Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030582.t1 | XP_013446890.1 | 96.3 | 301 | 9 | 1 | 1 | 301 | 1 | 299 | 2.30E-129 | 471.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030582.t1 | Q8VWK4 | 56.4 | 250 | 98 | 6 | 1 | 245 | 1 | 244 | 2.9e-64 | 246.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030582.t1 | A0A072TU28 | 96.3 | 301 | 9 | 1 | 1 | 301 | 1 | 299 | 1.6e-129 | 471.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene030582.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030582.t1 | MTR_8g494240 | 96.346 | 301 | 9 | 1 | 1 | 301 | 1 | 299 | 0.0 | 581 |
| MS.gene030582.t1 | MTR_8g494240 | 96.296 | 297 | 9 | 1 | 1 | 297 | 1 | 295 | 0.0 | 574 |
| MS.gene030582.t1 | MTR_8g494240 | 51.786 | 112 | 22 | 4 | 3 | 114 | 304 | 383 | 2.12e-19 | 87.8 |
| MS.gene030582.t1 | MTR_8g494240 | 95.973 | 298 | 10 | 1 | 1 | 298 | 1 | 296 | 0.0 | 573 |
| MS.gene030582.t1 | MTR_2g031870 | 76.689 | 296 | 65 | 2 | 1 | 294 | 1 | 294 | 6.24e-132 | 377 |
| MS.gene030582.t1 | MTR_8g092810 | 67.717 | 254 | 69 | 3 | 1 | 243 | 1 | 252 | 3.40e-111 | 330 |
| MS.gene030582.t1 | MTR_2g031870 | 69.257 | 296 | 61 | 3 | 1 | 294 | 1 | 268 | 7.65e-107 | 312 |
| MS.gene030582.t1 | MTR_0095s0040 | 94.268 | 157 | 3 | 2 | 1 | 153 | 1 | 155 | 8.22e-103 | 301 |
| MS.gene030582.t1 | MTR_5g015340 | 52.560 | 293 | 134 | 5 | 1 | 292 | 1 | 289 | 1.62e-64 | 205 |
| MS.gene030582.t1 | MTR_5g015340 | 52.560 | 293 | 134 | 5 | 1 | 292 | 1 | 289 | 1.62e-64 | 205 |
| MS.gene030582.t1 | MTR_4g097130 | 49.191 | 309 | 135 | 7 | 1 | 292 | 1 | 304 | 4.85e-64 | 204 |
| MS.gene030582.t1 | MTR_4g097130 | 49.191 | 309 | 135 | 7 | 1 | 292 | 1 | 304 | 6.26e-64 | 204 |
| MS.gene030582.t1 | MTR_5g015340 | 52.560 | 293 | 134 | 5 | 1 | 292 | 1 | 289 | 3.51e-63 | 204 |
| MS.gene030582.t1 | MTR_4g097130 | 47.452 | 314 | 138 | 5 | 1 | 292 | 1 | 309 | 1.12e-62 | 201 |
| MS.gene030582.t1 | MTR_1g088180 | 62.295 | 122 | 43 | 2 | 125 | 246 | 295 | 413 | 1.01e-40 | 147 |
| MS.gene030582.t1 | MTR_8g018410 | 40.314 | 191 | 103 | 4 | 1 | 187 | 1 | 184 | 4.15e-34 | 126 |
| MS.gene030582.t1 | MTR_1g041765 | 64.368 | 87 | 27 | 2 | 1 | 87 | 1 | 83 | 8.66e-30 | 112 |
| MS.gene030582.t1 | MTR_2g099610 | 34.545 | 220 | 103 | 5 | 1 | 190 | 1 | 209 | 1.15e-28 | 112 |
| MS.gene030582.t1 | MTR_2g031880 | 54.464 | 112 | 35 | 5 | 61 | 168 | 3 | 102 | 3.01e-21 | 87.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030582.t1 | AT1G49950 | 60.000 | 305 | 109 | 7 | 1 | 299 | 1 | 298 | 9.34e-84 | 254 |
| MS.gene030582.t1 | AT1G49950 | 60.000 | 305 | 109 | 7 | 1 | 299 | 1 | 298 | 9.34e-84 | 254 |
| MS.gene030582.t1 | AT1G49950 | 60.000 | 305 | 109 | 7 | 1 | 299 | 1 | 298 | 9.34e-84 | 254 |
| MS.gene030582.t1 | AT5G67580 | 49.495 | 297 | 141 | 5 | 1 | 292 | 1 | 293 | 8.00e-57 | 185 |
| MS.gene030582.t1 | AT5G67580 | 49.495 | 297 | 141 | 5 | 1 | 292 | 1 | 293 | 8.00e-57 | 185 |
| MS.gene030582.t1 | AT3G49850 | 48.185 | 303 | 142 | 6 | 1 | 297 | 1 | 294 | 1.18e-55 | 182 |
| MS.gene030582.t1 | AT3G49850 | 48.185 | 303 | 142 | 6 | 1 | 297 | 1 | 294 | 1.18e-55 | 182 |
| MS.gene030582.t1 | AT1G72740 | 35.688 | 269 | 153 | 5 | 1 | 269 | 1 | 249 | 8.11e-35 | 127 |
| MS.gene030582.t1 | AT1G72740 | 35.273 | 275 | 152 | 6 | 1 | 269 | 1 | 255 | 1.69e-32 | 122 |
| MS.gene030582.t1 | AT1G17520 | 36.869 | 198 | 108 | 4 | 1 | 187 | 1 | 192 | 1.93e-26 | 105 |
| MS.gene030582.t1 | AT1G17520 | 37.186 | 199 | 107 | 5 | 1 | 187 | 1 | 193 | 1.04e-25 | 103 |
| MS.gene030582.t1 | AT1G17520 | 38.021 | 192 | 102 | 4 | 1 | 181 | 1 | 186 | 1.16e-25 | 103 |
| MS.gene030582.t1 | AT1G17520 | 38.342 | 193 | 101 | 5 | 1 | 181 | 1 | 187 | 6.27e-25 | 102 |
| MS.gene030582.t1 | AT1G54260 | 47.826 | 69 | 36 | 0 | 124 | 192 | 6 | 74 | 8.59e-13 | 66.2 |
Find 87 sgRNAs with CRISPR-Local
Find 327 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACCCACCCATGTTATTAT+TGG | 0.233775 | 4.2:-8617592 | MS.gene030582:CDS |
| GAGCTCCAGGGAGAAGTCTA+AGG | 0.278068 | 4.2:-8620983 | MS.gene030582:CDS |
| GCAGAAAATCTCTATGAAAT+TGG | 0.285616 | 4.2:-8617562 | MS.gene030582:CDS |
| ATGGCTATCACTGCCGTTAC+TGG | 0.296926 | 4.2:-8620910 | MS.gene030582:CDS |
| CAGATTAGATAACCTTATAT+TGG | 0.305916 | 4.2:-8619921 | MS.gene030582:CDS |
| TGTGGTTTGGATAGGATAAA+TGG | 0.317432 | 4.2:-8621035 | MS.gene030582:intron |
| AGTCTGCCGGTGGCCGGTAT+TGG | 0.318430 | 4.2:+8618652 | None:intergenic |
| CCAAGCATGGGGTGGGAAAA+TGG | 0.324906 | 4.2:-8621239 | MS.gene030582:CDS |
| TAGATATAGCTTCCAATATA+AGG | 0.325779 | 4.2:+8619909 | None:intergenic |
| AGAGACATGCCGCACATTCC+TGG | 0.352882 | 4.2:-8620838 | MS.gene030582:CDS |
| AATTTGAGTGTGACGGGAAA+TGG | 0.361800 | 4.2:-8621009 | MS.gene030582:CDS |
| CGGGAAATGGATCGAGCTCC+AGG | 0.365659 | 4.2:-8620996 | MS.gene030582:CDS |
| AAATCTATCTCAGACTTTGT+AGG | 0.366127 | 4.2:+8617519 | None:intergenic |
| TCTGATGTCCATTTCTGCTT+AGG | 0.367914 | 4.2:+8621291 | None:intergenic |
| GAATCATCCGGTACCGAAAC+AGG | 0.369840 | 4.2:-8620944 | MS.gene030582:CDS |
| TTCCTGGTCCTGGTCCAAAA+AGG | 0.410764 | 4.2:-8620822 | MS.gene030582:intron |
| TTCAGGTGAAACGCAGGTAT+AGG | 0.416662 | 4.2:-8617650 | MS.gene030582:intron |
| AACAAGACACGATTAAATTC+AGG | 0.435715 | 4.2:+8621198 | None:intergenic |
