AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030910.t1 MTR_8g089260 94.354 1045 53 1 24 1062 1 1045 0.0 1971
MS.gene030910.t1 MTR_2g047130 60.207 1063 357 15 1 1059 1 1001 0.0 1182
MS.gene030910.t1 MTR_2g047130 60.361 1052 355 14 12 1059 5 998 0.0 1175
MS.gene030910.t1 MTR_1g078070 56.915 564 236 2 37 597 131 690 0.0 670
MS.gene030910.t1 MTR_1g078070 28.916 415 240 10 667 1059 846 1227 5.13e-41 165
MS.gene030910.t1 MTR_1g078070 56.915 564 236 2 37 597 131 690 0.0 669
MS.gene030910.t1 MTR_1g078070 27.350 234 136 7 667 878 846 1067 1.28e-14 79.3
MS.gene030910.t1 MTR_7g097070 43.130 575 311 7 38 598 99 671 5.99e-149 466
MS.gene030910.t1 MTR_5g010300 38.702 447 223 6 159 591 288 697 8.54e-86 305
MS.gene030910.t1 MTR_5g010300 50.000 74 33 1 51 124 23 92 3.86e-14 77.8
MS.gene030910.t1 MTR_5g010300 38.702 447 223 6 159 591 288 697 8.86e-86 305
MS.gene030910.t1 MTR_5g010300 50.000 74 33 1 51 124 23 92 4.42e-14 77.8
MS.gene030910.t1 MTR_5g010300 38.702 447 223 6 159 591 288 697 9.03e-86 305
MS.gene030910.t1 MTR_5g010300 50.000 74 33 1 51 124 23 92 3.83e-14 78.2
MS.gene030910.t1 MTR_5g010300 40.050 397 194 4 159 544 288 651 8.63e-80 287
MS.gene030910.t1 MTR_5g010300 50.000 74 33 1 51 124 23 92 4.94e-14 77.8
MS.gene030910.t1 MTR_5g029370 37.376 404 172 11 53 444 86 420 1.04e-60 224
MS.gene030910.t1 MTR_5g029370 37.376 404 172 11 53 444 86 420 1.04e-60 224
MS.gene030910.t1 MTR_1g038400 36.693 387 172 9 52 430 24 345 6.47e-56 204
MS.gene030910.t1 MTR_3g075210 34.988 403 191 10 56 448 18 359 1.08e-52 202
MS.gene030910.t1 MTR_1g038370 38.538 301 145 8 142 430 33 305 1.15e-46 177
MS.gene030910.t1 MTR_1g094740 39.367 221 124 3 252 462 272 492 6.19e-41 165
MS.gene030910.t1 MTR_7g407000 44.928 138 51 4 298 427 33 153 3.08e-27 108
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030910.t1 AT1G08620 44.444 999 478 15 37 959 141 1138 0.0 780
MS.gene030910.t1 AT1G08620 44.444 999 478 15 37 959 127 1124 0.0 779
MS.gene030910.t1 AT1G08620 44.444 999 478 15 37 959 127 1124 0.0 779
MS.gene030910.t1 AT1G08620 44.444 999 478 15 37 959 127 1124 0.0 779
MS.gene030910.t1 AT4G20400 58.206 591 242 3 1 589 1 588 0.0 722
MS.gene030910.t1 AT4G20400 41.350 237 107 3 826 1058 743 951 3.28e-45 177
MS.gene030910.t1 AT1G30810 61.407 583 215 5 14 593 17 592 0.0 709
MS.gene030910.t1 AT1G30810 50.811 185 78 3 813 997 648 819 9.26e-49 187
MS.gene030910.t1 AT1G30810 61.407 583 215 5 14 593 17 592 0.0 709
MS.gene030910.t1 AT1G30810 50.811 185 78 3 813 997 648 819 9.26e-49 187
MS.gene030910.t1 AT1G30810 61.407 583 215 5 14 593 17 592 0.0 709
MS.gene030910.t1 AT1G30810 50.811 185 78 3 813 997 648 819 9.26e-49 187
MS.gene030910.t1 AT2G34880 59.170 578 209 10 20 589 25 583 0.0 689
MS.gene030910.t1 AT2G34880 47.236 199 94 3 798 996 618 805 5.13e-44 172
MS.gene030910.t1 AT4G20400 60.227 528 205 3 64 589 7 531 0.0 670
MS.gene030910.t1 AT4G20400 41.350 237 107 3 826 1058 686 894 3.62e-45 177
MS.gene030910.t1 AT2G38950 42.045 528 278 4 52 579 104 603 2.92e-135 425
MS.gene030910.t1 AT1G63490 40.898 423 206 6 165 577 38 426 2.34e-90 315
MS.gene030910.t1 AT1G63490 40.898 423 206 6 165 577 291 679 1.97e-89 315
MS.gene030910.t1 AT1G63490 54.412 68 27 1 57 124 32 95 1.68e-13 75.9
MS.gene030910.t1 AT1G63490 40.898 423 206 6 165 577 291 679 2.06e-89 315
MS.gene030910.t1 AT1G63490 54.412 68 27 1 57 124 32 95 1.71e-13 75.9
MS.gene030910.t1 AT5G46910 34.592 503 239 16 55 546 102 525 2.16e-62 225
MS.gene030910.t1 AT5G46910 34.394 503 240 15 55 546 102 525 5.17e-62 227
MS.gene030910.t1 AT5G04240 31.746 441 237 11 56 445 16 443 1.96e-46 182
MS.gene030910.t1 AT3G48430 32.126 414 208 11 56 445 20 384 6.08e-42 168
MS.gene030910.t1 AT1G63490 38.655 238 123 4 345 577 1 220 7.77e-41 164

Find 232 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCATGATAAGTTGTTATT+TGG 0.119436 4.3:+11134997 MS.gene030910:CDS
TATCGCACTGTCCAGCATTC+TGG 0.177670 4.3:+11134820 MS.gene030910:CDS
GTCATTCCTGCTGGATTTCT+TGG 0.180288 4.3:+11136519 MS.gene030910:CDS
AAAATCTAAAATGTTTAAAT+TGG 0.189270 4.3:+11135073 MS.gene030910:CDS
TCTAGAAAGATTCCTGAAAA+AGG 0.206821 4.3:+11137245 MS.gene030910:CDS
ATCACTACCTTTACCATCTT+TGG 0.219822 4.3:-11133445 None:intergenic
TTGAATGAAACAGTTGAAAT+TGG 0.239187 4.3:+11131668 None:intergenic
CTGCAAATGCACTCAGATTT+AGG 0.254376 4.3:+11136153 MS.gene030910:CDS
CGATTTCTGTAGGTGTATTA+TGG 0.257794 4.3:+11133629 MS.gene030910:intron
ATGTTTGTTTCGTGCCTAAA+AGG 0.262071 4.3:-11132638 None:intergenic
ACACTTATTGTGACGGATTT+CGG 0.268838 4.3:-11135965 None:intergenic
TTCGGTTGAGCTTGTTAGTT+TGG 0.273455 4.3:+11136275 MS.gene030910:CDS
AGTTCTTTGTATTTGAATAT+TGG 0.274068 4.3:+11135901 MS.gene030910:CDS
CCTTTCGCCATCCATTATTC+AGG 0.275215 4.3:+11136870 MS.gene030910:CDS
TCTGAATCTGATGATAAGTT+TGG 0.276549 4.3:+11133336 MS.gene030910:CDS
CTCAAAGAATTTCAGCAATA+TGG 0.283663 4.3:+11133384 MS.gene030910:CDS
GGTACACCATACCATACTTT+TGG 0.284346 4.3:-11134399 None:intergenic
AATAACTTTGCGCGACTTCC+AGG 0.284607 4.3:+11133752 MS.gene030910:CDS
AAATTGTCCCTCCAGCTTGC+TGG 0.294266 4.3:+11133112 MS.gene030910:CDS
CATATCTCTTTCTCCTTAAG+AGG 0.303958 4.3:-11133147 None:intergenic
ATCGATGGTCATAAAATGTT+TGG 0.309057 4.3:+11136844 MS.gene030910:CDS
CATCAATCCACAACACAAAA+AGG 0.310969 4.3:+11132682 MS.gene030910:CDS
ACCAACTCGTTGAGTAGATT+TGG 0.312207 4.3:-11134489 None:intergenic
TGTGGATCTGACTGGTGATA+TGG 0.338493 4.3:+11135822 MS.gene030910:CDS
CCAACTAATGTTCGAAATTC+CGG 0.341000 4.3:+11136096 MS.gene030910:CDS
ACAGGTGTTTCACCGATTAT+AGG 0.342856 4.3:-11132912 None:intergenic
CAAGTTAATTCTGAATCTTC+AGG 0.346105 4.3:+11137072 MS.gene030910:CDS
CGAGAGACGTGAACCGTCTT+TGG 0.347777 4.3:+11133479 MS.gene030910:CDS
AATGGATAAAAGATTTGTTC+TGG 0.348982 4.3:+11135492 MS.gene030910:CDS
AGTTTGCATTACCTGAATAA+TGG 0.351329 4.3:-11136881 None:intergenic
CGAAATTCCGGTACACTTGA+TGG 0.353346 4.3:+11136108 MS.gene030910:CDS
CCGGAATTTCGAACATTAGT+TGG 0.354395 4.3:-11136096 None:intergenic
CAAAGATGGGAACGTGTAAT+AGG 0.357690 4.3:+11133277 MS.gene030910:CDS
GATAAGTTTGGATTCCAATC+AGG 0.359070 4.3:+11133348 MS.gene030910:CDS
GGCTCCACCTTGCCCTCTTA+AGG 0.362816 4.3:+11133134 MS.gene030910:CDS
CTAAGACAAGAATAGTTATC+AGG 0.379211 4.3:-11135442 None:intergenic
TATGGAGCTGACTTGGAAAC+TGG 0.379640 4.3:+11133647 MS.gene030910:CDS
GGTTGCTCTTCAAACAAATC+AGG 0.381453 4.3:-11134468 None:intergenic
CAATAAAGTTAAGGAGGATA+AGG 0.382232 4.3:+11135876 MS.gene030910:CDS
TGTCAAAGATATATTTGTAT+TGG 0.383264 4.3:-11136220 None:intergenic
TCAGTTAAGGATGATGTCTT+AGG 0.384378 4.3:-11133689 None:intergenic
CTTTCAGAGACAACTCTTCA+TGG 0.388357 4.3:+11135045 MS.gene030910:CDS
TCGGTTGAGCTTGTTAGTTT+GGG 0.393615 4.3:+11136276 MS.gene030910:CDS
TGCTGGTGGTATTTCTGTCT+TGG 0.397001 4.3:+11136053 MS.gene030910:CDS
TTCAGCATCTTTAAATGATC+CGG 0.400591 4.3:-11135328 None:intergenic
ATCGCACTGTCCAGCATTCT+GGG 0.402356 4.3:+11134821 MS.gene030910:CDS
GCAAATCAACTTGCTGAATA+CGG 0.404788 4.3:-11133191 None:intergenic
ACTGGGGTGACCCAAAAGTA+TGG 0.405240 4.3:+11134388 MS.gene030910:CDS
TCCTCAGACTTAAGTATTGA+AGG 0.408574 4.3:-11134787 None:intergenic
CTCTTAAGGAGAAAGAGATA+TGG 0.410495 4.3:+11133148 MS.gene030910:CDS
ATTCACTTAATTATCTGCAC+TGG 0.413564 4.3:+11134370 MS.gene030910:CDS
