Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030908.t1 | XP_024629307.1 | 97.7 | 176 | 4 | 0 | 1 | 176 | 1 | 176 | 4.90E-39 | 171 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030908.t1 | P94077 | 75.4 | 187 | 32 | 4 | 1 | 176 | 6 | 189 | 7.4e-20 | 98.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030908.t1 | G7L9L6 | 97.7 | 176 | 4 | 0 | 1 | 176 | 1 | 176 | 3.5e-39 | 171.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene030908.t1 | TF | C2C2-LSD |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030908.t1 | MTR_8g089310 | 97.727 | 176 | 4 | 0 | 1 | 176 | 48 | 223 | 1.67e-124 | 349 |
| MS.gene030908.t1 | MTR_8g089310 | 97.727 | 176 | 4 | 0 | 1 | 176 | 14 | 189 | 3.05e-124 | 347 |
| MS.gene030908.t1 | MTR_8g089310 | 97.727 | 176 | 4 | 0 | 1 | 176 | 1 | 176 | 4.54e-124 | 347 |
| MS.gene030908.t1 | MTR_2g047838 | 71.508 | 179 | 42 | 2 | 1 | 176 | 1 | 173 | 4.43e-87 | 253 |
| MS.gene030908.t1 | MTR_4g098500 | 71.681 | 113 | 32 | 0 | 2 | 114 | 5 | 117 | 7.17e-57 | 175 |
| MS.gene030908.t1 | MTR_4g098500 | 71.681 | 113 | 32 | 0 | 2 | 114 | 31 | 143 | 4.73e-56 | 174 |
| MS.gene030908.t1 | MTR_4g088850 | 50.633 | 79 | 39 | 0 | 41 | 119 | 40 | 118 | 7.81e-24 | 91.3 |
| MS.gene030908.t1 | MTR_4g088850 | 42.105 | 76 | 43 | 1 | 3 | 78 | 41 | 115 | 4.10e-11 | 58.2 |
| MS.gene030908.t1 | MTR_4g088850 | 50.000 | 76 | 38 | 0 | 41 | 116 | 40 | 115 | 2.82e-22 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 6 | 189 | 3.51e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 6 | 189 | 3.51e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 1 | 184 | 5.87e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 1 | 184 | 5.87e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 1 | 184 | 5.87e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 1 | 184 | 5.87e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 71.123 | 187 | 40 | 4 | 1 | 176 | 1 | 184 | 5.87e-75 | 223 |
| MS.gene030908.t1 | AT4G20380 | 62.441 | 213 | 40 | 4 | 1 | 176 | 1 | 210 | 8.54e-71 | 213 |
| MS.gene030908.t1 | AT1G32540 | 71.818 | 110 | 31 | 0 | 2 | 111 | 65 | 174 | 1.90e-55 | 173 |
| MS.gene030908.t1 | AT1G32540 | 71.818 | 110 | 31 | 0 | 2 | 111 | 32 | 141 | 1.69e-54 | 170 |
| MS.gene030908.t1 | AT1G32540 | 71.818 | 110 | 31 | 0 | 2 | 111 | 32 | 141 | 1.69e-54 | 170 |
| MS.gene030908.t1 | AT1G32540 | 73.148 | 108 | 29 | 0 | 2 | 109 | 32 | 139 | 6.22e-54 | 169 |
| MS.gene030908.t1 | AT4G20380 | 67.742 | 124 | 29 | 3 | 1 | 113 | 1 | 124 | 6.98e-50 | 157 |
| MS.gene030908.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 65 | 136 | 3.13e-36 | 123 |
| MS.gene030908.t1 | AT1G32540 | 53.030 | 66 | 30 | 1 | 42 | 106 | 66 | 131 | 2.67e-13 | 64.3 |
| MS.gene030908.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 32 | 103 | 1.41e-35 | 120 |
| MS.gene030908.t1 | AT1G32540 | 51.471 | 68 | 32 | 1 | 42 | 108 | 33 | 100 | 2.06e-13 | 63.5 |
| MS.gene030908.t1 | AT1G32540 | 76.389 | 72 | 17 | 0 | 2 | 73 | 32 | 103 | 1.41e-35 | 120 |
| MS.gene030908.t1 | AT1G32540 | 51.471 | 68 | 32 | 1 | 42 | 108 | 33 | 100 | 2.06e-13 | 63.5 |
| MS.gene030908.t1 | AT4G21610 | 51.250 | 80 | 39 | 0 | 40 | 119 | 57 | 136 | 6.70e-24 | 92.0 |
| MS.gene030908.t1 | AT4G21610 | 48.276 | 87 | 42 | 1 | 40 | 123 | 57 | 143 | 6.92e-22 | 86.7 |
Find 50 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGTTTGGCTCTGAGATT+GGG | 0.218971 | 4.3:+11107874 | None:intergenic |
| CCACTGTTTGGCTCTGAGAT+TGG | 0.301892 | 4.3:+11107873 | None:intergenic |
| TGTTGATTCAAGTGGGAAAT+TGG | 0.322882 | 4.3:-11107831 | MS.gene030908:intron |
| ACAACACTCATGTATCCTTA+TGG | 0.360459 | 4.3:-11109273 | MS.gene030908:CDS |
| AATGGAAGGCTTCCAATTCC+TGG | 0.374088 | 4.3:-11108079 | MS.gene030908:CDS |
| AAGTAGCCCATGTCCCTTGC+GGG | 0.401008 | 4.3:-11109305 | MS.gene030908:CDS |
| GGCAGTTCCCGCAAGGGACA+TGG | 0.407023 | 4.3:+11109298 | None:intergenic |
| CAAACATTGGTTGCCCCTCT+AGG | 0.429678 | 4.3:+11111646 | None:intergenic |
| TGAGGTCTATGACCAGGAAT+TGG | 0.430540 | 4.3:+11108067 | None:intergenic |
| ATGTCCCTTGCGGGAACTGC+CGG | 0.445439 | 4.3:-11109296 | MS.gene030908:CDS |
| CCACTTGAATCAACAGACAT+TGG | 0.458263 | 4.3:+11107839 | None:intergenic |
| CAGGTGAGCAATGTTGTTGT+TGG | 0.459951 | 4.3:-11107694 | MS.gene030908:CDS |
| AAACATACCGTTGAAGTAGA+AGG | 0.466644 | 4.3:+11108019 | None:intergenic |
