Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030665.t1 | AET04670.2 | 92.6 | 256 | 19 | 0 | 1 | 256 | 1 | 256 | 2.90E-124 | 454.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030665.t1 | Q8VWK4 | 47.3 | 262 | 118 | 8 | 1 | 257 | 1 | 247 | 8.2e-51 | 202.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030665.t1 | G7LCB1 | 92.6 | 256 | 19 | 0 | 1 | 256 | 1 | 256 | 2.1e-124 | 454.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene030665.t1 | TF | MYB-related |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030665.t1 | MTR_8g092810 | 95.652 | 253 | 11 | 0 | 1 | 253 | 1 | 253 | 2.19e-177 | 498 |
| MS.gene030665.t1 | MTR_2g031870 | 65.323 | 248 | 77 | 1 | 1 | 248 | 1 | 239 | 5.62e-110 | 321 |
| MS.gene030665.t1 | MTR_8g494240 | 64.800 | 250 | 73 | 4 | 1 | 248 | 1 | 237 | 2.56e-106 | 311 |
| MS.gene030665.t1 | MTR_8g494240 | 64.800 | 250 | 73 | 4 | 1 | 248 | 1 | 237 | 5.84e-106 | 311 |
| MS.gene030665.t1 | MTR_8g494240 | 64.800 | 250 | 73 | 4 | 1 | 248 | 1 | 237 | 1.13e-104 | 311 |
| MS.gene030665.t1 | MTR_8g494240 | 42.857 | 112 | 34 | 3 | 3 | 114 | 304 | 385 | 2.18e-15 | 76.3 |
| MS.gene030665.t1 | MTR_2g031870 | 56.452 | 248 | 73 | 2 | 1 | 248 | 1 | 213 | 8.31e-85 | 256 |
| MS.gene030665.t1 | MTR_0095s0040 | 67.532 | 154 | 48 | 1 | 1 | 152 | 1 | 154 | 7.79e-69 | 214 |
| MS.gene030665.t1 | MTR_4g097130 | 39.015 | 264 | 132 | 5 | 1 | 248 | 1 | 251 | 1.36e-53 | 177 |
| MS.gene030665.t1 | MTR_4g097130 | 39.015 | 264 | 132 | 5 | 1 | 248 | 1 | 251 | 1.57e-53 | 177 |
| MS.gene030665.t1 | MTR_4g097130 | 37.918 | 269 | 133 | 5 | 1 | 248 | 1 | 256 | 3.19e-52 | 174 |
| MS.gene030665.t1 | MTR_5g015340 | 45.215 | 303 | 152 | 4 | 1 | 302 | 1 | 290 | 2.72e-51 | 171 |
| MS.gene030665.t1 | MTR_5g015340 | 45.215 | 303 | 152 | 4 | 1 | 302 | 1 | 290 | 2.72e-51 | 171 |
| MS.gene030665.t1 | MTR_5g015340 | 45.215 | 303 | 152 | 4 | 1 | 302 | 1 | 290 | 3.65e-50 | 171 |
| MS.gene030665.t1 | MTR_1g088180 | 51.969 | 127 | 49 | 3 | 125 | 251 | 295 | 409 | 1.68e-31 | 122 |
| MS.gene030665.t1 | MTR_8g018410 | 32.459 | 305 | 164 | 9 | 1 | 296 | 1 | 272 | 8.10e-30 | 114 |
| MS.gene030665.t1 | MTR_2g099610 | 32.877 | 219 | 102 | 5 | 1 | 187 | 1 | 206 | 2.59e-26 | 105 |
| MS.gene030665.t1 | MTR_1g041765 | 67.188 | 64 | 21 | 0 | 1 | 64 | 1 | 64 | 5.20e-25 | 99.8 |
| MS.gene030665.t1 | MTR_2g031880 | 48.624 | 109 | 48 | 2 | 60 | 168 | 2 | 102 | 1.23e-19 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030665.t1 | AT1G49950 | 46.899 | 258 | 111 | 9 | 1 | 250 | 1 | 240 | 2.56e-66 | 210 |
| MS.gene030665.t1 | AT1G49950 | 46.899 | 258 | 111 | 9 | 1 | 250 | 1 | 240 | 2.56e-66 | 210 |
| MS.gene030665.t1 | AT1G49950 | 46.899 | 258 | 111 | 9 | 1 | 250 | 1 | 240 | 2.56e-66 | 210 |
| MS.gene030665.t1 | AT5G67580 | 42.384 | 302 | 160 | 5 | 1 | 299 | 1 | 291 | 9.81e-45 | 154 |
| MS.gene030665.t1 | AT5G67580 | 42.384 | 302 | 160 | 5 | 1 | 299 | 1 | 291 | 9.81e-45 | 154 |
| MS.gene030665.t1 | AT3G49850 | 36.530 | 219 | 137 | 2 | 1 | 219 | 1 | 217 | 4.22e-40 | 142 |
| MS.gene030665.t1 | AT3G49850 | 36.530 | 219 | 137 | 2 | 1 | 219 | 1 | 217 | 4.22e-40 | 142 |
| MS.gene030665.t1 | AT1G72740 | 36.316 | 190 | 113 | 3 | 1 | 187 | 1 | 185 | 7.84e-29 | 112 |
| MS.gene030665.t1 | AT1G72740 | 36.957 | 184 | 108 | 3 | 1 | 181 | 1 | 179 | 2.38e-27 | 108 |
| MS.gene030665.t1 | AT1G17520 | 35.638 | 188 | 116 | 1 | 1 | 183 | 1 | 188 | 9.08e-25 | 101 |
| MS.gene030665.t1 | AT1G17520 | 34.737 | 190 | 119 | 1 | 1 | 185 | 1 | 190 | 3.05e-24 | 99.8 |
| MS.gene030665.t1 | AT1G17520 | 35.979 | 189 | 115 | 2 | 1 | 183 | 1 | 189 | 7.62e-24 | 99.0 |
| MS.gene030665.t1 | AT1G17520 | 35.079 | 191 | 118 | 2 | 1 | 185 | 1 | 191 | 2.41e-23 | 97.4 |
Find 73 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGATATGCTGGAAATTA+AGG | 0.140872 | 4.3:+8740095 | MS.gene030665:CDS |
| AACTATTGCTTCTTTCATTA+AGG | 0.194532 | 4.3:+8741047 | MS.gene030665:CDS |
| AAACCGACCCATGTTATTAT+TGG | 0.212298 | 4.3:+8743493 | MS.gene030665:CDS |
| ACTCTCAGCTAGCAATAAAA+AGG | 0.232134 | 4.3:+8739971 | MS.gene030665:CDS |
| TAGATATTGCTTCCACTATA+AGG | 0.286103 | 4.3:-8740993 | None:intergenic |
| TGTGGGTTGGATAGGATAAA+TGG | 0.326262 | 4.3:+8739905 | MS.gene030665:intron |
| TGAAGCATGGCGTAGGTAAA+TGG | 0.346059 | 4.3:+8739705 | MS.gene030665:CDS |
| TTCCTCTATCTGAATATGCT+TGG | 0.349369 | 4.3:-8743469 | None:intergenic |
| AAATAAGCTGTCAGCAAAAC+TGG | 0.353881 | 4.3:+8742480 | MS.gene030665:CDS |
| TCCTCTATCTGAATATGCTT+GGG | 0.366075 | 4.3:-8743468 | None:intergenic |
| GGCTGAGATAGACTTGGAAT+TGG | 0.370284 | 4.3:+8743601 | MS.gene030665:CDS |
| CTATTAAATCTGACAGGGGT+GGG | 0.403434 | 4.3:+8743534 | MS.gene030665:CDS |