TGTTCTTACCAATGCAGTTA+AGG 0.414403 4.3:+11135119 MS.gene030910:CDS
ATCCAAATAACAACTTATCA+TGG 0.414820 4.3:-11134999 None:intergenic
ACATTGGTTGAAGCATTAGA+AGG 0.417317 4.3:+11135541 MS.gene030910:CDS
CTTGATGGTTGTAAATTGTT+TGG 0.418077 4.3:+11136123 MS.gene030910:CDS
ACTGGGATCTTGAGCTTCAA+TGG 0.419115 4.3:-11137019 None:intergenic
AAATATATTCCAGGTTACTT+TGG 0.419381 4.3:+11136681 MS.gene030910:intron
CAAAGATATATTTGTATTGG+AGG 0.424188 4.3:-11136217 None:intergenic
GTGTTTGTGAAAACCTCGTT+GGG 0.424363 4.3:-11136712 None:intergenic
GAAGCATGTCGGCCTATAAT+CGG 0.425042 4.3:+11132900 MS.gene030910:CDS
CTTCGATTCGGTTGAGGAAA+GGG 0.427057 4.3:+11135363 MS.gene030910:CDS
TCAGATTTGTATGCTATGTC+TGG 0.427067 4.3:+11133719 MS.gene030910:CDS
AGAGAGGCTTGAATGGCTTC+CGG 0.431090 4.3:+11135309 MS.gene030910:CDS
ACATAGTTACAGATGCTTGA+TGG 0.431354 4.3:-11136489 None:intergenic
ATCTGAATCACTCTCAGTTA+AGG 0.431446 4.3:-11133702 None:intergenic
AATTGTCCCTCCAGCTTGCT+GGG 0.433006 4.3:+11133113 MS.gene030910:CDS
ATATTTAGCAAAGAATTTGC+AGG 0.436457 4.3:-11135940 None:intergenic
GTTTGTGAAGTCATTCCTGC+TGG 0.436870 4.3:+11136510 MS.gene030910:CDS
TGCTTCGACTGGATCCCATC+TGG 0.438506 4.3:-11132883 None:intergenic
CTTAATAGTATGCTTGAAAC+GGG 0.448898 4.3:+11136183 MS.gene030910:CDS
GACTTGGAAACTGGAGCACT+TGG 0.449548 4.3:+11133656 MS.gene030910:CDS
AGTTTGGGATCTGTTGTGTA+TGG 0.451056 4.3:+11136291 MS.gene030910:CDS
TTGCATGCACGAACAAGATA+TGG 0.452082 4.3:+11135633 MS.gene030910:CDS
GGTCATGGACAATAAAGTTA+AGG 0.453833 4.3:+11135867 MS.gene030910:CDS
GGAACGTGTAATAGGAGAAC+TGG 0.458459 4.3:+11133285 MS.gene030910:CDS
AATAAAGTTAAGGAGGATAA+GGG 0.464006 4.3:+11135877 MS.gene030910:CDS
CAAGGTGGAGCCCAGCAAGC+TGG 0.465917 4.3:-11133123 None:intergenic
GACTTGCACCTCTCTGCTGT+TGG 0.469090 4.3:+11135406 MS.gene030910:CDS
AATCATTACCTTAACTGCAT+TGG 0.469539 4.3:-11135127 None:intergenic
GTCATGAATGTGTAGGGTAC+TGG 0.470928 4.3:+11137040 MS.gene030910:CDS
TGGTGTCGATTTGATAAAGC+TGG 0.472194 4.3:+11137170 MS.gene030910:CDS
AAAAGATCGCCTTCTTGTAC+AGG 0.472566 4.3:+11135694 MS.gene030910:CDS
AATTCTTTGAGTGTGAAGTC+TGG 0.473727 4.3:-11133372 None:intergenic
CGCATTGCTCGTAACTCGTC+AGG 0.474777 4.3:-11137273 None:intergenic
GAAACTGGAGCACTTGGAAG+TGG 0.475135 4.3:+11133662 MS.gene030910:CDS
AGGATATTGAAGGTGAATAC+TGG 0.475212 4.3:+11133502 MS.gene030910:CDS
AAAGTATGGTATGGTGTACC+TGG 0.475229 4.3:+11134402 MS.gene030910:CDS
CCATGCATAAACCAATCATA+TGG 0.479121 4.3:-11134925 None:intergenic
TCTTAAGGAGAAAGAGATAT+GGG 0.479506 4.3:+11133149 MS.gene030910:CDS
ACTTAATAGTATGCTTGAAA+CGG 0.483422 4.3:+11136182 MS.gene030910:CDS
TTTGAAGGAAGTGACATCTC+AGG 0.484096 4.3:+11133788 MS.gene030910:CDS
CAATGACTTCGATTCGGTTG+AGG 0.485568 4.3:+11135357 MS.gene030910:CDS
ACACCTCAGCAGATAAGTGC+TGG 0.487268 4.3:+11136731 MS.gene030910:CDS
TTCACTTAATTATCTGCACT+GGG 0.487394 4.3:+11134371 MS.gene030910:CDS
ACGTGGAAAGCAGTCAAAGA+TGG 0.489358 4.3:+11133263 MS.gene030910:CDS
TGAATGTGGCTCCATATGAT+TGG 0.492536 4.3:+11134914 MS.gene030910:CDS
AGCCGATGAGGAAGAAAAGT+AGG 0.498687 4.3:+11133226 MS.gene030910:CDS
CAGTCACATTTCTTCAGAGT+TGG 0.502183 4.3:+11135759 MS.gene030910:CDS
TTGACAGACAAGGATAATGA+TGG 0.505126 4.3:+11135282 MS.gene030910:intron
AATTTGTTATCACGTTTCCA+AGG 0.505646 4.3:+11134845 MS.gene030910:CDS
TAACAAATTCCCCAGAATGC+TGG 0.506467 4.3:-11134831 None:intergenic
TGAACTAGACATGCCTCCCT+TGG 0.507459 4.3:+11136807 MS.gene030910:CDS
CAAATCAACTTGCTGAATAC+GGG 0.511163 4.3:-11133190 None:intergenic
CCGTCTTTGGAGGATATTGA+AGG 0.513289 4.3:+11133492 MS.gene030910:CDS
TTAGTTCCATGGCTGTATGT+TGG 0.515006 4.3:+11133815 MS.gene030910:CDS
TTGAAGGAAGTGACATCTCA+GGG 0.515084 4.3:+11133789 MS.gene030910:CDS
AACTTCTCGTACACCTTATG+TGG 0.516226 4.3:+11135804 MS.gene030910:CDS
GAGACGTGAACCGTCTTTGG+AGG 0.516381 4.3:+11133482 MS.gene030910:CDS
GTTGTTATTTGGATCTGCTA+AGG 0.517525 4.3:+11135008 MS.gene030910:CDS
ATAAATAAGCGCAAGAGTCT+CGG 0.517683 4.3:+11136784 MS.gene030910:CDS
GATGGACAATGACTTCGATT+CGG 0.519329 4.3:+11135351 MS.gene030910:CDS
AAGCCACAGTGGTATGCCCT+TGG 0.519658 4.3:-11134862 None:intergenic
TCATTTAAAGATGCTGAAGA+TGG 0.519800 4.3:+11135333 MS.gene030910:CDS
AAACTGAGAATTACAAAGAA+GGG 0.521718 4.3:+11135671 MS.gene030910:CDS
ATTTGTATGCTATGTCTGGC+TGG 0.521950 4.3:+11133723 MS.gene030910:CDS
AAGCATGCAATATATCCAAA+AGG 0.529982 4.3:+11136330 MS.gene030910:CDS
CTAAGGGACGTATCTTAGCT+AGG 0.531048 4.3:-11133068 None:intergenic
ACTTCGATTCGGTTGAGGAA+AGG 0.531289 4.3:+11135362 MS.gene030910:CDS
CGTGGAAAGCAGTCAAAGAT+GGG 0.533229 4.3:+11133264 MS.gene030910:CDS
ATAGGCCGACATGCTTCGAC+TGG 0.534634 4.3:-11132894 None:intergenic
ATAGCTGAAGCATGGCTCCC+AGG 0.534934 4.3:-11134420 None:intergenic
GTGTGAAGTCTGGCCCTGAT+TGG 0.535187 4.3:-11133362 None:intergenic
TCTATCAGCACTTTCAGCGC+AGG 0.535328 4.3:-11137336 None:intergenic
TAAATTGGAGAAATGCTTGT+GGG 0.535780 4.3:+11135088 MS.gene030910:CDS
GGTTCAAGTAATAGCTCTCT+AGG 0.535894 4.3:+11137126 MS.gene030910:CDS
TTAAGAGGTACCTCAAATGT+TGG 0.536321 4.3:-11132942 None:intergenic
GATGACTCTAAGTTAACTTG+TGG 0.541352 4.3:+11137105 MS.gene030910:CDS
TACCACTGTGGCTTCAGCAG+TGG 0.544420 4.3:+11134871 MS.gene030910:CDS
GGTGTATTATGGAGCTGACT+TGG 0.544686 4.3:+11133640 MS.gene030910:intron
TCAAAACATAATGCAGAACC+TGG 0.546610 4.3:-11133770 None:intergenic
TTTCATGATGAGACTCTGAA+TGG 0.546643 4.3:-11135783 None:intergenic
AGTTAACTTAGAGTCATCAA+TGG 0.547322 4.3:-11137100 None:intergenic
GCAGATAATTAAGTGAATAG+AGG 0.549173 4.3:-11134365 None:intergenic
TCTTTCTCCTTAAGAGGGCA+AGG 0.549473 4.3:-11133141 None:intergenic
AAAACTGAGAATTACAAAGA+AGG 0.549929 4.3:+11135670 MS.gene030910:CDS
GTACCCTACACATTCATGAC+TGG 0.551735 4.3:-11137037 None:intergenic
TCCAAATAACAACTTATCAT+GGG 0.552438 4.3:-11134998 None:intergenic
ATAAGTTTGGATTCCAATCA+GGG 0.554076 4.3:+11133349 MS.gene030910:CDS
ATGTGACTGTGAGGACTGCT+AGG 0.556875 4.3:-11135745 None:intergenic
TCACCAGTCAGATCCACATA+AGG 0.560398 4.3:-11135817 None:intergenic
GACAACATAGAACTTAATGC+TGG 0.560941 4.3:+11136036 MS.gene030910:CDS
CCATATGATTGGTTTATGCA+TGG 0.561009 4.3:+11134925 MS.gene030910:CDS
ATCCCAGTCATGAATGTGTA+GGG 0.562524 4.3:+11137034 MS.gene030910:CDS
ACATTAGTTGGACATGGTGA+AGG 0.562740 4.3:-11136084 None:intergenic
TGCCGCAGATATCATCCAGA+TGG 0.562975 4.3:+11132868 MS.gene030910:intron
TAGGAGTTTGAAGACACGCT+TGG 0.563769 4.3:+11133042 MS.gene030910:intron
ATGGAACACACTTATTGTGA+CGG 0.563827 4.3:-11135972 None:intergenic
AGTGATGCCAAAGATGGTAA+AGG 0.565685 4.3:+11133438 MS.gene030910:CDS
CATGAAGAGTTGTCTCTGAA+AGG 0.565752 4.3:-11135044 None:intergenic
TGCATTACCTGAATAATGGA+TGG 0.567093 4.3:-11136877 None:intergenic
ATGCCATACGGTTCAGCTAA+GGG 0.571367 4.3:-11133084 None:intergenic
GTGTGGGAAACTAGAAACAT+TGG 0.571650 4.3:+11135583 MS.gene030910:CDS
ATATCTCTTTCTCCTTAAGA+GGG 0.572645 4.3:-11133146 None:intergenic
AGTTGTTTCTGCTAGTGTTG+AGG 0.574329 4.3:+11135606 MS.gene030910:CDS
AGAAATGCTTGTGGGAAAGA+TGG 0.574345 4.3:+11135096 MS.gene030910:CDS
TGCTGGACAGTGCGATACAC+AGG 0.576053 4.3:-11134814 None:intergenic
ACTACATACCCAGCAAAATG+AGG 0.576860 4.3:-11133849 None:intergenic
TACCCTACACATTCATGACT+GGG 0.577744 4.3:-11137036 None:intergenic
GGGTTGAGTGATGCCAAAGA+TGG 0.578033 4.3:+11133432 MS.gene030910:CDS
TTTACAACCATCAAGTGTAC+CGG 0.580118 4.3:-11136115 None:intergenic