| CTTCCTCTGTCTGAATATGC+AGG | 0.439039 | 4.2:+8617615 | None:intergenic |
| TGGGTGCTCCTAAGCAGAAA+TGG | 0.442291 | 4.2:-8621299 | MS.gene030582:CDS |
| GAAACAGGATGACAACTCTA+TGG | 0.446572 | 4.2:-8620929 | MS.gene030582:CDS |
| TTGTCATCCTGTTTCGGTAC+CGG | 0.459989 | 4.2:+8620937 | None:intergenic |
| ATAGAGTTGTCATCCTGTTT+CGG | 0.460910 | 4.2:+8620931 | None:intergenic |
| TGGAGAAATTTGAGTGTGAC+GGG | 0.461904 | 4.2:-8621015 | MS.gene030582:CDS |
| GAGGAAGCAGCTCTTAAAGC+TGG | 0.470003 | 4.2:-8621267 | MS.gene030582:CDS |
| CGCCATAGCAGAAGCTGAAG+AGG | 0.472911 | 4.2:-8617418 | MS.gene030582:CDS |
| CTCTTGAGACTTGAAGAGGC+TGG | 0.475264 | 4.2:+8620857 | None:intergenic |
| AACTATTGCTTCTTTCATAG+AGG | 0.478041 | 4.2:-8619855 | MS.gene030582:intron |
| TGCCTCTTCAGCTTCTGCTA+TGG | 0.491455 | 4.2:+8617416 | None:intergenic |
| CCTCCCTTCCAATAATAACA+TGG | 0.495257 | 4.2:+8617584 | None:intergenic |
| AGTCTAAGGGAGCAATCAAA+AGG | 0.496855 | 4.2:-8620969 | MS.gene030582:CDS |
| TTCCTCTGTCTGAATATGCA+GGG | 0.497922 | 4.2:+8617616 | None:intergenic |
| AATCTATCTCAGACTTTGTA+GGG | 0.500580 | 4.2:+8617520 | None:intergenic |
| AAATCTCTATGAAATTGGAC+AGG | 0.500872 | 4.2:-8617557 | MS.gene030582:CDS |
| AAGCTGGAGTTGCCAAGCAT+GGG | 0.503893 | 4.2:-8621251 | MS.gene030582:CDS |
| TGCTCCCTTAGACTTCTCCC+TGG | 0.506852 | 4.2:+8620978 | None:intergenic |
| ATGCCGCACATTCCTGGTCC+TGG | 0.511744 | 4.2:-8620832 | MS.gene030582:CDS |
| GATAGATTTAGAAATAGAAA+AGG | 0.512772 | 4.2:-8617505 | MS.gene030582:CDS |
| TCGCTCAAATGTCGATCTCA+AGG | 0.519219 | 4.2:-8621172 | MS.gene030582:intron |
| ATATCTAGCTTGAATGAGCT+TGG | 0.522209 | 4.2:-8619893 | MS.gene030582:CDS |
| AATCAAAAGGGTGAATCATC+CGG | 0.527127 | 4.2:-8620956 | MS.gene030582:CDS |
| ATCAACAATTTCATCATCAT+CGG | 0.527962 | 4.2:+8620882 | None:intergenic |
| AGCTGAAGAGGCAGCAAAGG+AGG | 0.528236 | 4.2:-8617406 | MS.gene030582:CDS |
| AAAATGGCGTACAATAATCA+AGG | 0.529843 | 4.2:-8621223 | MS.gene030582:CDS |
| ATGGAGAAATTTGAGTGTGA+CGG | 0.530825 | 4.2:-8621016 | MS.gene030582:CDS |
| ATCTAGCGGAAAACTGATCA+AGG | 0.531425 | 4.2:-8618592 | MS.gene030582:intron |
| AAAGCTGGAGTTGCCAAGCA+TGG | 0.532704 | 4.2:-8621252 | MS.gene030582:CDS |
| AGAAGCTGAAGAGGCAGCAA+AGG | 0.535223 | 4.2:-8617409 | MS.gene030582:CDS |
| CCACCCATGTTATTATTGGA+AGG | 0.535733 | 4.2:-8617588 | MS.gene030582:CDS |
| TCTTGAGACTTGAAGAGGCT+GGG | 0.541739 | 4.2:+8620858 | None:intergenic |
| CTTCACACTTCAATCAAGAC+GGG | 0.544296 | 4.2:+8616742 | None:intergenic |
| CTGTCTGAATATGCAGGGGT+AGG | 0.544633 | 4.2:+8617621 | None:intergenic |
| GGCAGCCTCTTGAGCAGACA+TGG | 0.544900 | 4.2:+8617476 | None:intergenic |
| AGAGGCAGCAAAGGAGGCAG+AGG | 0.547850 | 4.2:-8617400 | MS.gene030582:CDS |
| CTCTTCAGCTTCTGCTATGG+CGG | 0.551526 | 4.2:+8617419 | None:intergenic |
| GACTGCTCGAGCAGCATATG+CGG | 0.551764 | 4.2:+8617455 | None:intergenic |
| AAGGTCCATGTCTGCTCAAG+AGG | 0.553221 | 4.2:-8617481 | MS.gene030582:CDS |
| ATTTAGAAATAGAAAAGGTA+AGG | 0.556910 | 4.2:-8617500 | MS.gene030582:CDS |
| TGGAGTTGCCAAGCATGGGG+TGG | 0.557397 | 4.2:-8621247 | MS.gene030582:CDS |
| CACCCATGTTATTATTGGAA+GGG | 0.560560 | 4.2:-8617587 | MS.gene030582:CDS |
| GGAGTTGCCAAGCATGGGGT+GGG | 0.561098 | 4.2:-8621246 | MS.gene030582:CDS |
| CTAAAGTATCTTACATCTAG+CGG | 0.565433 | 4.2:-8618606 | MS.gene030582:CDS |
| TCTAGCTTGAATGAGCTTGG+TGG | 0.575119 | 4.2:-8619890 | MS.gene030582:CDS |
| CCTTCCAATAATAACATGGG+TGG | 0.576377 | 4.2:+8617588 | None:intergenic |
| GTAGGACCAATACCGGCCAC+CGG | 0.579738 | 4.2:-8618658 | MS.gene030582:intron |
| TCTTCACACTTCAATCAAGA+CGG | 0.581316 | 4.2:+8616741 | None:intergenic |
| GTCTAAGGGAGCAATCAAAA+GGG | 0.586208 | 4.2:-8620968 | MS.gene030582:CDS |
| TCCTCTGTCTGAATATGCAG+GGG | 0.589128 | 4.2:+8617617 | None:intergenic |
| AGCTCCAGGGAGAAGTCTAA+GGG | 0.592466 | 4.2:-8620982 | MS.gene030582:CDS |
| AGCTGCAATGAAAACACTGA+AGG | 0.594087 | 4.2:-8617337 | MS.gene030582:CDS |
| CCATGTTATTATTGGAAGGG+AGG | 0.596204 | 4.2:-8617584 | MS.gene030582:CDS |
| ATGTCTCTTGAGACTTGAAG+AGG | 0.598346 | 4.2:+8620853 | None:intergenic |
| CTCCCTTCCAATAATAACAT+GGG | 0.599995 | 4.2:+8617585 | None:intergenic |
| ATCATCGGATGGACCAGTAA+CGG | 0.608006 | 4.2:+8620897 | None:intergenic |
| TTATATTTCAGGTGAAACGC+AGG | 0.613161 | 4.2:-8617656 | MS.gene030582:intron |
| ACAATTTCATCATCATCGGA+TGG | 0.613826 | 4.2:+8620886 | None:intergenic |
| GCTGCAATGAAAACACTGAA+GGG | 0.616290 | 4.2:-8617336 | MS.gene030582:CDS |
| CTTCCAATAATAACATGGGT+GGG | 0.618304 | 4.2:+8617589 | None:intergenic |
| GCAGAAATGGACATCAGAAG+AGG | 0.618364 | 4.2:-8621286 | MS.gene030582:CDS |
| GGACCAGGACCAGGAATGTG+CGG | 0.620041 | 4.2:+8620829 | None:intergenic |
| CTGCAATGAAAACACTGAAG+GGG | 0.632379 | 4.2:-8617335 | MS.gene030582:CDS |
| AGCTGGAGTTGCCAAGCATG+GGG | 0.639684 | 4.2:-8621250 | MS.gene030582:CDS |
| GCCAAGACTTACCGTCTCTG+AGG | 0.642080 | 4.2:+8617305 | None:intergenic |
| GGGGAGAAACACCTCAGAGA+CGG | 0.644348 | 4.2:-8617316 | MS.gene030582:intron |
| GGGAAATGGATCGAGCTCCA+GGG | 0.651429 | 4.2:-8620995 | MS.gene030582:CDS |
| AATCTCTATGAAATTGGACA+GGG | 0.658728 | 4.2:-8617556 | MS.gene030582:CDS |