| ACAGATATGCTGGAAATTAA+GGG | 0.415666 | 4.3:+8740096 | MS.gene030665:CDS |
| GAGGAAGCGGCTCTCAAAGC+TGG | 0.427705 | 4.3:+8739677 | MS.gene030665:CDS |
| ACGGAGTCGTCACGCTGTTC+TGG | 0.440395 | 4.3:-8740009 | None:intergenic |
| TATTAAATCTGACAGGGGTG+GGG | 0.448513 | 4.3:+8743535 | MS.gene030665:CDS |
| TCAAGTTAAAACAGATATGC+TGG | 0.453383 | 4.3:+8740086 | MS.gene030665:CDS |
| AATCTGCCGGTGCGCAGTAT+TGG | 0.455578 | 4.3:-8742453 | None:intergenic |
| ATTAAATCTGACAGGGGTGG+GGG | 0.463232 | 4.3:+8743536 | MS.gene030665:CDS |
| AAGCCTCTATTAAATCTGAC+AGG | 0.463302 | 4.3:+8743528 | MS.gene030665:CDS |
| AATATGAGTCTGAAGGCAAA+TGG | 0.474909 | 4.3:+8739931 | MS.gene030665:CDS |
| ACCCAAGCATATTCAGATAG+AGG | 0.477513 | 4.3:+8743467 | MS.gene030665:CDS |
| AGGCAAATGGATCATCCTCC+GGG | 0.485206 | 4.3:+8739944 | MS.gene030665:CDS |
| CGCCATGGCAGAAGCTGAAG+AGG | 0.487462 | 4.3:+8743694 | MS.gene030665:CDS |
| ACCCCTGTCAGATTTAATAG+AGG | 0.496957 | 4.3:-8743531 | None:intergenic |
| CCTCCCTTCCAATAATAACA+TGG | 0.497696 | 4.3:-8743501 | None:intergenic |
| TGCCTCTTCAGCTTCTGCCA+TGG | 0.502504 | 4.3:-8743696 | None:intergenic |
| AAGGCAAATGGATCATCCTC+CGG | 0.503120 | 4.3:+8739943 | MS.gene030665:CDS |
| CAGATTGGACAACCTTATAG+TGG | 0.503998 | 4.3:+8740981 | MS.gene030665:intron |
| CTGGTGGATCTTGTATCTAG+TGG | 0.509226 | 4.3:+8742499 | MS.gene030665:CDS |
| GTCCGGAAAGGTCTATCAAA+AGG | 0.511188 | 4.3:+8740118 | MS.gene030665:CDS |
| TATGCTGGAAATTAAGGGTC+CGG | 0.513448 | 4.3:+8740101 | MS.gene030665:CDS |
| TTATATTTCAGGTGAAACAT+AGG | 0.516350 | 4.3:+8743429 | MS.gene030665:intron |
| CGACCCATGTTATTATTGGA+AGG | 0.524027 | 4.3:+8743497 | MS.gene030665:CDS |
| ATCTAGTGGAAAACTGATCA+AGG | 0.537966 | 4.3:+8742513 | MS.gene030665:CDS |
| AAAGTCCATGTCTTTACAAG+AGG | 0.539777 | 4.3:+8743631 | MS.gene030665:CDS |
| TGCTGAAGCAGAAGCCGCCA+TGG | 0.540719 | 4.3:+8743679 | MS.gene030665:CDS |
| AGAGGCAACAAAGGAGGCAG+AGG | 0.547850 | 4.3:+8743712 | MS.gene030665:CDS |
| AGAAGCTGAAGAGGCAACAA+AGG | 0.557008 | 4.3:+8743703 | MS.gene030665:CDS |
| CCGCTCAAATATCGATCTCA+AGG | 0.560055 | 4.3:+8739772 | MS.gene030665:CDS |
| AAGAAAGGCTGAGATAGACT+TGG | 0.566957 | 4.3:+8743595 | MS.gene030665:CDS |
| CTCTTCAGCTTCTGCCATGG+CGG | 0.568303 | 4.3:-8743693 | None:intergenic |
| ATGGTCATCAGAAGAGGAAG+CGG | 0.577986 | 4.3:+8739664 | MS.gene030665:CDS |
| ACAGAAATGGTCATCAGAAG+AGG | 0.578108 | 4.3:+8739658 | MS.gene030665:CDS |
| AGCAATATCTAGCTTGAATG+AGG | 0.580943 | 4.3:+8741005 | MS.gene030665:CDS |
| GACCCATGTTATTATTGGAA+GGG | 0.581327 | 4.3:+8743498 | MS.gene030665:CDS |
| CTATCTGAATATGCTTGGGT+AGG | 0.584721 | 4.3:-8743464 | None:intergenic |
| ATGGAGAAATATGAGTCTGA+AGG | 0.599241 | 4.3:+8739924 | MS.gene030665:CDS |
| TGGGTGCTACTAGACAGAAA+TGG | 0.601772 | 4.3:+8739645 | MS.gene030665:CDS |
| AGCCTCTATTAAATCTGACA+GGG | 0.601960 | 4.3:+8743529 | MS.gene030665:CDS |
| CTTCCAATAATAACATGGGT+CGG | 0.603083 | 4.3:-8743496 | None:intergenic |
| CCATGTTATTATTGGAAGGG+AGG | 0.603196 | 4.3:+8743501 | MS.gene030665:CDS |
| GGAGTTGTGAAGCATGGCGT+AGG | 0.603718 | 4.3:+8739698 | MS.gene030665:CDS |
| TGCTAGCTGAGAGTTGTCCC+CGG | 0.606787 | 4.3:-8739962 | None:intergenic |
| CTCCCTTCCAATAATAACAT+GGG | 0.607660 | 4.3:-8743500 | None:intergenic |
| TCTATTAAATCTGACAGGGG+TGG | 0.615717 | 4.3:+8743533 | MS.gene030665:CDS |
| AAAGCTGGAGTTGTGAAGCA+TGG | 0.620365 | 4.3:+8739692 | MS.gene030665:CDS |
| AGCTGAAGAGGCAACAAAGG+AGG | 0.624067 | 4.3:+8743706 | MS.gene030665:CDS |
| TAAGCTGTCAGCAAAACTGG+TGG | 0.625095 | 4.3:+8742483 | MS.gene030665:CDS |
| AGAAGCAGAAGCTGATGCAG+CGG | 0.627843 | 4.3:+8743739 | MS.gene030665:CDS |
| TACAACACATGGTTAAACTC+AGG | 0.630999 | 4.3:-8739746 | None:intergenic |
| CCTTGAGATCGATATTTGAG+CGG | 0.641849 | 4.3:-8739772 | None:intergenic |
| TGGAAATTAAGGGTCCGGAA+AGG | 0.649175 | 4.3:+8740106 | MS.gene030665:CDS |
| TCTAGCTTGAATGAGGTCGA+TGG | 0.649394 | 4.3:+8741012 | MS.gene030665:CDS |
| GTAGAACCAATACTGCGCAC+CGG | 0.653755 | 4.3:+8742447 | MS.gene030665:intron |
| GATTACCTCTTGTAAAGACA+TGG | 0.659824 | 4.3:-8743636 | None:intergenic |
| GCCTCTATTAAATCTGACAG+GGG | 0.668262 | 4.3:+8743530 | MS.gene030665:CDS |
| TAAATGGAGTAAGATACTCA+AGG | 0.669197 | 4.3:+8739721 | MS.gene030665:CDS |
| TTGAGCGGATATACAACACA+TGG | 0.677687 | 4.3:-8739757 | None:intergenic |
| AGAACAGCGTGACGACTCCG+TGG | 0.703510 | 4.3:+8740011 | MS.gene030665:CDS |
| AGTAACGAGATTTACAGCCA+CGG | 0.703562 | 4.3:-8740028 | None:intergenic |
| TAGCTGAGAGTTGTCCCCGG+AGG | 0.710409 | 4.3:-8739959 | None:intergenic |
| GGCAAATGGATCATCCTCCG+GGG | 0.731603 | 4.3:+8739945 | MS.gene030665:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGCTTTTAAATTATTAAATT+TGG | + | chr4.3:8741107-8741126 | MS.gene030665:intron | 10.0% |