TCTGCTAAGGAAGCTGTACA+TGG 0.580656 4.3:+11135021 MS.gene030910:CDS
GGTGTTTGTGAAAACCTCGT+TGG 0.582249 4.3:-11136713 None:intergenic
CGATTTGATAAAGCTGGAGG+AGG 0.582351 4.3:+11137176 MS.gene030910:CDS
CCTGAATAATGGATGGCGAA+AGG 0.582584 4.3:-11136870 None:intergenic
ACCAAATCTACTCAACGAGT+TGG 0.584203 4.3:+11134488 MS.gene030910:CDS
CAATAAGTGTGTTCCATATG+CGG 0.587501 4.3:+11135978 MS.gene030910:CDS
ATTTGTTATCACGTTTCCAA+GGG 0.587884 4.3:+11134846 MS.gene030910:CDS
CATGGGACAAGGATGTCTTA+CGG 0.588015 4.3:-11134981 None:intergenic
TTTCGAACATTAGTTGGACA+TGG 0.589138 4.3:-11136090 None:intergenic
GATGTTGTGCAGTAGCTCCA+AGG 0.590339 4.3:-11136824 None:intergenic
GGTGGAGCCCAGCAAGCTGG+AGG 0.590956 4.3:-11133120 None:intergenic
TCATTAGTTCCTGTACAAGA+AGG 0.593267 4.3:-11135703 None:intergenic
TTCAATACTTAAGTCTGAGG+AGG 0.593936 4.3:+11134789 MS.gene030910:CDS
ACACCTTATGTGGATCTGAC+TGG 0.594288 4.3:+11135814 MS.gene030910:CDS
CATGGACAATAAAGTTAAGG+AGG 0.596567 4.3:+11135870 MS.gene030910:CDS
ACCACGTGCAATAGAAGTGT+GGG 0.596681 4.3:+11135567 MS.gene030910:CDS
CAACTTGAATGATACTATGT+TGG 0.596879 4.3:+11135846 MS.gene030910:CDS
AATAGATGAGCTAAGTACAT+TGG 0.598739 4.3:+11135525 MS.gene030910:CDS
CACCTCAGCAGATAAGTGCT+GGG 0.599510 4.3:+11136732 MS.gene030910:CDS
GATCCCAGTCATGAATGTGT+AGG 0.603075 4.3:+11137033 MS.gene030910:CDS
GCCGATGAGGAAGAAAAGTA+GGG 0.604404 4.3:+11133227 MS.gene030910:CDS
GAATGATACTATGTTGGTCA+TGG 0.604927 4.3:+11135852 MS.gene030910:CDS
TTCCCAGCACTTATCTGCTG+AGG 0.605988 4.3:-11136734 None:intergenic
CGTCCCTTAGCTGAACCGTA+TGG 0.608504 4.3:+11133081 MS.gene030910:CDS
CACATTCCAACATACAGCCA+TGG 0.611126 4.3:-11133821 None:intergenic
TCCTTCAATACTTAAGTCTG+AGG 0.614807 4.3:+11134786 MS.gene030910:CDS
CCTTCAATATCCTCCAAAGA+CGG 0.614825 4.3:-11133492 None:intergenic
GCCGCAGATATCATCCAGAT+GGG 0.615605 4.3:+11132869 MS.gene030910:intron
AAAGGGCCAAGAAATCCAGC+AGG 0.615665 4.3:-11136525 None:intergenic
ATGTTGTGCAGTAGCTCCAA+GGG 0.615885 4.3:-11136823 None:intergenic
AAGACGGTTCACGTCTCTCG+TGG 0.616908 4.3:-11133476 None:intergenic
GAAACCGACTGATGAGGTCG+AGG 0.617162 4.3:+11133536 MS.gene030910:CDS
GAGCTACTGCACAACATCGA+TGG 0.619592 4.3:+11136829 MS.gene030910:CDS
TATGCCATACGGTTCAGCTA+AGG 0.620993 4.3:-11133085 None:intergenic
TTCAGAACCGAGAGCCGATG+AGG 0.624951 4.3:+11133214 MS.gene030910:CDS
GTGGAGCCCAGCAAGCTGGA+GGG 0.625471 4.3:-11133119 None:intergenic
AATAGAGAAACCGACTGATG+AGG 0.625485 4.3:+11133530 MS.gene030910:CDS
AACCACGTGCAATAGAAGTG+TGG 0.626804 4.3:+11135566 MS.gene030910:CDS
TTGTGCAGAGGCTGTGAATG+TGG 0.627642 4.3:+11134900 MS.gene030910:CDS
CTTGTACAGGAACTAATGAG+AGG 0.627759 4.3:+11135707 MS.gene030910:CDS
TCCCACACTTCTATTGCACG+TGG 0.633189 4.3:-11135568 None:intergenic
AACATAGAACTTAATGCTGG+TGG 0.633786 4.3:+11136039 MS.gene030910:CDS
TTCTCCTTAAGAGGGCAAGG+TGG 0.634638 4.3:-11133138 None:intergenic
ATTACCTCGACCTCATCAGT+CGG 0.637187 4.3:-11133540 None:intergenic
TGAGGAAGAAAAGTAGGGCA+AGG 0.637571 4.3:+11133232 MS.gene030910:CDS
CATCTTCTATAGCTGAAGCA+TGG 0.639567 4.3:-11134428 None:intergenic
CAGTGGCTTCAATTGTGCAG+AGG 0.641990 4.3:+11134888 MS.gene030910:CDS
TTAAATTGGAGAAATGCTTG+TGG 0.644063 4.3:+11135087 MS.gene030910:CDS
TCAAATGTTGGATAAAACAC+AGG 0.645267 4.3:-11132930 None:intergenic
GGGATCCAGTCGAAGCATGT+CGG 0.647902 4.3:+11132889 MS.gene030910:CDS
AAGCTGGAGGAGGATGACAT+AGG 0.648499 4.3:+11137186 MS.gene030910:CDS
TCAACTTGCTGAATACGGGT+CGG 0.649157 4.3:-11133186 None:intergenic
TGCATATTATCACGCCAAAG+AGG 0.650997 4.3:+11131692 MS.gene030910:CDS
AAGTATGGTATGGTGTACCT+GGG 0.658392 4.3:+11134403 MS.gene030910:CDS
CAGCTATAGAAGATGCAATG+AGG 0.660862 4.3:+11134436 MS.gene030910:CDS
TAACAACTTATCATGGGACA+AGG 0.661705 4.3:-11134992 None:intergenic
TCGCACTGTCCAGCATTCTG+GGG 0.664789 4.3:+11134822 MS.gene030910:CDS
GGTGACCCAAAAGTATGGTA+TGG 0.666509 4.3:+11134393 MS.gene030910:CDS
TGTCGATTTGATAAAGCTGG+AGG 0.667838 4.3:+11137173 MS.gene030910:CDS
CTGATGCACAATTGACTCAG+TGG 0.670313 4.3:+11137310 MS.gene030910:CDS
ATAGCTCTCTAGGTGACTCG+AGG 0.683160 4.3:+11137136 MS.gene030910:CDS
TTGTGCAGTAGCTCCAAGGG+AGG 0.695431 4.3:-11136820 None:intergenic
AGGGCAAGGAAACGAAAACG+TGG 0.698161 4.3:+11133246 MS.gene030910:CDS
CTGTTGTGTATGGAAAACAT+TGG 0.709730 4.3:+11136301 MS.gene030910:CDS
TGAAGGAAGTGACATCTCAG+GGG 0.710950 4.3:+11133790 MS.gene030910:CDS
AGCCACTGCTGAAGCCACAG+TGG 0.722140 4.3:-11134873 None:intergenic
TCTGAAGAAATGTGACTGTG+AGG 0.731640 4.3:-11135754 None:intergenic
TTTCCAAGGGCATACCACTG+TGG 0.743487 4.3:+11134859 MS.gene030910:CDS
ACTCGCAACCAACAGCAGAG+AGG 0.744115 4.3:-11135414 None:intergenic
TGTTTGTGAAAACCTCGTTG+GGG 0.744486 4.3:-11136711 None:intergenic
TTTGGAAGAACACCCCAACG+AGG 0.753244 4.3:+11136699 MS.gene030910:CDS
TCACTTAATTATCTGCACTG+GGG 0.758613 4.3:+11134372 MS.gene030910:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAATTATAAACCATTAT+AGG - chr4.3:11132014-11132033 None:intergenic 10.0%
!! AATAATTATAATCTAATTGA+AGG + chr4.3:11134053-11134072 MS.gene030910:intron 10.0%
!! ATATCTAAACATATATTTAT+AGG - chr4.3:11132793-11132812 None:intergenic 10.0%
!!! AAAATCTAAAATGTTTAAAT+TGG + chr4.3:11135073-11135092 MS.gene030910:CDS 10.0%
!!! ATTTTTCTAAATATATGAAA+GGG - chr4.3:11135183-11135202 None:intergenic 10.0%
!! AATGAAAAAGTTTAGTATTT+CGG + chr4.3:11136257-11136276 MS.gene030910:CDS 15.0%
!! ATCAGAAGATATATAAAATA+AGG - chr4.3:11134722-11134741 None:intergenic 15.0%
!! CACAAAAATATAAACAAAAA+AGG - chr4.3:11135247-11135266 None:intergenic 15.0%
!! TTCAATAAAAAATATATTCC+AGG + chr4.3:11136672-11136691 MS.gene030910:intron 15.0%
!!! AAATACTAAACTTTTTCATT+GGG - chr4.3:11136257-11136276 None:intergenic 15.0%
!!! GATTTTTCTAAATATATGAA+AGG - chr4.3:11135184-11135203 None:intergenic 15.0%
!!! TATAATTTTTTTCTTTCTTG+AGG + chr4.3:11132023-11132042 MS.gene030910:intron 15.0%
!!! TTAATTTTATTCTTCTCATT+AGG + chr4.3:11133023-11133042 MS.gene030910:intron 15.0%
!!! TTTAACTTTTCTTTTTCTTT+TGG + chr4.3:11136415-11136434 MS.gene030910:intron 15.0%
!!! TTTTTCTAAATATATGAAAG+GGG - chr4.3:11135182-11135201 None:intergenic 15.0%
!! AAAAAAACATATAACTCTAC+AGG - chr4.3:11133979-11133998 None:intergenic 20.0%
!! ACTTATAATATATACGTCTA+TGG - chr4.3:11136961-11136980 None:intergenic 20.0%
!! AGTTCTTTGTATTTGAATAT+TGG + chr4.3:11135901-11135920 MS.gene030910:CDS 20.0%
!! ATAATCTAATTGAAGGTTAA+TGG + chr4.3:11134060-11134079 MS.gene030910:intron 20.0%
!! TATGAATGAAGAAAAGTTTA+AGG + chr4.3:11133901-11133920 MS.gene030910:intron 20.0%
!! TGTCAAAGATATATTTGTAT+TGG - chr4.3:11136223-11136242 None:intergenic 20.0%
!! TTCTAGTGTATATACAAAAT+GGG - chr4.3:11132380-11132399 None:intergenic 20.0%
!!! AATACTAAACTTTTTCATTG+GGG - chr4.3:11136256-11136275 None:intergenic 20.0%
!!! ATGCATAATGTATATTTTGT+AGG + chr4.3:11134610-11134629 MS.gene030910:intron 20.0%
!!! CTGAATTTATGATTTTTTCT+AGG + chr4.3:11131988-11132007 MS.gene030910:intron 20.0%
!!! GAAATACTAAACTTTTTCAT+TGG - chr4.3:11136258-11136277 None:intergenic 20.0%
!!! TTTCTAGTGTATATACAAAA+TGG - chr4.3:11132381-11132400 None:intergenic 20.0%
!!! TTTTGAAATTGAATGTAACA+TGG + chr4.3:11132827-11132846 MS.gene030910:intron 20.0%
! AAAACTGAGAATTACAAAGA+AGG + chr4.3:11135670-11135689 MS.gene030910:CDS 25.0%
! AAACTGAGAATTACAAAGAA+GGG + chr4.3:11135671-11135690 MS.gene030910:CDS 25.0%
