AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030702

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030702.t1 MTR_8g092140 95.745 235 9 1 1 235 1 234 9.00e-159 439
MS.gene030702.t1 MTR_3g095080 63.710 248 69 12 2 235 4 244 7.31e-86 255
MS.gene030702.t1 MTR_3g095080 59.919 247 56 11 2 235 4 220 1.21e-76 231
MS.gene030702.t1 MTR_3g095080 56.701 194 65 11 2 183 4 190 1.01e-46 154
MS.gene030702.t1 MTR_8g007270 57.343 143 50 3 85 227 89 220 2.25e-46 154
MS.gene030702.t1 MTR_5g043880 67.073 82 26 1 136 217 100 180 1.53e-32 119
MS.gene030702.t1 MTR_7g079010 57.303 89 34 2 132 217 110 197 9.59e-31 113
MS.gene030702.t1 MTR_1g086790 66.234 77 25 1 141 217 139 214 5.89e-30 114
MS.gene030702.t1 MTR_4g094588 69.444 72 21 1 146 217 164 234 6.48e-29 111
MS.gene030702.t1 MTR_2g033820 67.568 74 23 1 144 217 187 259 8.68e-29 112
MS.gene030702.t1 MTR_5g094430 59.740 77 30 1 141 217 211 286 1.11e-28 112
MS.gene030702.t1 MTR_5g094430 53.125 64 26 2 161 221 66 128 7.88e-14 70.5
MS.gene030702.t1 MTR_3g056100 62.338 77 28 1 141 217 239 314 1.16e-28 112
MS.gene030702.t1 MTR_3g056100 56.140 57 24 1 161 217 99 154 1.65e-14 72.4
MS.gene030702.t1 MTR_3g056100 62.338 77 28 1 141 217 383 458 1.18e-28 113
MS.gene030702.t1 MTR_3g056100 56.140 57 24 1 161 217 243 298 9.17e-15 73.2
MS.gene030702.t1 MTR_7g109800 56.566 99 39 3 119 217 107 201 1.22e-28 109
MS.gene030702.t1 MTR_3g056100 62.338 77 28 1 141 217 396 471 1.24e-28 113
MS.gene030702.t1 MTR_3g056100 56.140 57 24 1 161 217 243 298 8.98e-15 73.6
MS.gene030702.t1 MTR_3g056100 62.338 77 28 1 141 217 252 327 1.36e-28 112
MS.gene030702.t1 MTR_3g056100 56.140 57 24 1 161 217 99 154 1.64e-14 72.4
MS.gene030702.t1 MTR_5g094430 59.740 77 30 1 141 217 233 308 1.45e-28 112
MS.gene030702.t1 MTR_5g094430 53.125 64 26 2 161 221 88 150 7.02e-14 70.5
MS.gene030702.t1 MTR_3g031220 62.025 79 29 1 139 217 344 421 1.46e-28 112
MS.gene030702.t1 MTR_3g031220 31.579 152 90 4 69 217 113 253 1.45e-14 72.8
MS.gene030702.t1 MTR_5g094430 59.740 77 30 1 141 217 345 420 1.49e-28 113
MS.gene030702.t1 MTR_5g094430 53.125 64 26 2 161 221 200 262 5.21e-14 71.2
MS.gene030702.t1 MTR_3g104750 56.098 82 35 1 140 221 84 164 1.66e-28 106
MS.gene030702.t1 MTR_7g011820 49.565 115 53 3 104 217 356 466 1.82e-28 112
MS.gene030702.t1 MTR_7g011820 59.649 57 22 1 161 217 228 283 2.62e-16 77.8
MS.gene030702.t1 MTR_5g074400 63.636 77 27 1 141 217 401 476 4.40e-28 112
MS.gene030702.t1 MTR_5g074400 56.140 57 24 1 161 217 243 298 1.47e-14 72.8
MS.gene030702.t1 MTR_4g122530 66.216 74 24 1 144 217 192 264 1.25e-27 109
MS.gene030702.t1 MTR_5g091390 65.278 72 24 1 146 217 143 213 2.80e-27 106
MS.gene030702.t1 MTR_4g082580 41.538 130 63 2 113 233 221 346 5.36e-27 107
MS.gene030702.t1 MTR_4g082580 54.386 57 26 0 161 217 145 201 2.62e-15 74.7
MS.gene030702.t1 MTR_8g096730 40.000 115 63 2 125 234 30 143 9.17e-27 101
MS.gene030702.t1 MTR_5g042920 59.740 77 30 1 141 217 301 376 9.97e-27 107
MS.gene030702.t1 MTR_5g042920 45.745 94 44 4 143 232 134 224 2.55e-15 74.7
MS.gene030702.t1 MTR_3g009470 59.740 77 30 1 141 217 476 551 1.36e-26 107
MS.gene030702.t1 MTR_3g009470 56.140 57 24 1 161 217 280 335 4.37e-15 74.3
MS.gene030702.t1 MTR_7g080000 46.491 114 53 2 111 217 376 488 1.48e-26 107
MS.gene030702.t1 MTR_7g080000 52.381 63 29 1 159 221 232 293 1.31e-15 75.9
MS.gene030702.t1 MTR_7g028415 62.857 70 25 1 148 217 81 149 1.53e-26 101
MS.gene030702.t1 MTR_7g028710 62.857 70 25 1 148 217 81 149 1.53e-26 101
MS.gene030702.t1 MTR_1g015140 55.814 86 37 1 132 217 74 158 2.70e-26 100
MS.gene030702.t1 MTR_4g013260 57.500 80 33 1 138 217 314 392 5.02e-26 105
MS.gene030702.t1 MTR_4g013260 52.632 57 27 0 161 217 184 240 4.15e-15 74.3
MS.gene030702.t1 MTR_7g080020 52.381 84 39 1 134 217 467 549 2.03e-25 104
MS.gene030702.t1 MTR_7g080020 55.172 58 25 1 161 218 280 336 5.72e-16 77.0
MS.gene030702.t1 MTR_7g071120 57.143 77 32 1 141 217 305 380 1.33e-24 101
MS.gene030702.t1 MTR_7g071120 54.386 57 25 1 161 217 166 221 3.39e-14 71.6
MS.gene030702.t1 MTR_3g095040 58.442 77 30 2 146 221 104 179 7.47e-24 95.1
MS.gene030702.t1 MTR_7g100510 57.534 73 30 1 145 217 346 417 5.02e-23 96.7
MS.gene030702.t1 MTR_7g100510 57.143 56 23 1 162 217 190 244 1.40e-14 72.8
MS.gene030702.t1 MTR_1g077780 48.864 88 44 1 144 231 46 132 4.25e-22 89.0
MS.gene030702.t1 MTR_1g078260 43.519 108 46 2 140 232 212 319 5.83e-22 94.0
MS.gene030702.t1 MTR_7g062220 42.424 99 57 0 119 217 82 180 2.11e-21 90.9
MS.gene030702.t1 MTR_8g092010 53.521 71 32 1 147 217 95 164 3.93e-20 84.7