| !! | AAAAAAAAGAAAGAAAAAAG+TGG | - | chr4.3:8743084-8743103 | None:intergenic | 15.0% |
| !! | AAATTAAACAAATAACATCA+TGG | - | chr4.3:8741252-8741271 | None:intergenic | 15.0% |
| !! | AATACATTATTATGTGTAAA+GGG | - | chr4.3:8739841-8739860 | None:intergenic | 15.0% |
| !! | ACTAAACAAAACAAAAAATA+TGG | - | chr4.3:8740150-8740169 | None:intergenic | 15.0% |
| !! | ATAATGTATTGAATAAATGT+TGG | + | chr4.3:8739851-8739870 | MS.gene030665:intron | 15.0% |
| !! | CTAAACAAAACAAAAAATAT+GGG | - | chr4.3:8740149-8740168 | None:intergenic | 15.0% |
| !! | TAAACAAAACAAAAAATATG+GGG | - | chr4.3:8740148-8740167 | None:intergenic | 15.0% |
| !! | TAGTATGGTAATTTATTTAA+TGG | + | chr4.3:8740166-8740185 | MS.gene030665:intron | 15.0% |
| !! | TATAAGATGCAATTAAATAA+GGG | - | chr4.3:8740349-8740368 | None:intergenic | 15.0% |
| !! | TCAAAATGAAAAATTTATCT+TGG | + | chr4.3:8740228-8740247 | MS.gene030665:intron | 15.0% |
| !! | TTCTTCATTTATATATATCA+AGG | + | chr4.3:8741619-8741638 | MS.gene030665:intron | 15.0% |
| !!! | ATTTTGATTAGTACAAAAAT+TGG | + | chr4.3:8741268-8741287 | MS.gene030665:intron | 15.0% |
| !!! | ATTTTTTGTTTTGTTTAGTA+TGG | + | chr4.3:8740151-8740170 | MS.gene030665:intron | 15.0% |
| !!! | GTTTTTGTTCTTTATATTTT+AGG | + | chr4.3:8743297-8743316 | MS.gene030665:intron | 15.0% |
| !! | AAATAGAACTTCTAATATCT+AGG | + | chr4.3:8743040-8743059 | MS.gene030665:intron | 20.0% |
| !! | AAGGTATAATTATGATTTCT+AGG | + | chr4.3:8741066-8741085 | MS.gene030665:intron | 20.0% |
| !! | AGATATTAGAAGTTCTATTT+AGG | - | chr4.3:8743040-8743059 | None:intergenic | 20.0% |
| !! | ATATAATTTAATTGTGCTAC+CGG | + | chr4.3:8740767-8740786 | MS.gene030665:intron | 20.0% |
| !! | CAATACATTATTATGTGTAA+AGG | - | chr4.3:8739842-8739861 | None:intergenic | 20.0% |
| !! | CATAGATTATCAAAAAAGAA+AGG | + | chr4.3:8743580-8743599 | MS.gene030665:CDS | 20.0% |
| !! | CTATAAGATGCAATTAAATA+AGG | - | chr4.3:8740350-8740369 | None:intergenic | 20.0% |
| !!! | AACTTTTTAACAAATGTCTT+TGG | - | chr4.3:8740209-8740228 | None:intergenic | 20.0% |
| !!! | AATCTATGTCATACTTTTTA+GGG | - | chr4.3:8743568-8743587 | None:intergenic | 20.0% |
| !!! | ACTTTTTAACAAATGTCTTT+GGG | - | chr4.3:8740208-8740227 | None:intergenic | 20.0% |
| !!! | TAATCTATGTCATACTTTTT+AGG | - | chr4.3:8743569-8743588 | None:intergenic | 20.0% |
| !!! | TACATTTTCTAATGTTTACA+TGG | + | chr4.3:8743239-8743258 | MS.gene030665:intron | 20.0% |
| ! | AAAAATCACTAAAATCACTG+CGG | + | chr4.3:8743783-8743802 | MS.gene030665:CDS | 25.0% |
| ! | AAAGCAGAACAAATAAAAGT+TGG | - | chr4.3:8741093-8741112 | None:intergenic | 25.0% |
| ! | AACTATTGCTTCTTTCATTA+AGG | + | chr4.3:8741047-8741066 | MS.gene030665:CDS | 25.0% |
| ! | AAGCAGAACAAATAAAAGTT+GGG | - | chr4.3:8741092-8741111 | None:intergenic | 25.0% |
| ! | AGAAGAAAATGTAAGAAGTA+GGG | + | chr4.3:8741520-8741539 | MS.gene030665:intron | 25.0% |
| ! | ATAAACCAATAGGGATATTA+CGG | - | chr4.3:8740433-8740452 | None:intergenic | 25.0% |
| ! | ATTTATTGTGAGCCATATTT+GGG | + | chr4.3:8743352-8743371 | MS.gene030665:intron | 25.0% |
| ! | CAAAACAAGAGAATGAAATT+AGG | - | chr4.3:8740870-8740889 | None:intergenic | 25.0% |
| ! | CAATCTGTATAATGTAAACA+TGG | - | chr4.3:8740968-8740987 | None:intergenic | 25.0% |
| ! | CAATTAGAGATCTTACTAAT+GGG | + | chr4.3:8743399-8743418 | MS.gene030665:intron | 25.0% |
| ! | CATCAAATGATATTGAAACA+TGG | + | chr4.3:8742707-8742726 | MS.gene030665:intron | 25.0% |
| ! | CATGTTTACATTATACAGAT+TGG | + | chr4.3:8740966-8740985 | MS.gene030665:intron | 25.0% |
| ! | CTAAGTTAAGGATTCAAAAA+AGG | - | chr4.3:8740321-8740340 | None:intergenic | 25.0% |
| ! | TAGAAGAAAATGTAAGAAGT+AGG | + | chr4.3:8741519-8741538 | MS.gene030665:intron | 25.0% |
| ! | TCAATTAGAGATCTTACTAA+TGG | + | chr4.3:8743398-8743417 | MS.gene030665:intron | 25.0% |
| !! | TTATATTTCAGGTGAAACAT+AGG | + | chr4.3:8743429-8743448 | MS.gene030665:intron | 25.0% |
| !!! | AATATCCCTATTGGTTTATT+TGG | + | chr4.3:8740434-8740453 | MS.gene030665:intron | 25.0% |
| !!! | ATATCTGTTTTAACTTGAAG+AGG | - | chr4.3:8740084-8740103 | None:intergenic | 25.0% |
| !!! | ATGCTATTTCAACTTTCAAT+TGG | + | chr4.3:8742266-8742285 | MS.gene030665:intron | 25.0% |
| !!! | TTTCACAACGTATTTTTTTG+TGG | + | chr4.3:8742617-8742636 | MS.gene030665:intron | 25.0% |
| AAAATTATCTTCCACTTCCA+AGG | - | chr4.3:8740509-8740528 | None:intergenic | 30.0% | |
| AACAGATATGCTGGAAATTA+AGG | + | chr4.3:8740095-8740114 | MS.gene030665:CDS | 30.0% | |
| AAGTTCTATAGCATTCCATT+TGG | + | chr4.3:8742342-8742361 | MS.gene030665:intron | 30.0% | |