| ACCCCTGCATATTCAGACAG+AGG | 0.679893 | 4.2:-8617618 | MS.gene030582:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTTAACCAAAAAAAATA+TGG | + | chr4.2:8617277-8617296 | None:intergenic | 10.0% |
| !! | ATTACAATTTATATAACAAA+TGG | + | chr4.2:8617925-8617944 | None:intergenic | 10.0% |
| !! | TATTTAACCAAAAAAAATAT+GGG | + | chr4.2:8617276-8617295 | None:intergenic | 10.0% |
| !! | TTTACATATGATATTTATTT+AGG | - | chr4.2:8621057-8621076 | MS.gene030582:intron | 10.0% |
| !!! | ATATTTTTTTTGGTTAAATA+TGG | - | chr4.2:8617276-8617295 | MS.gene030582:intron | 10.0% |
| !!! | TACATTATACAAATTTTTTA+TGG | - | chr4.2:8617985-8618004 | MS.gene030582:intron | 10.0% |
| !! | AAAGATTAATGTTATTATGT+TGG | + | chr4.2:8620141-8620160 | None:intergenic | 15.0% |
| !! | AAAGTATATTGAATTAATGT+TGG | - | chr4.2:8616966-8616985 | MS.gene030582:intron | 15.0% |
| !! | AAATTTGTATAATGTAAACA+TGG | + | chr4.2:8617981-8618000 | None:intergenic | 15.0% |
| !! | ACAAATATATATATTCTACA+AGG | + | chr4.2:8620109-8620128 | None:intergenic | 15.0% |
| !! | ATGAAGAAATTACATTATAT+TGG | - | chr4.2:8619214-8619233 | MS.gene030582:intron | 15.0% |
| !! | CAAATATATATATTCTACAA+GGG | + | chr4.2:8620108-8620127 | None:intergenic | 15.0% |
| !! | TGTTATAGTATTACAATAAA+AGG | + | chr4.2:8620780-8620799 | None:intergenic | 15.0% |
| !!! | ATTACAATTCAAATCATTTT+AGG | + | chr4.2:8621163-8621182 | None:intergenic | 15.0% |
| !! | AAATCAAGATAATGAAATCA+GGG | + | chr4.2:8617835-8617854 | None:intergenic | 20.0% |
| !! | AATTCATTTAATTCAGTAGT+TGG | - | chr4.2:8618267-8618286 | MS.gene030582:intron | 20.0% |
| !! | ACAATTTATATAACAAATGG+AGG | + | chr4.2:8617922-8617941 | None:intergenic | 20.0% |
| !! | ATCTACATATGATACTTATT+TGG | - | chr4.2:8620877-8620896 | MS.gene030582:CDS | 20.0% |
| !! | ATTTAGAAATAGAAAAGGTA+AGG | - | chr4.2:8620555-8620574 | MS.gene030582:intron | 20.0% |
| !! | GAATTAAACAAATAACATCA+TGG | + | chr4.2:8618418-8618437 | None:intergenic | 20.0% |
| !! | GATAGATTTAGAAATAGAAA+AGG | - | chr4.2:8620550-8620569 | MS.gene030582:intron | 20.0% |
| !! | TAGAAGAAAATGTAAGAAAT+AGG | - | chr4.2:8618878-8618897 | MS.gene030582:intron | 20.0% |
| !! | TATTTAATTGCATCTAATAG+CGG | - | chr4.2:8617303-8617322 | MS.gene030582:intron | 20.0% |
| !! | TCTACATATGATACTTATTT+GGG | - | chr4.2:8620878-8620897 | MS.gene030582:CDS | 20.0% |
| !!! | AAATTCCATTCAATTTTCAA+TGG | - | chr4.2:8617429-8617448 | MS.gene030582:CDS | 20.0% |
| !!! | ATATATCACATTTTACCAAA+GGG | + | chr4.2:8619156-8619175 | None:intergenic | 20.0% |
| !!! | ATTTTCTTCTATACAATTCT+AGG | + | chr4.2:8618869-8618888 | None:intergenic | 20.0% |
| !!! | TTATATTTTCATAAAGCACT+TGG | - | chr4.2:8621020-8621039 | MS.gene030582:CDS | 20.0% |
| !!! | TTTGAATTGTAATTTTGTTG+TGG | - | chr4.2:8621170-8621189 | MS.gene030582:intron | 20.0% |
| !!! | TTTTAACAACTACAATCATT+AGG | + | chr4.2:8618309-8618328 | None:intergenic | 20.0% |
| !!! | TTTTTTCATGAACCATAAAA+CGG | + | chr4.2:8619698-8619717 | None:intergenic | 20.0% |
| ! | AAAAGGTCTATTGTTAAGTT+TGG | - | chr4.2:8617250-8617269 | MS.gene030582:intron | 25.0% |
| ! | AAACATAACTTCTAATGTCT+AGG | - | chr4.2:8620016-8620035 | MS.gene030582:intron | 25.0% |
| ! | AAAGCAAAACAAATAAAAGC+TGG | + | chr4.2:8618246-8618265 | None:intergenic | 25.0% |
| ! | AAATCTGTACAATGTAAACA+TGG | + | chr4.2:8618068-8618087 | None:intergenic | 25.0% |
| ! | AACTAGGTACACAAATAATA+TGG | + | chr4.2:8619919-8619938 | None:intergenic | 25.0% |
| ! | AACTTAGAAGAAAAATCACA+TGG | - | chr4.2:8620840-8620859 | MS.gene030582:CDS | 25.0% |
| ! | AATAGTGTGTGTTGAAATTT+GGG | - | chr4.2:8618017-8618036 | MS.gene030582:intron | 25.0% |
| ! | AATCAAGATAATGAAATCAG+GGG | + | chr4.2:8617834-8617853 | None:intergenic | 25.0% |
| ! | AGACATTAGAAGTTATGTTT+AGG | + | chr4.2:8620016-8620035 | None:intergenic | 25.0% |
| ! | ATACCAAATAATCACTAAGA+TGG | + | chr4.2:8621226-8621245 | None:intergenic | 25.0% |
| ! | ATACCATCTTAGTGATTATT+TGG | - | chr4.2:8621220-8621239 | MS.gene030582:CDS | 25.0% |
| ! | ATCAACAATTTCATCATCAT+CGG | + | chr4.2:8617176-8617195 | None:intergenic | 25.0% |
| ! | ATCTACTTTAATAGTGCTAT+CGG | - | chr4.2:8617741-8617760 | MS.gene030582:intron | 25.0% |
| ! | ATGAGAATAGCATCAAAATA+TGG | + | chr4.2:8620324-8620343 | None:intergenic | 25.0% |
| ! | CAAATCAAGATAATGAAATC+AGG | + | chr4.2:8617836-8617855 | None:intergenic | 25.0% |
| ! | CAATTCCATTGAAAATTGAA+TGG | + | chr4.2:8617437-8617456 | None:intergenic | 25.0% |
| ! | CAGATTAGATAACCTTATAT+TGG | - | chr4.2:8618134-8618153 | MS.gene030582:intron | 25.0% |
| ! | CTATAACATGATACATCAAT+AGG | - | chr4.2:8620792-8620811 | MS.gene030582:intron | 25.0% |
| ! | CTTTGGTAAAATGTGATATA+TGG | - | chr4.2:8619155-8619174 | MS.gene030582:intron | 25.0% |
| ! | GAAGATAATTGAGATATTTG+AGG | - | chr4.2:8617490-8617509 | MS.gene030582:CDS | 25.0% |
| ! | TAAAAATCTCATGTCCATAT+TGG | - | chr4.2:8618386-8618405 | MS.gene030582:intron | 25.0% |
| ! | TAATCTGTATAATGCAAACA+TGG | + | chr4.2:8618121-8618140 | None:intergenic | 25.0% |
| ! | TAGATATAGCTTCCAATATA+AGG | + | chr4.2:8618149-8618168 | None:intergenic | 25.0% |
| ! | TATTGTATGTATGCATTAGA+TGG | + | chr4.2:8619524-8619543 | None:intergenic | 25.0% |
| !! | AACTTAACAATAGACCTTTT+TGG | + | chr4.2:8617250-8617269 | None:intergenic | 25.0% |