MS.gene030702.t1 MTR_5g097490 50.667 75 36 1 145 219 237 310 3.48e-19 85.5
MS.gene030702.t1 MTR_2g105060 47.436 78 39 2 142 217 74 151 4.36e-19 83.2
MS.gene030702.t1 MTR_1g009613 38.095 126 66 4 99 218 201 320 5.96e-19 84.3
MS.gene030702.t1 MTR_2g105060 47.436 78 39 2 142 217 149 226 6.10e-19 84.3
MS.gene030702.t1 MTR_2g088000 43.158 95 51 3 138 230 327 420 1.17e-18 84.7
MS.gene030702.t1 MTR_6g086555 47.945 73 36 2 146 217 192 263 1.33e-18 84.0
MS.gene030702.t1 MTR_3g108960 46.429 84 40 3 135 217 292 371 2.34e-18 83.2
MS.gene030702.t1 MTR_4g130900 48.052 77 39 1 141 217 340 415 2.90e-18 83.6
MS.gene030702.t1 MTR_4g094908 43.678 87 44 2 133 218 242 324 3.37e-18 82.4
MS.gene030702.t1 MTR_5g016610 43.820 89 45 2 133 220 175 259 4.56e-18 81.3
MS.gene030702.t1 MTR_4g107970 46.753 77 39 2 143 218 161 236 1.71e-17 81.3
MS.gene030702.t1 MTR_4g107970 46.753 77 39 2 143 218 238 313 2.53e-17 80.9
MS.gene030702.t1 MTR_4g132430 47.368 76 38 2 143 217 110 184 3.27e-17 79.7
MS.gene030702.t1 MTR_4g132430 47.368 76 38 2 143 217 244 318 7.71e-17 79.3
MS.gene030702.t1 MTR_7g110720 51.562 64 30 1 155 217 183 246 9.38e-17 79.0
MS.gene030702.t1 MTR_7g110720 51.562 64 30 1 155 217 210 273 1.01e-16 79.0
MS.gene030702.t1 MTR_2g023930 46.053 76 39 2 143 217 288 362 1.53e-16 78.6
MS.gene030702.t1 MTR_3g053330 44.156 77 41 2 143 218 234 309 2.30e-16 77.8
MS.gene030702.t1 MTR_4g127040 39.080 87 48 2 133 218 221 303 2.75e-16 76.6
MS.gene030702.t1 MTR_1g013760 52.632 57 26 1 162 217 141 197 3.77e-16 75.9
MS.gene030702.t1 MTR_0117s0040 51.613 62 29 1 157 217 70 131 3.86e-16 75.5
MS.gene030702.t1 MTR_7g009730 52.381 63 29 1 156 217 214 276 6.70e-16 76.6
MS.gene030702.t1 MTR_3g106060 50.000 60 29 1 160 218 137 196 1.01e-15 75.1
MS.gene030702.t1 MTR_5g067680 52.542 59 25 1 161 216 202 260 1.96e-15 74.7
MS.gene030702.t1 MTR_1g070455 38.824 85 47 2 135 218 271 351 2.05e-15 74.7
MS.gene030702.t1 MTR_4g049790 48.611 72 35 2 147 217 299 369 2.35e-15 75.1
MS.gene030702.t1 MTR_8g099350 52.308 65 28 1 161 222 132 196 3.51e-15 73.9
MS.gene030702.t1 MTR_3g090860 53.333 60 25 1 160 216 132 191 4.33e-15 73.6
MS.gene030702.t1 MTR_3g009470 56.140 57 24 1 161 217 280 335 5.28e-15 73.9
MS.gene030702.t1 MTR_3g031220 31.579 152 90 4 69 217 113 253 8.05e-15 73.2
MS.gene030702.t1 MTR_3g031220 62.791 43 15 1 139 181 344 385 3.34e-11 62.4
MS.gene030702.t1 MTR_2g045360 36.752 117 69 4 102 217 156 268 8.31e-15 73.2
MS.gene030702.t1 MTR_4g007060 48.333 60 30 1 159 217 126 185 9.66e-15 72.0
MS.gene030702.t1 MTR_1g013790 43.077 65 36 1 159 222 99 163 9.98e-15 71.6
MS.gene030702.t1 MTR_4g007060 48.333 60 30 1 159 217 160 219 1.05e-14 72.4
MS.gene030702.t1 MTR_4g094412 51.667 60 28 1 159 217 232 291 1.70e-14 72.4
MS.gene030702.t1 MTR_8g028565 37.374 99 52 3 123 217 120 212 1.84e-14 71.6
MS.gene030702.t1 MTR_4g094412 51.667 60 28 1 159 217 241 300 1.87e-14 72.4
MS.gene030702.t1 MTR_2g075750 48.333 60 28 1 159 215 26 85 2.05e-14 69.3
MS.gene030702.t1 MTR_2g032030 33.333 126 78 3 97 217 200 324 3.78e-14 71.2
MS.gene030702.t1 MTR_2g075610 48.333 60 28 1 159 215 27 86 4.02e-14 68.9
MS.gene030702.t1 MTR_2g032030 33.333 126 78 3 97 217 200 324 4.08e-14 71.2
MS.gene030702.t1 MTR_7g073430 50.847 59 26 1 161 216 122 180 4.13e-14 70.5
MS.gene030702.t1 MTR_2g075700 50.820 61 27 1 159 216 142 202 7.10e-14 70.1
MS.gene030702.t1 MTR_5g074200 52.632 57 26 1 161 217 220 275 2.12e-13 68.6
MS.gene030702.t1 MTR_2g075680 46.667 60 29 1 159 215 146 205 3.22e-13 68.2
MS.gene030702.t1 MTR_7g073380 40.476 84 40 3 143 216 98 181 3.27e-13 67.8
MS.gene030702.t1 MTR_7g117200 47.143 70 32 2 160 224 117 186 4.70e-13 67.8
MS.gene030702.t1 MTR_8g087000 48.276 58 29 1 162 218 78 135 5.06e-13 66.6
MS.gene030702.t1 MTR_8g087000 48.276 58 29 1 162 218 77 134 5.86e-13 66.6
MS.gene030702.t1 MTR_5g097500 42.667 75 42 1 145 219 215 288 6.62e-13 67.0
MS.gene030702.t1 MTR_4g049760 45.946 74 38 2 159 230 288 361 1.16e-12 67.0
MS.gene030702.t1 MTR_8g098945 47.692 65 32 2 155 217 122 186 1.22e-12 65.9
MS.gene030702.t1 MTR_2g016770 46.552 58 30 1 162 218 36 93 1.36e-12 65.1
MS.gene030702.t1 MTR_2g024350 46.552 58 30 1 162 218 9 66 1.48e-12 65.1
MS.gene030702.t1 MTR_2g016770 46.552 58 30 1 162 218 28 85 1.50e-12 64.7
MS.gene030702.t1 MTR_8g005750 45.763 59 29 1 161 216 103 161 1.92e-12 65.5
MS.gene030702.t1 MTR_2g024380 46.552 58 30 1 162 218 252 309 2.51e-12 66.2
MS.gene030702.t1 MTR_7g079040 36.842 95 53 2 124 217 123 211 2.65e-12 65.5
