTTCCCGCAGCC+CGG | 0.524402 | 4.2:+8404658 | None:intergenic |
| AGTGCCTTCGGCTTTCCAAT+CGG | 0.524558 | 4.2:+8404612 | None:intergenic |
| ATTTGTATAAGTTTGATCCA+TGG | 0.528456 | 4.2:-8404861 | MS.gene030578:CDS |
| AAACGGTTCAAGGCCGAACC+GGG | 0.528831 | 4.2:-8404676 | MS.gene030578:CDS |
| TCAGATCAAGATGAACGGCC+AGG | 0.532358 | 4.2:-8404238 | MS.gene030578:CDS |
| GTCGGGTGAAATCTGAAGCC+AGG | 0.534952 | 4.2:+8404964 | None:intergenic |
| GTACACTGACACATCAGATT+CGG | 0.536856 | 4.2:-8404190 | MS.gene030578:CDS |
| TGGCCGTTCATCTTGATCTG+AGG | 0.540560 | 4.2:+8404240 | None:intergenic |
| ACCGGATATTGGAAGGCGAC+CGG | 0.540712 | 4.2:-8404645 | MS.gene030578:CDS |
| TGCGGGAACCGGATATTGGA+AGG | 0.555135 | 4.2:-8404652 | MS.gene030578:CDS |
| ATAACAAATTAAATTTACTT+GGG | 0.555352 | 4.2:+8403937 | None:intergenic |
| TGACAAGCTCATCATCAGTC+GGG | 0.555923 | 4.2:+8404947 | None:intergenic |
| ACCGGAGCTGATAAGCCGAT+TGG | 0.556049 | 4.2:-8404627 | MS.gene030578:CDS |
| ACTGATCCTGAGGGGCAAAA+GGG | 0.560321 | 4.2:+8404007 | None:intergenic |
| ATGTACGTACTCTTAAATTG+TGG | 0.565839 | 4.2:+8404472 | None:intergenic |
| CTCTTTACGGTGAGAAAGAG+TGG | 0.566657 | 4.2:-8404731 | MS.gene030578:CDS |
| AAGATTCAACTGAAAATCAA+AGG | 0.566776 | 4.2:+8404050 | None:intergenic |
| CTCAAGCGGTTCTGAGCACG+TGG | 0.568997 | 4.2:-8404148 | MS.gene030578:CDS |
| ATTGAATATACGCGAATGCA+AGG | 0.577743 | 4.2:-8405003 | None:intergenic |
| TAAGTACCTGGAAGATGCCA+TGG | 0.577977 | 4.2:+8404844 | None:intergenic |
| CTTTGAACTTCCTTATCGCA+CGG | 0.587532 | 4.2:+8404120 | None:intergenic |
| AGGGATCGTAAATATCCAAA+CGG | 0.593976 | 4.2:-8404693 | MS.gene030578:CDS |
| TTGACAAGCTCATCATCAGT+CGG | 0.594991 | 4.2:+8404946 | None:intergenic |
| GAAAATCAAAGGCTGAAACT+GGG | 0.599958 | 4.2:+8404061 | None:intergenic |
| AATACAAATTCATTCCACTT+GGG | 0.602517 | 4.2:+8404093 | None:intergenic |
| ACACATCAGATTCGGTGCCA+CGG | 0.603238 | 4.2:-8404182 | MS.gene030578:CDS |
| TCATTTGGTACTGATCCTGA+GGG | 0.603683 | 4.2:+8403998 | None:intergenic |
| AAGTTCAAAGTGAGCCCAAG+TGG | 0.609329 | 4.2:-8404107 | MS.gene030578:CDS |
| TTGGAAAGCCGAAGGCACTT+GGG | 0.610579 | 4.2:-8404608 | MS.gene030578:CDS |
| CGGTTTCACACCGACTCAAG+CGG | 0.614416 | 4.2:-8404162 | MS.gene030578:CDS |
| GTGCTCAGAACCGCTTGAGT+CGG | 0.630980 | 4.2:+8404152 | None:intergenic |
| CTTGAGTCGGTGTGAAACCG+TGG | 0.640274 | 4.2:+8404165 | None:intergenic |
| AATAGGAACAGCTATAGGGA+GGG | 0.642151 | 4.2:+8404897 | None:intergenic |