| AGGAATTGGAAGCCTTCCAT+TGG | 0.509054 | 4.3:+11108081 | None:intergenic |
| ATTCCTGGTCATAGACCTCA+TGG | 0.517397 | 4.3:-11108064 | MS.gene030908:CDS |
| AAACATTGGTTGCCCCTCTA+GGG | 0.521552 | 4.3:+11111647 | None:intergenic |
| AACGTTACCTTCTACTTCAA+CGG | 0.522038 | 4.3:-11108026 | MS.gene030908:intron |
| GCATGTTGCTTTACCCTAGA+GGG | 0.526229 | 4.3:-11111660 | MS.gene030908:CDS |
| ACCTCATGGGACAACCGACT+CGG | 0.535011 | 4.3:-11108050 | MS.gene030908:CDS |
| TTGACTGAAGGAGCTCCATA+AGG | 0.536562 | 4.3:+11109258 | None:intergenic |
| AAGGATACATGAGTGTTGTC+CGG | 0.538194 | 4.3:+11109277 | None:intergenic |
| ACTGTTTGGCTCTGAGATTG+GGG | 0.544116 | 4.3:+11107875 | None:intergenic |
| GTTGTCCGGCAGTTCCCGCA+AGG | 0.550249 | 4.3:+11109291 | None:intergenic |
| AACTTGTGTGTAATGGTTGT+AGG | 0.557278 | 4.3:-11111684 | MS.gene030908:CDS |
| GCAGTTCCCGCAAGGGACAT+GGG | 0.560859 | 4.3:+11109299 | None:intergenic |
| CAGAGTCAACTTGTGTGTAA+TGG | 0.563559 | 4.3:-11111691 | MS.gene030908:CDS |
| AGAAGGTAACGTTCCCGAGT+CGG | 0.568975 | 4.3:+11108036 | None:intergenic |
| GATATGTCTCAACTATATTG+TGG | 0.572327 | 4.3:-11111426 | MS.gene030908:CDS |
| CCTCATGGGACAACCGACTC+GGG | 0.573013 | 4.3:-11108049 | MS.gene030908:CDS |
| CCAATGTCTGTTGATTCAAG+TGG | 0.574429 | 4.3:-11107839 | MS.gene030908:CDS |
| GTCCCATGAGGTCTATGACC+AGG | 0.579327 | 4.3:+11108061 | None:intergenic |
| AACTATATTGTGGAGGCTGT+AGG | 0.590469 | 4.3:-11111416 | MS.gene030908:CDS |
| TTGTCCGGCAGTTCCCGCAA+GGG | 0.594632 | 4.3:+11109292 | None:intergenic |
| ATTACCTCTGTTCCTCCACC+TGG | 0.595203 | 4.3:-11111604 | MS.gene030908:intron |
| CATACTGTAAACCTTGCTCC+AGG | 0.599148 | 4.3:-11111342 | MS.gene030908:intron |
| AATATACATTACCTGGAGCA+AGG | 0.599284 | 4.3:+11111331 | None:intergenic |
| CAATGTCTGTTGATTCAAGT+GGG | 0.600952 | 4.3:-11107838 | MS.gene030908:CDS |
| CGTTGGAGCTTACCAGGTGG+AGG | 0.603157 | 4.3:+11111592 | None:intergenic |
| GCACAATGCACAACAAACAT+TGG | 0.623040 | 4.3:+11111633 | None:intergenic |
| ATCTCAGAGCCAAACAGTGG+TGG | 0.625723 | 4.3:-11107870 | MS.gene030908:CDS |
| AGCATGTTGCTTTACCCTAG+AGG | 0.627744 | 4.3:-11111661 | MS.gene030908:CDS |
| CAAACAGCACATTTGACTGA+AGG | 0.639168 | 4.3:+11109246 | None:intergenic |
| ATGTCTCAACTATATTGTGG+AGG | 0.644670 | 4.3:-11111423 | MS.gene030908:CDS |
| CCCGAGTCGGTTGTCCCATG+AGG | 0.645647 | 4.3:+11108049 | None:intergenic |
| CAAGTAGCCCATGTCCCTTG+CGG | 0.646539 | 4.3:-11109306 | MS.gene030908:CDS |
| CATGTTGCTTTACCCTAGAG+GGG | 0.647362 | 4.3:-11111659 | MS.gene030908:CDS |
| CTTACCAGGTGGAGGAACAG+AGG | 0.665101 | 4.3:+11111600 | None:intergenic |
| TTCCTGGTCATAGACCTCAT+GGG | 0.677943 | 4.3:-11108063 | MS.gene030908:CDS |
| CCAATCTCAGAGCCAAACAG+TGG | 0.689166 | 4.3:-11107873 | MS.gene030908:CDS |
| ACATTGTTAATGTACACACG+CGG | 0.795848 | 4.3:-11111393 | MS.gene030908:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAAAAATAATACTT+TGG | - | chr4.3:11111072-11111091 | MS.gene030908:intron | 10.0% |
| !!! | TAAAATTTAAAATGTTATAC+GGG | - | chr4.3:11108821-11108840 | MS.gene030908:intron | 10.0% |
| !!! | ATTCAACAAGATTTTTTTTT+AGG | + | chr4.3:11109497-11109516 | None:intergenic | 15.0% |
| !!! | TTTTTTTCTAGTTTTGTTTT+TGG | - | chr4.3:11111374-11111393 | MS.gene030908:CDS | 15.0% |
| !! | AAATTATCCTAATCAACTAT+TGG | - | chr4.3:11111038-11111057 | MS.gene030908:intron | 20.0% |
| !! | AACATGTAGTTGTTTATAAA+TGG | + | chr4.3:11109653-11109672 | None:intergenic | 20.0% |
| !! | AATAGTTGATTAGGATAATT+TGG | + | chr4.3:11111039-11111058 | None:intergenic | 20.0% |
| !! | AGTGTTTCATTATTTAATCT+TGG | - | chr4.3:11109808-11109827 | MS.gene030908:intron | 20.0% |
| !! | CTTGAAATCTGATTATAAAA+AGG | - | chr4.3:11110330-11110349 | MS.gene030908:intron | 20.0% |
| !! | GAAATTGAAGATTATTACAA+TGG | + | chr4.3:11108646-11108665 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | - | chr4.3:11111102-11111121 | MS.gene030908:intron | 20.0% |
| !! | TGTAAAATGGAATTCTTTAT+TGG | + | chr4.3:11109963-11109982 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | - | chr4.3:11111101-11111120 | MS.gene030908:intron | 20.0% |
| !!! | AGACTTGTTTAAAATGAATT+TGG | - | chr4.3:11111642-11111661 | MS.gene030908:CDS | 20.0% |
| !!! | ATATTTGCATAATCATTTTC+TGG | - | chr4.3:11109716-11109735 | MS.gene030908:intron | 20.0% |
| !!! | CATTTTGAAACAGATTTTTT+TGG | - | chr4.3:11111174-11111193 | MS.gene030908:intron | 20.0% |