MS.gene030702.t1 MTR_0002s1250 44.068 59 30 1 161 216 111 169 3.24e-12 64.7
MS.gene030702.t1 MTR_8g027860 35.714 126 72 3 107 229 88 207 3.53e-12 65.5
MS.gene030702.t1 MTR_7g109600 49.123 57 28 1 162 217 54 110 9.14e-12 63.5
MS.gene030702.t1 MTR_2g075690 43.333 60 31 1 159 215 139 198 1.90e-11 62.8
MS.gene030702.t1 MTR_5g029850 44.118 68 37 1 110 177 1 67 1.94e-11 58.5
MS.gene030702.t1 MTR_8g067650 35.052 97 61 2 128 222 306 402 2.23e-11 63.2
MS.gene030702.t1 MTR_2g083870 46.552 58 30 1 162 218 81 138 2.41e-11 62.4
MS.gene030702.t1 MTR_8g032510 36.634 101 54 3 118 215 83 176 3.67e-11 62.0
MS.gene030702.t1 MTR_1g099600 36.264 91 51 2 129 218 159 243 5.08e-11 61.6
MS.gene030702.t1 MTR_8g067635 34.783 92 58 2 133 222 321 412 5.18e-11 62.4
MS.gene030702.t1 MTR_3g093830 42.424 66 30 2 162 219 128 193 5.43e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030702.t1 AT4G39410 72.000 125 23 3 122 235 181 304 6.25e-59 188
MS.gene030702.t1 AT2G44745 65.600 125 39 3 101 222 83 206 7.74e-48 157
MS.gene030702.t1 AT1G69310 65.060 83 28 1 135 217 122 203 2.01e-33 122
MS.gene030702.t1 AT1G69310 65.060 83 28 1 135 217 122 203 2.01e-33 122
MS.gene030702.t1 AT1G69310 65.060 83 28 1 135 217 122 203 2.01e-33 122
MS.gene030702.t1 AT5G41570 61.176 85 32 1 133 217 71 154 2.16e-30 111
MS.gene030702.t1 AT1G64000 63.415 82 29 1 136 217 90 170 2.24e-30 112
MS.gene030702.t1 AT2G46130 59.091 88 34 2 141 228 11 96 1.28e-29 107
MS.gene030702.t1 AT4G18170 65.854 82 26 2 141 221 153 233 1.77e-29 112
MS.gene030702.t1 AT5G49520 67.568 74 23 1 144 217 205 277 2.90e-29 113
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.82e-29 112
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.70e-14 71.2
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.82e-29 112
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.70e-14 71.2
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.82e-29 112
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.70e-14 71.2
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 171 261 4.82e-29 112
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 28 90 3.70e-14 71.2
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 307 397 6.25e-29 114
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 164 226 1.75e-14 72.4
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 275 365 7.15e-29 113
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 132 194 2.25e-14 72.0
MS.gene030702.t1 AT4G26640 55.435 92 33 2 133 217 347 437 8.52e-29 114
MS.gene030702.t1 AT4G26640 53.125 64 29 1 154 217 204 266 1.84e-14 72.4
MS.gene030702.t1 AT5G07100 50.000 110 44 2 108 217 192 290 2.65e-28 109
MS.gene030702.t1 AT5G07100 52.632 57 27 0 161 217 117 173 4.53e-14 70.5
MS.gene030702.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.37e-28 107
MS.gene030702.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.91e-14 68.6
MS.gene030702.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.37e-28 107
MS.gene030702.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.91e-14 68.6
MS.gene030702.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.37e-28 107
MS.gene030702.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.91e-14 68.6
MS.gene030702.t1 AT5G07100 50.000 110 44 2 108 217 99 197 3.37e-28 107
MS.gene030702.t1 AT5G07100 52.632 57 27 0 161 217 24 80 7.91e-14 68.6
MS.gene030702.t1 AT5G26170 64.000 75 26 1 147 221 100 173 4.66e-28 105
MS.gene030702.t1 AT1G69310 60.241 83 28 2 135 217 122 199 9.05e-28 107
MS.gene030702.t1 AT2G47260 60.465 86 32 2 132 217 147 230 1.54e-27 107
MS.gene030702.t1 AT1G29860 64.865 74 25 1 144 217 120 192 1.87e-27 106
MS.gene030702.t1 AT2G38470 63.636 77 27 1 141 217 343 418 2.71e-27 109
MS.gene030702.t1 AT2G38470 54.386 57 25 1 161 217 184 239 1.12e-13 70.1
MS.gene030702.t1 AT2G03340 44.737 114 62 1 104 217 359 471 3.56e-27 108
MS.gene030702.t1 AT2G03340 56.140 57 24 1 161 217 250 305 6.01e-14 70.9
MS.gene030702.t1 AT1G13960 61.039 77 29 1 141 217 390 465 3.72e-27 108
MS.gene030702.t1 AT1G13960 55.932 59 25 1 161 219 229 286 2.43e-15 75.1
MS.gene030702.t1 AT1G13960 61.039 77 29 1 141 217 237 312 6.02e-27 106
MS.gene030702.t1 AT1G13960 55.932 59 25 1 161 219 76 133 9.96e-15 72.8
MS.gene030702.t1 AT2G30250 63.636 77 27 1 141 217 309 384 6.15e-27 107
MS.gene030702.t1 AT2G30250 50.877 57 27 1 161 217 166 221 2.44e-11 63.2
MS.gene030702.t1 AT5G56270 61.039 77 29 1 141 217 468 543 9.05e-27 108
MS.gene030702.t1 AT5G56270 56.140 57 24 1 161 217 273 328 1.38e-15 75.9