| GGAGCATTAGAATTACCACC+TGG | 0.643311 | 4.2:-8404982 | MS.gene030578:CDS |
| GCTTCCTCAGAAAACAGTGG+TGG | 0.648220 | 4.2:+8404285 | None:intergenic |
| TAATAGGAACAGCTATAGGG+AGG | 0.649675 | 4.2:+8404896 | None:intergenic |
| TATGCTGGCAAAGCTCCCAA+AGG | 0.653423 | 4.2:-8404564 | MS.gene030578:CDS |
| AAACCTCAGATCAAGATGAA+CGG | 0.656051 | 4.2:-8404243 | MS.gene030578:CDS |
| TAAGCCGATTGGAAAGCCGA+AGG | 0.696583 | 4.2:-8404616 | MS.gene030578:CDS |
| TGAGCTTCCTCAGAAAACAG+TGG | 0.712517 | 4.2:+8404282 | None:intergenic |
| GGGTGAAATCTGAAGCCAGG+TGG | 0.722817 | 4.2:+8404967 | None:intergenic |
| CATTTGGTACTGATCCTGAG+GGG | 0.747553 | 4.2:+8403999 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATAAAAGAATTGGTT+TGG | + | chr4.2:8404497-8404516 | None:intergenic | 15.0% |
| !!! | AAATCAATTTCTTTGATAAT+AGG | + | chr4.2:8404062-8404081 | None:intergenic | 15.0% |
| ! | AAGATTCAACTGAAAATCAA+AGG | + | chr4.2:8404892-8404911 | None:intergenic | 25.0% |
| ! | AAGTGGAATGAATTTGTATT+GGG | - | chr4.2:8404849-8404868 | MS.gene030578:intron | 25.0% |
| ! | AATACAAATTCATTCCACTT+GGG | + | chr4.2:8404849-8404868 | None:intergenic | 25.0% |
| ! | ATTTGTATAAGTTTGATCCA+TGG | - | chr4.2:8404078-8404097 | MS.gene030578:CDS | 25.0% |
| ! | GTTGTATGTATTTACAGAAA+TGG | - | chr4.2:8404185-8404204 | MS.gene030578:CDS | 25.0% |
| !! | GTACCAAATGAATCAATTTT+CGG | - | chr4.2:8404953-8404972 | MS.gene030578:CDS | 25.0% |
| !! | TACCAAATGAATCAATTTTC+GGG | - | chr4.2:8404954-8404973 | MS.gene030578:CDS | 25.0% |
| !! | TGATTTTCAGTTGAATCTTA+TGG | - | chr4.2:8404893-8404912 | MS.gene030578:CDS | 25.0% |
| !!! | AAATAAAAGAATTGGTTTGG+TGG | + | chr4.2:8404494-8404513 | None:intergenic | 25.0% |
| !!! | ATTGTGGTTATTTTTTGAAG+CGG | + | chr4.2:8404454-8404473 | None:intergenic | 25.0% |
| !!! | CAATTGGTTTTAATTCCTTT+GGG | + | chr4.2:8404393-8404412 | None:intergenic | 25.0% |
| ATGTACGTACTCTTAAATTG+TGG | + | chr4.2:8404470-8404489 | None:intergenic | 30.0% | |
| CAAGTGGAATGAATTTGTAT+TGG | - | chr4.2:8404848-8404867 | MS.gene030578:intron | 30.0% | |
| CAATACAAATTCATTCCACT+TGG | + | chr4.2:8404850-8404869 | None:intergenic | 30.0% | |
| CCAAAGGAATTAAAACCAAT+TGG | - | chr4.2:8404391-8404410 | MS.gene030578:intron | 30.0% | |
| GAAAATAAAGAGTAAGTACC+TGG | + | chr4.2:8404110-8404129 | None:intergenic | 30.0% | |
| GTCGAATTTACAACAAGAAA+GGG | - | chr4.2:8404604-8404623 | MS.gene030578:CDS | 30.0% | |
| TGATAATAGGAACAGCTATA+GGG | + | chr4.2:8404049-8404068 | None:intergenic | 30.0% | |