| ACAGATATGCTGGAAATTAA+GGG | + | chr4.3:8740096-8740115 | MS.gene030665:CDS | 30.0% | |
| ATATACTAAGCTTCCATTCA+TGG | - | chr4.3:8742196-8742215 | None:intergenic | 30.0% | |
| ATCAAAGCAATTATGGTGTA+CGG | - | chr4.3:8742005-8742024 | None:intergenic | 30.0% | |
| ATCTCAATGTTTGGTTATGT+GGG | + | chr4.3:8739888-8739907 | MS.gene030665:intron | 30.0% | |
| ATTGCTTACACATGAATAGA+AGG | + | chr4.3:8741642-8741661 | MS.gene030665:intron | 30.0% | |
| CATTTATTGTGAGCCATATT+TGG | + | chr4.3:8743351-8743370 | MS.gene030665:intron | 30.0% | |
| TAAATGGAGTAAGATACTCA+AGG | + | chr4.3:8739721-8739740 | MS.gene030665:CDS | 30.0% | |
| TAGATATTGCTTCCACTATA+AGG | - | chr4.3:8740996-8741015 | None:intergenic | 30.0% | |
| TATTGTATGTTTGCATGAGA+TGG | - | chr4.3:8742574-8742593 | None:intergenic | 30.0% | |
| TCAAGTTAAAACAGATATGC+TGG | + | chr4.3:8740086-8740105 | MS.gene030665:CDS | 30.0% | |
| TCAATTGGCTAAATCTTATG+TGG | + | chr4.3:8742281-8742300 | MS.gene030665:intron | 30.0% | |
| TGAGATCTTCAAAAGATATC+CGG | + | chr4.3:8740528-8740547 | MS.gene030665:intron | 30.0% | |
| TGGCAAAATCAAAGCAATTA+TGG | - | chr4.3:8742012-8742031 | None:intergenic | 30.0% | |
| TTCGACCAAATAAACCAATA+GGG | - | chr4.3:8740442-8740461 | None:intergenic | 30.0% | |
| TTTCGACCAAATAAACCAAT+AGG | - | chr4.3:8740443-8740462 | None:intergenic | 30.0% | |
| ! | AAAGAAAAAAGTGGCTTGTA+AGG | - | chr4.3:8743075-8743094 | None:intergenic | 30.0% |
| ! | GTCAAACATTTACTCTAAAG+AGG | + | chr4.3:8742841-8742860 | MS.gene030665:intron | 30.0% |
| ! | GTTTTATATTTACCGCTTCA+TGG | + | chr4.3:8742807-8742826 | MS.gene030665:intron | 30.0% |
| ! | TTTTATCCAATCACCAGTAT+CGG | + | chr4.3:8742640-8742659 | MS.gene030665:intron | 30.0% |
| !! | TAGAAAAGTATCCAACCAAA+TGG | - | chr4.3:8742360-8742379 | None:intergenic | 30.0% |
| !!! | AGCTTATTTTTGAAATCTGC+CGG | - | chr4.3:8742469-8742488 | None:intergenic | 30.0% |
| !!! | ATTGGTTTTTCCATCCAAAA+AGG | - | chr4.3:8741696-8741715 | None:intergenic | 30.0% |
| AAACCGACCCATGTTATTAT+TGG | + | chr4.3:8743493-8743512 | MS.gene030665:CDS | 35.0% | |
| AAATAAGCTGTCAGCAAAAC+TGG | + | chr4.3:8742480-8742499 | MS.gene030665:CDS | 35.0% | |
| AAGCATACACTGTCAAAATG+AGG | - | chr4.3:8740943-8740962 | None:intergenic | 35.0% | |
| AAGCCTCTATTAAATCTGAC+AGG | + | chr4.3:8743528-8743547 | MS.gene030665:CDS | 35.0% | |
| AAGGTGACTACCTTGTAATA+TGG | + | chr4.3:8741329-8741348 | MS.gene030665:intron | 35.0% | |
| AATATGAGTCTGAAGGCAAA+TGG | + | chr4.3:8739931-8739950 | MS.gene030665:CDS | 35.0% | |
| ACATTGAGATCCACATTTGA+CGG | - | chr4.3:8739878-8739897 | None:intergenic | 35.0% | |
| ACCTTCTACATAGAGTTCAA+AGG | - | chr4.3:8741773-8741792 | None:intergenic | 35.0% | |
| ACTCTCAGCTAGCAATAAAA+AGG | + | chr4.3:8739971-8739990 | MS.gene030665:CDS | 35.0% | |
| ACTTTACAACCCTATCCTAT+GGG | + | chr4.3:8742666-8742685 | MS.gene030665:intron | 35.0% | |
| AGATCTTCAAAAGATATCCG+GGG | + | chr4.3:8740530-8740549 | MS.gene030665:intron | 35.0% | |
| AGCCTCTATTAAATCTGACA+GGG | + | chr4.3:8743529-8743548 | MS.gene030665:CDS | 35.0% | |
| ATAAGGGTCATGCTAAGTTA+AGG | - | chr4.3:8740333-8740352 | None:intergenic | 35.0% | |
| ATCTAGTGGAAAACTGATCA+AGG | + | chr4.3:8742513-8742532 | MS.gene030665:CDS | 35.0% | |
| ATGAGAATAGCACCCAAATA+TGG | - | chr4.3:8743367-8743386 | None:intergenic | 35.0% | |
| ATGGAGAAATATGAGTCTGA+AGG | + | chr4.3:8739924-8739943 | MS.gene030665:CDS | 35.0% | |
| ATGTTCCTACATTAACCCAT+AGG | - | chr4.3:8742684-8742703 | None:intergenic | 35.0% | |
| CAAATGTGGATCTCAATGTT+TGG | + | chr4.3:8739879-8739898 | MS.gene030665:intron | 35.0% | |
| CCTTCTACATAGAGTTCAAA+GGG | - | chr4.3:8741772-8741791 | None:intergenic | 35.0% | |
| CTACATTAACCCATAGGATA+GGG | - | chr4.3:8742678-8742697 | None:intergenic | 35.0% | |
| CTCCCTTCCAATAATAACAT+GGG | - | chr4.3:8743503-8743522 | None:intergenic | 35.0% | |
| CTCTCAGCTAGCAATAAAAA+GGG | + | chr4.3:8739972-8739991 | MS.gene030665:CDS | 35.0% | |
| CTTAGTATATCTTGACCCTT+TGG | + | chr4.3:8742206-8742225 | MS.gene030665:intron | 35.0% | |
| CTTAGTATTTGTCCATGAAG+CGG | - | chr4.3:8742822-8742841 | None:intergenic | 35.0% | |
| CTTCCAATAATAACATGGGT+CGG | - | chr4.3:8743499-8743518 | None:intergenic | 35.0% | |
| GAAAAACCAAAGTCTCACAT+TGG | + | chr4.3:8742881-8742900 | MS.gene030665:intron | 35.0% | |
| GACCCATGTTATTATTGGAA+GGG | + | chr4.3:8743498-8743517 | MS.gene030665:CDS | 35.0% | |
| GAGATCTTCAAAAGATATCC+GGG | + | chr4.3:8740529-8740548 | MS.gene030665:intron | 35.0% | |
| GATCTCAATGTTTGGTTATG+TGG | + | chr4.3:8739887-8739906 | MS.gene030665:intron | 35.0% | |
| TAAAGTCTCGTCTTGTGTAT+TGG | - | chr4.3:8740582-8740601 | None:intergenic | 35.0% | |