MS.gene030702.t1 AT5G46350 65.278 72 24 1 146 217 169 239 1.61e-26 105
MS.gene030702.t1 AT3G01080 55.056 89 35 2 133 217 313 400 2.07e-26 106
MS.gene030702.t1 AT3G01080 56.140 57 24 1 161 217 205 260 2.20e-15 75.1
MS.gene030702.t1 AT3G01080 55.056 89 35 2 133 217 275 362 3.59e-26 105
MS.gene030702.t1 AT3G01080 56.140 57 24 1 161 217 167 222 4.45e-15 73.9
MS.gene030702.t1 AT5G13080 63.380 71 25 1 147 217 54 123 4.39e-26 99.4
MS.gene030702.t1 AT3G01970 54.444 90 37 2 147 233 52 140 5.10e-26 99.4
MS.gene030702.t1 AT4G26440 57.143 77 32 1 141 217 353 428 1.49e-24 101
MS.gene030702.t1 AT4G26440 56.897 58 24 1 161 218 178 234 5.92e-17 79.7
MS.gene030702.t1 AT2G46130 54.545 88 34 3 141 228 11 92 4.40e-24 92.8
MS.gene030702.t1 AT2G37260 62.500 64 24 0 154 217 260 323 6.48e-24 98.2
MS.gene030702.t1 AT2G37260 49.315 73 36 1 146 218 68 139 4.10e-14 70.9
MS.gene030702.t1 AT2G37260 62.500 64 24 0 154 217 262 325 6.92e-24 98.2
MS.gene030702.t1 AT2G37260 49.315 73 36 1 146 218 70 141 4.35e-14 70.9
MS.gene030702.t1 AT5G64810 39.844 128 70 2 90 217 46 166 7.98e-24 94.7
MS.gene030702.t1 AT2G37260 62.500 64 24 0 154 217 342 405 1.22e-23 98.6
MS.gene030702.t1 AT2G37260 49.315 73 36 1 146 218 150 221 4.67e-14 71.2
MS.gene030702.t1 AT3G62340 59.524 84 31 2 134 217 94 174 1.61e-23 95.9
MS.gene030702.t1 AT2G04880 32.273 220 107 9 5 217 155 339 1.30e-21 93.2
MS.gene030702.t1 AT2G04880 55.932 59 25 1 159 217 109 166 1.68e-14 72.4
MS.gene030702.t1 AT1G55600 45.882 85 46 0 133 217 279 363 1.27e-20 90.1
MS.gene030702.t1 AT2G04880 36.420 162 75 6 63 217 223 363 1.32e-20 90.1
MS.gene030702.t1 AT2G04880 55.932 59 25 1 159 217 109 166 1.89e-14 72.4
MS.gene030702.t1 AT2G21900 47.253 91 41 4 136 220 80 169 1.80e-19 83.6
MS.gene030702.t1 AT2G23320 47.126 87 41 2 133 218 216 298 8.06e-19 84.0
MS.gene030702.t1 AT4G31550 34.783 161 86 5 81 234 171 319 1.32e-18 83.6
MS.gene030702.t1 AT4G31550 35.404 161 86 5 81 234 171 320 1.42e-18 83.2
MS.gene030702.t1 AT5G43290 50.704 71 35 0 147 217 100 170 1.96e-18 82.0
MS.gene030702.t1 AT5G15130 48.052 77 38 2 143 218 168 243 3.80e-18 83.2
MS.gene030702.t1 AT5G15130 48.052 77 38 2 143 218 210 285 4.40e-18 83.2
MS.gene030702.t1 AT4G30935 54.839 62 28 0 156 217 326 387 8.16e-18 82.0
MS.gene030702.t1 AT4G31800 47.887 71 36 1 159 228 109 179 2.59e-17 78.6
MS.gene030702.t1 AT2G25000 51.667 60 28 1 160 218 102 161 2.67e-17 78.2
MS.gene030702.t1 AT2G25000 51.667 60 28 1 160 218 102 161 2.67e-17 78.2
MS.gene030702.t1 AT4G04450 35.772 123 66 2 96 217 145 255 2.92e-17 80.5
MS.gene030702.t1 AT2G25000 51.667 60 28 1 160 218 124 183 3.64e-17 78.2
MS.gene030702.t1 AT4G31800 51.667 60 28 1 159 217 174 233 5.25e-17 79.0
MS.gene030702.t1 AT2G25000 51.667 60 28 1 160 218 145 204 5.36e-17 78.2
MS.gene030702.t1 AT5G28650 41.379 87 46 2 133 218 238 320 7.93e-17 78.6
MS.gene030702.t1 AT4G04450 35.772 123 66 2 96 217 239 349 8.04e-17 79.3
MS.gene030702.t1 AT2G30590 43.023 86 44 2 133 217 289 370 8.14e-17 79.0
MS.gene030702.t1 AT1G80840 43.678 87 45 3 135 217 117 203 1.16e-16 77.8
MS.gene030702.t1 AT2G24570 41.509 106 52 3 113 217 204 300 2.60e-16 77.0
MS.gene030702.t1 AT1G62300 47.368 76 38 2 143 217 295 369 3.25e-16 77.8
MS.gene030702.t1 AT3G01080 56.140 57 24 1 161 217 205 260 5.01e-16 76.3
MS.gene030702.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.67e-16 77.0
MS.gene030702.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.67e-16 77.0
MS.gene030702.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.67e-16 77.0
MS.gene030702.t1 AT4G22070 47.368 76 38 2 143 217 280 354 5.67e-16 77.0
MS.gene030702.t1 AT3G04670 40.230 87 47 2 133 218 238 320 7.00e-16 75.9
MS.gene030702.t1 AT4G24240 40.230 87 47 2 133 218 257 339 9.58e-16 75.5
MS.gene030702.t1 AT4G01720 38.739 111 55 3 119 217 187 296 2.01e-15 75.1
MS.gene030702.t1 AT1G18860 51.667 60 28 1 159 217 237 296 6.76e-15 73.6
MS.gene030702.t1 AT4G01250 41.463 82 38 3 140 217 110 185 1.20e-14 72.0
MS.gene030702.t1 AT1G68150 39.216 102 53 3 121 217 195 292 1.69e-14 72.0
MS.gene030702.t1 AT1G66550 49.153 59 27 1 161 216 103 161 2.41e-14 70.5
MS.gene030702.t1 AT1G66550 49.153 59 27 1 161 216 108 166 3.43e-14 70.1
MS.gene030702.t1 AT1G66560 49.153 59 27 1 161 216 103 161 4.48e-14 69.7
MS.gene030702.t1 AT3G56400 37.349 83 43 2 143 216 96 178 5.94e-14 70.1
MS.gene030702.t1 AT2G34830 38.636 88 52 2 132 217 185 272 1.87e-13 69.3
MS.gene030702.t1 AT2G34830 38.636 88 52 2 132 217 194 281 1.96e-13 69.3
MS.gene030702.t1 AT5G01900 35.366 82 50 1 138 216 87 168 2.03e-13 68.2