| !! | ATTTTGTATTAAACCGTGAA+TGG | + | chr4.2:8617364-8617383 | None:intergenic | 25.0% |
| !! | CATATATCACATTTTACCAA+AGG | + | chr4.2:8619157-8619176 | None:intergenic | 25.0% |
| !! | CATTCAATTTTCAATGGAAT+TGG | - | chr4.2:8617435-8617454 | MS.gene030582:CDS | 25.0% |
| !! | GTATTTCTATCAAATAGATG+TGG | - | chr4.2:8621242-8621261 | MS.gene030582:CDS | 25.0% |
| !! | TTCATCACTTTGTATTTTGT+AGG | - | chr4.2:8619379-8619398 | MS.gene030582:intron | 25.0% |
| !! | TTTCAAATGTGATTTTGTTG+CGG | - | chr4.2:8620991-8621010 | MS.gene030582:CDS | 25.0% |
| !! | TTTGATGCTATTCTCATTTT+TGG | - | chr4.2:8620327-8620346 | MS.gene030582:intron | 25.0% |
| !! | TTTTACAACTCTACATTTTC+TGG | - | chr4.2:8620214-8620233 | MS.gene030582:intron | 25.0% |
| !!! | AATTGTAATTTTGTTGTGGA+GGG | - | chr4.2:8621174-8621193 | MS.gene030582:CDS | 25.0% |
| !!! | AGATATTCTAAAACACTGTA+TGG | + | chr4.2:8618366-8618385 | None:intergenic | 25.0% |
| !!! | TTGCTTTGATTTTTCTAAGT+CGG | - | chr4.2:8618977-8618996 | MS.gene030582:intron | 25.0% |
| AAAAAACTCAAGGCTCATAT+TGG | - | chr4.2:8619978-8619997 | MS.gene030582:intron | 30.0% | |
| AAAATGGCGTACAATAATCA+AGG | - | chr4.2:8616832-8616851 | MS.gene030582:intron | 30.0% | |
| AAAATTTCGCTTTGCTACAA+TGG | + | chr4.2:8617641-8617660 | None:intergenic | 30.0% | |
| AAATCTATCTCAGACTTTGT+AGG | + | chr4.2:8620539-8620558 | None:intergenic | 30.0% | |
| AAATCTCTATGAAATTGGAC+AGG | - | chr4.2:8620498-8620517 | MS.gene030582:intron | 30.0% | |
| AACAAGACACGATTAAATTC+AGG | + | chr4.2:8616860-8616879 | None:intergenic | 30.0% | |
| AACTATTGCTTCTTTCATAG+AGG | - | chr4.2:8618200-8618219 | MS.gene030582:intron | 30.0% | |
| AATCTATCTCAGACTTTGTA+GGG | + | chr4.2:8620538-8620557 | None:intergenic | 30.0% | |
| AATCTCTATGAAATTGGACA+GGG | - | chr4.2:8620499-8620518 | MS.gene030582:intron | 30.0% | |
| ACCATTAGATCCACATTTAA+CGG | + | chr4.2:8616993-8617012 | None:intergenic | 30.0% | |
| ATAGTGTGTGTTGAAATTTG+GGG | - | chr4.2:8618018-8618037 | MS.gene030582:intron | 30.0% | |
| CAAATTTCAACACACACTAT+TGG | + | chr4.2:8618018-8618037 | None:intergenic | 30.0% | |
| CAATAGTGTGTGTTGAAATT+TGG | - | chr4.2:8618016-8618035 | MS.gene030582:intron | 30.0% | |
| CAATTAGAGATCTTACTCAT+GGG | - | chr4.2:8620369-8620388 | MS.gene030582:intron | 30.0% | |
| GAGTGTTATAGCATTACATT+TGG | - | chr4.2:8619255-8619274 | MS.gene030582:intron | 30.0% | |
| GCAGAAAATCTCTATGAAAT+TGG | - | chr4.2:8620493-8620512 | MS.gene030582:intron | 30.0% | |
| GGTGTAATAGAAAAAACTCA+AGG | - | chr4.2:8619968-8619987 | MS.gene030582:intron | 30.0% | |
| GTTATAGCATTACATTTGGT+TGG | - | chr4.2:8619259-8619278 | MS.gene030582:intron | 30.0% | |
| TAAATGTGGATCTAATGGTT+TGG | - | chr4.2:8616994-8617013 | MS.gene030582:intron | 30.0% | |
| TCAATTAGAGATCTTACTCA+TGG | - | chr4.2:8620368-8620387 | MS.gene030582:intron | 30.0% | |
| TCAATTATCTTCCACTTTCA+GGG | + | chr4.2:8617482-8617501 | None:intergenic | 30.0% | |
| ! | ACTGGTTAGTATTTTGTATG+AGG | - | chr4.2:8618638-8618657 | MS.gene030582:CDS | 30.0% |
| ! | ATTTTCAATGGAATTGGATC+CGG | - | chr4.2:8617441-8617460 | MS.gene030582:CDS | 30.0% |
| ! | CTAAAGTATCTTACATCTAG+CGG | - | chr4.2:8619449-8619468 | MS.gene030582:intron | 30.0% |
| ! | CTGGTTAGTATTTTGTATGA+GGG | - | chr4.2:8618639-8618658 | MS.gene030582:CDS | 30.0% |
| !! | CAATTCTAGGACTATAAACA+AGG | + | chr4.2:8618856-8618875 | None:intergenic | 30.0% |
| !! | GAATTGTAATTTTGTTGTGG+AGG | - | chr4.2:8621173-8621192 | MS.gene030582:CDS | 30.0% |
| !! | GAGTTGATATTAGTACAAAG+AGG | - | chr4.2:8618445-8618464 | MS.gene030582:intron | 30.0% |
| !! | TGCTTTGATTTTTCTAAGTC+GGG | - | chr4.2:8618978-8618997 | MS.gene030582:intron | 30.0% |
| !! | TGGGTTGAGTTTTATATTTC+AGG | - | chr4.2:8620388-8620407 | MS.gene030582:intron | 30.0% |
| !!! | ACTGTTGTTTTTACCATTCA+CGG | - | chr4.2:8617348-8617367 | MS.gene030582:CDS | 30.0% |
| !!! | AGTTTGGCCCATATTTTTTT+TGG | - | chr4.2:8617266-8617285 | MS.gene030582:intron | 30.0% |
| !!! | CAGTTTTTTGCTAAAAGATG+AGG | - | chr4.2:8617580-8617599 | MS.gene030582:CDS | 30.0% |
| AACATGGTTAAGCATACTGT+TGG | + | chr4.2:8618052-8618071 | None:intergenic | 35.0% | |
| AAGACCCATTTCCAAAATGT+GGG | - | chr4.2:8618543-8618562 | MS.gene030582:intron | 35.0% | |
| AAGATGGTATAGAATGTCTC+CGG | + | chr4.2:8621210-8621229 | None:intergenic | 35.0% | |
| AAGGGTTTGTCTACTTTGTA+AGG | + | chr4.2:8620090-8620109 | None:intergenic | 35.0% | |
| AATCAAAAGGGTGAATCATC+CGG | - | chr4.2:8617099-8617118 | MS.gene030582:intron | 35.0% | |
| ACAATTTCATCATCATCGGA+TGG | + | chr4.2:8617172-8617191 | None:intergenic | 35.0% | |
| ACCGTTAAATGTGGATCTAA+TGG | - | chr4.2:8616989-8617008 | MS.gene030582:intron | 35.0% | |
| AGCAAAAAACTGTTCCATGA+TGG | + | chr4.2:8617572-8617591 | None:intergenic | 35.0% | |
| AGTCTCTTCGGATAGAAATA+AGG | - | chr4.2:8619773-8619792 | MS.gene030582:intron | 35.0% | |
| ATAGAGTTGTCATCCTGTTT+CGG | + | chr4.2:8617127-8617146 | None:intergenic | 35.0% | |
| ATCAGGACCAAAAAGACAAA+AGG | - | chr4.2:8619858-8619877 | MS.gene030582:CDS | 35.0% | |
| ATCTTTACCATGTACTGCTT+AGG | - | chr4.2:8620155-8620174 | MS.gene030582:intron | 35.0% | |
| ATGGAGAAATTTGAGTGTGA+CGG | - | chr4.2:8617039-8617058 | MS.gene030582:intron | 35.0% | |