| TGTCGAATTTACAACAAGAA+AGG | - | chr4.2:8404603-8404622 | MS.gene030578:CDS | 30.0% | |
| TTTACAGAAATGGCTCTTTA+CGG | - | chr4.2:8404195-8404214 | MS.gene030578:CDS | 30.0% | |
| ! | AACCCGAAAATTGATTCATT+TGG | + | chr4.2:8404959-8404978 | None:intergenic | 30.0% |
| ! | ATTAATTGCAGCTTGATGAT+TGG | - | chr4.2:8404574-8404593 | MS.gene030578:CDS | 30.0% |
| ! | TTAATTGCAGCTTGATGATT+GGG | - | chr4.2:8404575-8404594 | MS.gene030578:CDS | 30.0% |
| ! | TTGATAATAGGAACAGCTAT+AGG | + | chr4.2:8404050-8404069 | None:intergenic | 30.0% |
| !!! | AAATGAATCAATTTTCGGGT+TGG | - | chr4.2:8404958-8404977 | MS.gene030578:CDS | 30.0% |
| !!! | CCAATTGGTTTTAATTCCTT+TGG | + | chr4.2:8404394-8404413 | None:intergenic | 30.0% |
| AAACCTCAGATCAAGATGAA+CGG | - | chr4.2:8404696-8404715 | MS.gene030578:CDS | 35.0% | |
| AGGGATCGTAAATATCCAAA+CGG | - | chr4.2:8404246-8404265 | MS.gene030578:CDS | 35.0% | |
| ATACTCATGCATGATCCAAT+TGG | + | chr4.2:8404409-8404428 | None:intergenic | 35.0% | |
| CACTATTCCTAAAATCATCC+TGG | + | chr4.2:8404722-8404741 | None:intergenic | 35.0% | |
| CAGTTGAATCTTATGGATGA+TGG | - | chr4.2:8404900-8404919 | MS.gene030578:CDS | 35.0% | |
| GAAAATCAAAGGCTGAAACT+GGG | + | chr4.2:8404881-8404900 | None:intergenic | 35.0% | |
| GTAAATATCCAAACGGTTCA+AGG | - | chr4.2:8404253-8404272 | MS.gene030578:CDS | 35.0% | |
| TGAAAATCAAAGGCTGAAAC+TGG | + | chr4.2:8404882-8404901 | None:intergenic | 35.0% | |
| TTTGGATATTTACGATCCCT+TGG | + | chr4.2:8404246-8404265 | None:intergenic | 35.0% | |
| !! | AAAGCACTTGTTTTCTATGC+TGG | - | chr4.2:8404360-8404379 | MS.gene030578:intron | 35.0% |
| !!! | AGTGGTATTTTTTCTCTCCA+AGG | - | chr4.2:8404226-8404245 | MS.gene030578:CDS | 35.0% |
| !!! | GTGGTATTTTTTCTCTCCAA+GGG | - | chr4.2:8404227-8404246 | MS.gene030578:CDS | 35.0% |
| AATAGGAACAGCTATAGGGA+GGG | + | chr4.2:8404045-8404064 | None:intergenic | 40.0% | |
| CTTTGAACTTCCTTATCGCA+CGG | + | chr4.2:8404822-8404841 | None:intergenic | 40.0% | |
| GTACACTGACACATCAGATT+CGG | - | chr4.2:8404749-8404768 | MS.gene030578:intron | 40.0% | |
| TAATAGGAACAGCTATAGGG+AGG | + | chr4.2:8404046-8404065 | None:intergenic | 40.0% | |
| TTCTTTATCCCAAGTGCCTT+CGG | + | chr4.2:8404342-8404361 | None:intergenic | 40.0% | |
| TTGACAAGCTCATCATCAGT+CGG | + | chr4.2:8403996-8404015 | None:intergenic | 40.0% | |
| ! | TAAACCACCACTGTTTTCTG+AGG | - | chr4.2:8404650-8404669 | MS.gene030578:CDS | 40.0% |
| !! | TCATTTGGTACTGATCCTGA+GGG | + | chr4.2:8404944-8404963 | None:intergenic | 40.0% |