| TACAACACATGGTTAAACTC+AGG | - | chr4.3:8739749-8739768 | None:intergenic | 35.0% | |
| TACATCTATACTCACCTAGT+GGG | + | chr4.3:8741408-8741427 | MS.gene030665:intron | 35.0% | |
| TATGTCCTATTCTGCAAACA+AGG | - | chr4.3:8740748-8740767 | None:intergenic | 35.0% | |
| TCAAGCTTCTTTGTGCAAAT+AGG | - | chr4.3:8742112-8742131 | None:intergenic | 35.0% | |
| TCCTCTATCTGAATATGCTT+GGG | - | chr4.3:8743471-8743490 | None:intergenic | 35.0% | |
| TCTATAGCATTCCATTTGGT+TGG | + | chr4.3:8742346-8742365 | MS.gene030665:intron | 35.0% | |
| TGGTTTATTTGGTCGAAATG+CGG | + | chr4.3:8740445-8740464 | MS.gene030665:intron | 35.0% | |
| TTACATCTATACTCACCTAG+TGG | + | chr4.3:8741407-8741426 | MS.gene030665:intron | 35.0% | |
| TTCCTCTATCTGAATATGCT+TGG | - | chr4.3:8743472-8743491 | None:intergenic | 35.0% | |
| TTGTGAATTATCCTTGGAAG+TGG | + | chr4.3:8740495-8740514 | MS.gene030665:intron | 35.0% | |
| ! | AACCTTTTGATAGACCTTTC+CGG | - | chr4.3:8740123-8740142 | None:intergenic | 35.0% |
| ! | AGAGCTAGTTTAGAAGAAGA+AGG | + | chr4.3:8742052-8742071 | MS.gene030665:intron | 35.0% |
| ! | AGCAATATCTAGCTTGAATG+AGG | + | chr4.3:8741005-8741024 | MS.gene030665:CDS | 35.0% |
| ! | ATGAACCTTGTTTGCAGAAT+AGG | + | chr4.3:8740740-8740759 | MS.gene030665:intron | 35.0% |
| ! | CATTTACTCTAAAGAGGTAG+TGG | + | chr4.3:8742847-8742866 | MS.gene030665:intron | 35.0% |
| ! | GGCTTTTTGCAAAAAGATGA+CGG | + | chr4.3:8740614-8740633 | MS.gene030665:intron | 35.0% |
| ! | TATTTTCCGTGATCTGTGAT+TGG | + | chr4.3:8740703-8740722 | MS.gene030665:intron | 35.0% |
| ! | TCAAGGTTTGCTTATGATGT+TGG | + | chr4.3:8739789-8739808 | MS.gene030665:intron | 35.0% |
| ! | TGACTTGTGATTTCCATGAA+TGG | + | chr4.3:8742180-8742199 | MS.gene030665:intron | 35.0% |
| ! | TGGGTTGAGCTTTATATTTC+AGG | + | chr4.3:8743418-8743437 | MS.gene030665:intron | 35.0% |
| !! | AGAGGTAGTGGATTTGTATT+CGG | + | chr4.3:8742859-8742878 | MS.gene030665:intron | 35.0% |
| !! | CGAGTTTTGTGAATTATCCT+TGG | + | chr4.3:8740489-8740508 | MS.gene030665:intron | 35.0% |
| !! | TAACTTCTAAGGCTCTACTT+AGG | - | chr4.3:8742919-8742938 | None:intergenic | 35.0% |
| !!! | TTGGGTGCTATTCTCATTTT+TGG | + | chr4.3:8743370-8743389 | MS.gene030665:intron | 35.0% |
| AAAAACTCGTGCGTGAGATA+AGG | + | chr4.3:8743014-8743033 | MS.gene030665:intron | 40.0% | |
| AAATGTTGGACCGTCAAATG+TGG | + | chr4.3:8739865-8739884 | MS.gene030665:intron | 40.0% | |
| AACACAACATTCATGGACCT+AGG | + | chr4.3:8741723-8741742 | MS.gene030665:intron | 40.0% | |
| AACCCACTCTCAAAAGATAG+GGG | - | chr4.3:8742772-8742791 | None:intergenic | 40.0% | |
| AAGAAAGGCTGAGATAGACT+TGG | + | chr4.3:8743595-8743614 | MS.gene030665:CDS | 40.0% | |
| AAGATAGGGGATGTAAAGAC+AGG | - | chr4.3:8742759-8742778 | None:intergenic | 40.0% | |
| AAGCAATTATGGTGTACGGA+TGG | - | chr4.3:8742001-8742020 | None:intergenic | 40.0% | |
| AAGCATACTAGCAAGGAAAC+TGG | - | chr4.3:8740846-8740865 | None:intergenic | 40.0% | |
| AATCACAAGTCACAGTAACC+AGG | - | chr4.3:8742172-8742191 | None:intergenic | 40.0% | |
| AATGTTGTGTTTCCGAGGAT+TGG | - | chr4.3:8741714-8741733 | None:intergenic | 40.0% | |
| ACACATGAATAGAAGGCAAG+CGG | + | chr4.3:8741649-8741668 | MS.gene030665:intron | 40.0% | |
| ACACTACTGAACTTGGTTCA+TGG | - | chr4.3:8742971-8742990 | None:intergenic | 40.0% | |
| ACAGAAATGGTCATCAGAAG+AGG | + | chr4.3:8739658-8739677 | MS.gene030665:CDS | 40.0% | |
| ACCCAAGCATATTCAGATAG+AGG | + | chr4.3:8743467-8743486 | MS.gene030665:CDS | 40.0% | |
| ACCCCTGTCAGATTTAATAG+AGG | - | chr4.3:8743534-8743553 | None:intergenic | 40.0% | |
| AGAACACGCTTTCTCATGTT+TGG | + | chr4.3:8741860-8741879 | MS.gene030665:intron | 40.0% | |
| AGAACCCACTCTCAAAAGAT+AGG | - | chr4.3:8742774-8742793 | None:intergenic | 40.0% | |
| AGCAATTATGGTGTACGGAT+GGG | - | chr4.3:8742000-8742019 | None:intergenic | 40.0% | |
| AGTAACGAGATTTACAGCCA+CGG | - | chr4.3:8740031-8740050 | None:intergenic | 40.0% | |
| ATAGATCGCATTCTACCACA+AGG | - | chr4.3:8742245-8742264 | None:intergenic | 40.0% | |
| ATAGCAATGTCATGTCTCCT+AGG | - | chr4.3:8741743-8741762 | None:intergenic | 40.0% | |
| ATCACCACTTGTGGGATTAA+GGG | - | chr4.3:8741940-8741959 | None:intergenic | 40.0% | |
| ATCGACCGTAATATCCCTAT+TGG | + | chr4.3:8740425-8740444 | MS.gene030665:intron | 40.0% | |
| ATTAGGCAAGCATACTAGCA+AGG | - | chr4.3:8740853-8740872 | None:intergenic | 40.0% | |
| CAAAACTCGATTCCACCAAA+CGG | - | chr4.3:8740478-8740497 | None:intergenic | 40.0% | |
| CAATGTTTGGTTATGTGGGT+TGG | + | chr4.3:8739892-8739911 | MS.gene030665:intron | 40.0% | |
| CAATTCTACGACTGCAAACA+AGG | - | chr4.3:8741497-8741516 | None:intergenic | 40.0% | |
| CACAGTAACCAGGTTTCAAA+AGG | - | chr4.3:8742162-8742181 | None:intergenic | 40.0% | |