MS.gene030702.t1 AT1G69810 44.156 77 40 3 143 217 128 203 3.24e-13 68.2
MS.gene030702.t1 AT1G29280 44.444 63 34 1 156 217 69 131 3.49e-13 67.4
MS.gene030702.t1 AT1G69810 44.156 77 40 3 143 217 186 261 3.65e-13 68.6
MS.gene030702.t1 AT2G40740 29.787 188 112 7 37 215 54 230 3.76e-13 67.8
MS.gene030702.t1 AT1G30650 38.636 88 52 2 132 217 187 274 4.49e-13 68.2
MS.gene030702.t1 AT2G40740 29.787 188 112 7 37 215 63 239 4.61e-13 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.22e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.24e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.24e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.25e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 400 467 1.30e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.34e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.34e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.40e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.42e-12 67.4
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 1.42e-12 67.4
MS.gene030702.t1 AT1G66600 47.458 59 28 1 160 215 102 160 1.46e-12 65.5
MS.gene030702.t1 AT5G52830 49.123 57 28 1 162 217 166 222 1.48e-12 66.6
MS.gene030702.t1 AT4G12020 44.928 69 37 1 160 228 467 534 2.03e-12 66.6
MS.gene030702.t1 AT4G23550 44.262 61 33 1 158 217 137 197 2.07e-12 65.9
MS.gene030702.t1 AT5G22570 46.552 58 28 1 162 216 111 168 1.10e-11 63.5
MS.gene030702.t1 AT1G80590 44.828 58 29 1 162 216 86 143 1.52e-11 62.4
MS.gene030702.t1 AT2G46400 36.471 85 51 1 134 215 77 161 2.21e-11 62.8
MS.gene030702.t1 AT5G24110 39.759 83 38 2 159 229 111 193 3.00e-11 62.4
MS.gene030702.t1 AT2G40750 41.667 72 38 2 161 229 152 222 7.95e-11 61.2
MS.gene030702.t1 AT5G45050 47.368 57 29 1 162 217 1042 1098 8.12e-11 62.0
MS.gene030702.t1 AT5G45050 47.368 57 29 1 162 217 1181 1237 9.12e-11 62.0
MS.gene030702.t1 AT5G45050 47.368 57 29 1 162 217 1153 1209 9.27e-11 62.0

Find 58 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACCTAACTTTCCCTTCTT+TGG 0.155148 4.3:+9185326 MS.gene030702:CDS
ATATATATATAGGGCAATAT+TGG 0.271320 4.3:+9186081 MS.gene030702:intron
CTCAATCTGACAATTTCTTA+TGG 0.303911 4.3:+9187211 MS.gene030702:CDS
GATCATCATGATAATCATTT+GGG 0.306049 4.3:+9186157 MS.gene030702:CDS
AACCTAACTTTCCCTTCTTT+GGG 0.323054 4.3:+9185327 MS.gene030702:CDS
TTGAGGATTGGTTGTGAGTA+GGG 0.323819 4.3:-9185433 None:intergenic
TTGAGAGTCTTCAAGATCAT+TGG 0.350233 4.3:-9187187 None:intergenic
GAAGGGAAAGTTAGGTTTGT+TGG 0.351164 4.3:-9185321 None:intergenic
GGTTACAAGTGGAGGAAGTA+TGG 0.371030 4.3:+9186286 MS.gene030702:CDS
AGATCATCATGATAATCATT+TGG 0.374995 4.3:+9186156 MS.gene030702:CDS
GAATACCTCACTTCTAGCTT+TGG 0.383644 4.3:+9185465 MS.gene030702:CDS
TTTGAGGATTGGTTGTGAGT+AGG 0.394005 4.3:-9185434 None:intergenic
AAGGGAAAGTTAGGTTTGTT+GGG 0.400880 4.3:-9185320 None:intergenic
AATAATAGTGGTAAAAGAAA+TGG 0.401015 4.3:+9186130 MS.gene030702:CDS
TATGTGGTTATTACCATCCT+TGG 0.403815 4.3:-9187138 None:intergenic
TATATATATAGGGCAATATT+GGG 0.416994 4.3:+9186082 MS.gene030702:intron
AACCCAAAGAAGGGAAAGTT+AGG 0.429367 4.3:-9185329 None:intergenic
GGATCAGATTCCCACACAAA+TGG 0.430482 4.3:+9185284 MS.gene030702:CDS
GATCAGATTCCCACACAAAT+GGG 0.432708 4.3:+9185285 MS.gene030702:CDS
CAACAACTTATTTGAGGTGG+AGG 0.477228 4.3:+9185263 MS.gene030702:CDS
AGTAATTGCATGAATAATAG+TGG 0.478312 4.3:+9186118 MS.gene030702:CDS
GATTGATTGCAACCCAAAGA+AGG 0.483315 4.3:-9185339 None:intergenic
TGTTGACAACAACTTATTTG+AGG 0.484854 4.3:+9185257 MS.gene030702:CDS
CATGAAAATGAAGAAAATGA+AGG 0.488233 4.3:+9186192 MS.gene030702:CDS
TACCTCACTTCTAGCTTTGG+AGG 0.489395 4.3:+9185468 MS.gene030702:CDS
AAAGTTAGGTTTGTTGGGAA+AGG 0.496923 4.3:-9185315 None:intergenic
AGATGTAAGTGAAGAAGCTA+TGG 0.510048 4.3:-9185379 None:intergenic
TACATGTCTTCCTTCATATG+TGG 0.519036 4.3:-9187154 None:intergenic
ATGGTAATAACCACATATGA+AGG 0.520270 4.3:+9187144 MS.gene030702:CDS
CAATGGATCTATGCAAGGAT+AGG 0.526046 4.3:-9185503 None:intergenic
ATGAAAATGAAGAAAATGAA+GGG 0.532779 4.3:+9186193 MS.gene030702:CDS
TGAAGAAGCTATGGAACTGA+AGG 0.544848 4.3:-9185370 None:intergenic
GTCTCACCATGGATTTACAA+TGG 0.548992 4.3:-9185520 None:intergenic
GATGTGGATGTGTTGGATGA+TGG 0.559861 4.3:+9186265 MS.gene030702:CDS
TGACAACAACTTATTTGAGG+TGG 0.569668 4.3:+9185260 MS.gene030702:CDS
AGGAATGAACCCCATTTGTG+TGG 0.571470 4.3:-9185295 None:intergenic
GAAAGAAAGTGAGAGAGCCT+AGG 0.575300 4.3:+9186218 MS.gene030702:CDS
GATCTATGCAAGGATAGGAA+TGG 0.576173 4.3:-9185498 None:intergenic