| !! | TTCATTTGGTACTGATCCTG+AGG | + | chr4.2:8404945-8404964 | None:intergenic | 40.0% |
| AAGTTCAAAGTGAGCCCAAG+TGG | - | chr4.2:8404832-8404851 | MS.gene030578:intron | 45.0% | |
| CTCTTTACGGTGAGAAAGAG+TGG | - | chr4.2:8404208-8404227 | MS.gene030578:CDS | 45.0% | |
| TAAGTACCTGGAAGATGCCA+TGG | + | chr4.2:8404098-8404117 | None:intergenic | 45.0% | |
| TGACAAGCTCATCATCAGTC+GGG | + | chr4.2:8403995-8404014 | None:intergenic | 45.0% | |
| TGAGCTTCCTCAGAAAACAG+TGG | + | chr4.2:8404660-8404679 | None:intergenic | 45.0% | |
| TTTGATCCATGGCATCTTCC+AGG | - | chr4.2:8404089-8404108 | MS.gene030578:CDS | 45.0% | |
| ! | GGAGCATTAGAATTACCACC+TGG | - | chr4.2:8403957-8403976 | MS.gene030578:CDS | 45.0% |
| ! | TGAACGGCCAGGATGATTTT+AGG | - | chr4.2:8404712-8404731 | MS.gene030578:CDS | 45.0% |
| !! | CATTTGGTACTGATCCTGAG+GGG | + | chr4.2:8404943-8404962 | None:intergenic | 45.0% |
| !! | AAAAAATAAAATAAAAGAAT+TGG | + | chr4.2:8404502-8404521 | None:intergenic | 5.0% |
| ACTGATCCTGAGGGGCAAAA+GGG | + | chr4.2:8404935-8404954 | None:intergenic | 50.0% | |
| AGTGCCTTCGGCTTTCCAAT+CGG | + | chr4.2:8404330-8404349 | None:intergenic | 50.0% | |
| CAAAGGCTGAAACTGGGTCT+GGG | + | chr4.2:8404875-8404894 | None:intergenic | 50.0% | |
| GCTTCCTCAGAAAACAGTGG+TGG | + | chr4.2:8404657-8404676 | None:intergenic | 50.0% | |
| TAAGCCGATTGGAAAGCCGA+AGG | - | chr4.2:8404323-8404342 | MS.gene030578:CDS | 50.0% | |
| TACTGATCCTGAGGGGCAAA+AGG | + | chr4.2:8404936-8404955 | None:intergenic | 50.0% | |
| TATGCTGGCAAAGCTCCCAA+AGG | - | chr4.2:8404375-8404394 | MS.gene030578:intron | 50.0% | |
| TCAAAGGCTGAAACTGGGTC+TGG | + | chr4.2:8404876-8404895 | None:intergenic | 50.0% | |
| TCAGATCAAGATGAACGGCC+AGG | - | chr4.2:8404701-8404720 | MS.gene030578:CDS | 50.0% | |
| TGGCCGTTCATCTTGATCTG+AGG | + | chr4.2:8404702-8404721 | None:intergenic | 50.0% | |
| ! | TCCAATCGGCTTATCAGCTC+CGG | + | chr4.2:8404316-8404335 | None:intergenic | 50.0% |
| !! | ACACATCAGATTCGGTGCCA+CGG | - | chr4.2:8404757-8404776 | MS.gene030578:intron | 50.0% |
| !! | ATTGGAAAGCCGAAGGCACT+TGG | - | chr4.2:8404330-8404349 | MS.gene030578:CDS | 50.0% |
| !! | TTGGAAAGCCGAAGGCACTT+GGG | - | chr4.2:8404331-8404350 | MS.gene030578:CDS | 50.0% |
| AAACGGTTCAAGGCCGAACC+GGG | - | chr4.2:8404263-8404282 | MS.gene030578:CDS | 55.0% | |
| ACCGGAGCTGATAAGCCGAT+TGG | - | chr4.2:8404312-8404331 | MS.gene030578:CDS | 55.0% | |