| CACTTTACAACCCTATCCTA+TGG | + | chr4.3:8742665-8742684 | MS.gene030665:intron | 40.0% | |
| CAGATTGGACAACCTTATAG+TGG | + | chr4.3:8740981-8741000 | MS.gene030665:intron | 40.0% | |
| CATTTATTACTCCAGTGCAC+AGG | - | chr4.3:8741436-8741455 | None:intergenic | 40.0% | |
| CCATGTTATTATTGGAAGGG+AGG | + | chr4.3:8743501-8743520 | MS.gene030665:CDS | 40.0% | |
| CCCTTTGAACTCTATGTAGA+AGG | + | chr4.3:8741769-8741788 | MS.gene030665:intron | 40.0% | |
| CCTAATTGAAAGACAATCGC+CGG | - | chr4.3:8740789-8740808 | None:intergenic | 40.0% | |
| CCTACATTAACCCATAGGAT+AGG | - | chr4.3:8742679-8742698 | None:intergenic | 40.0% | |
| CCTATGACCTCCATATTACA+AGG | - | chr4.3:8741342-8741361 | None:intergenic | 40.0% | |
| CCTCCCTTCCAATAATAACA+TGG | - | chr4.3:8743504-8743523 | None:intergenic | 40.0% | |
| CCTTGAGATCGATATTTGAG+CGG | - | chr4.3:8739775-8739794 | None:intergenic | 40.0% | |
| CCTTGTAATATGGAGGTCAT+AGG | + | chr4.3:8741339-8741358 | MS.gene030665:intron | 40.0% | |
| CGACCCATGTTATTATTGGA+AGG | + | chr4.3:8743497-8743516 | MS.gene030665:CDS | 40.0% | |
| CGGCGATTGTCTTTCAATTA+GGG | + | chr4.3:8740787-8740806 | MS.gene030665:intron | 40.0% | |
| CTATCTGAATATGCTTGGGT+AGG | - | chr4.3:8743467-8743486 | None:intergenic | 40.0% | |
| CTATTAAATCTGACAGGGGT+GGG | + | chr4.3:8743534-8743553 | MS.gene030665:CDS | 40.0% | |
| GAACCAAGTTCAGTAGTGTT+GGG | + | chr4.3:8742972-8742991 | MS.gene030665:intron | 40.0% | |
| GAACCCACTCTCAAAAGATA+GGG | - | chr4.3:8742773-8742792 | None:intergenic | 40.0% | |
| GATCTTCAAAAGATATCCGG+GGG | + | chr4.3:8740531-8740550 | MS.gene030665:intron | 40.0% | |
| GCCTCTATTAAATCTGACAG+GGG | + | chr4.3:8743530-8743549 | MS.gene030665:CDS | 40.0% | |
| GGAAAGGTCTATCAAAAGGT+TGG | + | chr4.3:8740122-8740141 | MS.gene030665:intron | 40.0% | |
| GGTTTATTTGGTCGAAATGC+GGG | + | chr4.3:8740446-8740465 | MS.gene030665:intron | 40.0% | |
| GTGACTACCTTGTAATATGG+AGG | + | chr4.3:8741332-8741351 | MS.gene030665:intron | 40.0% | |
| TAGAGCCTTAGAAGTTAGCT+TGG | + | chr4.3:8742922-8742941 | MS.gene030665:intron | 40.0% | |
| TAGATCGCATTCTACCACAA+GGG | - | chr4.3:8742244-8742263 | None:intergenic | 40.0% | |
| TATCACCACTTGTGGGATTA+AGG | - | chr4.3:8741941-8741960 | None:intergenic | 40.0% | |
| TATGCTGGAAATTAAGGGTC+CGG | + | chr4.3:8740101-8740120 | MS.gene030665:CDS | 40.0% | |
| TATTAAATCTGACAGGGGTG+GGG | + | chr4.3:8743535-8743554 | MS.gene030665:CDS | 40.0% | |
| TCTATTAAATCTGACAGGGG+TGG | + | chr4.3:8743533-8743552 | MS.gene030665:CDS | 40.0% | |
| TCTCACATTGGCCAGAAATA+AGG | + | chr4.3:8742893-8742912 | MS.gene030665:intron | 40.0% | |
| TGAACCAAGTTCAGTAGTGT+TGG | + | chr4.3:8742971-8742990 | MS.gene030665:intron | 40.0% | |
| TGGATGGAAAAACCAATCCT+CGG | + | chr4.3:8741699-8741718 | MS.gene030665:intron | 40.0% | |
| TTCACTTGTCTTTCAGCACA+TGG | - | chr4.3:8742089-8742108 | None:intergenic | 40.0% | |
| TTGAGCGGATATACAACACA+TGG | - | chr4.3:8739760-8739779 | None:intergenic | 40.0% | |
| TTTGCACAAAGAAGCTTGAG+TGG | + | chr4.3:8742113-8742132 | MS.gene030665:intron | 40.0% | |
| ! | AATAAAAAGGGTGCGTCATC+AGG | + | chr4.3:8739984-8740003 | MS.gene030665:CDS | 40.0% |
| ! | ATTAAGGGTTGGGGCTTTTA+TGG | - | chr4.3:8741925-8741944 | None:intergenic | 40.0% |
| ! | CCTATCCTATGGGTTAATGT+AGG | + | chr4.3:8742676-8742695 | MS.gene030665:intron | 40.0% |
| ! | GAAAAAAGTGGCTTGTAAGG+AGG | - | chr4.3:8743072-8743091 | None:intergenic | 40.0% |
| ! | TCATGTTTGGCCACTTTGTT+TGG | + | chr4.3:8741873-8741892 | MS.gene030665:intron | 40.0% |
| !! | AAACTAGCTCTGCTTCATGA+TGG | - | chr4.3:8742043-8742062 | None:intergenic | 40.0% |
| !! | ATCCCCTATCTTTTGAGAGT+GGG | + | chr4.3:8742767-8742786 | MS.gene030665:intron | 40.0% |
| !! | CGGAAAGTGTCAAAAGCAAA+TGG | + | chr4.3:8741816-8741835 | MS.gene030665:intron | 40.0% |
| !! | CTCTACTTAGGCCTTATTTC+TGG | - | chr4.3:8742907-8742926 | None:intergenic | 40.0% |
| !! | TGTGGGTTGGATAGGATAAA+TGG | + | chr4.3:8739905-8739924 | MS.gene030665:intron | 40.0% |
| !! | TTTGGTTATGTGGGTTGGAT+AGG | + | chr4.3:8739897-8739916 | MS.gene030665:intron | 40.0% |
| AAAGCTGGAGTTGTGAAGCA+TGG | + | chr4.3:8739692-8739711 | MS.gene030665:CDS | 45.0% | |
| AAGACGAGACTTTACCACAG+TGG | + | chr4.3:8740588-8740607 | MS.gene030665:intron | 45.0% | |
| AAGGCAAATGGATCATCCTC+CGG | + | chr4.3:8739943-8739962 | MS.gene030665:CDS | 45.0% | |
| ACACCCAACACTACTGAACT+TGG | - | chr4.3:8742978-8742997 | None:intergenic | 45.0% | |
| ACTTGTGGGATTAAGGGTTG+GGG | - | chr4.3:8741934-8741953 | None:intergenic | 45.0% | |
| AGAAGCTGAAGAGGCAACAA+AGG | + | chr4.3:8743703-8743722 | MS.gene030665:CDS | 45.0% | |
| AGATCGCATTCTACCACAAG+GGG | - | chr4.3:8742243-8742262 | None:intergenic | 45.0% | |