| !!! | CTAAAACAGTTATGTTATTT+AGG | - | chr4.3:11108586-11108605 | MS.gene030908:intron | 20.0% |
| !!! | TATTTGCATAATCATTTTCT+GGG | - | chr4.3:11109717-11109736 | MS.gene030908:intron | 20.0% |
| !!! | TCACACATAGATTATTTTTT+TGG | - | chr4.3:11110613-11110632 | MS.gene030908:intron | 20.0% |
| !!! | TTTAATCTGCGTTTTTAAAT+AGG | - | chr4.3:11110583-11110602 | MS.gene030908:intron | 20.0% |
| !!! | TTTTTTTTAGGAAGAATTGA+TGG | + | chr4.3:11109485-11109504 | None:intergenic | 20.0% |
| ! | AAAAGCAAATATACATTACC+TGG | + | chr4.3:11108045-11108064 | None:intergenic | 25.0% |
| ! | AAACAAACCAATAGTTGATT+AGG | + | chr4.3:11111048-11111067 | None:intergenic | 25.0% |
| ! | AAACAACTACATGTTAATCT+GGG | - | chr4.3:11109658-11109677 | MS.gene030908:intron | 25.0% |
| ! | AACATTGAACACATCTTAAA+GGG | - | chr4.3:11110839-11110858 | MS.gene030908:intron | 25.0% |
| ! | AATTTGGAGACAAAATTTCT+TGG | - | chr4.3:11109261-11109280 | MS.gene030908:CDS | 25.0% |
| ! | ATTATTACAATGGAACACTA+GGG | + | chr4.3:11108636-11108655 | None:intergenic | 25.0% |
| ! | CAATAAAAATAATGACAACC+TGG | - | chr4.3:11109294-11109313 | MS.gene030908:CDS | 25.0% |
| ! | CCAACTTAAAAGAATAAGAT+TGG | - | chr4.3:11110759-11110778 | MS.gene030908:intron | 25.0% |
| ! | GAATAAATCACACTGTAAAA+TGG | + | chr4.3:11109976-11109995 | None:intergenic | 25.0% |
| ! | GAGATTTATTTACGCTAAAA+AGG | - | chr4.3:11108878-11108897 | MS.gene030908:intron | 25.0% |
| ! | GATTATAAAAAGGATCTCAA+GGG | - | chr4.3:11110340-11110359 | MS.gene030908:intron | 25.0% |
| ! | TAAACAACTACATGTTAATC+TGG | - | chr4.3:11109657-11109676 | MS.gene030908:intron | 25.0% |
| ! | TAGTCTTTAATTCTTGTATG+TGG | + | chr4.3:11110273-11110292 | None:intergenic | 25.0% |
| ! | TGAGAACATTAGAGTTATAA+TGG | - | chr4.3:11108931-11108950 | MS.gene030908:intron | 25.0% |
| ! | TGATTATAAAAAGGATCTCA+AGG | - | chr4.3:11110339-11110358 | MS.gene030908:intron | 25.0% |
| ! | TTATTTACGCTAAAAAGGAT+GGG | - | chr4.3:11108883-11108902 | MS.gene030908:intron | 25.0% |
| ! | TTGAACAAAGCAAGAAAATA+AGG | + | chr4.3:11108787-11108806 | None:intergenic | 25.0% |
| ! | TTGCTAAATAAGATTGCTAA+TGG | - | chr4.3:11108675-11108694 | MS.gene030908:intron | 25.0% |
| ! | TTTATTTACGCTAAAAAGGA+TGG | - | chr4.3:11108882-11108901 | MS.gene030908:intron | 25.0% |
| !! | AGTCACTGAATAATTTCTTT+TGG | - | chr4.3:11108711-11108730 | MS.gene030908:intron | 25.0% |
| !! | CAGCTAATGTTTTGTAAATT+TGG | - | chr4.3:11109245-11109264 | MS.gene030908:CDS | 25.0% |
| !! | CTACAGAATTTTGTTAATCT+GGG | - | chr4.3:11110177-11110196 | MS.gene030908:intron | 25.0% |
| !! | TCTACAGAATTTTGTTAATC+TGG | - | chr4.3:11110176-11110195 | MS.gene030908:intron | 25.0% |
| !!! | CCAATCTTATTCTTTTAAGT+TGG | + | chr4.3:11110762-11110781 | None:intergenic | 25.0% |
| !!! | TGTATGTTTTGAACTGTATT+TGG | - | chr4.3:11108296-11108315 | MS.gene030908:intron | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | + | chr4.3:11111163-11111182 | None:intergenic | 25.0% |
| AAATAATGAAACACTGACCT+TGG | + | chr4.3:11109803-11109822 | None:intergenic | 30.0% | |
| AAGAATAAGATTGGAGTCTA+AGG | - | chr4.3:11110768-11110787 | MS.gene030908:intron | 30.0% | |
| AAGTAGCTACAGAATTAGTT+AGG | + | chr4.3:11110506-11110525 | None:intergenic | 30.0% | |
| AAGTGAAGAATCAACACATT+CGG | + | chr4.3:11109523-11109542 | None:intergenic | 30.0% | |
| AATCAAAGAAGACTGAATCA+GGG | + | chr4.3:11108748-11108767 | None:intergenic | 30.0% | |
| CAACATTGAACACATCTTAA+AGG | - | chr4.3:11110838-11110857 | MS.gene030908:intron | 30.0% | |
| CAAGCTTATCAAGAATAAGT+AGG | + | chr4.3:11110698-11110717 | None:intergenic | 30.0% | |
| CAGTATGAAAAAATCAACTC+AGG | + | chr4.3:11111244-11111263 | None:intergenic | 30.0% | |
| GAGGTTTGAAGAGTAATAAA+AGG | + | chr4.3:11109861-11109880 | None:intergenic | 30.0% | |
| GATATGTCTCAACTATATTG+TGG | - | chr4.3:11107940-11107959 | MS.gene030908:intron | 30.0% | |
| GATGTACGAACATTACATAT+AGG | + | chr4.3:11107831-11107850 | None:intergenic | 30.0% | |
| GATTATTACAATGGAACACT+AGG | + | chr4.3:11108637-11108656 | None:intergenic | 30.0% | |
| GTGGTTTAGTATTAGTTAAG+CGG | - | chr4.3:11108092-11108111 | MS.gene030908:intron | 30.0% | |
| TAAAGACTAGTATGAGAGAA+AGG | - | chr4.3:11110284-11110303 | MS.gene030908:intron | 30.0% | |
| TGGTGATTAATAGCATAGAA+AGG | - | chr4.3:11111394-11111413 | MS.gene030908:CDS | 30.0% | |
| TGGTTATAGTAGTAAAGGAA+GGG | + | chr4.3:11110483-11110502 | None:intergenic | 30.0% | |