! AAATATATTCCAGGTTACTT+TGG + chr4.3:11136681-11136700 MS.gene030910:intron 25.0%
! AAATGTAAATGGTTAGAAGT+GGG - chr4.3:11132448-11132467 None:intergenic 25.0%
! AATAAAGTTAAGGAGGATAA+GGG + chr4.3:11135877-11135896 MS.gene030910:CDS 25.0%
! AATATTGTTGACAACATTGT+TGG + chr4.3:11133560-11133579 MS.gene030910:intron 25.0%
! ACTGAAACAGTTTATCATAA+TGG - chr4.3:11136999-11137018 None:intergenic 25.0%
! ACTTAATAGTATGCTTGAAA+CGG + chr4.3:11136182-11136201 MS.gene030910:CDS 25.0%
! ATATTTAGCAAAGAATTTGC+AGG - chr4.3:11135943-11135962 None:intergenic 25.0%
! ATCCAAATAACAACTTATCA+TGG - chr4.3:11135002-11135021 None:intergenic 25.0%
! CAAAGATATATTTGTATTGG+AGG - chr4.3:11136220-11136239 None:intergenic 25.0%
! GATTCATAAGACATTGTTTA+AGG - chr4.3:11131752-11131771 None:intergenic 25.0%
! GTAAGCACTCATAATATTTA+AGG + chr4.3:11134176-11134195 MS.gene030910:intron 25.0%
! TAGAAAAATCCGTAAAACTT+TGG + chr4.3:11135194-11135213 MS.gene030910:intron 25.0%
! TATATATCTTCTGATTGTAG+TGG + chr4.3:11134727-11134746 MS.gene030910:intron 25.0%
! TATTACTATACGATTTCTGT+AGG + chr4.3:11133619-11133638 MS.gene030910:intron 25.0%
! TATTCCAAAAACCAAAACAA+AGG - chr4.3:11132097-11132116 None:intergenic 25.0%
! TCCAAATAACAACTTATCAT+GGG - chr4.3:11135001-11135020 None:intergenic 25.0%
! TCTAGTGTATATACAAAATG+GGG - chr4.3:11132379-11132398 None:intergenic 25.0%
!! AAATACCATCCAAAGTTTTA+CGG - chr4.3:11135206-11135225 None:intergenic 25.0%
!! AAGCTAAGTTGACAAATTTA+AGG + chr4.3:11134008-11134027 MS.gene030910:intron 25.0%
!! AATGGATAAAAGATTTGTTC+TGG + chr4.3:11135492-11135511 MS.gene030910:CDS 25.0%
!! ACAATTTTACATATGCCATA+CGG - chr4.3:11133099-11133118 None:intergenic 25.0%
!! ACATGATAGTGATAATTAAG+AGG - chr4.3:11132960-11132979 None:intergenic 25.0%
!! ATAAAAGAACAATCTAAGAC+CGG - chr4.3:11136378-11136397 None:intergenic 25.0%
!! CTATCATGTACTATAGATTT+TGG + chr4.3:11132971-11132990 MS.gene030910:intron 25.0%
!! TGAATGATGTGTCATATTTT+TGG + chr4.3:11131952-11131971 MS.gene030910:intron 25.0%
!! TTCTTTTGGTGAAATTATGA+AGG + chr4.3:11136429-11136448 MS.gene030910:intron 25.0%
!!! CCTTTTTTCTCTAACATAAA+GGG + chr4.3:11132299-11132318 MS.gene030910:intron 25.0%
!!! TCCTTTTTTCTCTAACATAA+AGG + chr4.3:11132298-11132317 MS.gene030910:intron 25.0%
!!! TCTTTTAAAGATTGCTACTT+CGG + chr4.3:11133411-11133430 MS.gene030910:CDS 25.0%
!!! TGTCTATTTTTTCTTTCAGT+TGG + chr4.3:11132576-11132595 MS.gene030910:intron 25.0%
AAAATCCGTAAAACTTTGGA+TGG + chr4.3:11135198-11135217 MS.gene030910:intron 30.0%
AAGCATGCAATATATCCAAA+AGG + chr4.3:11136330-11136349 MS.gene030910:CDS 30.0%
AATAGATGAGCTAAGTACAT+TGG + chr4.3:11135525-11135544 MS.gene030910:CDS 30.0%
AATCATTACCTTAACTGCAT+TGG - chr4.3:11135130-11135149 None:intergenic 30.0%
AATGAGATGATCAAAGAATC+AGG - chr4.3:11132143-11132162 None:intergenic 30.0%
ACAAAAAAAACCAACCTCTT+TGG - chr4.3:11131709-11131728 None:intergenic 30.0%
AGTTAACTTAGAGTCATCAA+TGG - chr4.3:11137103-11137122 None:intergenic 30.0%
AGTTTGCATTACCTGAATAA+TGG - chr4.3:11136884-11136903 None:intergenic 30.0%
ATAAGTTTGGATTCCAATCA+GGG + chr4.3:11133349-11133368 MS.gene030910:CDS 30.0%
ATATCTCTTTCTCCTTAAGA+GGG - chr4.3:11133149-11133168 None:intergenic 30.0%
ATCGATGGTCATAAAATGTT+TGG + chr4.3:11136844-11136863 MS.gene030910:CDS 30.0%
ATTCACTTAATTATCTGCAC+TGG + chr4.3:11134370-11134389 MS.gene030910:CDS 30.0%
CAACTTGAATGATACTATGT+TGG + chr4.3:11135846-11135865 MS.gene030910:CDS 30.0%
CAAGTTAATTCTGAATCTTC+AGG + chr4.3:11137072-11137091 MS.gene030910:CDS 30.0%
CAATAAAGTTAAGGAGGATA+AGG + chr4.3:11135876-11135895 MS.gene030910:CDS 30.0%
CCAAGAGATTGAAATGTAAA+TGG - chr4.3:11132459-11132478 None:intergenic 30.0%
CCATTTACATTTCAATCTCT+TGG + chr4.3:11132456-11132475 MS.gene030910:intron 30.0%
CCCTTTATGTTAGAGAAAAA+AGG - chr4.3:11132302-11132321 None:intergenic 30.0%
CTAAGACAAGAATAGTTATC+AGG - chr4.3:11135445-11135464 None:intergenic 30.0%
CTAGAAAGATTCCTGAAAAA+GGG + chr4.3:11137246-11137265 MS.gene030910:CDS 30.0%
CTCAAAGAATTTCAGCAATA+TGG + chr4.3:11133384-11133403 MS.gene030910:CDS 30.0%
CTTAATAGTATGCTTGAAAC+GGG + chr4.3:11136183-11136202 MS.gene030910:CDS 30.0%
GAAATGTAAATGGTTAGAAG+TGG - chr4.3:11132449-11132468 None:intergenic 30.0%
GCAGATAATTAAGTGAATAG+AGG - chr4.3:11134368-11134387 None:intergenic 30.0%
TAAATTGGAGAAATGCTTGT+GGG + chr4.3:11135088-11135107 MS.gene030910:CDS 30.0%
TCAAATGTTGGATAAAACAC+AGG - chr4.3:11132933-11132952 None:intergenic 30.0%
TCAGATCTTATCAATGTTGA+TGG + chr4.3:11131829-11131848 MS.gene030910:intron 30.0%
TCATTTAAAGATGCTGAAGA+TGG + chr4.3:11135333-11135352 MS.gene030910:CDS 30.0%
TCTAGAAAGATTCCTGAAAA+AGG + chr4.3:11137245-11137264 MS.gene030910:CDS 30.0%
TCTGAATCTGATGATAAGTT+TGG + chr4.3:11133336-11133355 MS.gene030910:CDS 30.0%
TCTTAAGGAGAAAGAGATAT+GGG + chr4.3:11133149-11133168 MS.gene030910:CDS 30.0%
TGTTAGGTGTAAGCTAAAAA+AGG - chr4.3:11136932-11136951 None:intergenic 30.0%
TTAAATTGGAGAAATGCTTG+TGG + chr4.3:11135087-11135106 MS.gene030910:CDS 30.0%
TTAACCCTCTTATTACTCAT+TGG + chr4.3:11132216-11132235 MS.gene030910:intron 30.0%
TTAGTTAGTTAGAGAGAGTT+GGG - chr4.3:11132267-11132286 None:intergenic 30.0%
TTCACTTAATTATCTGCACT+GGG + chr4.3:11134371-11134390 MS.gene030910:CDS 30.0%
TTCAGCATCTTTAAATGATC+CGG - chr4.3:11135331-11135350 None:intergenic 30.0%
TTGAGCTTAAAACAGAAACA+AGG - chr4.3:11136571-11136590 None:intergenic 30.0%
TTGTTCACGAATTATGTACA+TGG - chr4.3:11134577-11134596 None:intergenic 30.0%
! AAATCATTTGATGATCGCAT+TGG - chr4.3:11134132-11134151 None:intergenic 30.0%
! ACTTTGATTGTGTTTTCTCT+TGG + chr4.3:11131917-11131936 MS.gene030910:intron 30.0%
! AGATCTAAAATTTCTGACCT+AGG + chr4.3:11132053-11132072 MS.gene030910:intron 30.0%
! ATTTGTCAACTTAGCTTTCA+TGG - chr4.3:11134005-11134024 None:intergenic 30.0%
! CAAATAACACTCTAGAAACA+TGG - chr4.3:11131774-11131793 None:intergenic 30.0%
! CGGTGTTAATTACTCTTTAT+AGG - chr4.3:11134300-11134319 None:intergenic 30.0%
! CTTGATGGTTGTAAATTGTT+TGG + chr4.3:11136123-11136142 MS.gene030910:CDS 30.0%
! GTAAATACCTTTTTGTGTTG+TGG - chr4.3:11132692-11132711 None:intergenic 30.0%
! TCATGTACTATAGATTTTGG+CGG + chr4.3:11132974-11132993 MS.gene030910:intron 30.0%
! TCCCATGATAAGTTGTTATT+TGG + chr4.3:11134997-11135016 MS.gene030910:CDS 30.0%
! TGTGTTTTATCCAACATTTG+AGG + chr4.3:11132932-11132951 MS.gene030910:CDS 30.0%
! TTTTGCAGGATAATCCTTTT+AGG + chr4.3:11132624-11132643 MS.gene030910:intron 30.0%
!! AATTTGTTATCACGTTTCCA+AGG + chr4.3:11134845-11134864 MS.gene030910:CDS 30.0%
!! ATTTGTTATCACGTTTCCAA+GGG + chr4.3:11134846-11134865 MS.gene030910:CDS 30.0%
!! CTTTTAAAGATTGCTACTTC+GGG + chr4.3:11133412-11133431 MS.gene030910:CDS 30.0%
!! GATTAGTATTGCCTTTGTTT+TGG + chr4.3:11132083-11132102 MS.gene030910:intron 30.0%
!!! AGGTTGGTTTTTTTTGTACT+TGG + chr4.3:11131712-11131731 MS.gene030910:intron 30.0%
!!! ATTGCCTTTGTTTTGGTTTT+TGG + chr4.3:11132090-11132109 MS.gene030910:intron 30.0%
!!! GATTTTTTCTAGGCCTATAA+TGG + chr4.3:11131998-11132017 MS.gene030910:intron 30.0%
!!! TGGTTTTTTTTGTACTTGGT+TGG + chr4.3:11131716-11131735 MS.gene030910:intron 30.0%
!!! TTTTTGGAATAGCCTATGTT+TGG + chr4.3:11132106-11132125 MS.gene030910:intron 30.0%
AACATAGAACTTAATGCTGG+TGG + chr4.3:11136039-11136058 MS.gene030910:CDS 35.0%
AATTCTTTGAGTGTGAAGTC+TGG - chr4.3:11133375-11133394 None:intergenic 35.0%