| AGGAGGAAAACATGCATGTG+TGG | - | chr4.3:8741976-8741995 | None:intergenic | 45.0% | |
| ATGGTCATCAGAAGAGGAAG+CGG | + | chr4.3:8739664-8739683 | MS.gene030665:CDS | 45.0% | |
| ATTAAATCTGACAGGGGTGG+GGG | + | chr4.3:8743536-8743555 | MS.gene030665:CDS | 45.0% | |
| ATTATGGTGTACGGATGGGT+AGG | - | chr4.3:8741996-8742015 | None:intergenic | 45.0% | |
| CACATGAATAGAAGGCAAGC+GGG | + | chr4.3:8741650-8741669 | MS.gene030665:intron | 45.0% | |
| CACTTGTGGGATTAAGGGTT+GGG | - | chr4.3:8741935-8741954 | None:intergenic | 45.0% | |
| CCATGAATGTTGTGTTTCCG+AGG | - | chr4.3:8741719-8741738 | None:intergenic | 45.0% | |
| CCGCTCAAATATCGATCTCA+AGG | + | chr4.3:8739772-8739791 | MS.gene030665:CDS | 45.0% | |
| CCGGCGATTGTCTTTCAATT+AGG | + | chr4.3:8740786-8740805 | MS.gene030665:intron | 45.0% | |
| CCTCGGAAACACAACATTCA+TGG | + | chr4.3:8741716-8741735 | MS.gene030665:intron | 45.0% | |
| CTCCACCAAGCTAACTTCTA+AGG | - | chr4.3:8742930-8742949 | None:intergenic | 45.0% | |
| CTGGATGATCTTAACACGCT+TGG | - | chr4.3:8740827-8740846 | None:intergenic | 45.0% | |
| GATATCCCCATTTGTAGCAG+AGG | + | chr4.3:8742729-8742748 | MS.gene030665:intron | 45.0% | |
| GGCTGAGATAGACTTGGAAT+TGG | + | chr4.3:8743601-8743620 | MS.gene030665:CDS | 45.0% | |
| GTCCGGAAAGGTCTATCAAA+AGG | + | chr4.3:8740118-8740137 | MS.gene030665:CDS | 45.0% | |
| GTGTTGCCAATCACAGATCA+CGG | - | chr4.3:8740712-8740731 | None:intergenic | 45.0% | |
| TAAGCTGTCAGCAAAACTGG+TGG | + | chr4.3:8742483-8742502 | MS.gene030665:CDS | 45.0% | |
| TGAAGCATGGCGTAGGTAAA+TGG | + | chr4.3:8739705-8739724 | MS.gene030665:CDS | 45.0% | |
| TGGAAATTAAGGGTCCGGAA+AGG | + | chr4.3:8740106-8740125 | MS.gene030665:CDS | 45.0% | |
| TGTAGAAGGTTAACACCCTC+TGG | + | chr4.3:8741783-8741802 | MS.gene030665:intron | 45.0% | |
| TTCTGGCCAATGTGAGACTT+TGG | - | chr4.3:8742890-8742909 | None:intergenic | 45.0% | |
| ! | ACTGAGGTATCACCACTTGT+GGG | - | chr4.3:8741948-8741967 | None:intergenic | 45.0% |
| ! | AGCCTTAGAAGTTAGCTTGG+TGG | + | chr4.3:8742925-8742944 | MS.gene030665:intron | 45.0% |
| ! | CTGGTGGATCTTGTATCTAG+TGG | + | chr4.3:8742499-8742518 | MS.gene030665:CDS | 45.0% |
| ! | GTTGTAAAGTGCACCGATAC+TGG | - | chr4.3:8742656-8742675 | None:intergenic | 45.0% |
| ! | TCTAGCTTGAATGAGGTCGA+TGG | + | chr4.3:8741012-8741031 | MS.gene030665:CDS | 45.0% |
| ! | TTTGTTTGGCGCGGCTTTTA+GGG | + | chr4.3:8741887-8741906 | MS.gene030665:intron | 45.0% |
| !! | CATCCCCTATCTTTTGAGAG+TGG | + | chr4.3:8742766-8742785 | MS.gene030665:intron | 45.0% |
| !! | TGGGTGCTACTAGACAGAAA+TGG | + | chr4.3:8739645-8739664 | MS.gene030665:CDS | 45.0% |
| !!! | ACTCGAAGCCTTTTGAAACC+TGG | + | chr4.3:8742151-8742170 | MS.gene030665:intron | 45.0% |
| AAAAGCCGCGCCAAACAAAG+TGG | - | chr4.3:8741886-8741905 | None:intergenic | 50.0% | |
| AAATGCGGGAAAGCTCCGTT+TGG | + | chr4.3:8740460-8740479 | MS.gene030665:intron | 50.0% | |
| AGAAGCAGAAGCTGATGCAG+CGG | + | chr4.3:8743739-8743758 | MS.gene030665:CDS | 50.0% | |
| AGCTGAAGAGGCAACAAAGG+AGG | + | chr4.3:8743706-8743725 | MS.gene030665:CDS | 50.0% | |
| AGGCAAATGGATCATCCTCC+GGG | + | chr4.3:8739944-8739963 | MS.gene030665:CDS | 50.0% | |
| AGGCCAACCTCTGCTACAAA+TGG | - | chr4.3:8742739-8742758 | None:intergenic | 50.0% | |
| CACTAGTCACAATGAACCCC+CGG | - | chr4.3:8740550-8740569 | None:intergenic | 50.0% | |
| CCAACCCTTAATCCCACAAG+TGG | + | chr4.3:8741933-8741952 | MS.gene030665:intron | 50.0% | |
| CCACTTGTGGGATTAAGGGT+TGG | - | chr4.3:8741936-8741955 | None:intergenic | 50.0% | |
| CGAACCTTGGCACATTGGTA+AGG | + | chr4.3:8741310-8741329 | MS.gene030665:intron | 50.0% | |
| CTTCATCTGCAAGCGAACCT+TGG | + | chr4.3:8741297-8741316 | MS.gene030665:intron | 50.0% | |
| GAGACTTTACCACAGTGGAG+CGG | + | chr4.3:8740593-8740612 | MS.gene030665:intron | 50.0% | |
| GCCAACCTCTGCTACAAATG+GGG | - | chr4.3:8742737-8742756 | None:intergenic | 50.0% | |
| GCTTCATGATGGCATCGTCT+TGG | - | chr4.3:8742032-8742051 | None:intergenic | 50.0% | |
| GGCCAACCTCTGCTACAAAT+GGG | - | chr4.3:8742738-8742757 | None:intergenic | 50.0% | |
| GTAGAACCAATACTGCGCAC+CGG | + | chr4.3:8742447-8742466 | MS.gene030665:intron | 50.0% | |
| GTCACCTTACCAATGTGCCA+AGG | - | chr4.3:8741317-8741336 | None:intergenic | 50.0% | |
| TCCCCATTTGTAGCAGAGGT+TGG | + | chr4.3:8742733-8742752 | MS.gene030665:intron | 50.0% | |
| TGCATGTGTGGACTTGACTG+AGG | - | chr4.3:8741964-8741983 | None:intergenic | 50.0% | |
| ! | ACAGCTGCTGGTTGTGAGTT+TGG | + | chr4.3:8743193-8743212 | MS.gene030665:intron | 50.0% |
| ! | AGGGTTGGGGCTTTTATGGT+AGG | - | chr4.3:8741921-8741940 | None:intergenic | 50.0% |
| ! | AGTGCACCGATACTGGTGAT+TGG | - | chr4.3:8742649-8742668 | None:intergenic | 50.0% |