| TGGTTTAGTATTAGTTAAGC+GGG | - | chr4.3:11108093-11108112 | MS.gene030908:intron | 30.0% | |
| TGGTTTATTTATGTTGGTCA+CGG | - | chr4.3:11108563-11108582 | MS.gene030908:intron | 30.0% | |
| TGTGAGTGGTTTATTTATGT+TGG | - | chr4.3:11108557-11108576 | MS.gene030908:intron | 30.0% | |
| TTAGAGTTATAATGGCTAAG+TGG | - | chr4.3:11108939-11108958 | MS.gene030908:intron | 30.0% | |
| TTAGGTGGTTATAGTAGTAA+AGG | + | chr4.3:11110488-11110507 | None:intergenic | 30.0% | |
| TTAGGTGTTCTTACTTGTAA+TGG | - | chr4.3:11108604-11108623 | MS.gene030908:intron | 30.0% | |
| TTATAATGGCTAAGTGGTTA+TGG | - | chr4.3:11108945-11108964 | MS.gene030908:intron | 30.0% | |
| TTGAACTGTATTTGGATAAG+AGG | - | chr4.3:11108304-11108323 | MS.gene030908:intron | 30.0% | |
| ! | AAAATGCTTTTCCAAAAAGG+TGG | - | chr4.3:11109089-11109108 | MS.gene030908:intron | 30.0% |
| ! | ATGATGTTCTTTTGTATGCA+TGG | - | chr4.3:11108404-11108423 | MS.gene030908:intron | 30.0% |
| ! | GCTAAAATGCTTTTCCAAAA+AGG | - | chr4.3:11109086-11109105 | MS.gene030908:intron | 30.0% |
| ! | TACATGTTAATCTGGGATTA+AGG | - | chr4.3:11109665-11109684 | MS.gene030908:intron | 30.0% |
| ! | TCTGCGTTTTTAAATAGGAA+AGG | - | chr4.3:11110588-11110607 | MS.gene030908:intron | 30.0% |
| !! | GATTCAGTTAATTTGTAGGA+AGG | + | chr4.3:11110460-11110479 | None:intergenic | 30.0% |
| !! | TGAGACTCTAAGTTGATATT+AGG | - | chr4.3:11107885-11107904 | MS.gene030908:intron | 30.0% |
| !! | TTACTTTGATTCCACTTTTG+AGG | - | chr4.3:11108460-11108479 | MS.gene030908:intron | 30.0% |
| !! | TTTTTAGGAAGAATTGATGG+AGG | + | chr4.3:11109482-11109501 | None:intergenic | 30.0% |
| AAACATACCGTTGAAGTAGA+AGG | + | chr4.3:11111350-11111369 | None:intergenic | 35.0% | |
| AACGTTACCTTCTACTTCAA+CGG | - | chr4.3:11111340-11111359 | MS.gene030908:intron | 35.0% | |
| AACTTGTGTGTAATGGTTGT+AGG | - | chr4.3:11107682-11107701 | MS.gene030908:CDS | 35.0% | |
| AATAGAATCAGTTCCTTGAG+TGG | + | chr4.3:11109445-11109464 | None:intergenic | 35.0% | |
| AATATACATTACCTGGAGCA+AGG | + | chr4.3:11108038-11108057 | None:intergenic | 35.0% | |
| ACAACAAATGACCTCAAAAG+TGG | + | chr4.3:11108474-11108493 | None:intergenic | 35.0% | |
| ACAACACTCATGTATCCTTA+TGG | - | chr4.3:11110093-11110112 | MS.gene030908:intron | 35.0% | |
| ACATTGTTAATGTACACACG+CGG | - | chr4.3:11107973-11107992 | MS.gene030908:intron | 35.0% | |
| ATACAAAGCCTCTACAATAG+AGG | + | chr4.3:11109880-11109899 | None:intergenic | 35.0% | |
| ATAGTACTCATCAAGACGAA+CGG | + | chr4.3:11109837-11109856 | None:intergenic | 35.0% | |
| ATGAAATTTCATTCCCGTTG+AGG | - | chr4.3:11110887-11110906 | MS.gene030908:intron | 35.0% | |
| ATGTCTCAACTATATTGTGG+AGG | - | chr4.3:11107943-11107962 | MS.gene030908:intron | 35.0% | |
| ATTGCACACAGATTAAGGAA+TGG | - | chr4.3:11110982-11111001 | MS.gene030908:intron | 35.0% | |
| ATTGGACATCTACAAAAGAC+AGG | + | chr4.3:11111270-11111289 | None:intergenic | 35.0% | |
| CACAACATCAACTTGATCAT+TGG | + | chr4.3:11108534-11108553 | None:intergenic | 35.0% | |
| CAGCACCTCAGTTATAAAAA+AGG | + | chr4.3:11110389-11110408 | None:intergenic | 35.0% | |
| CATCATAATCTACAAACTGC+AGG | + | chr4.3:11108390-11108409 | None:intergenic | 35.0% | |
| CATTGCTTGATCATGGAATA+TGG | - | chr4.3:11108182-11108201 | MS.gene030908:intron | 35.0% | |
| GAATCAAAGAAGACTGAATC+AGG | + | chr4.3:11108749-11108768 | None:intergenic | 35.0% | |
| GGAGATACATTTAAGTCTTC+TGG | - | chr4.3:11110634-11110653 | MS.gene030908:intron | 35.0% | |
| GGTTATAGTAGTAAAGGAAG+GGG | + | chr4.3:11110482-11110501 | None:intergenic | 35.0% | |
| GTGGTTATAGTAGTAAAGGA+AGG | + | chr4.3:11110484-11110503 | None:intergenic | 35.0% | |
| TACAACAGACAAAAGCTCAA+AGG | + | chr4.3:11110913-11110932 | None:intergenic | 35.0% | |
| TAGCATAGAAAGGATGATGT+TGG | - | chr4.3:11111404-11111423 | MS.gene030908:CDS | 35.0% | |
| TAGCTACAGAATTAGTTAGG+TGG | + | chr4.3:11110503-11110522 | None:intergenic | 35.0% | |
| TATTGCTTGCATTTAGTCCA+AGG | - | chr4.3:11109783-11109802 | MS.gene030908:intron | 35.0% | |
| TCTTCAAACCTCTATTGTAG+AGG | - | chr4.3:11109869-11109888 | MS.gene030908:intron | 35.0% | |
| TGTATTTGGATAAGAGGCAA+TGG | - | chr4.3:11108310-11108329 | MS.gene030908:intron | 35.0% | |
| TGTGAAAGGTGAATGTATGT+TGG | - | chr4.3:11109130-11109149 | MS.gene030908:intron | 35.0% | |
| TTCCTTAATCTGTGTGCAAT+TGG | + | chr4.3:11110982-11111001 | None:intergenic | 35.0% | |
| TTTAATAACGAGAACAGCGT+TGG | + | chr4.3:11107794-11107813 | None:intergenic | 35.0% | |