ACACTAGAAACTCCAAAAGT+TGG + chr4.3:11132391-11132410 MS.gene030910:intron 35.0%
ACATAGTTACAGATGCTTGA+TGG - chr4.3:11136492-11136511 None:intergenic 35.0%
ACCAAAAAATAGCAGCAATG+AGG - chr4.3:11134531-11134550 None:intergenic 35.0%
ACCAAAATCACGATGACATT+TGG + chr4.3:11134662-11134681 MS.gene030910:intron 35.0%
ACGTCTATGGTACTAATGTT+AGG - chr4.3:11136948-11136967 None:intergenic 35.0%
ACTACAGCTCAAACAACAAA+AGG - chr4.3:11132515-11132534 None:intergenic 35.0%
AGAATTAGGGTTGTTTATCG+CGG - chr4.3:11132189-11132208 None:intergenic 35.0%
AGGAATGATACCCTGAAAAA+AGG - chr4.3:11136546-11136565 None:intergenic 35.0%
AGGATATTGAAGGTGAATAC+TGG + chr4.3:11133502-11133521 MS.gene030910:CDS 35.0%
AGTAATAAGAGGGTTAAGAG+GGG - chr4.3:11132213-11132232 None:intergenic 35.0%
ATAAATAAGCGCAAGAGTCT+CGG + chr4.3:11136784-11136803 MS.gene030910:CDS 35.0%
ATCACTACCTTTACCATCTT+TGG - chr4.3:11133448-11133467 None:intergenic 35.0%
ATCCTTGTCTGTCAAAAGTA+AGG - chr4.3:11135277-11135296 None:intergenic 35.0%
ATCTGAATCACTCTCAGTTA+AGG - chr4.3:11133705-11133724 None:intergenic 35.0%
ATGGAACACACTTATTGTGA+CGG - chr4.3:11135975-11135994 None:intergenic 35.0%
ATGTTTGTTTCGTGCCTAAA+AGG - chr4.3:11132641-11132660 None:intergenic 35.0%
CAAATCGACACCAAAAAGTT+TGG - chr4.3:11137163-11137182 None:intergenic 35.0%
CAATAAGTGTGTTCCATATG+CGG + chr4.3:11135978-11135997 MS.gene030910:CDS 35.0%
CATATCTCTTTCTCCTTAAG+AGG - chr4.3:11133150-11133169 None:intergenic 35.0%
CATCAATCCACAACACAAAA+AGG + chr4.3:11132682-11132701 MS.gene030910:CDS 35.0%
CATGGACAATAAAGTTAAGG+AGG + chr4.3:11135870-11135889 MS.gene030910:CDS 35.0%
CCAACTAATGTTCGAAATTC+CGG + chr4.3:11136096-11136115 MS.gene030910:CDS 35.0%
CCATGCATAAACCAATCATA+TGG - chr4.3:11134928-11134947 None:intergenic 35.0%
CGATTTCTGTAGGTGTATTA+TGG + chr4.3:11133629-11133648 MS.gene030910:intron 35.0%
CTCTTAAGGAGAAAGAGATA+TGG + chr4.3:11133148-11133167 MS.gene030910:CDS 35.0%
CTGTTGTGTATGGAAAACAT+TGG + chr4.3:11136301-11136320 MS.gene030910:CDS 35.0%
CTTAAAACAGAAACAAGGTC+AGG - chr4.3:11136566-11136585 None:intergenic 35.0%
GAATGATACTATGTTGGTCA+TGG + chr4.3:11135852-11135871 MS.gene030910:CDS 35.0%
GACAACATAGAACTTAATGC+TGG + chr4.3:11136036-11136055 MS.gene030910:CDS 35.0%
GAGTAATAAGAGGGTTAAGA+GGG - chr4.3:11132214-11132233 None:intergenic 35.0%
GATAAGTTTGGATTCCAATC+AGG + chr4.3:11133348-11133367 MS.gene030910:CDS 35.0%
GGAATGATACCCTGAAAAAA+GGG - chr4.3:11136545-11136564 None:intergenic 35.0%
GGGATACAATCATGAACTTA+GGG - chr4.3:11132359-11132378 None:intergenic 35.0%
GGTCATGGACAATAAAGTTA+AGG + chr4.3:11135867-11135886 MS.gene030910:CDS 35.0%
GTTAGTTAGTTAGAGAGAGT+TGG - chr4.3:11132268-11132287 None:intergenic 35.0%
GTTGCCAATGAGTAATAAGA+GGG - chr4.3:11132223-11132242 None:intergenic 35.0%
TAACAACTTATCATGGGACA+AGG - chr4.3:11134995-11135014 None:intergenic 35.0%
TCAAAACATAATGCAGAACC+TGG - chr4.3:11133773-11133792 None:intergenic 35.0%
TCACTTAATTATCTGCACTG+GGG + chr4.3:11134372-11134391 MS.gene030910:CDS 35.0%
TCAGATTTGTATGCTATGTC+TGG + chr4.3:11133719-11133738 MS.gene030910:CDS 35.0%
TCAGTTAAGGATGATGTCTT+AGG - chr4.3:11133692-11133711 None:intergenic 35.0%
TCATTAGTTCCTGTACAAGA+AGG - chr4.3:11135706-11135725 None:intergenic 35.0%
TCCTTCAATACTTAAGTCTG+AGG + chr4.3:11134786-11134805 MS.gene030910:CDS 35.0%
TGAGTAATAAGAGGGTTAAG+AGG - chr4.3:11132215-11132234 None:intergenic 35.0%
TGTTCTTACCAATGCAGTTA+AGG + chr4.3:11135119-11135138 MS.gene030910:CDS 35.0%
TGTTGCCAATGAGTAATAAG+AGG - chr4.3:11132224-11132243 None:intergenic 35.0%
TTCAATACTTAAGTCTGAGG+AGG + chr4.3:11134789-11134808 MS.gene030910:CDS 35.0%
TTGACAGACAAGGATAATGA+TGG + chr4.3:11135282-11135301 MS.gene030910:intron 35.0%
TTTACAACCATCAAGTGTAC+CGG - chr4.3:11136118-11136137 None:intergenic 35.0%
TTTCATGATGAGACTCTGAA+TGG - chr4.3:11135786-11135805 None:intergenic 35.0%
TTTCGAACATTAGTTGGACA+TGG - chr4.3:11136093-11136112 None:intergenic 35.0%
! AACAACAAGTTGCCAACTTT+TGG - chr4.3:11132406-11132425 None:intergenic 35.0%
! ACATTGGTTGAAGCATTAGA+AGG + chr4.3:11135541-11135560 MS.gene030910:CDS 35.0%
! GATGACTCTAAGTTAACTTG+TGG + chr4.3:11137105-11137124 MS.gene030910:CDS 35.0%
! GCTTTCTGTAACATCTTTTC+CGG + chr4.3:11136356-11136375 MS.gene030910:intron 35.0%
! GGATAATGATGGAAAAAGAG+AGG + chr4.3:11135293-11135312 MS.gene030910:CDS 35.0%
! GTACACCATACCATACTTTT+GGG - chr4.3:11134401-11134420 None:intergenic 35.0%
! TAGGGCATCTAAAATTCTAC+CGG - chr4.3:11132341-11132360 None:intergenic 35.0%
! TCCAAATGTCATCGTGATTT+TGG - chr4.3:11134666-11134685 None:intergenic 35.0%
! TCTAAAATTTCTGACCTAGG+TGG + chr4.3:11132056-11132075 MS.gene030910:intron 35.0%
! TGCATTACCTGAATAATGGA+TGG - chr4.3:11136880-11136899 None:intergenic 35.0%
! TTTTAGGCACGAAACAAACA+TGG + chr4.3:11132640-11132659 MS.gene030910:CDS 35.0%
!! ACTGCTTGTGTTGATTTGTT+TGG + chr4.3:11134203-11134222 MS.gene030910:intron 35.0%
!! ATCCTTACTTTTGACAGACA+AGG + chr4.3:11135272-11135291 MS.gene030910:intron 35.0%
!! CAAATCAACTTGCTGAATAC+GGG - chr4.3:11133193-11133212 None:intergenic 35.0%
!! CCATATGATTGGTTTATGCA+TGG + chr4.3:11134925-11134944 MS.gene030910:CDS 35.0%
!! CTAGTAACTTTTTCCGCATA+TGG - chr4.3:11135994-11136013 None:intergenic 35.0%
!! CTTTTTGTGTTGTGGATTGA+TGG - chr4.3:11132684-11132703 None:intergenic 35.0%
!! GCAAATCAACTTGCTGAATA+CGG - chr4.3:11133194-11133213 None:intergenic 35.0%
!! GGTTCTGCATTATGTTTTGA+AGG + chr4.3:11133773-11133792 MS.gene030910:CDS 35.0%
!! GTTGTTATTTGGATCTGCTA+AGG + chr4.3:11135008-11135027 MS.gene030910:CDS 35.0%
!! GTTGTTTTGCTCATGTGAAA+TGG + chr4.3:11135474-11135493 MS.gene030910:CDS 35.0%
!! TCCTCAGACTTAAGTATTGA+AGG - chr4.3:11134790-11134809 None:intergenic 35.0%
!! TTAAGAGGTACCTCAAATGT+TGG - chr4.3:11132945-11132964 None:intergenic 35.0%
!!! ATTTCTTGGCCCTTTTTTCA+GGG + chr4.3:11136533-11136552 MS.gene030910:CDS 35.0%
!!! TCCTCATTGCTGCTATTTTT+TGG + chr4.3:11134527-11134546 MS.gene030910:intron 35.0%
AAAAGATCGCCTTCTTGTAC+AGG + chr4.3:11135694-11135713 MS.gene030910:CDS 40.0%
AAAATTTCTGACCTAGGTGG+TGG + chr4.3:11132059-11132078 MS.gene030910:intron 40.0%
AAAGTATGGTATGGTGTACC+TGG + chr4.3:11134402-11134421 MS.gene030910:CDS 40.0%
AACTTCTCGTACACCTTATG+TGG + chr4.3:11135804-11135823 MS.gene030910:CDS 40.0%
AAGTATGGTATGGTGTACCT+GGG + chr4.3:11134403-11134422 MS.gene030910:CDS 40.0%
AATACTAATCACCACCACCT+AGG - chr4.3:11132073-11132092 None:intergenic 40.0%
AATAGAGAAACCGACTGATG+AGG + chr4.3:11133530-11133549 MS.gene030910:CDS 40.0%
ACATTAGTTGGACATGGTGA+AGG - chr4.3:11136087-11136106 None:intergenic 40.0%
ACCAAATCTACTCAACGAGT+TGG + chr4.3:11134488-11134507 MS.gene030910:CDS 40.0%
ACCAACTCGTTGAGTAGATT+TGG - chr4.3:11134492-11134511 None:intergenic 40.0%
ACTACATACCCAGCAAAATG+AGG - chr4.3:11133852-11133871 None:intergenic 40.0%
AGAAATGCTTGTGGGAAAGA+TGG + chr4.3:11135096-11135115 MS.gene030910:CDS 40.0%
AGTGATGCCAAAGATGGTAA+AGG + chr4.3:11133438-11133457 MS.gene030910:CDS 40.0%
ATCCCAGTCATGAATGTGTA+GGG + chr4.3:11137034-11137053 MS.gene030910:CDS 40.0%
ATCTTCAACATGCTGTTCCA+AGG - chr4.3:11134340-11134359 None:intergenic 40.0%
ATTTGTATGCTATGTCTGGC+TGG + chr4.3:11133723-11133742 MS.gene030910:CDS 40.0%
CAAAGATGGGAACGTGTAAT+AGG + chr4.3:11133277-11133296 MS.gene030910:CDS 40.0%
CAGCTATAGAAGATGCAATG+AGG + chr4.3:11134436-11134455 MS.gene030910:CDS 40.0%