| ACCGGATATTGGAAGGCGAC+CGG | - | chr4.2:8404294-8404313 | MS.gene030578:CDS | 55.0% | |
| CAAACGGTTCAAGGCCGAAC+CGG | - | chr4.2:8404262-8404281 | MS.gene030578:CDS | 55.0% | |
| CGTGGTTTCACCGTGCGATA+AGG | - | chr4.2:8404809-8404828 | MS.gene030578:intron | 55.0% | |
| CTTGAGTCGGTGTGAAACCG+TGG | + | chr4.2:8404777-8404796 | None:intergenic | 55.0% | |
| GTGCTCAGAACCGCTTGAGT+CGG | + | chr4.2:8404790-8404809 | None:intergenic | 55.0% | |
| TCCGGTCGCCTTCCAATATC+CGG | + | chr4.2:8404298-8404317 | None:intergenic | 55.0% | |
| TGCGGGAACCGGATATTGGA+AGG | - | chr4.2:8404287-8404306 | MS.gene030578:CDS | 55.0% | |
| ! | AGATGACCCTTTTGCCCCTC+AGG | - | chr4.2:8404926-8404945 | MS.gene030578:CDS | 55.0% |
| ! | GGGTGAAATCTGAAGCCAGG+TGG | + | chr4.2:8403975-8403994 | None:intergenic | 55.0% |
| ! | GTCGGGTGAAATCTGAAGCC+AGG | + | chr4.2:8403978-8403997 | None:intergenic | 55.0% |
| !! | CGGTTTCACACCGACTCAAG+CGG | - | chr4.2:8404777-8404796 | MS.gene030578:intron | 55.0% |
| AATATCCGGTTCCCGCAGCC+CGG | + | chr4.2:8404284-8404303 | None:intergenic | 60.0% | |
| ! | CGGTTCGGCCTTGAACCGTT+TGG | + | chr4.2:8404264-8404283 | None:intergenic | 60.0% |
| !! | CTCAAGCGGTTCTGAGCACG+TGG | - | chr4.2:8404791-8404810 | MS.gene030578:intron | 60.0% |
| GGGCTGCGGGAACCGGATAT+TGG | - | chr4.2:8404283-8404302 | MS.gene030578:CDS | 65.0% | |
| TTCAAGGCCGAACCGGGCTG+CGG | - | chr4.2:8404269-8404288 | MS.gene030578:CDS | 65.0% | |
| TCAAGGCCGAACCGGGCTGC+GGG | - | chr4.2:8404270-8404289 | MS.gene030578:CDS | 70.0% | |
| CCGAACCGGGCTGCGGGAAC+CGG | - | chr4.2:8404276-8404295 | MS.gene030578:CDS | 75.0% | |
| CCGGTTCCCGCAGCCCGGTT+CGG | + | chr4.2:8404279-8404298 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 8403951 | 8405010 | 8403951 | ID=MS.gene030578 |
| chr4.2 | mRNA | 8403951 | 8405010 | 8403951 | ID=MS.gene030578.t1;Parent=MS.gene030578 |
| chr4.2 | exon | 8404851 | 8405010 | 8404851 | ID=MS.gene030578.t1.exon1;Parent=MS.gene030578.t1 |
| chr4.2 | CDS | 8404851 | 8405010 | 8404851 | ID=cds.MS.gene030578.t1;Parent=MS.gene030578.t1 |
| chr4.2 | exon | 8404482 | 8404759 | 8404482 | ID=MS.gene030578.t1.exon2;Parent=MS.gene030578.t1 |
| chr4.2 | CDS | 8404482 | 8404759 | 8404482 | ID=cds.MS.gene030578.t1;Parent=MS.gene030578.t1 |
| chr4.2 | exon | 8403951 | 8404376 | 8403951 | ID=MS.gene030578.t1.exon3;Parent=MS.gene030578.t1 |
| chr4.2 | CDS | 8403951 | 8404376 | 8403951 | ID=cds.MS.gene030578.t1;Parent=MS.gene030578.t1 |
| Gene Sequence |
| Protein sequence |