| TTTAGTATTAGTTAAGCGGG+TGG | - | chr4.3:11108096-11108115 | MS.gene030908:intron | 35.0% | |
| TTTATGAGCCTTGGTAAACA+CGG | - | chr4.3:11108497-11108516 | MS.gene030908:intron | 35.0% | |
| ! | CATTTTAAGCTTTGCAGAGA+AGG | + | chr4.3:11108985-11109004 | None:intergenic | 35.0% |
| ! | GAGCTTTTGTCTGTTGTAAA+TGG | - | chr4.3:11110915-11110934 | MS.gene030908:intron | 35.0% |
| ! | TAGTGAAAGGTTTGGTTGTT+TGG | - | chr4.3:11108341-11108360 | MS.gene030908:intron | 35.0% |
| ! | TCTTTCTGAACTGTTAGCTT+TGG | + | chr4.3:11110421-11110440 | None:intergenic | 35.0% |
| ! | TGTCTTTTGTAGATGTCCAA+TGG | - | chr4.3:11111269-11111288 | MS.gene030908:intron | 35.0% |
| ! | TTTTGTAGATGTCCAATGGA+AGG | - | chr4.3:11111273-11111292 | MS.gene030908:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | - | chr4.3:11111200-11111219 | MS.gene030908:intron | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr4.3:11111219-11111200 | None:intergenic | 35.0% |
| !! | AGGGGATTCAGTTAATTTGT+AGG | + | chr4.3:11110464-11110483 | None:intergenic | 35.0% |
| !! | CAATGTCTGTTGATTCAAGT+GGG | - | chr4.3:11111528-11111547 | MS.gene030908:intron | 35.0% |
| !! | CATCTCTTTGAAATGAAGTC+TGG | - | chr4.3:11109555-11109574 | MS.gene030908:intron | 35.0% |
| !! | CTTTCTGAACTGTTAGCTTT+GGG | + | chr4.3:11110420-11110439 | None:intergenic | 35.0% |
| !! | TCAGTTAATTTGTAGGAAGG+CGG | + | chr4.3:11110457-11110476 | None:intergenic | 35.0% |
| !! | TGTTGATTCAAGTGGGAAAT+TGG | - | chr4.3:11111535-11111554 | MS.gene030908:intron | 35.0% |
| !! | TGTTGTGTTTTTATGAGCCT+TGG | - | chr4.3:11108488-11108507 | MS.gene030908:intron | 35.0% |
| !! | TTTCTGAACTGTTAGCTTTG+GGG | + | chr4.3:11110419-11110438 | None:intergenic | 35.0% |
| AAAATCCCGTCTTATGTTCC+TGG | - | chr4.3:11109323-11109342 | MS.gene030908:intron | 40.0% | |
| AAATCCCGTCTTATGTTCCT+GGG | - | chr4.3:11109324-11109343 | MS.gene030908:intron | 40.0% | |
| AACTATATTGTGGAGGCTGT+AGG | - | chr4.3:11107950-11107969 | MS.gene030908:intron | 40.0% | |
| AGCCAATTGCACACAGATTA+AGG | - | chr4.3:11110977-11110996 | MS.gene030908:intron | 40.0% | |
| ATTTACTGCACGATTGGTGT+TGG | - | chr4.3:11109010-11109029 | MS.gene030908:intron | 40.0% | |
| CAAACAGCACATTTGACTGA+AGG | + | chr4.3:11110123-11110142 | None:intergenic | 40.0% | |
| CAGAGTCAACTTGTGTGTAA+TGG | - | chr4.3:11107675-11107694 | MS.gene030908:CDS | 40.0% | |
| CAGTTCAAAACATACACTCG+AGG | + | chr4.3:11108292-11108311 | None:intergenic | 40.0% | |
| CATTCACCTTTCACAAGCAT+AGG | + | chr4.3:11109125-11109144 | None:intergenic | 40.0% | |
| CATTTCAAAGAGATGACGTG+AGG | + | chr4.3:11109550-11109569 | None:intergenic | 40.0% | |
| CCAATAACTGGAATGAGGTT+GGG | - | chr4.3:11109059-11109078 | MS.gene030908:intron | 40.0% | |
| CCACTTGAATCAACAGACAT+TGG | + | chr4.3:11111530-11111549 | None:intergenic | 40.0% | |
| GAAGCTATTTACTGCACGAT+TGG | - | chr4.3:11109004-11109023 | MS.gene030908:intron | 40.0% | |
| GAGAATCCAAAGTTTCCCTA+GGG | + | chr4.3:11110815-11110834 | None:intergenic | 40.0% | |
| GCACAATGCACAACAAACAT+TGG | + | chr4.3:11107736-11107755 | None:intergenic | 40.0% | |
| GGATCCCAATATCTGATAAC+CGG | + | chr4.3:11110741-11110760 | None:intergenic | 40.0% | |
| TAAGCTTTGCAGAGAAGGTT+AGG | + | chr4.3:11108980-11108999 | None:intergenic | 40.0% | |
| TAATCCGTACACGAGGATTT+CGG | + | chr4.3:11108226-11108245 | None:intergenic | 40.0% | |
| TATATGCCCTAGGGAAACTT+TGG | - | chr4.3:11110806-11110825 | MS.gene030908:intron | 40.0% | |
| TCCAATAACTGGAATGAGGT+TGG | - | chr4.3:11109058-11109077 | MS.gene030908:intron | 40.0% | |
| TGAGAATCCAAAGTTTCCCT+AGG | + | chr4.3:11110816-11110835 | None:intergenic | 40.0% | |
| TTGGATAAGAGGCAATGGAA+GGG | - | chr4.3:11108315-11108334 | MS.gene030908:intron | 40.0% | |
| TTTCCCTAGGGCATATAAGT+CGG | + | chr4.3:11110803-11110822 | None:intergenic | 40.0% | |
| TTTGCACACTACGAGATGTT+TGG | - | chr4.3:11109913-11109932 | MS.gene030908:intron | 40.0% | |
| TTTGCTGCATTGCTTGATCA+TGG | - | chr4.3:11108175-11108194 | MS.gene030908:intron | 40.0% | |
| TTTGGATAAGAGGCAATGGA+AGG | - | chr4.3:11108314-11108333 | MS.gene030908:intron | 40.0% | |
| ! | AAGGATACATGAGTGTTGTC+CGG | + | chr4.3:11110092-11110111 | None:intergenic | 40.0% |
| ! | ACATGCCGGTTATCAGATAT+TGG | - | chr4.3:11110733-11110752 | MS.gene030908:intron | 40.0% |
| ! | AGACGGGATTTTATAGTACC+AGG | + | chr4.3:11109315-11109334 | None:intergenic | 40.0% |