| CACCCATGTTATTATTGGAA+GGG | - | chr4.2:8620468-8620487 | MS.gene030582:intron | 35.0% | |
| CATCATGGAATATGCCAATA+TGG | + | chr4.2:8618403-8618422 | None:intergenic | 35.0% | |
| CGGCTATTGTCTTTCAATTA+GGG | - | chr4.2:8617761-8617780 | MS.gene030582:intron | 35.0% | |
| CTAACCAGTATTTGTACTAG+AGG | + | chr4.2:8618627-8618646 | None:intergenic | 35.0% | |
| CTCAATTATCTTCCACTTTC+AGG | + | chr4.2:8617483-8617502 | None:intergenic | 35.0% | |
| CTCCCTTCCAATAATAACAT+GGG | + | chr4.2:8620473-8620492 | None:intergenic | 35.0% | |
| CTTCATCAAACCAACTTCTA+CGG | + | chr4.2:8619834-8619853 | None:intergenic | 35.0% | |
| CTTCCAATAATAACATGGGT+GGG | + | chr4.2:8620469-8620488 | None:intergenic | 35.0% | |
| GAAATGGGTCTTACATAAAG+TGG | + | chr4.2:8618535-8618554 | None:intergenic | 35.0% | |
| GAGTGTTATAGCATCACATT+TGG | - | chr4.2:8619292-8619311 | MS.gene030582:intron | 35.0% | |
| GATGTTCTATTCTGCAAACA+AGG | + | chr4.2:8617724-8617743 | None:intergenic | 35.0% | |
| GGATATCCCATTTATAGTAG+AGG | - | chr4.2:8619619-8619638 | MS.gene030582:intron | 35.0% | |
| GGCTATTGTCTTTCAATTAG+GGG | - | chr4.2:8617762-8617781 | MS.gene030582:intron | 35.0% | |
| GGGAAAAATCAAAGTCTCTT+CGG | - | chr4.2:8619761-8619780 | MS.gene030582:intron | 35.0% | |
| GTTATAGCATCACATTTGGT+TGG | - | chr4.2:8619296-8619315 | MS.gene030582:intron | 35.0% | |
| TAAGACCCATTTCCAAAATG+TGG | - | chr4.2:8618542-8618561 | MS.gene030582:intron | 35.0% | |
| TAATGTTGGACCGTTAAATG+TGG | - | chr4.2:8616980-8616999 | MS.gene030582:intron | 35.0% | |
| TCAGGACCAAAAAGACAAAA+GGG | - | chr4.2:8619859-8619878 | MS.gene030582:CDS | 35.0% | |
| TCATTCGATGAAATCCATGT+GGG | - | chr4.2:8618504-8618523 | MS.gene030582:intron | 35.0% | |
| TCGGCTATTGTCTTTCAATT+AGG | - | chr4.2:8617760-8617779 | MS.gene030582:intron | 35.0% | |
| TCTATCCTAGACACATGAAT+GGG | - | chr4.2:8619890-8619909 | MS.gene030582:CDS | 35.0% | |
| TCTCTCTTATTAGGTGAAAC+CGG | + | chr4.2:8618576-8618595 | None:intergenic | 35.0% | |
| TGGTTTGATGAAGTTGAATC+AGG | - | chr4.2:8619841-8619860 | MS.gene030582:intron | 35.0% | |
| TGTCTACTTTGTAAGGTTTG+AGG | + | chr4.2:8620083-8620102 | None:intergenic | 35.0% | |
| TTCCAACACTCTCTCTTATT+AGG | + | chr4.2:8618585-8618604 | None:intergenic | 35.0% | |
| TTGCAAATTATCCCTGAAAG+TGG | - | chr4.2:8617468-8617487 | MS.gene030582:CDS | 35.0% | |
| ! | AAAATAGCTCTGCTTCATGA+TGG | + | chr4.2:8619005-8619024 | None:intergenic | 35.0% |
| ! | AAATGTGATTTTGTTGCGGA+GGG | - | chr4.2:8620995-8621014 | MS.gene030582:CDS | 35.0% |
| ! | AGGGATAATTTGCAAAACTC+CGG | + | chr4.2:8617463-8617482 | None:intergenic | 35.0% |
| ! | ATATCTAGCTTGAATGAGCT+TGG | - | chr4.2:8618162-8618181 | MS.gene030582:intron | 35.0% |
| ! | CTAATGCCCTTTTGTCTTTT+TGG | + | chr4.2:8619868-8619887 | None:intergenic | 35.0% |
| ! | GATTTGCTTGCATTCTATAG+AGG | - | chr4.2:8617850-8617869 | MS.gene030582:intron | 35.0% |
| ! | GTATTTTGTAGGACCAATAC+CGG | - | chr4.2:8619390-8619409 | MS.gene030582:intron | 35.0% |
| ! | TCTAGGACTATAAACAAGGA+TGG | + | chr4.2:8618852-8618871 | None:intergenic | 35.0% |
| ! | TGTGGTTTGGATAGGATAAA+TGG | - | chr4.2:8617020-8617039 | MS.gene030582:intron | 35.0% |
| ! | TTATATTTCAGGTGAAACGC+AGG | - | chr4.2:8620399-8620418 | MS.gene030582:intron | 35.0% |
| ! | TTTGGTTATGTGGTTTGGAT+AGG | - | chr4.2:8617012-8617031 | MS.gene030582:intron | 35.0% |
| !! | AAGACGTAGTGGATTAGTAT+TGG | - | chr4.2:8619740-8619759 | MS.gene030582:intron | 35.0% |
| !! | AATGGTTTGGTTATGTGGTT+TGG | - | chr4.2:8617007-8617026 | MS.gene030582:intron | 35.0% |
| !! | AGACGTAGTGGATTAGTATT+GGG | - | chr4.2:8619741-8619760 | MS.gene030582:intron | 35.0% |
| !! | GATCTAATGGTTTGGTTATG+TGG | - | chr4.2:8617002-8617021 | MS.gene030582:intron | 35.0% |
| !! | GCAGAGCTATTTTCATAATG+AGG | - | chr4.2:8619012-8619031 | MS.gene030582:intron | 35.0% |
| !! | GCTCATATTGGTGTTAGATA+AGG | - | chr4.2:8619990-8620009 | MS.gene030582:intron | 35.0% |
| !! | GCTTTGATTTTTCTAAGTCG+GGG | - | chr4.2:8618979-8618998 | MS.gene030582:intron | 35.0% |
| !! | TCATTTACTCTAAGACGTAG+TGG | - | chr4.2:8619729-8619748 | MS.gene030582:intron | 35.0% |
| !!! | AACAACTTTTTGAAGTCTGC+CGG | + | chr4.2:8619419-8619438 | None:intergenic | 35.0% |
| AACCACAAGTCACATTAACC+AGG | + | chr4.2:8619084-8619103 | None:intergenic | 40.0% | |
| AACCTGGTTAATGTGACTTG+TGG | - | chr4.2:8619079-8619098 | MS.gene030582:intron | 40.0% | |
| ACACCCACCCATGTTATTAT+TGG | - | chr4.2:8620463-8620482 | MS.gene030582:intron | 40.0% | |
| AGCTGCAATGAAAACACTGA+AGG | - | chr4.2:8620718-8620737 | MS.gene030582:intron | 40.0% | |
| AGGTCAGCCTCTACTATAAA+TGG | + | chr4.2:8619629-8619648 | None:intergenic | 40.0% | |
| AGTCTAAGGGAGCAATCAAA+AGG | - | chr4.2:8617086-8617105 | MS.gene030582:intron | 40.0% | |
| ATCTAGCGGAAAACTGATCA+AGG | - | chr4.2:8619463-8619482 | MS.gene030582:intron | 40.0% | |
| ATGTCTCTTGAGACTTGAAG+AGG | + | chr4.2:8617205-8617224 | None:intergenic | 40.0% | |
| ATTGCATCTAATAGCGGTAG+AGG | - | chr4.2:8617309-8617328 | MS.gene030582:intron | 40.0% | |
| CACATTAACCAGGTTTCAGA+AGG | + | chr4.2:8619074-8619093 | None:intergenic | 40.0% | |
| CACTCCTCTAGTACAAATAC+TGG | - | chr4.2:8618620-8618639 | MS.gene030582:CDS | 40.0% | |