| ! | CAGCTGCTGGTTGTGAGTTT+GGG | + | chr4.3:8743194-8743213 | MS.gene030665:intron | 50.0% |
| ! | CGCTGCTAAGCCTTTTTGGA+TGG | + | chr4.3:8741683-8741702 | MS.gene030665:intron | 50.0% |
| ! | GACTGAGGTATCACCACTTG+TGG | - | chr4.3:8741949-8741968 | None:intergenic | 50.0% |
| ! | GGGGCATTTGAAGCACCAAA+GGG | - | chr4.3:8742224-8742243 | None:intergenic | 50.0% |
| ! | TGCTGCTTAGATACAGCTGC+TGG | + | chr4.3:8743181-8743200 | MS.gene030665:intron | 50.0% |
| ! | TTTGGCCACTTTGTTTGGCG+CGG | + | chr4.3:8741878-8741897 | MS.gene030665:intron | 50.0% |
| !! | AGGGGCATTTGAAGCACCAA+AGG | - | chr4.3:8742225-8742244 | None:intergenic | 50.0% |
| !! | CTTTGTTTGGCGCGGCTTTT+AGG | + | chr4.3:8741886-8741905 | MS.gene030665:intron | 50.0% |
| AATCTGCCGGTGCGCAGTAT+TGG | - | chr4.3:8742456-8742475 | None:intergenic | 55.0% | |
| AGAGGCAACAAAGGAGGCAG+AGG | + | chr4.3:8743712-8743731 | MS.gene030665:CDS | 55.0% | |
| ATGGTGTACGGATGGGTAGG+AGG | - | chr4.3:8741993-8742012 | None:intergenic | 55.0% | |
| CAAGCGAAGAGGCTGTTGCA+AGG | - | chr4.3:8741372-8741391 | None:intergenic | 55.0% | |
| CTCTTCAGCTTCTGCCATGG+CGG | - | chr4.3:8743696-8743715 | None:intergenic | 55.0% | |
| GCAAGCGAACCTTGGCACAT+TGG | + | chr4.3:8741305-8741324 | MS.gene030665:intron | 55.0% | |
| GGAGTTGTGAAGCATGGCGT+AGG | + | chr4.3:8739698-8739717 | MS.gene030665:CDS | 55.0% | |
| GGCAAATGGATCATCCTCCG+GGG | + | chr4.3:8739945-8739964 | MS.gene030665:CDS | 55.0% | |
| GGTGCTTCAAATGCCCCTTG+TGG | + | chr4.3:8742227-8742246 | MS.gene030665:intron | 55.0% | |
| GGTTAACACCCTCTGGTGCT+AGG | + | chr4.3:8741790-8741809 | MS.gene030665:intron | 55.0% | |
| TGCAAAAAGCCGCTCCACTG+TGG | - | chr4.3:8740605-8740624 | None:intergenic | 55.0% | |
| TGCAACAGCCTCTTCGCTTG+CGG | + | chr4.3:8741372-8741391 | MS.gene030665:intron | 55.0% | |
| TGCCTCTTCAGCTTCTGCCA+TGG | - | chr4.3:8743699-8743718 | None:intergenic | 55.0% | |
| TGCTAGCTGAGAGTTGTCCC+CGG | - | chr4.3:8739965-8739984 | None:intergenic | 55.0% | |
| TTCCGCTTCCTAGCACCAGA+GGG | - | chr4.3:8741801-8741820 | None:intergenic | 55.0% | |
| TTTCCGCTTCCTAGCACCAG+AGG | - | chr4.3:8741802-8741821 | None:intergenic | 55.0% | |
| ! | GCTGCGCTGCTAAGCCTTTT+TGG | + | chr4.3:8741679-8741698 | MS.gene030665:intron | 55.0% |
| ACGGAGTCGTCACGCTGTTC+TGG | - | chr4.3:8740012-8740031 | None:intergenic | 60.0% | |
| AGAACAGCGTGACGACTCCG+TGG | + | chr4.3:8740011-8740030 | MS.gene030665:CDS | 60.0% | |
| CCTCTTCGCTTGCGGGTGTA+AGG | + | chr4.3:8741380-8741399 | MS.gene030665:intron | 60.0% | |
| CCTTACACCCGCAAGCGAAG+AGG | - | chr4.3:8741383-8741402 | None:intergenic | 60.0% | |
| CGCCATGGCAGAAGCTGAAG+AGG | + | chr4.3:8743694-8743713 | MS.gene030665:CDS | 60.0% | |
| GAGGAAGCGGCTCTCAAAGC+TGG | + | chr4.3:8739677-8739696 | MS.gene030665:CDS | 60.0% | |
| GCAACAGCCTCTTCGCTTGC+GGG | + | chr4.3:8741373-8741392 | MS.gene030665:intron | 60.0% | |
| TAGCTGAGAGTTGTCCCCGG+AGG | - | chr4.3:8739962-8739981 | None:intergenic | 60.0% | |
| TGCGGGAAAGCTCCGTTTGG+TGG | + | chr4.3:8740463-8740482 | MS.gene030665:intron | 60.0% | |
| TGCTGAAGCAGAAGCCGCCA+TGG | + | chr4.3:8743679-8743698 | MS.gene030665:CDS | 60.0% | |
| ! | CACCCTCTGGTGCTAGGAAG+CGG | + | chr4.3:8741796-8741815 | MS.gene030665:intron | 60.0% |
| CCAGTGCACAGGCTCCCACT+AGG | - | chr4.3:8741425-8741444 | None:intergenic | 65.0% | |
| CCTAGTGGGAGCCTGTGCAC+TGG | + | chr4.3:8741422-8741441 | MS.gene030665:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 8739644 | 8743808 | 8739644 | ID=MS.gene030665 |
| chr4.3 | mRNA | 8739644 | 8743808 | 8739644 | ID=MS.gene030665.t1;Parent=MS.gene030665 |
| chr4.3 | exon | 8739644 | 8739793 | 8739644 | ID=MS.gene030665.t1.exon1;Parent=MS.gene030665.t1 |
| chr4.3 | CDS | 8739644 | 8739793 | 8739644 | ID=cds.MS.gene030665.t1;Parent=MS.gene030665.t1 |
| chr4.3 | exon | 8739919 | 8740139 | 8739919 | ID=MS.gene030665.t1.exon2;Parent=MS.gene030665.t1 |
| chr4.3 | CDS | 8739919 | 8740139 | 8739919 | ID=cds.MS.gene030665.t1;Parent=MS.gene030665.t1 |
| chr4.3 | exon | 8740984 | 8741068 | 8740984 | ID=MS.gene030665.t1.exon3;Parent=MS.gene030665.t1 |
| chr4.3 | CDS | 8740984 | 8741068 | 8740984 | ID=cds.MS.gene030665.t1;Parent=MS.gene030665.t1 |
| chr4.3 | exon | 8742451 | 8742534 | 8742451 | ID=MS.gene030665.t1.exon4;Parent=MS.gene030665.t1 |
| chr4.3 | CDS | 8742451 | 8742534 | 8742451 | ID=cds.MS.gene030665.t1;Parent=MS.gene030665.t1 |
| chr4.3 | exon | 8743440 | 8743808 | 8743440 | ID=MS.gene030665.t1.exon5;Parent=MS.gene030665.t1 |
| chr4.3 | CDS | 8743440 | 8743808 | 8743440 | ID=cds.MS.gene030665.t1;Parent=MS.gene030665.t1 |
| Gene Sequence |
| Protein sequence |