| ! | ATACGGGATTCCTTTTGCAT+GGG | - | chr4.3:11108837-11108856 | MS.gene030908:intron | 40.0% |
| ! | CATGCCGGTTATCAGATATT+GGG | - | chr4.3:11110734-11110753 | MS.gene030908:intron | 40.0% |
| ! | GATTTTCTACCACCACTGTT+TGG | + | chr4.3:11111508-11111527 | None:intergenic | 40.0% |
| ! | TATACGGGATTCCTTTTGCA+TGG | - | chr4.3:11108836-11108855 | MS.gene030908:intron | 40.0% |
| ! | TCGTTCAAGTTATCACATGC+CGG | - | chr4.3:11110719-11110738 | MS.gene030908:intron | 40.0% |
| ! | TCTTATTTAGCAACAGCGTC+TGG | + | chr4.3:11108668-11108687 | None:intergenic | 40.0% |
| ! | TTGATGTTGTGACTTGTGAG+TGG | - | chr4.3:11108543-11108562 | MS.gene030908:intron | 40.0% |
| ! | TTTACTGCACGATTGGTGTT+GGG | - | chr4.3:11109011-11109030 | MS.gene030908:intron | 40.0% |
| !! | CCAATGTCTGTTGATTCAAG+TGG | - | chr4.3:11111527-11111546 | MS.gene030908:intron | 40.0% |
| !! | TTAATTTGTAGGAAGGCGGA+AGG | + | chr4.3:11110453-11110472 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | chr4.3:11111204-11111223 | MS.gene030908:intron | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr4.3:11111223-11111204 | None:intergenic | 40.0% |
| !!! | GGCAGCCTTTTTTATAACTG+AGG | - | chr4.3:11110381-11110400 | MS.gene030908:intron | 40.0% |
| AAAAGCTCAAAGGCCTCAAC+GGG | + | chr4.3:11110903-11110922 | None:intergenic | 45.0% | |
| AAAAGGCTGCCCTTTGTTGA+AGG | + | chr4.3:11110372-11110391 | None:intergenic | 45.0% | |
| AAACCCGACTTATATGCCCT+AGG | - | chr4.3:11110796-11110815 | MS.gene030908:intron | 45.0% | |
| AAAGGATGGGTGCTTAGTCT+TGG | - | chr4.3:11108896-11108915 | MS.gene030908:intron | 45.0% | |
| AAAGGCTGCCCTTTGTTGAA+GGG | + | chr4.3:11110371-11110390 | None:intergenic | 45.0% | |
| AACCCGACTTATATGCCCTA+GGG | - | chr4.3:11110797-11110816 | MS.gene030908:intron | 45.0% | |
| AATCAGTTCCTTGAGTGGTG+TGG | + | chr4.3:11109440-11109459 | None:intergenic | 45.0% | |
| AATGACCTTAATGTACCCCC+TGG | + | chr4.3:11108249-11108268 | None:intergenic | 45.0% | |
| AATGGAAGGCTTCCAATTCC+TGG | - | chr4.3:11111287-11111306 | MS.gene030908:intron | 45.0% | |
| ACAATGGAACACTAGGGAAG+AGG | + | chr4.3:11108630-11108649 | None:intergenic | 45.0% | |
| AGAGAAGCAGTCAAATGCAG+TGG | + | chr4.3:11111602-11111621 | None:intergenic | 45.0% | |
| AGGAATTGGAAGCCTTCCAT+TGG | + | chr4.3:11111288-11111307 | None:intergenic | 45.0% | |
| ATCAGATTCCACACCACTCA+AGG | - | chr4.3:11109429-11109448 | MS.gene030908:intron | 45.0% | |
| ATTCCAGTTATTGGAGCCAG+TGG | + | chr4.3:11109053-11109072 | None:intergenic | 45.0% | |
| ATTCCTGGTCATAGACCTCA+TGG | - | chr4.3:11111302-11111321 | MS.gene030908:intron | 45.0% | |
| CAAAAGCTCAAAGGCCTCAA+CGG | + | chr4.3:11110904-11110923 | None:intergenic | 45.0% | |
| CAGGTGAGCAATGTTGTTGT+TGG | - | chr4.3:11111672-11111691 | MS.gene030908:CDS | 45.0% | |
| CATACTGTAAACCTTGCTCC+AGG | - | chr4.3:11108024-11108043 | MS.gene030908:intron | 45.0% | |
| CCCAACCTCATTCCAGTTAT+TGG | + | chr4.3:11109062-11109081 | None:intergenic | 45.0% | |
| CTCTTCCCAGGAACATAAGA+CGG | + | chr4.3:11109332-11109351 | None:intergenic | 45.0% | |
| GCTTGACAGATGAAGCTTAG+TGG | - | chr4.3:11108073-11108092 | MS.gene030908:CDS | 45.0% | |
| GGTGAATGTATGTTGGAGAG+TGG | - | chr4.3:11109137-11109156 | MS.gene030908:intron | 45.0% | |
| TAGTTAAGCGGGTGGCATAT+TGG | - | chr4.3:11108104-11108123 | MS.gene030908:intron | 45.0% | |
| TCTTCCCAGGAACATAAGAC+GGG | + | chr4.3:11109331-11109350 | None:intergenic | 45.0% | |
| TGAGGTCTATGACCAGGAAT+TGG | + | chr4.3:11111302-11111321 | None:intergenic | 45.0% | |
| TGGATAAGAGGCAATGGAAG+GGG | - | chr4.3:11108316-11108335 | MS.gene030908:intron | 45.0% | |
| TGGCTCCAATAACTGGAATG+AGG | - | chr4.3:11109054-11109073 | MS.gene030908:intron | 45.0% | |
| TTCCAGTTATTGGAGCCAGT+GGG | + | chr4.3:11109052-11109071 | None:intergenic | 45.0% | |
| TTCCCTAGGGCATATAAGTC+GGG | + | chr4.3:11110802-11110821 | None:intergenic | 45.0% | |
| TTCCTGGTCATAGACCTCAT+GGG | - | chr4.3:11111303-11111322 | MS.gene030908:intron | 45.0% | |
| TTGACTGAAGGAGCTCCATA+AGG | + | chr4.3:11110111-11110130 | None:intergenic | 45.0% | |
| ! | AAACATTGGTTGCCCCTCTA+GGG | + | chr4.3:11107722-11107741 | None:intergenic | 45.0% |
| ! | AAGGGGGTTAGTGAAAGGTT+TGG | - | chr4.3:11108333-11108352 | MS.gene030908:intron | 45.0% |
| ! | AATGGAAGGGGGTTAGTGAA+AGG | - | chr4.3:11108328-11108347 | MS.gene030908:intron | 45.0% |