CAGTCACATTTCTTCAGAGT+TGG + chr4.3:11135759-11135778 MS.gene030910:CDS 40.0%
CATCTTCTATAGCTGAAGCA+TGG - chr4.3:11134431-11134450 None:intergenic 40.0%
CATGAAGAGTTGTCTCTGAA+AGG - chr4.3:11135047-11135066 None:intergenic 40.0%
CCGGAATTTCGAACATTAGT+TGG - chr4.3:11136099-11136118 None:intergenic 40.0%
CCTTCAATATCCTCCAAAGA+CGG - chr4.3:11133495-11133514 None:intergenic 40.0%
CTGCAAATGCACTCAGATTT+AGG + chr4.3:11136153-11136172 MS.gene030910:CDS 40.0%
CTTGTACAGGAACTAATGAG+AGG + chr4.3:11135707-11135726 MS.gene030910:CDS 40.0%
CTTTCAGAGACAACTCTTCA+TGG + chr4.3:11135045-11135064 MS.gene030910:CDS 40.0%
GAAAGGGGTTCAAATCAAAG+AGG - chr4.3:11135167-11135186 None:intergenic 40.0%
GAATAGCCTATGTTTGGCAT+TGG + chr4.3:11132112-11132131 MS.gene030910:intron 40.0%
GATGGACAATGACTTCGATT+CGG + chr4.3:11135351-11135370 MS.gene030910:CDS 40.0%
GGGGATACAATCATGAACTT+AGG - chr4.3:11132360-11132379 None:intergenic 40.0%
GGTTCAAATCAAAGAGGAGA+GGG - chr4.3:11135161-11135180 None:intergenic 40.0%
GGTTCAAGTAATAGCTCTCT+AGG + chr4.3:11137126-11137145 MS.gene030910:CDS 40.0%
GGTTGCTCTTCAAACAAATC+AGG - chr4.3:11134471-11134490 None:intergenic 40.0%
GTGTGGGAAACTAGAAACAT+TGG + chr4.3:11135583-11135602 MS.gene030910:CDS 40.0%
GTGTTTGTGAAAACCTCGTT+GGG - chr4.3:11136715-11136734 None:intergenic 40.0%
TAACAAATTCCCCAGAATGC+TGG - chr4.3:11134834-11134853 None:intergenic 40.0%
TACCCTACACATTCATGACT+GGG - chr4.3:11137039-11137058 None:intergenic 40.0%
TATTATCACGCCAAAGAGGT+TGG + chr4.3:11131696-11131715 MS.gene030910:intron 40.0%
TCGCGGATCGTAAAAAAAAG+CGG - chr4.3:11132172-11132191 None:intergenic 40.0%
TCTGAAGAAATGTGACTGTG+AGG - chr4.3:11135757-11135776 None:intergenic 40.0%
TGAATGTGGCTCCATATGAT+TGG + chr4.3:11134914-11134933 MS.gene030910:CDS 40.0%
TGCATATTATCACGCCAAAG+AGG + chr4.3:11131692-11131711 MS.gene030910:CDS 40.0%
TGGAAAAAGAGAGGCTTGAA+TGG + chr4.3:11135302-11135321 MS.gene030910:CDS 40.0%
TGTTTGTGAAAACCTCGTTG+GGG - chr4.3:11136714-11136733 None:intergenic 40.0%
TTAGTTCCATGGCTGTATGT+TGG + chr4.3:11133815-11133834 MS.gene030910:CDS 40.0%
TTCTGATCGCATCTTTGTAC+AGG + chr4.3:11134750-11134769 MS.gene030910:intron 40.0%
TTGAAGGAAGTGACATCTCA+GGG + chr4.3:11133789-11133808 MS.gene030910:CDS 40.0%
TTGCATGCACGAACAAGATA+TGG + chr4.3:11135633-11135652 MS.gene030910:CDS 40.0%
TTTGAAGGAAGTGACATCTC+AGG + chr4.3:11133788-11133807 MS.gene030910:CDS 40.0%
! ACAGGTGTTTCACCGATTAT+AGG - chr4.3:11132915-11132934 None:intergenic 40.0%
! AGTTTGGGATCTGTTGTGTA+TGG + chr4.3:11136291-11136310 MS.gene030910:CDS 40.0%
! GGTACACCATACCATACTTT+TGG - chr4.3:11134402-11134421 None:intergenic 40.0%
! GTGCTTTTCCTCATTTTGCT+GGG + chr4.3:11133841-11133860 MS.gene030910:CDS 40.0%
! TGTGCTTTTCCTCATTTTGC+TGG + chr4.3:11133840-11133859 MS.gene030910:CDS 40.0%
!! AGTTGTTTCTGCTAGTGTTG+AGG + chr4.3:11135606-11135625 MS.gene030910:CDS 40.0%
!! GTTACAGAAAGCGTACCTTT+TGG - chr4.3:11136348-11136367 None:intergenic 40.0%
!! TCGGTTGAGCTTGTTAGTTT+GGG + chr4.3:11136276-11136295 MS.gene030910:CDS 40.0%
!! TGGTGTCGATTTGATAAAGC+TGG + chr4.3:11137170-11137189 MS.gene030910:CDS 40.0%
!! TGTACTATAGATTTTGGCGG+TGG + chr4.3:11132977-11132996 MS.gene030910:intron 40.0%
!! TGTCGATTTGATAAAGCTGG+AGG + chr4.3:11137173-11137192 MS.gene030910:CDS 40.0%
!! TTCGGTTGAGCTTGTTAGTT+TGG + chr4.3:11136275-11136294 MS.gene030910:CDS 40.0%
!!! ACTTTTTCATTGGGGAGCTT+TGG - chr4.3:11136248-11136267 None:intergenic 40.0%
!!! GATTTCTTGGCCCTTTTTTC+AGG + chr4.3:11136532-11136551 MS.gene030910:CDS 40.0%
AACAAGACACGTGCTCAACA+CGG - chr4.3:11132724-11132743 None:intergenic 45.0%
AACCACGTGCAATAGAAGTG+TGG + chr4.3:11135566-11135585 MS.gene030910:CDS 45.0%
AATAACTTTGCGCGACTTCC+AGG + chr4.3:11133752-11133771 MS.gene030910:CDS 45.0%
ACACCTTATGTGGATCTGAC+TGG + chr4.3:11135814-11135833 MS.gene030910:CDS 45.0%
ACGTGGAAAGCAGTCAAAGA+TGG + chr4.3:11133263-11133282 MS.gene030910:CDS 45.0%
ACTGGGATCTTGAGCTTCAA+TGG - chr4.3:11137022-11137041 None:intergenic 45.0%
AGCCGATGAGGAAGAAAAGT+AGG + chr4.3:11133226-11133245 MS.gene030910:CDS 45.0%
ATGCCATACGGTTCAGCTAA+GGG - chr4.3:11133087-11133106 None:intergenic 45.0%
ATGTTGTGCAGTAGCTCCAA+GGG - chr4.3:11136826-11136845 None:intergenic 45.0%
ATTACCTCGACCTCATCAGT+CGG - chr4.3:11133543-11133562 None:intergenic 45.0%
CACATTCCAACATACAGCCA+TGG - chr4.3:11133824-11133843 None:intergenic 45.0%
CATGGGACAAGGATGTCTTA+CGG - chr4.3:11134984-11135003 None:intergenic 45.0%
CCTTTCGCCATCCATTATTC+AGG + chr4.3:11136870-11136889 MS.gene030910:CDS 45.0%
CGAAATTCCGGTACACTTGA+TGG + chr4.3:11136108-11136127 MS.gene030910:CDS 45.0%
CGATTTGATAAAGCTGGAGG+AGG + chr4.3:11137176-11137195 MS.gene030910:CDS 45.0%
CGTGGAAAGCAGTCAAAGAT+GGG + chr4.3:11133264-11133283 MS.gene030910:CDS 45.0%
CTAAGGGACGTATCTTAGCT+AGG - chr4.3:11133071-11133090 None:intergenic 45.0%
GAAGCATGTCGGCCTATAAT+CGG + chr4.3:11132900-11132919 MS.gene030910:CDS 45.0%
GATCCCAGTCATGAATGTGT+AGG + chr4.3:11137033-11137052 MS.gene030910:CDS 45.0%
GCCATACCAATGCCAAACAT+AGG - chr4.3:11132121-11132140 None:intergenic 45.0%
GCCGATGAGGAAGAAAAGTA+GGG + chr4.3:11133227-11133246 MS.gene030910:CDS 45.0%
GGAACGTGTAATAGGAGAAC+TGG + chr4.3:11133285-11133304 MS.gene030910:CDS 45.0%
GGGTTCAAATCAAAGAGGAG+AGG - chr4.3:11135162-11135181 None:intergenic 45.0%
GGTGTATTATGGAGCTGACT+TGG + chr4.3:11133640-11133659 MS.gene030910:intron 45.0%
GGTGTTCTTCCAAAGTAACC+TGG - chr4.3:11136693-11136712 None:intergenic 45.0%
GGTGTTTGTGAAAACCTCGT+TGG - chr4.3:11136716-11136735 None:intergenic 45.0%
GGTTAAGAGGGGCAGAATTA+GGG - chr4.3:11132202-11132221 None:intergenic 45.0%
GTACCCTACACATTCATGAC+TGG - chr4.3:11137040-11137059 None:intergenic 45.0%
GTCATGAATGTGTAGGGTAC+TGG + chr4.3:11137040-11137059 MS.gene030910:CDS 45.0%
GTCATTCCTGCTGGATTTCT+TGG + chr4.3:11136519-11136538 MS.gene030910:CDS 45.0%
GTTTGTGAAGTCATTCCTGC+TGG + chr4.3:11136510-11136529 MS.gene030910:CDS 45.0%
TAGGAGTTTGAAGACACGCT+TGG + chr4.3:11133042-11133061 MS.gene030910:intron 45.0%
TATGCCATACGGTTCAGCTA+AGG - chr4.3:11133088-11133107 None:intergenic 45.0%
TCACCAGTCAGATCCACATA+AGG - chr4.3:11135820-11135839 None:intergenic 45.0%
TCCCATCTGGATGATATCTG+CGG - chr4.3:11132873-11132892 None:intergenic 45.0%
TCTGCTAAGGAAGCTGTACA+TGG + chr4.3:11135021-11135040 MS.gene030910:CDS 45.0%
TCTTTCTCCTTAAGAGGGCA+AGG - chr4.3:11133144-11133163 None:intergenic 45.0%
TGAAGGAAGTGACATCTCAG+GGG + chr4.3:11133790-11133809 MS.gene030910:CDS 45.0%
TGAGGAAGAAAAGTAGGGCA+AGG + chr4.3:11133232-11133251 MS.gene030910:CDS 45.0%
TGTGGATCTGACTGGTGATA+TGG + chr4.3:11135822-11135841 MS.gene030910:CDS 45.0%
! ACCACGTGCAATAGAAGTGT+GGG + chr4.3:11135567-11135586 MS.gene030910:CDS 45.0%
! CCGTCTTTGGAGGATATTGA+AGG + chr4.3:11133492-11133511 MS.gene030910:CDS 45.0%
! CTGATGCACAATTGACTCAG+TGG + chr4.3:11137310-11137329 MS.gene030910:CDS 45.0%
! GACTCGAGGACCAAACTTTT+TGG + chr4.3:11137150-11137169 MS.gene030910:CDS 45.0%
! GCAGCAATGAGGAAAGTACA+AGG - chr4.3:11134520-11134539 None:intergenic 45.0%
! GGTGACCCAAAAGTATGGTA+TGG + chr4.3:11134393-11134412 MS.gene030910:CDS 45.0%
! TCTTGTGCGTGACATTTTGC+AGG + chr4.3:11132610-11132629 MS.gene030910:intron 45.0%
! TGCTGGTGGTATTTCTGTCT+TGG + chr4.3:11136053-11136072 MS.gene030910:CDS 45.0%