ATTGATTGCAACCCAAAGAA+GGG 0.576930 4.3:-9185338 None:intergenic
GAGTCTTCAAGATCATTGGA+TGG 0.577891 4.3:-9187183 None:intergenic
ATAGATCCATTGTAAATCCA+TGG 0.578759 4.3:+9185514 MS.gene030702:CDS
GAGTACTGATGTGGATGTGT+TGG 0.603265 4.3:+9186258 MS.gene030702:CDS
TAAAGAACACACAACATCCC+AGG 0.608791 4.3:+9186320 MS.gene030702:CDS
ATTTACAATGGATCTATGCA+AGG 0.612859 4.3:-9185508 None:intergenic
GGAATGAACCCCATTTGTGT+GGG 0.612916 4.3:-9185294 None:intergenic
AGCGCTTAGCTGAAGATCCA+AGG 0.615258 4.3:+9187121 MS.gene030702:CDS
ATCATCATGATAATCATTTG+GGG 0.627967 4.3:+9186158 MS.gene030702:CDS
TGGATGATGGTTACAAGTGG+AGG 0.635586 4.3:+9186278 MS.gene030702:CDS
GACAATTCTCTTGTGTGCAA+CGG 0.637189 4.3:-9187080 None:intergenic
CTTAGCTGAAGATCCAAGGA+TGG 0.650835 4.3:+9187125 MS.gene030702:CDS
TCATCATGATAATCATTTGG+GGG 0.652014 4.3:+9186159 MS.gene030702:CDS
ATATATAGGGCAATATTGGG+AGG 0.658760 4.3:+9186085 MS.gene030702:intron
AATGTCTTGAAGCAAAACCT+AGG 0.659684 4.3:-9186235 None:intergenic
ATCAGATTCCCACACAAATG+GGG 0.662202 4.3:+9185286 MS.gene030702:CDS
TGTTGGATGATGGTTACAAG+TGG 0.666245 4.3:+9186275 MS.gene030702:CDS
TTGTCGTGTAAAGAAACGTG+TGG 0.671845 4.3:+9187098 MS.gene030702:CDS
CAAGACATTGAGTACTGATG+TGG 0.685676 4.3:+9186249 MS.gene030702:CDS
TTCCTCCAAAGCTAGAAGTG+AGG 0.687037 4.3:-9185470 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATATATATAACATTTG+AGG - chr4.3:9186874-9186893 None:intergenic 10.0%
!! TATATATATATAACATTTGA+GGG - chr4.3:9186873-9186892 None:intergenic 10.0%
!!! TTTTCATTTTTAACTTTTTT+TGG - chr4.3:9185583-9185602 None:intergenic 10.0%
!! GATGAAAAAAATAATAATGA+AGG - chr4.3:9186684-9186703 None:intergenic 15.0%
!! TATATCAACTAAAAATTCAA+GGG + chr4.3:9186343-9186362 MS.gene030702:intron 15.0%
!!! TATTTTAGCTAATTAGTTAA+TGG + chr4.3:9185737-9185756 MS.gene030702:intron 15.0%
!! AAAATAAATTGAAGTAGCAA+CGG - chr4.3:9185723-9185742 None:intergenic 20.0%
!! AAATAATAATGAAGGAAAGA+AGG - chr4.3:9186676-9186695 None:intergenic 20.0%
!! AATAATAATGAAGGAAAGAA+GGG - chr4.3:9186675-9186694 None:intergenic 20.0%
!! AATAATAGTGGTAAAAGAAA+TGG + chr4.3:9186130-9186149 MS.gene030702:CDS 20.0%
!! ACATCAAATTTGGTAAAATA+TGG - chr4.3:9185641-9185660 None:intergenic 20.0%
!! ATATATATATAGGGCAATAT+TGG + chr4.3:9186081-9186100 MS.gene030702:intron 20.0%
!! ATGAAAATGAAAATTAGAGA+CGG + chr4.3:9185596-9185615 MS.gene030702:intron 20.0%
!! ATGAAAATGAAGAAAATGAA+GGG + chr4.3:9186193-9186212 MS.gene030702:CDS 20.0%
!! ATTATATGAGACAATTAACT+TGG - chr4.3:9187032-9187051 None:intergenic 20.0%
!! GTATATCAACTAAAAATTCA+AGG + chr4.3:9186342-9186361 MS.gene030702:intron 20.0%
!! TATATATATAGGGCAATATT+GGG + chr4.3:9186082-9186101 MS.gene030702:intron 20.0%
!!! AATTTTTAGTTGATATACCT+GGG - chr4.3:9186340-9186359 None:intergenic 20.0%
!!! ATTAATTCTTTGTGTTTTGA+AGG + chr4.3:9186964-9186983 MS.gene030702:intron 20.0%
!!! GTTTTTAACGTACTTTATTT+TGG + chr4.3:9186991-9187010 MS.gene030702:intron 20.0%
! AGATCATCATGATAATCATT+TGG + chr4.3:9186156-9186175 MS.gene030702:CDS 25.0%
! AGTAATTGCATGAATAATAG+TGG + chr4.3:9186118-9186137 MS.gene030702:CDS 25.0%
! ATCATCATGATAATCATTTG+GGG + chr4.3:9186158-9186177 MS.gene030702:CDS 25.0%
! ATGGATACTGTAATATTTAG+AGG - chr4.3:9186512-9186531 None:intergenic 25.0%
! ATGGTCAAATGTAGTTATTA+TGG + chr4.3:9186537-9186556 MS.gene030702:intron 25.0%
! ATTACAGTATCCATGAAAAA+TGG + chr4.3:9186518-9186537 MS.gene030702:intron 25.0%
! CATGAAAATGAAGAAAATGA+AGG + chr4.3:9186192-9186211 MS.gene030702:CDS 25.0%
! GAGACGGAAAAATTAATATT+CGG + chr4.3:9185612-9185631 MS.gene030702:intron 25.0%
! GATCATCATGATAATCATTT+GGG + chr4.3:9186157-9186176 MS.gene030702:CDS 25.0%
! TACTGTAATATTTAGAGGTA+CGG - chr4.3:9186507-9186526 None:intergenic 25.0%
! TGGTCAAATGTAGTTATTAT+GGG + chr4.3:9186538-9186557 MS.gene030702:intron 25.0%
!! ATATGCAAAAGAAACTTGTT+CGG + chr4.3:9186800-9186819 MS.gene030702:intron 25.0%
!! CTTCATTTTCTTCATTTTCA+TGG - chr4.3:9186194-9186213 None:intergenic 25.0%
!!! ACTGATTAGCTTTAATTTAC+TGG + chr4.3:9186707-9186726 MS.gene030702:intron 25.0%
!!! AGGTATTCTTTTGATTTTTG+AGG - chr4.3:9185453-9185472 None:intergenic 25.0%
!!! GAATTTTTAGTTGATATACC+TGG - chr4.3:9186341-9186360 None:intergenic 25.0%
!!! TTCTTTTGATTTTTGAGGAT+TGG - chr4.3:9185448-9185467 None:intergenic 25.0%
AATAGCCATACATCACATAA+AGG - chr4.3:9186943-9186962 None:intergenic 30.0%
AGAGAGAACATATGTAAGTT+TGG - chr4.3:9186640-9186659 None:intergenic 30.0%
ATAGATCCATTGTAAATCCA+TGG + chr4.3:9185514-9185533 MS.gene030702:CDS 30.0%
ATGGTAATAACCACATATGA+AGG + chr4.3:9187144-9187163 MS.gene030702:CDS 30.0%