| CCACCCATGTTATTATTGGA+AGG | - | chr4.2:8620467-8620486 | MS.gene030582:intron | 40.0% | |
| CCATGTTATTATTGGAAGGG+AGG | - | chr4.2:8620471-8620490 | MS.gene030582:intron | 40.0% | |
| CCTCCCTTCCAATAATAACA+TGG | + | chr4.2:8620474-8620493 | None:intergenic | 40.0% | |
| CCTTCCAATAATAACATGGG+TGG | + | chr4.2:8620470-8620489 | None:intergenic | 40.0% | |
| CTCATTCGATGAAATCCATG+TGG | - | chr4.2:8618503-8618522 | MS.gene030582:intron | 40.0% | |
| CTGCAATGAAAACACTGAAG+GGG | - | chr4.2:8620720-8620739 | MS.gene030582:intron | 40.0% | |
| GAAACAGGATGACAACTCTA+TGG | - | chr4.2:8617126-8617145 | MS.gene030582:intron | 40.0% | |
| GCTGCAATGAAAACACTGAA+GGG | - | chr4.2:8620719-8620738 | MS.gene030582:intron | 40.0% | |
| GGACTTTCACTTTACCATCA+TGG | - | chr4.2:8617555-8617574 | MS.gene030582:CDS | 40.0% | |
| GGATAGAAATAAGGCCTAAG+TGG | - | chr4.2:8619782-8619801 | MS.gene030582:intron | 40.0% | |
| GGTCAGCCTCTACTATAAAT+GGG | + | chr4.2:8619628-8619647 | None:intergenic | 40.0% | |
| GTACCTAGTTCAGTAGTGTT+GGG | - | chr4.2:8619929-8619948 | MS.gene030582:intron | 40.0% | |
| GTCTAAGGGAGCAATCAAAA+GGG | - | chr4.2:8617087-8617106 | MS.gene030582:intron | 40.0% | |
| GTCTATCCTAGACACATGAA+TGG | - | chr4.2:8619889-8619908 | MS.gene030582:CDS | 40.0% | |
| GTCTATGACCTCCATATCAT+TGG | + | chr4.2:8618694-8618713 | None:intergenic | 40.0% | |
| GTTTACATCCCCTATCCTTT+GGG | - | chr4.2:8619651-8619670 | MS.gene030582:intron | 40.0% | |
| TAAGGTGGCTACCAATGATA+TGG | - | chr4.2:8618680-8618699 | MS.gene030582:intron | 40.0% | |
| TCCATATAACCTGCTTGTGA+GGG | - | chr4.2:8620927-8620946 | MS.gene030582:CDS | 40.0% | |
| TCTGATGTCCATTTCTGCTT+AGG | + | chr4.2:8616767-8616786 | None:intergenic | 40.0% | |
| TGGAGAAATTTGAGTGTGAC+GGG | - | chr4.2:8617040-8617059 | MS.gene030582:intron | 40.0% | |
| TGTACCTAGTTCAGTAGTGT+TGG | - | chr4.2:8619928-8619947 | MS.gene030582:intron | 40.0% | |
| TGTGGAGGGATTTATCATTC+CGG | - | chr4.2:8621188-8621207 | MS.gene030582:CDS | 40.0% | |
| TGTTTACATCCCCTATCCTT+TGG | - | chr4.2:8619650-8619669 | MS.gene030582:intron | 40.0% | |
| TTCCATATAACCTGCTTGTG+AGG | - | chr4.2:8620926-8620945 | MS.gene030582:CDS | 40.0% | |
| TTCCTCTGTCTGAATATGCA+GGG | + | chr4.2:8620442-8620461 | None:intergenic | 40.0% | |
| TTGCATCTAATAGCGGTAGA+GGG | - | chr4.2:8617310-8617329 | MS.gene030582:intron | 40.0% | |
| TTGCTACAATGGTAAACTGC+TGG | + | chr4.2:8617630-8617649 | None:intergenic | 40.0% | |
| ! | AATTTGAGTGTGACGGGAAA+TGG | - | chr4.2:8617046-8617065 | MS.gene030582:intron | 40.0% |
| ! | ACAATAGACCTTTTTGGACC+AGG | + | chr4.2:8617244-8617263 | None:intergenic | 40.0% |
| ! | CAAATGTGATTTTGTTGCGG+AGG | - | chr4.2:8620994-8621013 | MS.gene030582:CDS | 40.0% |
| ! | CACCTAATAAGAGAGAGTGT+TGG | - | chr4.2:8618580-8618599 | MS.gene030582:intron | 40.0% |
| ! | TTTTGTCCAATCACCAGTGT+GGG | - | chr4.2:8619591-8619610 | MS.gene030582:intron | 40.0% |
| ! | TTTTTGTCCAATCACCAGTG+TGG | - | chr4.2:8619590-8619609 | MS.gene030582:intron | 40.0% |
| !! | ATTTGTACTAGAGGAGTGCT+AGG | + | chr4.2:8618618-8618637 | None:intergenic | 40.0% |
| !! | CAACTCTACATTTTCTGGTG+TGG | - | chr4.2:8620219-8620238 | MS.gene030582:intron | 40.0% |
| !! | GGATCCCACATTTTGGAAAT+GGG | + | chr4.2:8618550-8618569 | None:intergenic | 40.0% |
| !! | TGGATCCCACATTTTGGAAA+TGG | + | chr4.2:8618551-8618570 | None:intergenic | 40.0% |
| !!! | TTCTCTACAGTGCCGTTTTA+TGG | - | chr4.2:8619683-8619702 | MS.gene030582:intron | 40.0% |
| AAAGTGAAAGTCCCACCTTG+TGG | + | chr4.2:8617548-8617567 | None:intergenic | 45.0% | |
| AAGTGGAGCTTGTAAAGCCT+GGG | - | chr4.2:8619799-8619818 | MS.gene030582:intron | 45.0% | |
| ACACCCAACACTACTGAACT+AGG | + | chr4.2:8619935-8619954 | None:intergenic | 45.0% | |
| AGCTGTACCTAAGCAGTACA+TGG | + | chr4.2:8620165-8620184 | None:intergenic | 45.0% | |
| AGGATAGGGGATGTAAACAC+AGG | + | chr4.2:8619649-8619668 | None:intergenic | 45.0% | |
| AGGCTTTACAAGCTCCACTT+AGG | + | chr4.2:8619799-8619818 | None:intergenic | 45.0% | |
| AGGGACATTCGAAACAGCTA+AGG | + | chr4.2:8619137-8619156 | None:intergenic | 45.0% | |
| ATAAAGTGGTGAGACCCACA+TGG | + | chr4.2:8618521-8618540 | None:intergenic | 45.0% | |
| ATCATCGGATGGACCAGTAA+CGG | + | chr4.2:8617161-8617180 | None:intergenic | 45.0% | |
| ATTTATTACTCCAGCGCACG+AGG | + | chr4.2:8618794-8618813 | None:intergenic | 45.0% | |
| CAATGTGACTACCATCGCTT+CGG | - | chr4.2:8617516-8617535 | MS.gene030582:CDS | 45.0% | |
| CTTATTAGGTGAAACCGGTG+TGG | + | chr4.2:8618571-8618590 | None:intergenic | 45.0% | |
| CTTCCTCTGTCTGAATATGC+AGG | + | chr4.2:8620443-8620462 | None:intergenic | 45.0% | |
| GCAGAAATGGACATCAGAAG+AGG | - | chr4.2:8616769-8616788 | MS.gene030582:intron | 45.0% | |
| GTGTGTGTTGAAATTTGGGG+CGG | - | chr4.2:8618021-8618040 | MS.gene030582:intron | 45.0% | |
| TAACCAGGTTTCAGAAGGCA+TGG | + | chr4.2:8619069-8619088 | None:intergenic | 45.0% | |
| TAAGTGGAGCTTGTAAAGCC+TGG | - | chr4.2:8619798-8619817 | MS.gene030582:intron | 45.0% | |
| TCAAACCAACTTCTACGGTG+AGG | + | chr4.2:8619829-8619848 | None:intergenic | 45.0% | |
| TCCTCTGTCTGAATATGCAG+GGG | + | chr4.2:8620441-8620460 | None:intergenic | 45.0% | |
| TCGCTCAAATGTCGATCTCA+AGG | - | chr4.2:8616883-8616902 | MS.gene030582:intron | 45.0% | |