| ! | AGGGTTTTCCCCTTCAACAA+AGG | - | chr4.3:11110359-11110378 | MS.gene030908:intron | 45.0% |
| ! | GATTACCAGGGGGTACATTA+AGG | - | chr4.3:11108241-11108260 | MS.gene030908:intron | 45.0% |
| ! | GGGTTTTCCCCTTCAACAAA+GGG | - | chr4.3:11110360-11110379 | MS.gene030908:intron | 45.0% |
| ! | TACGGGATTCCTTTTGCATG+GGG | - | chr4.3:11108838-11108857 | MS.gene030908:intron | 45.0% |
| !! | ACTGTTTGGCTCTGAGATTG+GGG | + | chr4.3:11111494-11111513 | None:intergenic | 45.0% |
| !! | AGCATGTTGCTTTACCCTAG+AGG | - | chr4.3:11107705-11107724 | MS.gene030908:intron | 45.0% |
| !! | CACTGTTTGGCTCTGAGATT+GGG | + | chr4.3:11111495-11111514 | None:intergenic | 45.0% |
| !! | CATGTTGCTTTACCCTAGAG+GGG | - | chr4.3:11107707-11107726 | MS.gene030908:intron | 45.0% |
| !! | GCATGTTGCTTTACCCTAGA+GGG | - | chr4.3:11107706-11107725 | MS.gene030908:intron | 45.0% |
| !! | GGTGCTTAGTCTTGGTAAGT+TGG | - | chr4.3:11108904-11108923 | MS.gene030908:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr4.3:11111203-11111222 | MS.gene030908:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr4.3:11111222-11111203 | None:intergenic | 45.0% |
| !!! | ATAAAATTTAAAATGTTATA+CGG | - | chr4.3:11108820-11108839 | MS.gene030908:intron | 5.0% |
| AAATTTGTCCGCCTCTTCCC+AGG | + | chr4.3:11109344-11109363 | None:intergenic | 50.0% | |
| AAGGCTGCCCTTTGTTGAAG+GGG | + | chr4.3:11110370-11110389 | None:intergenic | 50.0% | |
| AGAAGGTAACGTTCCCGAGT+CGG | + | chr4.3:11111333-11111352 | None:intergenic | 50.0% | |
| ATCTCAGAGCCAAACAGTGG+TGG | - | chr4.3:11111496-11111515 | MS.gene030908:intron | 50.0% | |
| ATGGGGGTCATTTGGCTACT+CGG | - | chr4.3:11108855-11108874 | MS.gene030908:intron | 50.0% | |
| ATTACCTCTGTTCCTCCACC+TGG | - | chr4.3:11107762-11107781 | MS.gene030908:intron | 50.0% | |
| ATTTGTAGGAAGGCGGAAGG+AGG | + | chr4.3:11110450-11110469 | None:intergenic | 50.0% | |
| CAGCCAAACCGTGTTTACCA+AGG | + | chr4.3:11108508-11108527 | None:intergenic | 50.0% | |
| CCAAATGACCCCCATGCAAA+AGG | + | chr4.3:11108850-11108869 | None:intergenic | 50.0% | |
| CCAATCTCAGAGCCAAACAG+TGG | - | chr4.3:11111493-11111512 | MS.gene030908:intron | 50.0% | |
| CCTTTCACAAGCATAGGAGC+CGG | + | chr4.3:11109119-11109138 | None:intergenic | 50.0% | |
| CGTCTTATGTTCCTGGGAAG+AGG | - | chr4.3:11109330-11109349 | MS.gene030908:intron | 50.0% | |
| CGTTCCGAAATCCTCGTGTA+CGG | - | chr4.3:11108219-11108238 | MS.gene030908:intron | 50.0% | |
| CTTATGTTCCTGGGAAGAGG+CGG | - | chr4.3:11109333-11109352 | MS.gene030908:intron | 50.0% | |
| CTTTCACAAGCATAGGAGCC+GGG | + | chr4.3:11109118-11109137 | None:intergenic | 50.0% | |
| GAGCCTTGGTAAACACGGTT+TGG | - | chr4.3:11108502-11108521 | MS.gene030908:intron | 50.0% | |
| GGATAAGAGGCAATGGAAGG+GGG | - | chr4.3:11108317-11108336 | MS.gene030908:intron | 50.0% | |
| GGCATATAAGTCGGGTTTGC+AGG | + | chr4.3:11110794-11110813 | None:intergenic | 50.0% | |
| TACTGATGTTCCTGCAGGGA+TGG | - | chr4.3:11107918-11107937 | MS.gene030908:intron | 50.0% | |
| TAGGACGACGTAGACACGAA+TGG | + | chr4.3:11110679-11110698 | None:intergenic | 50.0% | |
| TCCCTGCAGGAACATCAGTA+CGG | + | chr4.3:11107918-11107937 | None:intergenic | 50.0% | |
| TGAGACATATCCATCCCTGC+AGG | + | chr4.3:11107931-11107950 | None:intergenic | 50.0% | |
| TTTCCAAAAAGGTGGCAGCC+CGG | - | chr4.3:11109097-11109116 | MS.gene030908:intron | 50.0% | |
| TTTGTAGGAAGGCGGAAGGA+GGG | + | chr4.3:11110449-11110468 | None:intergenic | 50.0% | |
| ! | ACCGTACTGATGTTCCTGCA+GGG | - | chr4.3:11107914-11107933 | MS.gene030908:intron | 50.0% |
| ! | ACGGGATTCCTTTTGCATGG+GGG | - | chr4.3:11108839-11108858 | MS.gene030908:intron | 50.0% |
| ! | ATCCTCGTGTACGGATTACC+AGG | - | chr4.3:11108228-11108247 | MS.gene030908:intron | 50.0% |
| ! | CAAACATTGGTTGCCCCTCT+AGG | + | chr4.3:11107723-11107742 | None:intergenic | 50.0% |
| ! | CCTTTTGCATGGGGGTCATT+TGG | - | chr4.3:11108847-11108866 | MS.gene030908:intron | 50.0% |
| ! | TACCGTACTGATGTTCCTGC+AGG | - | chr4.3:11107913-11107932 | MS.gene030908:intron | 50.0% |
| ! | TCCTCGTGTACGGATTACCA+GGG | - | chr4.3:11108229-11108248 | MS.gene030908:intron | 50.0% |
| !! | AACCCACTGGCTCCAATAAC+TGG | - | chr4.3:11109047-11109066 | MS.gene030908:intron | 50.0% |
| !! | CCACTGTTTGGCTCTGAGAT+TGG | + | chr4.3:11111496-11111515 | None:intergenic | 50.0% |
| !! | GAGATTGGGGCATTGACTGT+AGG | + | chr4.3:11111481-11111500 | None:intergenic | 50.0% |