!! ACTTCGATTCGGTTGAGGAA+AGG + chr4.3:11135362-11135381 MS.gene030910:CDS 45.0%
!! CAATGACTTCGATTCGGTTG+AGG + chr4.3:11135357-11135376 MS.gene030910:CDS 45.0%
!! CCTGAATAATGGATGGCGAA+AGG - chr4.3:11136873-11136892 None:intergenic 45.0%
!! CTTCGATTCGGTTGAGGAAA+GGG + chr4.3:11135363-11135382 MS.gene030910:CDS 45.0%
!! GCCCTACTTTTCTTCCTCAT+CGG - chr4.3:11133231-11133250 None:intergenic 45.0%
!! GCCTATGTTTGGCATTGGTA+TGG + chr4.3:11132117-11132136 MS.gene030910:intron 45.0%
!! TATGGAGCTGACTTGGAAAC+TGG + chr4.3:11133647-11133666 MS.gene030910:CDS 45.0%
!! TCAACTTGCTGAATACGGGT+CGG - chr4.3:11133189-11133208 None:intergenic 45.0%
!!! TCTCAGGGGTTTTAGTTCCA+TGG + chr4.3:11133804-11133823 MS.gene030910:CDS 45.0%
!!! TTTTCTTCCTCATCGGCTCT+CGG - chr4.3:11133224-11133243 None:intergenic 45.0%
AAAGGGCCAAGAAATCCAGC+AGG - chr4.3:11136528-11136547 None:intergenic 50.0%
AAATTGTCCCTCCAGCTTGC+TGG + chr4.3:11133112-11133131 MS.gene030910:CDS 50.0%
AACATGCTGTTCCAAGGAGC+AGG - chr4.3:11134334-11134353 None:intergenic 50.0%
AAGCTGGAGGAGGATGACAT+AGG + chr4.3:11137186-11137205 MS.gene030910:CDS 50.0%
ACACCTCAGCAGATAAGTGC+TGG + chr4.3:11136731-11136750 MS.gene030910:CDS 50.0%
ACATGCTGTTCCAAGGAGCA+GGG - chr4.3:11134333-11134352 None:intergenic 50.0%
ACTGGGGTGACCCAAAAGTA+TGG + chr4.3:11134388-11134407 MS.gene030910:CDS 50.0%
AGAGAGGCTTGAATGGCTTC+CGG + chr4.3:11135309-11135328 MS.gene030910:CDS 50.0%
AGGAGCAGGGAATGAGAATG+CGG - chr4.3:11134320-11134339 None:intergenic 50.0%
AGGGCAAGGAAACGAAAACG+TGG + chr4.3:11133246-11133265 MS.gene030910:CDS 50.0%
ATAGCTCTCTAGGTGACTCG+AGG + chr4.3:11137136-11137155 MS.gene030910:CDS 50.0%
ATCGCACTGTCCAGCATTCT+GGG + chr4.3:11134821-11134840 MS.gene030910:CDS 50.0%
ATGTGACTGTGAGGACTGCT+AGG - chr4.3:11135748-11135767 None:intergenic 50.0%
CACCTCAGCAGATAAGTGCT+GGG + chr4.3:11136732-11136751 MS.gene030910:CDS 50.0%
CAGTGGCTTCAATTGTGCAG+AGG + chr4.3:11134888-11134907 MS.gene030910:CDS 50.0%
CATTCTCATTCCCTGCTCCT+TGG + chr4.3:11134320-11134339 MS.gene030910:intron 50.0%
GAGCTACTGCACAACATCGA+TGG + chr4.3:11136829-11136848 MS.gene030910:CDS 50.0%
GATGTTGTGCAGTAGCTCCA+AGG - chr4.3:11136827-11136846 None:intergenic 50.0%
GCCGCAGATATCATCCAGAT+GGG + chr4.3:11132869-11132888 MS.gene030910:intron 50.0%
GGGCACTTAAGTCGTGTAAC+CGG + chr4.3:11132319-11132338 MS.gene030910:intron 50.0%
GGGTTAAGAGGGGCAGAATT+AGG - chr4.3:11132203-11132222 None:intergenic 50.0%
GGGTTGAGTGATGCCAAAGA+TGG + chr4.3:11133432-11133451 MS.gene030910:CDS 50.0%
TATCGCACTGTCCAGCATTC+TGG + chr4.3:11134820-11134839 MS.gene030910:CDS 50.0%
TCCCACACTTCTATTGCACG+TGG - chr4.3:11135571-11135590 None:intergenic 50.0%
TCTATCAGCACTTTCAGCGC+AGG - chr4.3:11137339-11137358 None:intergenic 50.0%
TCTGGATGATATCTGCGGCA+TGG - chr4.3:11132868-11132887 None:intergenic 50.0%
TGAACTAGACATGCCTCCCT+TGG + chr4.3:11136807-11136826 MS.gene030910:CDS 50.0%
TGCCGCAGATATCATCCAGA+TGG + chr4.3:11132868-11132887 MS.gene030910:intron 50.0%
TTCCCAGCACTTATCTGCTG+AGG - chr4.3:11136737-11136756 None:intergenic 50.0%
TTCTCCTTAAGAGGGCAAGG+TGG - chr4.3:11133141-11133160 None:intergenic 50.0%
TTGTGCAGAGGCTGTGAATG+TGG + chr4.3:11134900-11134919 MS.gene030910:CDS 50.0%
TTTGGAAGAACACCCCAACG+AGG + chr4.3:11136699-11136718 MS.gene030910:CDS 50.0%
! AATTGTCCCTCCAGCTTGCT+GGG + chr4.3:11133113-11133132 MS.gene030910:CDS 50.0%
! CGTCAGGACTTCCCTTTTTC+AGG - chr4.3:11137260-11137279 None:intergenic 50.0%
! GAAACTGGAGCACTTGGAAG+TGG + chr4.3:11133662-11133681 MS.gene030910:CDS 50.0%
! GACTTGGAAACTGGAGCACT+TGG + chr4.3:11133656-11133675 MS.gene030910:CDS 50.0%
! TTTCCAAGGGCATACCACTG+TGG + chr4.3:11134859-11134878 MS.gene030910:CDS 50.0%
AAGACGGTTCACGTCTCTCG+TGG - chr4.3:11133479-11133498 None:intergenic 55.0%
AAGCCACAGTGGTATGCCCT+TGG - chr4.3:11134865-11134884 None:intergenic 55.0%
ACTCGCAACCAACAGCAGAG+AGG - chr4.3:11135417-11135436 None:intergenic 55.0%
ATAGCTGAAGCATGGCTCCC+AGG - chr4.3:11134423-11134442 None:intergenic 55.0%
ATAGGCCGACATGCTTCGAC+TGG - chr4.3:11132897-11132916 None:intergenic 55.0%
CGAGAGACGTGAACCGTCTT+TGG + chr4.3:11133479-11133498 MS.gene030910:CDS 55.0%
CGCATTGCTCGTAACTCGTC+AGG - chr4.3:11137276-11137295 None:intergenic 55.0%
CGTCCCTTAGCTGAACCGTA+TGG + chr4.3:11133081-11133100 MS.gene030910:CDS 55.0%
GAAACCGACTGATGAGGTCG+AGG + chr4.3:11133536-11133555 MS.gene030910:CDS 55.0%
GACTTGCACCTCTCTGCTGT+TGG + chr4.3:11135406-11135425 MS.gene030910:CDS 55.0%
GAGACGTGAACCGTCTTTGG+AGG + chr4.3:11133482-11133501 MS.gene030910:CDS 55.0%
GGGATCCAGTCGAAGCATGT+CGG + chr4.3:11132889-11132908 MS.gene030910:CDS 55.0%
GTGTGAAGTCTGGCCCTGAT+TGG - chr4.3:11133365-11133384 None:intergenic 55.0%
TACCACTGTGGCTTCAGCAG+TGG + chr4.3:11134871-11134890 MS.gene030910:CDS 55.0%
TCGCACTGTCCAGCATTCTG+GGG + chr4.3:11134822-11134841 MS.gene030910:CDS 55.0%
TGCTGGACAGTGCGATACAC+AGG - chr4.3:11134817-11134836 None:intergenic 55.0%
TGCTTCGACTGGATCCCATC+TGG - chr4.3:11132886-11132905 None:intergenic 55.0%
TTCAGAACCGAGAGCCGATG+AGG + chr4.3:11133214-11133233 MS.gene030910:CDS 55.0%
TTGTGCAGTAGCTCCAAGGG+AGG - chr4.3:11136823-11136842 None:intergenic 55.0%
AGCCACTGCTGAAGCCACAG+TGG - chr4.3:11134876-11134895 None:intergenic 60.0%
GGCTCCACCTTGCCCTCTTA+AGG + chr4.3:11133134-11133153 MS.gene030910:CDS 60.0%
CAAGGTGGAGCCCAGCAAGC+TGG - chr4.3:11133126-11133145 None:intergenic 65.0%
GTGGAGCCCAGCAAGCTGGA+GGG - chr4.3:11133122-11133141 None:intergenic 65.0%
GGTGGAGCCCAGCAAGCTGG+AGG - chr4.3:11133123-11133142 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 11131672 11137383 11131672 ID=MS.gene030910
chr4.3 mRNA 11131672 11137383 11131672 ID=MS.gene030910.t1;Parent=MS.gene030910
chr4.3 exon 11131672 11131713 11131672 ID=MS.gene030910.t1.exon1;Parent=MS.gene030910.t1
chr4.3 CDS 11131672 11131713 11131672 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11132632 11132703 11132632 ID=MS.gene030910.t1.exon2;Parent=MS.gene030910.t1
chr4.3 CDS 11132632 11132703 11132632 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11132876 11132953 11132876 ID=MS.gene030910.t1.exon3;Parent=MS.gene030910.t1
chr4.3 CDS 11132876 11132953 11132876 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11133045 11133557 11133045 ID=MS.gene030910.t1.exon4;Parent=MS.gene030910.t1
chr4.3 CDS 11133045 11133557 11133045 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11133641 11133862 11133641 ID=MS.gene030910.t1.exon5;Parent=MS.gene030910.t1
chr4.3 CDS 11133641 11133862 11133641 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11134348 11134509 11134348 ID=MS.gene030910.t1.exon6;Parent=MS.gene030910.t1
chr4.3 CDS 11134348 11134509 11134348 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11134772 11135140 11134772 ID=MS.gene030910.t1.exon7;Parent=MS.gene030910.t1
chr4.3 CDS 11134772 11135140 11134772 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11135289 11136351 11135289 ID=MS.gene030910.t1.exon8;Parent=MS.gene030910.t1
chr4.3 CDS 11135289 11136351 11135289 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11136451 11136554 11136451 ID=MS.gene030910.t1.exon9;Parent=MS.gene030910.t1
chr4.3 CDS 11136451 11136554 11136451 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11136694 11136891 11136694 ID=MS.gene030910.t1.exon10;Parent=MS.gene030910.t1