| TCTTGAGACTTGAAGAGGCT+GGG | + | chr4.2:8617200-8617219 | None:intergenic | 45.0% | |
| TTCAGGTGAAACGCAGGTAT+AGG | - | chr4.2:8620405-8620424 | MS.gene030582:intron | 45.0% | |
| TTGTCATCCTGTTTCGGTAC+CGG | + | chr4.2:8617121-8617140 | None:intergenic | 45.0% | |
| ! | AGCTGTTTCGAATGTCCCTT+TGG | - | chr4.2:8619138-8619157 | MS.gene030582:intron | 45.0% |
| ! | ATTTTGTATGAGGGAGAGCC+TGG | - | chr4.2:8618648-8618667 | MS.gene030582:CDS | 45.0% |
| ! | TCTAGCTTGAATGAGCTTGG+TGG | - | chr4.2:8618165-8618184 | MS.gene030582:intron | 45.0% |
| ! | TGACTTGTGGTTTCTGTGAG+TGG | - | chr4.2:8619092-8619111 | MS.gene030582:intron | 45.0% |
| ! | TTTTGTATGAGGGAGAGCCT+GGG | - | chr4.2:8618649-8618668 | MS.gene030582:CDS | 45.0% |
| !!! | AACTTTTTGAAGTCTGCCGG+TGG | + | chr4.2:8619416-8619435 | None:intergenic | 45.0% |
| !! | AAAAACAAATAAAATAAAAA+TGG | + | chr4.2:8621087-8621106 | None:intergenic | 5.0% |
| AAAGCTGGAGTTGCCAAGCA+TGG | - | chr4.2:8616803-8616822 | MS.gene030582:intron | 50.0% | |
| AACCCACTCCCAAAGGATAG+GGG | + | chr4.2:8619662-8619681 | None:intergenic | 50.0% | |
| AAGCTGGAGTTGCCAAGCAT+GGG | - | chr4.2:8616804-8616823 | MS.gene030582:intron | 50.0% | |
| AAGGTCCATGTCTGCTCAAG+AGG | - | chr4.2:8620574-8620593 | MS.gene030582:intron | 50.0% | |
| ACCCCTGCATATTCAGACAG+AGG | - | chr4.2:8620437-8620456 | MS.gene030582:intron | 50.0% | |
| AGAACCCACTCCCAAAGGAT+AGG | + | chr4.2:8619664-8619683 | None:intergenic | 50.0% | |
| AGAAGCTGAAGAGGCAGCAA+AGG | - | chr4.2:8620646-8620665 | MS.gene030582:intron | 50.0% | |
| AGAGAAGAACCCACTCCCAA+AGG | + | chr4.2:8619669-8619688 | None:intergenic | 50.0% | |
| AGCTCCAGGGAGAAGTCTAA+GGG | - | chr4.2:8617073-8617092 | MS.gene030582:intron | 50.0% | |
| ATGGCTATCACTGCCGTTAC+TGG | - | chr4.2:8617145-8617164 | MS.gene030582:intron | 50.0% | |
| CAAGCAGAGAGGCTGTTACA+AGG | + | chr4.2:8618723-8618742 | None:intergenic | 50.0% | |
| CCAAAATGTGGGATCCACAC+CGG | - | chr4.2:8618554-8618573 | MS.gene030582:intron | 50.0% | |
| CCAAACACAACCCGACAAAG+CGG | + | chr4.2:8620060-8620079 | None:intergenic | 50.0% | |
| CTCTTCAGCTTCTGCTATGG+CGG | + | chr4.2:8620639-8620658 | None:intergenic | 50.0% | |
| CTCTTGAGACTTGAAGAGGC+TGG | + | chr4.2:8617201-8617220 | None:intergenic | 50.0% | |
| CTGTCTGAATATGCAGGGGT+AGG | + | chr4.2:8620437-8620456 | None:intergenic | 50.0% | |
| GAACCCACTCCCAAAGGATA+GGG | + | chr4.2:8619663-8619682 | None:intergenic | 50.0% | |
| GAGGAAGCAGCTCTTAAAGC+TGG | - | chr4.2:8616788-8616807 | MS.gene030582:intron | 50.0% | |
| GCAATCCTCACCGTAGAAGT+TGG | - | chr4.2:8619821-8619840 | MS.gene030582:intron | 50.0% | |
| GCCCTCACAAGCAGGTTATA+TGG | + | chr4.2:8620931-8620950 | None:intergenic | 50.0% | |
| GGTGACCCATTCATGTGTCT+AGG | + | chr4.2:8619898-8619917 | None:intergenic | 50.0% | |
| GGTGGCTACCAATGATATGG+AGG | - | chr4.2:8618683-8618702 | MS.gene030582:intron | 50.0% | |
| TACTGCTTAGGTACAGCTGC+TGG | - | chr4.2:8620167-8620186 | MS.gene030582:intron | 50.0% | |
| TGCCTCTTCAGCTTCTGCTA+TGG | + | chr4.2:8620642-8620661 | None:intergenic | 50.0% | |
| TGCTTTATGCCCTCACAAGC+AGG | + | chr4.2:8621118-8621137 | None:intergenic | 50.0% | |
| TGGGTGCTCCTAAGCAGAAA+TGG | - | chr4.2:8616756-8616775 | MS.gene030582:intron | 50.0% | |
| TGTAACAGCCTCTCTGCTTG+CGG | - | chr4.2:8618723-8618742 | MS.gene030582:intron | 50.0% | |
| TTCCTGGTCCTGGTCCAAAA+AGG | - | chr4.2:8617233-8617252 | MS.gene030582:intron | 50.0% | |
| ! | AACCTGCTTGTGAGGGCATA+AGG | - | chr4.2:8620934-8620953 | MS.gene030582:CDS | 50.0% |
| ! | ACCTTTCAAGCCGCTTTGTC+GGG | - | chr4.2:8620047-8620066 | MS.gene030582:intron | 50.0% |
| ! | ATCCCCTATCCTTTGGGAGT+GGG | - | chr4.2:8619657-8619676 | MS.gene030582:intron | 50.0% |
| ! | CACCTTTCAAGCCGCTTTGT+CGG | - | chr4.2:8620046-8620065 | MS.gene030582:intron | 50.0% |
| ! | GAATCATCCGGTACCGAAAC+AGG | - | chr4.2:8617111-8617130 | MS.gene030582:intron | 50.0% |
| ! | GTTCAGTAGTGTTGGGTGTG+AGG | - | chr4.2:8619936-8619955 | MS.gene030582:intron | 50.0% |
| ! | TTAGGTACAGCTGCTGGTTG+TGG | - | chr4.2:8620173-8620192 | MS.gene030582:intron | 50.0% |
| !! | ACTCCATGCCTTCTGAAACC+TGG | - | chr4.2:8619063-8619082 | MS.gene030582:intron | 50.0% |
| AAAGTCCCACCTTGTGGCGT+TGG | + | chr4.2:8617542-8617561 | None:intergenic | 55.0% | |
| ACCCGACAAAGCGGCTTGAA+AGG | + | chr4.2:8620051-8620070 | None:intergenic | 55.0% | |
| AGAGACATGCCGCACATTCC+TGG | - | chr4.2:8617217-8617236 | MS.gene030582:intron | 55.0% | |
| AGAGCCTGGGCACAACGTTA+AGG | - | chr4.2:8618662-8618681 | MS.gene030582:intron | 55.0% | |
| AGCTGAAGAGGCAGCAAAGG+AGG | - | chr4.2:8620649-8620668 | MS.gene030582:intron | 55.0% | |
| AGCTGGAGTTGCCAAGCATG+GGG | - | chr4.2:8616805-8616824 | MS.gene030582:intron | 55.0% | |
| AGGATCCCACGTGGGATCTA+GGG | + | chr4.2:8618774-8618793 | None:intergenic | 55.0% | |
| CAATCACCAGTGTGGGTGCA+TGG | - | chr4.2:8619598-8619617 | MS.gene030582:intron | 55.0% | |
| CATGCACCCACACTGGTGAT+TGG | + | chr4.2:8619600-8619619 | None:intergenic | 55.0% | |
| CCAAGCATGGGGTGGGAAAA+TGG | - | chr4.2:8616816-8616835 | MS.gene030582:intron | 55.0% | |
| CGCCATAGCAGAAGCTGAAG+AGG | - | chr4.2:8620637-8620656 | MS.gene030582:intron | 55.0% | |