| AAGTAGCCCATGTCCCTTGC+GGG | - | chr4.3:11110061-11110080 | MS.gene030908:intron | 55.0% | |
| ACCTCATGGGACAACCGACT+CGG | - | chr4.3:11111316-11111335 | MS.gene030908:intron | 55.0% | |
| CAAGTAGCCCATGTCCCTTG+CGG | - | chr4.3:11110060-11110079 | MS.gene030908:intron | 55.0% | |
| CCGGCTCCTATGCTTGTGAA+AGG | - | chr4.3:11109116-11109135 | MS.gene030908:intron | 55.0% | |
| CTTACCAGGTGGAGGAACAG+AGG | + | chr4.3:11107769-11107788 | None:intergenic | 55.0% | |
| GTCCCATGAGGTCTATGACC+AGG | + | chr4.3:11111308-11111327 | None:intergenic | 55.0% | |
| GTGAGAAACCACCATCCCGT+CGG | + | chr4.3:11108368-11108387 | None:intergenic | 55.0% | |
| GTTTGGTTGTTTGGCCCGAC+GGG | - | chr4.3:11108350-11108369 | MS.gene030908:intron | 55.0% | |
| TGAGAAACCACCATCCCGTC+GGG | + | chr4.3:11108367-11108386 | None:intergenic | 55.0% | |
| TGGGGGTCATTTGGCTACTC+GGG | - | chr4.3:11108856-11108875 | MS.gene030908:intron | 55.0% | |
| TTGTAGGAAGGCGGAAGGAG+GGG | + | chr4.3:11110448-11110467 | None:intergenic | 55.0% | |
| ! | CCTCGTGTACGGATTACCAG+GGG | - | chr4.3:11108230-11108249 | MS.gene030908:intron | 55.0% |
| ! | CTCGTGTACGGATTACCAGG+GGG | - | chr4.3:11108231-11108250 | MS.gene030908:intron | 55.0% |
| ! | GAACAGCGTTGGAGCTTACC+AGG | + | chr4.3:11107783-11107802 | None:intergenic | 55.0% |
| ! | GGTTTGGTTGTTTGGCCCGA+CGG | - | chr4.3:11108349-11108368 | MS.gene030908:intron | 55.0% |
| ATGTCCCTTGCGGGAACTGC+CGG | - | chr4.3:11110070-11110089 | MS.gene030908:intron | 60.0% | |
| CCCCTGGTAATCCGTACACG+AGG | + | chr4.3:11108233-11108252 | None:intergenic | 60.0% | |
| CGTTGGAGCTTACCAGGTGG+AGG | + | chr4.3:11107777-11107796 | None:intergenic | 60.0% | |
| GCAGTTCCCGCAAGGGACAT+GGG | + | chr4.3:11110070-11110089 | None:intergenic | 60.0% | |
| TGTAGGAAGGCGGAAGGAGG+GGG | + | chr4.3:11110447-11110466 | None:intergenic | 60.0% | |
| TTGTCCGGCAGTTCCCGCAA+GGG | + | chr4.3:11110077-11110096 | None:intergenic | 60.0% | |
| ! | ATTGGAGCCAGTGGGTTCGC+AGG | + | chr4.3:11109044-11109063 | None:intergenic | 60.0% |
| ! | CAGCGTTGGAGCTTACCAGG+TGG | + | chr4.3:11107780-11107799 | None:intergenic | 60.0% |
| ! | CCTCATGGGACAACCGACTC+GGG | - | chr4.3:11111317-11111336 | MS.gene030908:intron | 60.0% |
| ! | TTGGAGCCAGTGGGTTCGCA+GGG | + | chr4.3:11109043-11109062 | None:intergenic | 60.0% |
| AGCAAGCCCTGCGAACCCAC+TGG | - | chr4.3:11109034-11109053 | MS.gene030908:intron | 65.0% | |
| CCCGAGTCGGTTGTCCCATG+AGG | + | chr4.3:11111320-11111339 | None:intergenic | 65.0% | |
| GGCAGTTCCCGCAAGGGACA+TGG | + | chr4.3:11110071-11110090 | None:intergenic | 65.0% | |
| GGTTGTTTGGCCCGACGGGA+TGG | - | chr4.3:11108354-11108373 | MS.gene030908:intron | 65.0% | |
| GTTGTCCGGCAGTTCCCGCA+AGG | + | chr4.3:11110078-11110097 | None:intergenic | 65.0% | |
| TGTTTGGCCCGACGGGATGG+TGG | - | chr4.3:11108357-11108376 | MS.gene030908:intron | 65.0% | |
| ! | GAGCCGGGCTGCCACCTTTT+TGG | + | chr4.3:11109103-11109122 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 11107672 | 11111716 | 11107672 | ID=MS.gene030908 |
| chr4.3 | mRNA | 11107672 | 11111716 | 11107672 | ID=MS.gene030908.t1;Parent=MS.gene030908 |
| chr4.3 | exon | 11111605 | 11111716 | 11111605 | ID=MS.gene030908.t1.exon1;Parent=MS.gene030908.t1 |
| chr4.3 | CDS | 11111605 | 11111716 | 11111605 | ID=cds.MS.gene030908.t1;Parent=MS.gene030908.t1 |
| chr4.3 | exon | 11111343 | 11111453 | 11111343 | ID=MS.gene030908.t1.exon2;Parent=MS.gene030908.t1 |
| chr4.3 | CDS | 11111343 | 11111453 | 11111343 | ID=cds.MS.gene030908.t1;Parent=MS.gene030908.t1 |
| chr4.3 | exon | 11109224 | 11109336 | 11109224 | ID=MS.gene030908.t1.exon3;Parent=MS.gene030908.t1 |
| chr4.3 | CDS | 11109224 | 11109336 | 11109224 | ID=cds.MS.gene030908.t1;Parent=MS.gene030908.t1 |
| chr4.3 | exon | 11108027 | 11108107 | 11108027 | ID=MS.gene030908.t1.exon4;Parent=MS.gene030908.t1 |
| chr4.3 | CDS | 11108027 | 11108107 | 11108027 | ID=cds.MS.gene030908.t1;Parent=MS.gene030908.t1 |
| chr4.3 | exon | 11107832 | 11107903 | 11107832 | ID=MS.gene030908.t1.exon5;Parent=MS.gene030908.t1 |
| chr4.3 | CDS | 11107832 | 11107903 | 11107832 | ID=cds.MS.gene030908.t1;Parent=MS.gene030908.t1 |
| chr4.3 | exon | 11107672 | 11107713 | 11107672 | ID=MS.gene030908.t1.exon6;Parent=MS.gene030908.t1 |
| chr4.3 | CDS | 11107672 | 11107713 | 11107672 | ID=cds.MS.gene030908.t1;Parent=MS.gene030908.t1 |
| Gene Sequence |
| Protein sequence |