ATTTACAATGGATCTATGCA+AGG - chr4.3:9185511-9185530 None:intergenic 30.0%
CTAATGTAATCTCTAAGTGT+TGG - chr4.3:9185666-9185685 None:intergenic 30.0%
CTATATATAGATTGTCTGAC+GGG + chr4.3:9186035-9186054 MS.gene030702:intron 30.0%
CTCAATCTGACAATTTCTTA+TGG + chr4.3:9187211-9187230 MS.gene030702:CDS 30.0%
GAGAGAACATATGTAAGTTT+GGG - chr4.3:9186639-9186658 None:intergenic 30.0%
GCTATATATAGATTGTCTGA+CGG + chr4.3:9186034-9186053 MS.gene030702:intron 30.0%
GGTCAAATGTAGTTATTATG+GGG + chr4.3:9186539-9186558 MS.gene030702:intron 30.0%
TCATCATGATAATCATTTGG+GGG + chr4.3:9186159-9186178 MS.gene030702:CDS 30.0%
TGTTGACAACAACTTATTTG+AGG + chr4.3:9185257-9185276 MS.gene030702:CDS 30.0%
!! CACAGTTGGCAAATTTTAAT+TGG + chr4.3:9185805-9185824 MS.gene030702:intron 30.0%
!! CTACATTTGACCATTTTTCA+TGG - chr4.3:9186531-9186550 None:intergenic 30.0%
!! TAGCTTTAATTTACTGGCTT+CGG + chr4.3:9186713-9186732 MS.gene030702:intron 30.0%
!!! AGAATTTTTCAAGACACAGT+TGG + chr4.3:9185791-9185810 MS.gene030702:intron 30.0%
AAACCTAACTTTCCCTTCTT+TGG + chr4.3:9185326-9185345 MS.gene030702:CDS 35.0%
AACCTAACTTTCCCTTCTTT+GGG + chr4.3:9185327-9185346 MS.gene030702:CDS 35.0%
AATGTCTTGAAGCAAAACCT+AGG - chr4.3:9186238-9186257 None:intergenic 35.0%
AGATGTAAGTGAAGAAGCTA+TGG - chr4.3:9185382-9185401 None:intergenic 35.0%
ATATATAGGGCAATATTGGG+AGG + chr4.3:9186085-9186104 MS.gene030702:intron 35.0%
ATTGATTGCAACCCAAAGAA+GGG - chr4.3:9185341-9185360 None:intergenic 35.0%
CAAATGTAGTTATTATGGGG+TGG + chr4.3:9186542-9186561 MS.gene030702:intron 35.0%
TACATGTCTTCCTTCATATG+TGG - chr4.3:9187157-9187176 None:intergenic 35.0%
TATGTGGTTATTACCATCCT+TGG - chr4.3:9187141-9187160 None:intergenic 35.0%
TGACAACAACTTATTTGAGG+TGG + chr4.3:9185260-9185279 MS.gene030702:CDS 35.0%
TTGAGAGTCTTCAAGATCAT+TGG - chr4.3:9187190-9187209 None:intergenic 35.0%
TTGCATATGCATGTAGTGAA+AGG - chr4.3:9186788-9186807 None:intergenic 35.0%
! AAGGGAAAGTTAGGTTTGTT+GGG - chr4.3:9185323-9185342 None:intergenic 35.0%
! AGTGTTGGAGACATCAAATT+TGG - chr4.3:9185651-9185670 None:intergenic 35.0%
!! AAAGTTAGGTTTGTTGGGAA+AGG - chr4.3:9185318-9185337 None:intergenic 35.0%
!! AGCTTTAATTTACTGGCTTC+GGG + chr4.3:9186714-9186733 MS.gene030702:intron 35.0%
!!! GAATTGTTTTTGTCTCACCA+TGG - chr4.3:9185534-9185553 None:intergenic 35.0%
AACCCAAAGAAGGGAAAGTT+AGG - chr4.3:9185332-9185351 None:intergenic 40.0%
AGGAAAAGTGATCACATGTG+AGG - chr4.3:9186913-9186932 None:intergenic 40.0%
ATCAGATTCCCACACAAATG+GGG + chr4.3:9185286-9185305 MS.gene030702:CDS 40.0%
ATGTAGTTATTATGGGGTGG+AGG + chr4.3:9186545-9186564 MS.gene030702:intron 40.0%
CAATGGATCTATGCAAGGAT+AGG - chr4.3:9185506-9185525 None:intergenic 40.0%
CTATTTGCCACAATTCAAGG+AGG - chr4.3:9185867-9185886 None:intergenic 40.0%
GAAGGGAAAGTTAGGTTTGT+TGG - chr4.3:9185324-9185343 None:intergenic 40.0%
GACAATTCTCTTGTGTGCAA+CGG - chr4.3:9187083-9187102 None:intergenic 40.0%
GAGTCTTCAAGATCATTGGA+TGG - chr4.3:9187186-9187205 None:intergenic 40.0%
GATCAGATTCCCACACAAAT+GGG + chr4.3:9185285-9185304 MS.gene030702:CDS 40.0%
GATCTATGCAAGGATAGGAA+TGG - chr4.3:9185501-9185520 None:intergenic 40.0%
GATTGATTGCAACCCAAAGA+AGG - chr4.3:9185342-9185361 None:intergenic 40.0%
GCACTATTTGCCACAATTCA+AGG - chr4.3:9185870-9185889 None:intergenic 40.0%
GTCTCACCATGGATTTACAA+TGG - chr4.3:9185523-9185542 None:intergenic 40.0%
GTGGACCTTTATGTGATGTA+TGG + chr4.3:9186935-9186954 MS.gene030702:intron 40.0%
TAAAGAACACACAACATCCC+AGG + chr4.3:9186320-9186339 MS.gene030702:CDS 40.0%
TAATGAAGGAAAGAAGGGTG+TGG - chr4.3:9186670-9186689 None:intergenic 40.0%
TGAAGAAGCTATGGAACTGA+AGG - chr4.3:9185373-9185392 None:intergenic 40.0%
TGTGGCTGAAAAATAGGAAG+TGG - chr4.3:9185844-9185863 None:intergenic 40.0%
TTGTCGTGTAAAGAAACGTG+TGG + chr4.3:9187098-9187117 MS.gene030702:CDS 40.0%
! CAACAACTTATTTGAGGTGG+AGG + chr4.3:9185263-9185282 MS.gene030702:CDS 40.0%
! GTTTGGGACACAATGAATCA+AGG - chr4.3:9186623-9186642 None:intergenic 40.0%
! TGTTGGATGATGGTTACAAG+TGG + chr4.3:9186275-9186294 MS.gene030702:CDS 40.0%
!! ATGTGATCACTTTTCCTAGG+TGG + chr4.3:9186916-9186935 MS.gene030702:intron 40.0%
!! CAAGACATTGAGTACTGATG+TGG + chr4.3:9186249-9186268 MS.gene030702:CDS 40.0%
!! CACATGTGATCACTTTTCCT+AGG + chr4.3:9186913-9186932 MS.gene030702:intron 40.0%
!! GAATACCTCACTTCTAGCTT+TGG + chr4.3:9185465-9185484 MS.gene030702:CDS 40.0%
!! TTAATTTACTGGCTTCGGGA+AGG + chr4.3:9186718-9186737 MS.gene030702:intron 40.0%
!! TTGAGGATTGGTTGTGAGTA+GGG - chr4.3:9185436-9185455 None:intergenic 40.0%
!! TTTGAGGATTGGTTGTGAGT+AGG - chr4.3:9185437-9185456 None:intergenic 40.0%