chr4.3 CDS 11136694 11136891 11136694 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
chr4.3 exon 11137018 11137383 11137018 ID=MS.gene030910.t1.exon11;Parent=MS.gene030910.t1
chr4.3 CDS 11137018 11137383 11137018 ID=cds.MS.gene030910.t1;Parent=MS.gene030910.t1
Gene Sequence

>MS.gene030910

ATGAAACAGTTGAAATTGGATGCATATTATCACGCCAAAGAGGTTGGTTTTTTTTGTACTTGGTTGGTACTGTTAAACCTTAAACAATGTCTTATGAATCCATGTTTCTAGAGTGTTATTTGTATACTTTGTTTTTAATTGATCACACATCAAATTTTCAGATCTTATCAATGTTGATGGAATTGAAAATTTATTGTTACTAACGTGCATATTATTTTTTGTCTTTTTTAATTCTTGCTTAAGACACTTTGATTGTGTTTTCTCTTGGAAGAGCTATTGTTGAATGATGTGTCATATTTTTGGATTAGCTATTGTGCTGAATTTATGATTTTTTCTAGGCCTATAATGGTTTATAATTTTTTTCTTTCTTGAGGTTTGAAAAGATCTAAAATTTCTGACCTAGGTGGTGGTGATTAGTATTGCCTTTGTTTTGGTTTTTGGAATAGCCTATGTTTGGCATTGGTATGGCCTGATTCTTTGATCATCTCATTTATGTACCGCTTTTTTTTACGATCCGCGATAAACAACCCTAATTCTGCCCCTCTTAACCCTCTTATTACTCATTGGCAACACGTCTAGTTTCTCTAGTTATCCCAACTCTCTCTAACTAACTAACTAACTATAACTCCTTTTTTCTCTAACATAAAGGGCACTTAAGTCGTGTAACCGGTAGAATTTTAGATGCCCTAAGTTCATGATTGTATCCCCATTTTGTATATACACTAGAAACTCCAAAAGTTGGCAACTTGTTGTTGAGTGTATTTTAGTGCATTCCCACTTCTAACCATTTACATTTCAATCTCTTGGAAATTAAGCTATTACAGTGTTTGTATCATGCATCCTTTTGTTGTTTGAGCTGTAGTAACATTAATGACATACTCTAGTAGATTTAATGTTTATTTCATGTCTATTTTTTCTTTCAGTTGGCAAATTAGCATTCTTGTGCGTGACATTTTGCAGGATAATCCTTTTAGGCACGAAACAAACATGGAAAATACACTTGAATCTTCCATCAATCCACAACACAAAAAGGTATTTACTATGTTCTACCGTGTTGAGCACGTGTCTTGTTATACTCATTGAAGTCATTAACTAAATTATGTTTTTCAAACATTTTTCCTATAAATATATGTTTAGATATTCAAACGAAAAAGATTTTGAAATTGAATGTAACATGGTTATATATACTGTTGCCATGCCGCAGATATCATCCAGATGGGATCCAGTCGAAGCATGTCGGCCTATAATCGGTGAAACACCTGTGTTTTATCCAACATTTGAGGTACCTCTTAATTATCACTATCATGTACTATAGATTTTGGCGGTGGTAACATTGTTCTGTGAATCAATTTTAATTTTATTCTTCTCATTAGGAGTTTGAAGACACGCTTGGTTACCTAGCTAAGATACGTCCCTTAGCTGAACCGTATGGCATATGTAAAATTGTCCCTCCAGCTTGCTGGGCTCCACCTTGCCCTCTTAAGGAGAAAGAGATATGGGAAAATGCTAAATTTCCGACCCGTATTCAGCAAGTTGATTTGCTTCAGAACCGAGAGCCGATGAGGAAGAAAAGTAGGGCAAGGAAACGAAAACGTGGAAAGCAGTCAAAGATGGGAACGTGTAATAGGAGAACTGGAAATTCATGTTCTGAAGCTAATGCTACTTCTGAATCTGATGATAAGTTTGGATTCCAATCAGGGCCAGACTTCACACTCAAAGAATTTCAGCAATATGGAAATTCTTTTAAAGATTGCTACTTCGGGTTGAGTGATGCCAAAGATGGTAAAGGTAGTGATAATAATCACCACGAGAGACGTGAACCGTCTTTGGAGGATATTGAAGGTGAATACTGGCGAATAATAGAGAAACCGACTGATGAGGTCGAGGTAATATTGTTGACAACATTGTTGGTTTTCAATGTAACATGTTTAAGAAAAAAAGTTTATATATTACTATACGATTTCTGTAGGTGTATTATGGAGCTGACTTGGAAACTGGAGCACTTGGAAGTGGTTTTCCTAAGACATCATCCTTAACTGAGAGTGATTCAGATTTGTATGCTATGTCTGGCTGGAATTTGAATAACTTTGCGCGACTTCCAGGTTCTGCATTATGTTTTGAAGGAAGTGACATCTCAGGGGTTTTAGTTCCATGGCTGTATGTTGGAATGTGCTTTTCCTCATTTTGCTGGGTATGTAGTGAGAATTAATTTTTTGTTAGTCTTTTTTATATGAATGAAGAAAAGTTTAAGGCGTAGAAAACAATATCACTGATTTTTTTTTTTCTTTTCAGTTTGCATGTCTTCCTGTAGAGTTATATGTTTTTTTTTTCCATGAAAGCTAAGTTGACAAATTTAAGGTTTGCTACTTTGCTCATTTTATAATAATTATAATCTAATTGAAGGTTAATGGAGAAAATAATTAGCTCGAACTACTTTAGACTAGAGAGAGATTGCTACCAATGCGATCATCAAATGATTTCTAATATTATAGATTTTTCAGTATGTAAGCACTCATAATATTTAAGGTTTCACTGCTTGTGTTGATTTGTTTGGAATGTTAACATATAACATAAGAAATAATATCTTGAACTTTGCATTACTTTTGTTTCAAATCTTTATACTTTCCTATAAAGAGTAATTAACACCGCATTCTCATTCCCTGCTCCTTGGAACAGCATGTTGAAGATCATCACCTCTATTCACTTAATTATCTGCACTGGGGTGACCCAAAAGTATGGTATGGTGTACCTGGGAGCCATGCTTCAGCTATAGAAGATGCAATGAGGAAACATTTGCCTGATTTGTTTGAAGAGCAACCAAATCTACTCAACGAGTTGGTATGATCCTTGTACTTTCCTCATTGCTGCTATTTTTTGGTTTCTTTTGCGCACTTTATCGTTTCCATGTACATAATTCGTGAACAAAGAGACATAGTTGATGCATAATGTATATTTTGTAGGCAGTTGCACTTATGAAAGTTAATTAAAAAACCAAAATCACGATGACATTTGGAATGTTCAAATTTTATATATCTTGATAAGTCTTTCCTTATTTTATATATCTTCTGATTGTAGTGGTTCTGATCGCATCTTTGTACAGGTGACTCAGTTCTCTCCTTCAATACTTAAGTCTGAGGAGGTTCCTGTGTATCGCACTGTCCAGCATTCTGGGGAATTTGTTATCACGTTTCCAAGGGCATACCACTGTGGCTTCAGCAGTGGCTTCAATTGTGCAGAGGCTGTGAATGTGGCTCCATATGATTGGTTTATGCATGGTCAGAACGCTGCAGAGATTTACAGTCTACAGTGCCGTAAGACATCCTTGTCCCATGATAAGTTGTTATTTGGATCTGCTAAGGAAGCTGTACATGGCCTTTCAGAGACAACTCTTCATGGAAAAGAAAATCTAAAATGTTTAAATTGGAGAAATGCTTGTGGGAAAGATGGTGTTCTTACCAATGCAGTTAAGGTAATGATTTTTGTGTGCCCTCTCCTCTTTGATTTGAACCCCTTTCATATATTTAGAAAAATCCGTAAAACTTTGGATGGTATTTATTATTTGATTTTATTTACCTTTTTTGTTTATATTTTTGTGTAATTATCCTTACTTTTGACAGACAAGGATAATGATGGAAAAAGAGAGGCTTGAATGGCTTCCGGATCATTTAAAGATGCTGAAGATGGACAATGACTTCGATTCGGTTGAGGAAAGGGAATGTTACTATTGCTTCTATGACTTGCACCTCTCTGCTGTTGGTTGCGAGTGCTTTCCTGATAACTATTCTTGTCTTAGACATTTCAAGTTGTTTTGCTCATGTGAAATGGATAAAAGATTTGTTCTGGTTCGTTATACAATAGATGAGCTAAGTACATTGGTTGAAGCATTAGAAGGAGAACCACGTGCAATAGAAGTGTGGGAAACTAGAAACATTGGAGTTGTTTCTGCTAGTGTTGAGGATGCTTGCATGCACGAACAAGATATGGAGAGAGTCATGTGCAAAACTGAGAATTACAAAGAAGGGAAAAGATCGCCTTCTTGTACAGGAACTAATGAGAGGTTAAATTCAAATTTACCTAGCAGTCCTCACAGTCACATTTCTTCAGAGTTGGTCCATTCAGAGTCTCATCATGAAACTTCTCGTACACCTTATGTGGATCTGACTGGTGATATGGACAACTTGAATGATACTATGTTGGTCATGGACAATAAAGTTAAGGAGGATAAGGGAAGTTCTTTGTATTTGAATATTGGTGATATCTCTGATAAACCTGCAAATTCTTTGCTAAATATAGCCGAAATCCGTCACAATAAGTGTGTTCCATATGCGGAAAAAGTTACTAGTGCAGAGATCAGAAAAGAACTAGACAACATAGAACTTAATGCTGGTGGTATTTCTGTCTTGGAAAATGAACCTTCACCATGTCCAACTAATGTTCGAAATTCCGGTACACTTGATGGTTGTAAATTGTTTGGTGTCAATCTGCAAATGCACTCAGATTTAGGACAGAAACTTAATAGTATGCTTGAAACGGGAGTTCTAGACACCTCCAATACAAATATATCTTTGACAAACCAAAGCTCCCCAATGAAAAAGTTTAGTATTTCGGTTGAGCTTGTTAGTTTGGGATCTGTTGTGTATGGAAAACATTGGTGCAGTAAGCATGCAATATATCCAAAAGGTACGCTTTCTGTAACATCTTTTCCGGTCTTAGATTGTTCTTTTATTTTTTTTTATTTTTGAGTTTAACTTTTCTTTTTCTTTTGGTGAAATTATGAAGGATTCAAGAGTCGTGTAAAGTTCTTTAGCATTCTTGATCCATCAAGCATCTGTAACTATGTTTGTGAAGTCATTCCTGCTGGATTTCTTGGCCCTTTTTTCAGGGTATCATTCCTGACCTTGTTTCTGTTTTAAGCTCAAAATCATATTGACATGTTTCTGTTACTAGATATATGTTATTTGCATTGACTTGTATTGCGATTGAAGTATATTTCTTTCTCTTTCAATAAAAAATATATTCCAGGTTACTTTGGAAGAACACCCCAACGAGGTTTTCACAAACACCTCAGCAGATAAGTGCTGGGAATCTGTTATTGATAGACTAAACTATGAAATAAATAAGCGCAAGAGTCTCGGTGAACTAGACATGCCTCCCTTGGAGCTACTGCACAACATCGATGGTCATAAAATGTTTGGATTCCTTTCGCCATCCATTATTCAGGTAATGCAAACTCGCAAAATCTTTAAGACGTTAATGTCCTTTTTTAGCTTACACCTAACATTAGTACCATAGACGTATATATTATAAGTTTTGATGTTTCTAATCCATTATGATAAACTGTTTCAGTCCATTGAAGCTCAAGATCCCAGTCATGAATGTGTAGGGTACTGGAATCACAAACAAGTTAATTCTGAATCTTCAGGCAAAGCCATTGATGACTCTAAGTTAACTTGTGGTTCAAGTAATAGCTCTCTAGGTGACTCGAGGACCAAACTTTTTGGTGTCGATTTGATAAAGCTGGAGGAGGATGACATAGGAGAAAGTTCTCATTCGTTTGAAGAGATGAAGTTGATTCTAGAAAGATTCCTGAAAAAGGGAAGTCCTGACGAGTTACGAGCAATGCGTCAGTTATTCAGTTCTGATGCACAATTGACTCAGTGGAGACCTGCGCTGAAAGTGCTGATAGAGAAAATCCAGAAAGATTGTGAATAA
Protein sequence

>MS.gene030910.t1

MKQLKLDAYYHAKEDNPFRHETNMENTLESSINPQHKKISSRWDPVEACRPIIGETPVFYPTFEEFEDTLGYLAKIRPLAEPYGICKIVPPACWAPPCPLKEKEIWENAKFPTRIQQVDLLQNREPMRKKSRARKRKRGKQSKMGTCNRRTGNSCSEANATSESDDKFGFQSGPDFTLKEFQQYGNSFKDCYFGLSDAKDGKGSDNNHHERREPSLEDIEGEYWRIIEKPTDEVEVYYGADLETGALGSGFPKTSSLTESDSDLYAMSGWNLNNFARLPGSALCFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGSHASAIEDAMRKHLPDLFEEQPNLLNELVTQFSPSILKSEEVPVYRTVQHSGEFVITFPRAYHCGFSSGFNCAEAVNVAPYDWFMHGQNAAEIYSLQCRKTSLSHDKLLFGSAKEAVHGLSETTLHGKENLKCLNWRNACGKDGVLTNAVKTRIMMEKERLEWLPDHLKMLKMDNDFDSVEERECYYCFYDLHLSAVGCECFPDNYSCLRHFKLFCSCEMDKRFVLVRYTIDELSTLVEALEGEPRAIEVWETRNIGVVSASVEDACMHEQDMERVMCKTENYKEGKRSPSCTGTNERLNSNLPSSPHSHISSELVHSESHHETSRTPYVDLTGDMDNLNDTMLVMDNKVKEDKGSSLYLNIGDISDKPANSLLNIAEIRHNKCVPYAEKVTSAEIRKELDNIELNAGGISVLENEPSPCPTNVRNSGTLDGCKLFGVNLQMHSDLGQKLNSMLETGVLDTSNTNISLTNQSSPMKKFSISVELVSLGSVVYGKHWCSKHAIYPKGFKSRVKFFSILDPSSICNYVCEVIPAGFLGPFFRVTLEEHPNEVFTNTSADKCWESVIDRLNYEINKRKSLGELDMPPLELLHNIDGHKMFGFLSPSIIQSIEAQDPSHECVGYWNHKQVNSESSGKAIDDSKLTCGSSNSSLGDSRTKLFGVDLIKLEEDDIGESSHSFEEMKLILERFLKKGSPDELRAMRQLFSSDAQLTQWRPALKVLIEKIQKDCE