| GACTGCTCGAGCAGCATATG+CGG | + | chr4.2:8620603-8620622 | None:intergenic | 55.0% | |
| GAGCTCCAGGGAGAAGTCTA+AGG | - | chr4.2:8617072-8617091 | MS.gene030582:intron | 55.0% | |
| GGATATCCATGCACCCACAC+TGG | + | chr4.2:8619607-8619626 | None:intergenic | 55.0% | |
| GGGAAATGGATCGAGCTCCA+GGG | - | chr4.2:8617060-8617079 | MS.gene030582:intron | 55.0% | |
| GTAACAGCCTCTCTGCTTGC+GGG | - | chr4.2:8618724-8618743 | MS.gene030582:intron | 55.0% | |
| TGCCTTATGCCCTCACAAGC+AGG | + | chr4.2:8620939-8620958 | None:intergenic | 55.0% | |
| TGCTCCCTTAGACTTCTCCC+TGG | + | chr4.2:8617080-8617099 | None:intergenic | 55.0% | |
| TTCTACGGTGAGGATTGCCC+AGG | + | chr4.2:8619819-8619838 | None:intergenic | 55.0% | |
| ! | ACAGCTGCTGGTTGTGGCTT+TGG | - | chr4.2:8620179-8620198 | MS.gene030582:intron | 55.0% |
| ! | CAGCTGCTGGTTGTGGCTTT+GGG | - | chr4.2:8620180-8620199 | MS.gene030582:intron | 55.0% |
| ! | CATCCCCTATCCTTTGGGAG+TGG | - | chr4.2:8619656-8619675 | MS.gene030582:intron | 55.0% |
| ! | CCATTTTCCCACCCCATGCT+TGG | + | chr4.2:8616819-8616838 | None:intergenic | 55.0% |
| ! | CCGCTTTGTCGGGTTGTGTT+TGG | - | chr4.2:8620057-8620076 | MS.gene030582:intron | 55.0% |
| ! | CCGGTGTGGATCCCACATTT+TGG | + | chr4.2:8618557-8618576 | None:intergenic | 55.0% |
| ! | GACCTTTTTGGACCAGGACC+AGG | + | chr4.2:8617238-8617257 | None:intergenic | 55.0% |
| !!! | TTTTGAAGTCTGCCGGTGGC+CGG | + | chr4.2:8619412-8619431 | None:intergenic | 55.0% |
| ACCCTCCCTAGATCCCACGT+GGG | - | chr4.2:8618766-8618785 | MS.gene030582:intron | 60.0% | |
| AGAGGCAGCAAAGGAGGCAG+AGG | - | chr4.2:8620655-8620674 | MS.gene030582:intron | 60.0% | |
| ATCCCACGTGGGATCTAGGG+AGG | + | chr4.2:8618771-8618790 | None:intergenic | 60.0% | |
| ATGCCGCACATTCCTGGTCC+TGG | - | chr4.2:8617223-8617242 | MS.gene030582:intron | 60.0% | |
| CCTCTCTGCTTGCGGGTGTA+AGG | - | chr4.2:8618731-8618750 | MS.gene030582:intron | 60.0% | |
| CCTTACACCCGCAAGCAGAG+AGG | + | chr4.2:8618734-8618753 | None:intergenic | 60.0% | |
| CGGGAAATGGATCGAGCTCC+AGG | - | chr4.2:8617059-8617078 | MS.gene030582:intron | 60.0% | |
| GAGGATCCCACGTGGGATCT+AGG | + | chr4.2:8618775-8618794 | None:intergenic | 60.0% | |
| GCCACCTTAACGTTGTGCCC+AGG | + | chr4.2:8618669-8618688 | None:intergenic | 60.0% | |
| GCCTGGGCACAACGTTAAGG+TGG | - | chr4.2:8618665-8618684 | MS.gene030582:intron | 60.0% | |
| GGACCAGGACCAGGAATGTG+CGG | + | chr4.2:8617229-8617248 | None:intergenic | 60.0% | |
| GGAGTTGCCAAGCATGGGGT+GGG | - | chr4.2:8616809-8616828 | MS.gene030582:intron | 60.0% | |
| GGCAGCCTCTTGAGCAGACA+TGG | + | chr4.2:8620582-8620601 | None:intergenic | 60.0% | |
| GTAGGACCAATACCGGCCAC+CGG | - | chr4.2:8619397-8619416 | MS.gene030582:intron | 60.0% | |
| TACCCTCCCTAGATCCCACG+TGG | - | chr4.2:8618765-8618784 | MS.gene030582:intron | 60.0% | |
| TCCCACGTGGGATCTAGGGA+GGG | + | chr4.2:8618770-8618789 | None:intergenic | 60.0% | |
| TGGAGTTGCCAAGCATGGGG+TGG | - | chr4.2:8616808-8616827 | MS.gene030582:intron | 60.0% | |
| TTCGGCCAACGCCACAAGGT+GGG | - | chr4.2:8617534-8617553 | MS.gene030582:CDS | 60.0% | |
| TTGGGTGTGAGGCTGTGAGC+AGG | - | chr4.2:8619947-8619966 | MS.gene030582:intron | 60.0% | |
| AGCGCACGAGGATCCCACGT+GGG | + | chr4.2:8618782-8618801 | None:intergenic | 65.0% | |
| AGTCTGCCGGTGGCCGGTAT+TGG | + | chr4.2:8619406-8619425 | None:intergenic | 65.0% | |
| CTTCGGCCAACGCCACAAGG+TGG | - | chr4.2:8617533-8617552 | MS.gene030582:CDS | 65.0% | |
| TCGCTTCGGCCAACGCCACA+AGG | - | chr4.2:8617530-8617549 | MS.gene030582:CDS | 65.0% | |
| !! | TGTGGCGTTGGCCGAAGCGA+TGG | + | chr4.2:8617530-8617549 | None:intergenic | 65.0% |
| CACGTGGGATCCTCGTGCGC+TGG | - | chr4.2:8618781-8618800 | MS.gene030582:intron | 70.0% | |
| CAGCGCACGAGGATCCCACG+TGG | + | chr4.2:8618783-8618802 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 8616755 | 8621322 | 8616755 | ID=MS.gene030582 |
| chr4.2 | mRNA | 8616755 | 8621322 | 8616755 | ID=MS.gene030582.t1;Parent=MS.gene030582 |
| chr4.2 | exon | 8621173 | 8621322 | 8621173 | ID=MS.gene030582.t1.exon1;Parent=MS.gene030582.t1 |
| chr4.2 | CDS | 8621173 | 8621322 | 8621173 | ID=cds.MS.gene030582.t1;Parent=MS.gene030582.t1 |
| chr4.2 | exon | 8620823 | 8621043 | 8620823 | ID=MS.gene030582.t1.exon2;Parent=MS.gene030582.t1 |
| chr4.2 | CDS | 8620823 | 8621043 | 8620823 | ID=cds.MS.gene030582.t1;Parent=MS.gene030582.t1 |
| chr4.2 | exon | 8619856 | 8619940 | 8619856 | ID=MS.gene030582.t1.exon3;Parent=MS.gene030582.t1 |
| chr4.2 | CDS | 8619856 | 8619940 | 8619856 | ID=cds.MS.gene030582.t1;Parent=MS.gene030582.t1 |
| chr4.2 | exon | 8618593 | 8618676 | 8618593 | ID=MS.gene030582.t1.exon4;Parent=MS.gene030582.t1 |
| chr4.2 | CDS | 8618593 | 8618676 | 8618593 | ID=cds.MS.gene030582.t1;Parent=MS.gene030582.t1 |
| chr4.2 | exon | 8617317 | 8617667 | 8617317 | ID=MS.gene030582.t1.exon5;Parent=MS.gene030582.t1 |
| chr4.2 | CDS | 8617317 | 8617667 | 8617317 | ID=cds.MS.gene030582.t1;Parent=MS.gene030582.t1 |
| chr4.2 | exon | 8616755 | 8616769 | 8616755 | ID=MS.gene030582.t1.exon6;Parent=MS.gene030582.t1 |
| chr4.2 | CDS | 8616755 | 8616769 | 8616755 | ID=cds.MS.gene030582.t1;Parent=MS.gene030582.t1 |
| Gene Sequence |
| Protein sequence |