AGGAATGAACCCCATTTGTG+TGG - chr4.3:9185298-9185317 None:intergenic 45.0%
CATCACATAAAGGTCCACCT+AGG - chr4.3:9186933-9186952 None:intergenic 45.0%
CTTAGCTGAAGATCCAAGGA+TGG + chr4.3:9187125-9187144 MS.gene030702:CDS 45.0%
GAAAGAAAGTGAGAGAGCCT+AGG + chr4.3:9186218-9186237 MS.gene030702:CDS 45.0%
GATGTGGATGTGTTGGATGA+TGG + chr4.3:9186265-9186284 MS.gene030702:CDS 45.0%
GGAATGAACCCCATTTGTGT+GGG - chr4.3:9185297-9185316 None:intergenic 45.0%
GGATCAGATTCCCACACAAA+TGG + chr4.3:9185284-9185303 MS.gene030702:CDS 45.0%
GGTTACAAGTGGAGGAAGTA+TGG + chr4.3:9186286-9186305 MS.gene030702:CDS 45.0%
TTCCTCCAAAGCTAGAAGTG+AGG - chr4.3:9185473-9185492 None:intergenic 45.0%
! AGGAGGTGTGGCTGAAAAAT+AGG - chr4.3:9185850-9185869 None:intergenic 45.0%
! TGGATGATGGTTACAAGTGG+AGG + chr4.3:9186278-9186297 MS.gene030702:CDS 45.0%
!! GAGTACTGATGTGGATGTGT+TGG + chr4.3:9186258-9186277 MS.gene030702:CDS 45.0%
!! TACCTCACTTCTAGCTTTGG+AGG + chr4.3:9185468-9185487 MS.gene030702:CDS 45.0%
!! TTCATATATATATATATATA+GGG + chr4.3:9186072-9186091 MS.gene030702:intron 5.0%
!! TTTCATATATATATATATAT+AGG + chr4.3:9186071-9186090 MS.gene030702:intron 5.0%
AGCCACACCTCCTTGAATTG+TGG + chr4.3:9185857-9185876 MS.gene030702:intron 50.0%
AGCGCTTAGCTGAAGATCCA+AGG + chr4.3:9187121-9187140 MS.gene030702:CDS 50.0%
TGCCACAATTCAAGGAGGTG+TGG - chr4.3:9185862-9185881 None:intergenic 50.0%
! GGAAAGAAGGGTGTGGAGAT+TGG - chr4.3:9186663-9186682 None:intergenic 50.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 9185243 9187236 9185243 ID=MS.gene030702
chr4.3 mRNA 9185243 9187236 9185243 ID=MS.gene030702.t1;Parent=MS.gene030702
chr4.3 exon 9185243 9185535 9185243 ID=MS.gene030702.t1.exon1;Parent=MS.gene030702.t1
chr4.3 CDS 9185243 9185535 9185243 ID=cds.MS.gene030702.t1;Parent=MS.gene030702.t1
chr4.3 exon 9186093 9186341 9186093 ID=MS.gene030702.t1.exon2;Parent=MS.gene030702.t1
chr4.3 CDS 9186093 9186341 9186093 ID=cds.MS.gene030702.t1;Parent=MS.gene030702.t1
chr4.3 exon 9187071 9187236 9187071 ID=MS.gene030702.t1.exon3;Parent=MS.gene030702.t1
chr4.3 CDS 9187071 9187236 9187071 ID=cds.MS.gene030702.t1;Parent=MS.gene030702.t1
Gene Sequence

>MS.gene030702

ATGTCTCAAATTATTGTTGACAACAACTTATTTGAGGTGGAGGATCAGATTCCCACACAAATGGGGTTCATTCCTTTCCCAACAAACCTAACTTTCCCTTCTTTGGGTTGCAATCAATCTTTGAAAGCCTTCAGTTCCATAGCTTCTTCACTTACATCTGAATCAGATTCTACATCAAATCTAACACAAACCCTACTCACAACCAATCCTCAAAAATCAAAAGAATACCTCACTTCTAGCTTTGGAGGAAGTACTCCATTCCTATCCTTGCATAGATCCATTGTAAATCCATGGTGAGACAAAAACAATTCAATTCTCATATTTGTTTTATCATGTACCAAAAAAAGTTAAAAATGAAAATGAAAATTAGAGACGGAAAAATTAATATTCGGTTACCATATTTTACCAAATTTGATGTCTCCAACACTTAGAGATTACATTAGAGACATATTTCGTATTTTTTTCGTTTTTAAATTTCCGTTGCTACTTCAATTTATTTTAGCTAATTAGTTAATGGAAAAAGCTACTTTTCAAGAAAAATAGCTTCAAGAATTTTTCAAGACACAGTTGGCAAATTTTAATTGGATGATTTATTTGTCCACTTCCTATTTTTCAGCCACACCTCCTTGAATTGTGGCAAATAGTGCATTGTGATTGACTATTCTTTATTCTTGAAGAATTCTTGATGTTATTTTTCTAGAGATATAGCATTGCTCTTAGTTAATTAACTGTTTTTTCTTAATCTTGCTAAAGAGATGCTATTGCTTTTCTTAAAAAAAAGAGATGCTATTGCTATATATAGATTGTCTGACGGGTGTTGTAAATTTGTTTCATATATATATATATATAGGGCAATATTGGGAGGAGAAGTAATAAGTAATTGCATGAATAATAGTGGTAAAAGAAATGGAGTAGATCATCATGATAATCATTTGGGGGTTTCTGCTACCATGAAAATGAAGAAAATGAAGGGAAGAAAGAAAGTGAGAGAGCCTAGGTTTTGCTTCAAGACATTGAGTACTGATGTGGATGTGTTGGATGATGGTTACAAGTGGAGGAAGTATGGACAAAAAGTTGTAAAGAACACACAACATCCCAGGTATATCAACTAAAAATTCAAGGGTTCTCTTTTTTTGTCTTACTTTGATAATTACTCAATTAATGTTGTAATAATTGTCACATTTCATTTGAAAAAAAAAAAATCAAAAAGTTTGTTGCTTTTAATTTTAATATAGTTTTAATTGATTTTTTTTTTTTCTAACCGTACCTCTAAATATTACAGTATCCATGAAAAATGGTCAAATGTAGTTATTATGGGGTGGAGGAAGTGATAATTTGAAAGAATTAATATATTTGATTTGATACTATATATTGAAACCTTGATTCATTGTGTCCCAAACTTACATATGTTCTCTCTCCAATCTCCACACCCTTCTTTCCTTCATTATTATTTTTTTCATCACAACTGATTAGCTTTAATTTACTGGCTTCGGGAAGGTTTTAATATTTCTCTGAGTAATAACGTAAAGATAATTAAAGATTCCTTTCACTACATGCATATGCAAAAGAAACTTGTTCGGAATGATACTAATTTGTCAATGTTATGAGTTATGACTAATAATTATGACCCTCAAATGTTATATATATATATATATATATATATATATCCTCACATGTGATCACTTTTCCTAGGTGGACCTTTATGTGATGTATGGCTATTGATTAATTCTTTGTGTTTTGAAGGTTTTGTTTTTAACGTACTTTATTTTGGACTGCTGATTAATTACCAAGTTAATTGTCTCATATAATGAATATTAAAAATGTGTAGAAGCTATTACCGTTGCACACAAGAGAATTGTCGTGTAAAGAAACGTGTGGAGCGCTTAGCTGAAGATCCAAGGATGGTAATAACCACATATGAAGGAAGACATGTACATTCTCCATCCAATGATCTTGAAGACTCTCAAACTCAATCTGACAATTTCTTATGGTAG
Protein sequence

>MS.gene030702.t1

MSQIIVDNNLFEVEDQIPTQMGFIPFPTNLTFPSLGCNQSLKAFSSIASSLTSESDSTSNLTQTLLTTNPQKSKEYLTSSFGGSTPFLSLHRSIVNPWAILGGEVISNCMNNSGKRNGVDHHDNHLGVSATMKMKKMKGRKKVREPRFCFKTLSTDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQENCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQTQSDNFLW