AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene030989

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030989.t1 MTR_6g011450 98.333 840 14 0 1 840 1 840 0.0 1707
MS.gene030989.t1 MTR_6g011450 98.148 702 13 0 139 840 1 702 0.0 1427
MS.gene030989.t1 MTR_4g073340 75.180 556 99 5 285 840 5 521 0.0 753
MS.gene030989.t1 MTR_6g011470 70.612 245 37 2 569 813 1 210 2.16e-115 349
MS.gene030989.t1 MTR_7g103840 38.251 366 171 11 37 388 78 402 1.74e-60 223
MS.gene030989.t1 MTR_7g103840 37.356 174 105 3 645 816 847 1018 3.72e-33 138
MS.gene030989.t1 MTR_7g103840 38.251 366 171 11 37 388 76 400 1.92e-60 223
MS.gene030989.t1 MTR_7g103840 37.356 174 105 3 645 816 845 1016 3.05e-33 138
MS.gene030989.t1 MTR_1g061130 38.503 374 170 14 40 394 80 412 1.14e-56 211
MS.gene030989.t1 MTR_1g061130 35.057 174 107 4 645 814 838 1009 2.34e-30 129
MS.gene030989.t1 MTR_1g061130 38.503 374 170 14 40 394 80 412 1.63e-56 211
MS.gene030989.t1 MTR_1g061130 35.057 174 107 4 645 814 838 1009 2.62e-30 129
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene030989.t1 AT4G04885 46.127 865 363 20 1 840 22 808 0.0 643
MS.gene030989.t1 AT1G66500 35.598 368 156 16 496 821 68 396 9.09e-51 184
MS.gene030989.t1 AT2G36480 36.490 359 176 11 41 379 88 414 5.33e-50 191
MS.gene030989.t1 AT2G36480 32.778 180 112 3 637 816 777 947 7.38e-26 115
MS.gene030989.t1 AT2G36480 36.490 359 176 11 41 379 88 414 5.33e-50 191
MS.gene030989.t1 AT2G36480 32.778 180 112 3 637 816 777 947 7.38e-26 115
MS.gene030989.t1 AT5G43620 37.201 293 120 11 568 821 123 390 1.16e-46 172

Find 219 sgRNAs with CRISPR-Local

Find 413 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGATTATGGCCTAGTTAA+AGG 0.199059 6.2:+5620215 MS.gene030989:CDS
CACATAATGCACATGTATTT+TGG 0.204278 6.2:-5621743 None:intergenic
CAGCGTCACAATTTACTTAT+AGG 0.223072 6.2:+5620993 MS.gene030989:CDS
TCTATTTGTCTTACGTATCT+TGG 0.237116 6.2:-5619504 None:intergenic
TGCCTATCAATTCCAATTCT+TGG 0.268993 6.2:-5620113 None:intergenic
AAGAGTTGTTTCCGATTCTT+TGG 0.278868 6.2:-5621096 None:intergenic
CCCCATCATGCTGTTGATTA+TGG 0.284990 6.2:+5620203 MS.gene030989:CDS
AGCAGAAGCCCTCTCGTAAA+TGG 0.298225 6.2:+5621589 MS.gene030989:CDS
TCAGTGTCAAGGGTGTTTCC+TGG 0.301890 6.2:+5620617 MS.gene030989:CDS
GCTTACTGCCAGAAGTTTCT+TGG 0.305569 6.2:-5620394 None:intergenic
TAGGCATATGCCCTCATATA+TGG 0.310130 6.2:+5620130 MS.gene030989:CDS
CCTGATGGTTGATTATTAAC+TGG 0.310546 6.2:-5619423 None:intergenic
AGATGAAGAGTTGGCGGTTC+CGG 0.316370 6.2:+5621710 MS.gene030989:CDS
ATGCCTGTTGTTATTCCATT+AGG 0.318753 6.2:-5621840 None:intergenic
GATTGGGATGAGGTGGCATC+TGG 0.331410 6.2:-5621177 None:intergenic
TGAACAATTTCTTCTGTTGA+AGG 0.331657 6.2:-5616912 None:intergenic
GATTCGAATGGATTCCTAAC+AGG 0.333615 6.2:-5620761 None:intergenic
CTGCATTTAGCATGAATAAT+GGG 0.336904 6.2:-5621882 None:intergenic
TCTTTGACTGCCTTCTTCAT+AGG 0.346123 6.2:-5622555 None:intergenic
TGACGAACCTTCAGAGTATC+TGG 0.351247 6.2:-5621429 None:intergenic
TCTAGGAAGATTACCGTATA+AGG 0.356434 6.2:-5621469 None:intergenic
TCTGCTATGCGACATCTCTT+TGG 0.357635 6.2:+5619333 MS.gene030989:CDS
TTATTCCATTAGGCGCATTA+AGG 0.358655 6.2:-5621830 None:intergenic
TGGGATGGAGCATGTGGGCC+AGG 0.361701 6.2:-5621157 None:intergenic
TATGGCCTAGTTAAAGGATT+AGG 0.367937 6.2:+5620221 MS.gene030989:CDS
TCTGCATTTAGCATGAATAA+TGG 0.369592 6.2:-5621883 None:intergenic
CTATTTGTCTTACGTATCTT+GGG 0.379077 6.2:-5619503 None:intergenic
GTTTCATCCTCACAGGTTGC+AGG 0.381654 6.2:+5619984 MS.gene030989:intron
CCAACAGTTGGCTGTTGGTT+TGG 0.384623 6.2:-5621214 None:intergenic
TACGAGAGGGCTTCTGCTTA+CGG 0.385096 6.2:-5621584 None:intergenic
TAGGCATCAATTAGTGCTCT+TGG 0.388516 6.2:-5620356 None:intergenic
ATGACTCACAATGGTACTAT+TGG 0.398029 6.2:-5620792 None:intergenic
GGCAAAACAGGTCGTACATT+TGG 0.402384 6.2:-5621058 None:intergenic
CAGCTACCTAATCAGCTTCC+TGG 0.402588 6.2:+5620899 MS.gene030989:CDS
TCTGCAATCAGTGCCTTATA+CGG 0.402883 6.2:+5621456 MS.gene030989:CDS
TCTTCGTCACCACCAAGAAT+TGG 0.403612 6.2:+5620101 MS.gene030989:CDS
ACGTGGAGCATGCACATTTA+CGG 0.404948 6.2:-5620702 None:intergenic
GCTGATTAGGTAGCTGATAC+AGG 0.407419 6.2:-5620892 None:intergenic
GTGACTGCTGTGCTCGTCTT+GGG 0.407489 6.2:-5621523 None:intergenic
CGATTCTTTGGCCTGGCAAA+GGG 0.408289 6.2:-5621084 None:intergenic
AATCGACCAACGAGGATTGA+TGG 0.409969 6.2:-5616834 None:intergenic
AGAAACCGATAGTTGGTTGC+AGG 0.410939 6.2:-5620553 None:intergenic
CGCATAGCAGAATGTAAACT+TGG 0.411538 6.2:-5619321 None:intergenic
GGCTGTTGGTTTGGTACAAA+TGG 0.413907 6.2:-5621205 None:intergenic
TAAATAGTCATCCATATATG+AGG 0.415667 6.2:-5620141 None:intergenic
GACAAAAGCCAAGAAACTTC+TGG 0.416293 6.2:+5620386 MS.gene030989:CDS
GAAGATCTTCCAACCCTACT+TGG 0.416371 6.2:-5620083 None:intergenic
GACGGTGTTTGTACACTGTT+TGG 0.421276 6.2:-5620941 None:intergenic
AGAAGTATCGAACATATTCC+TGG 0.424947 6.2:-5619173 None:intergenic
TGTGACTGCTGTGCTCGTCT+TGG 0.427292 6.2:-5621524 None:intergenic
GGCAAAGGGAGTGGCAAAAC+AGG 0.429232 6.2:-5621070 None:intergenic
GGATTCTTCGATGGAAATAT+AGG 0.431337 6.2:-5620740 None:intergenic
CTTAGTGGTGCAGAGGCATT+GGG 0.433928 6.2:+5621633 MS.gene030989:CDS
CATCAGGTGTTAATTCCCTT+AGG 0.434375 6.2:+5619439 MS.gene030989:CDS
GACGTGGTTGTCCGTTACTA+AGG 0.434804 6.2:-5620328 None:intergenic
ATCAGACCAGGAAGCTGATT+AGG 0.435569 6.2:-5620905 None:intergenic
GTATACCTTAATGCGCCTAA+TGG 0.441302 6.2:+5621825 MS.gene030989:CDS
GGCATCTGGGATGGAGCATG+TGG 0.441310 6.2:-5621163 None:intergenic
GCATTGGCTGCAACAGTAGC+AGG 0.444681 6.2:-5620587 None:intergenic
CCGATTCTTTGGCCTGGCAA+AGG 0.444884 6.2:-5621085 None:intergenic
GCCATAATCAACAGCATGAT+GGG 0.449248 6.2:-5620204 None:intergenic
GCTTAGTGGTGCAGAGGCAT+TGG 0.449928 6.2:+5621632 MS.gene030989:CDS
TGGTACAAATGGACTAGGAT+TGG 0.450721 6.2:-5621194 None:intergenic
ACTGTTGGAAATGCAAATTT+CGG 0.451845 6.2:+5620029 MS.gene030989:CDS
TAAGTAAATTGTGACGCTGC+TGG 0.452433 6.2:-5620989 None:intergenic
GGTACAAATGGACTAGGATT+GGG 0.453506 6.2:-5621193 None:intergenic
AAAGAAAGAAGATGAAGAGT+TGG 0.454446 6.2:+5621701 MS.gene030989:CDS
GCTCGTCTTGGGATTTGAAT+CGG 0.457134 6.2:-5621512 None:intergenic
GCCTTTGTTAGTTGAGCGGC+TGG 0.457470 6.2:+5620415 MS.gene030989:CDS
ATCAGGTGTTAATTCCCTTA+GGG 0.459276 6.2:+5619440 MS.gene030989:CDS
GGAGCATGTGGGCCAGGTGG+AGG 0.459442 6.2:-5621151 None:intergenic
TGGAAATATAGGAGTTATGC+TGG 0.461860 6.2:-5620729 None:intergenic
AAACAGGTCGTACATTTGGC+AGG 0.462054 6.2:-5621054 None:intergenic
TCTTCCCTCCTTCTGTCTTA+CGG 0.462978 6.2:+5619370 MS.gene030989:CDS
TTCCATCGAAGAATCCTGTT+AGG 0.463431 6.2:+5620747 MS.gene030989:CDS
TTGGGAGCTGAATCAGCTCC+AGG 0.466055 6.2:+5621651 MS.gene030989:CDS
GGTTGTTCATGCACAGGAAA+AGG 0.471523 6.2:-5620830 None:intergenic
TCACTGTAAAACTCTTCAAA+AGG 0.472131 6.2:-5621771 None:intergenic
AGTCAATGAGATTACACCTT+GGG 0.472478 6.2:-5621266 None:intergenic
GAATCTCCTCGACCAACTCA+TGG 0.475030 6.2:+5619468 MS.gene030989:CDS
CTCTACCTAATCCTTTAACT+AGG 0.477129 6.2:-5620226 None:intergenic
GGTGAAAGGTTAGACTCAAC+AGG 0.478337 6.2:+5620005 MS.gene030989:CDS
TTGGCATTTATTGATTCGAA+TGG 0.478491 6.2:-5620773 None:intergenic
TTGAACAATCTCATTGCTCA+TGG 0.479291 6.2:-5616802 None:intergenic
ACTTATAGGCCATCTTTGCC+AGG 0.479835 6.2:+5621007 MS.gene030989:CDS
CTGAAGAAGAGGAGTTCGAT+TGG 0.483295 6.2:+5620483 MS.gene030989:CDS
CTTTGGCCTGGCAAAGGGAG+TGG 0.484334 6.2:-5621079 None:intergenic
GCTACCTTCACTCTATCTCT+TGG 0.484585 6.2:+5619128 MS.gene030989:CDS
CCAGTTAATAATCAACCATC+AGG 0.486016 6.2:+5619423 MS.gene030989:CDS
ATAGATTTAGTTACCTGTGA+AGG 0.488616 6.2:-5621298 None:intergenic
GGATAGAAATGGTATGGATA+AGG 0.494929 6.2:+5620436 MS.gene030989:CDS
CAACATCGTAATCATGCTAA+AGG 0.497052 6.2:+5617011 MS.gene030989:CDS
GCGCCTAATGGAATAACAAC+AGG 0.497466 6.2:+5621837 MS.gene030989:CDS
TGGTTTGGTACAAATGGACT+AGG 0.497504 6.2:-5621199 None:intergenic
TGTGGGCCAGGTGGAGGTAA+AGG 0.498674 6.2:-5621145 None:intergenic
TATTGTGAAGAATGTTGGCC+AGG 0.499257 6.2:+5619155 MS.gene030989:CDS
TTAGACTCAACAGGAACTGT+TGG 0.499630 6.2:+5620014 MS.gene030989:CDS
ATAGTAAGATCAGTGATGAT+AGG 0.500445 6.2:-5616978 None:intergenic
GGCCATAATCAACAGCATGA+TGG 0.502882 6.2:-5620205 None:intergenic
ACGGAGGAGTGGATGTATAG+AGG 0.502902 6.2:+5621798 MS.gene030989:CDS
GGCATGGACAGGTCGCAGTT+AGG 0.505187 6.2:+5621858 MS.gene030989:CDS
CCACAAGTTGTGCACTGTCT+AGG 0.505428 6.2:-5621486 None:intergenic
GGATGAGGTGGCATCTGGGA+TGG 0.507178 6.2:-5621172 None:intergenic
GGACCATGTCCTGGCAAAGA+TGG 0.508872 6.2:-5621016 None:intergenic
TGCGACATCTCTTTGGTACC+TGG 0.510544 6.2:+5619340 MS.gene030989:CDS
TAATTTGATTAATTCACTCA+TGG 0.510613 6.2:+5621243 MS.gene030989:CDS
TCTGATGAGAAACCGATAGT+TGG 0.513144 6.2:-5620560 None:intergenic
TAATCAATTTGTCCCAAGTA+GGG 0.514638 6.2:+5620070 MS.gene030989:CDS
CCTTTGCCAGGCCAAAGAAT+CGG 0.515014 6.2:+5621085 MS.gene030989:CDS
TATTTAGCTGACAATTCTAC+TGG 0.515482 6.2:+5620158 MS.gene030989:CDS
CACCAAGAATTGGAATTGAT+AGG 0.516933 6.2:+5620111 MS.gene030989:CDS
CAATTTGTCCCAAGTAGGGT+TGG 0.520932 6.2:+5620074 MS.gene030989:CDS
AGGCCATCTTTGCCAGGACA+TGG 0.522510 6.2:+5621013 MS.gene030989:CDS
TTGCGACCTTTACCTCCACC+TGG 0.523511 6.2:+5621139 MS.gene030989:CDS
GGAGTTATGCTGGGAGGACG+TGG 0.523802 6.2:-5620719 None:intergenic
TTGTTTCCGATTCTTTGGCC+TGG 0.524049 6.2:-5621091 None:intergenic
TAGATTTAGTTACCTGTGAA+GGG 0.527148 6.2:-5621297 None:intergenic
GTGTTTGTACACTGTTTGGC+GGG 0.527616 6.2:-5620937 None:intergenic
TGAAGAAGAGGAGTTCGATT+GGG 0.528053 6.2:+5620484 MS.gene030989:CDS
TGCCTCATTTCAAAAGCTGC+AGG 0.528790 6.2:-5620677 None:intergenic
AGAGCACTAATTGATGCCTA+TGG 0.528940 6.2:+5620359 MS.gene030989:CDS
CAAAATACATGTGCATTATG+TGG 0.529245 6.2:+5621744 MS.gene030989:CDS
AAAGCTGCAGGCAAAACTGT+TGG 0.529877 6.2:-5620665 None:intergenic
TTCCGACTATCACCAGAAAA+CGG 0.530968 6.2:-5620278 None:intergenic
GATGGAGCATGTGGGCCAGG+TGG 0.531436 6.2:-5621154 None:intergenic
GTTGAGCGGCTGGATAGAAA+TGG 0.532637 6.2:+5620425 MS.gene030989:CDS
CTATCAATTCCAATTCTTGG+TGG 0.538401 6.2:-5620110 None:intergenic
CCATCACAAAATCTTCAGAC+GGG 0.542472 6.2:-5621917 None:intergenic
GGTTTCCTGCAACCAACTAT+CGG 0.543300 6.2:+5620548 MS.gene030989:CDS
GAGGAGATTCAGAAGCCCTA+AGG 0.544074 6.2:-5619455 None:intergenic
AGCACAGCAGTCACATGGAT+TGG 0.544101 6.2:+5621532 MS.gene030989:CDS
GAAAGAAGATGAAGAGTTGG+CGG 0.544318 6.2:+5621704 MS.gene030989:CDS
AAATTAGAATATCCAACAGT+TGG 0.545058 6.2:-5621226 None:intergenic
GCATCTGGGATGGAGCATGT+GGG 0.545123 6.2:-5621162 None:intergenic
GGTGTTTGTACACTGTTTGG+CGG 0.545314 6.2:-5620938 None:intergenic
TTAATCAATTTGTCCCAAGT+AGG 0.545867 6.2:+5620069 MS.gene030989:CDS
CTCATAGCAGGACCATGTCC+TGG 0.548016 6.2:-5621025 None:intergenic
GACAGTATTGTGAAGAATGT+TGG 0.548430 6.2:+5619150 MS.gene030989:CDS
TGACACTGAAGAAGTTGCAT+TGG 0.548483 6.2:-5620603 None:intergenic
GAGAAGAAGAGTTGAGTGAG+TGG 0.550334 6.2:+5620246 MS.gene030989:CDS
GAATAACAACAGGCATGGAC+AGG 0.551052 6.2:+5621847 MS.gene030989:CDS
GCGGCTGGATAGAAATGGTA+TGG 0.551376 6.2:+5620430 MS.gene030989:CDS
GTAGACCATGGTAGAAGTAA+TGG 0.552062 6.2:+5620527 MS.gene030989:CDS
GACTAATCAAGCCCCTTCAC+AGG 0.552537 6.2:+5621285 MS.gene030989:CDS
CCTCACAGGTTGCAGGTGAA+AGG 0.553428 6.2:+5619991 MS.gene030989:intron
ATGCAACTTCTTCAGTGTCA+AGG 0.556856 6.2:+5620606 MS.gene030989:CDS
AATATCCAACAGTTGGCTGT+TGG 0.561780 6.2:-5621219 None:intergenic
CCAAACCAACAGCCAACTGT+TGG 0.562522 6.2:+5621214 MS.gene030989:CDS
ATCTTCCGTAAGACAGAAGG+AGG 0.562765 6.2:-5619375 None:intergenic
TTCCTAACAGGATTCTTCGA+TGG 0.563320 6.2:-5620749 None:intergenic
ATTGGGATGAGGTGGCATCT+GGG 0.564645 6.2:-5621176 None:intergenic
TGCAACTTCTTCAGTGTCAA+GGG 0.565136 6.2:+5620607 MS.gene030989:CDS
TATTTGCAACCGTATTGTTG+AGG 0.569428 6.2:+5617046 MS.gene030989:CDS
CTAAGGGAATTAACACCTGA+TGG 0.570154 6.2:-5619438 None:intergenic
TCCATCACAAAATCTTCAGA+CGG 0.571706 6.2:-5621918 None:intergenic
TGCAGCGGTTGTTCATGCAC+AGG 0.575485 6.2:-5620836 None:intergenic
TCAATATTTGAATTGAGACC+AGG 0.575901 6.2:-5620635 None:intergenic
ATTAATTCACTCATGGCCCA+AGG 0.576294 6.2:+5621250 MS.gene030989:CDS
AAGATCTTCCAACCCTACTT+GGG 0.576601 6.2:-5620082 None:intergenic
GTAAGCCTTTGTTAGTTGAG+CGG 0.577243 6.2:+5620411 MS.gene030989:CDS
AACAGGTCGTACATTTGGCA+GGG 0.583155 6.2:-5621053 None:intergenic
TAGCTGACAATTCTACTGGT+AGG 0.585559 6.2:+5620162 MS.gene030989:CDS
CCTAGACAGTGCACAACTTG+TGG 0.586792 6.2:+5621486 MS.gene030989:CDS
ATGGCAGAATACTGAAGAAG+AGG 0.586832 6.2:+5620472 MS.gene030989:CDS
ATGCAGGGTACCTATGAAGA+AGG 0.588267 6.2:+5622545 MS.gene030989:intron
AATAGTACCATTGTGAGTCA+TGG 0.588735 6.2:+5620794 MS.gene030989:CDS
ACAGGTCGTACATTTGGCAG+GGG 0.590048 6.2:-5621052 None:intergenic
AGATTTAGTTACCTGTGAAG+GGG 0.590367 6.2:-5621296 None:intergenic
GGACTAGGATTGGGATGAGG+TGG 0.594447 6.2:-5621184 None:intergenic
AGACGAGCACAGCAGTCACA+TGG 0.599845 6.2:+5621527 MS.gene030989:CDS
AGTGAGACGATGTGGCTTAG+TGG 0.601641 6.2:+5621618 MS.gene030989:CDS
AATCTCCTCGACCAACTCAT+GGG 0.602277 6.2:+5619469 MS.gene030989:CDS
GTTTGATCCAGATACTCTGA+AGG 0.602293 6.2:+5621422 MS.gene030989:CDS
AGGAGATTCAGAAGCCCTAA+GGG 0.603089 6.2:-5619454 None:intergenic
TAATGGAATAACAACAGGCA+TGG 0.604751 6.2:+5621842 MS.gene030989:CDS
TCAATCTTCCGTAAGACAGA+AGG 0.606789 6.2:-5619378 None:intergenic
CTCACAAACCATTTACGAGA+GGG 0.607148 6.2:-5621597 None:intergenic
GGAAACCATTACTTCTACCA+TGG 0.608961 6.2:-5620532 None:intergenic
TCCAGCCGCTCAACTAACAA+AGG 0.610598 6.2:-5620416 None:intergenic
CTACCATGGTCTACTACTGT+CGG 0.610600 6.2:-5620518 None:intergenic
GGGTTAGATGAAATCAGACC+AGG 0.611439 6.2:-5620917 None:intergenic
GGAAATATAGGAGTTATGCT+GGG 0.611878 6.2:-5620728 None:intergenic
TTAACATGTATCCCATGAGT+TGG 0.613297 6.2:-5619480 None:intergenic
TGTGACGCTGCTGGATCCTG+AGG 0.613390 6.2:-5620980 None:intergenic
AACGTCGTGAAGAAGATCCT+CGG 0.613895 6.2:+5616874 MS.gene030989:CDS
CCTCCACCATCAATCCTCGT+TGG 0.618578 6.2:+5616828 MS.gene030989:CDS
TGTATCCCATGAGTTGGTCG+AGG 0.619165 6.2:-5619474 None:intergenic
AAATAGTCATCCATATATGA+GGG 0.620923 6.2:-5620140 None:intergenic
CGACCAACGAGGATTGATGG+TGG 0.625674 6.2:-5616831 None:intergenic
GACGCTGCTGGATCCTGAGG+TGG 0.626580 6.2:-5620977 None:intergenic
CCAACGAGGATTGATGGTGG+AGG 0.631737 6.2:-5616828 None:intergenic
TTGTTCTCAACACCGTGCAG+CGG 0.634633 6.2:-5620851 None:intergenic
TGCATTTAGCATGAATAATG+GGG 0.635399 6.2:-5621881 None:intergenic
ACAGTGATGAAACGGAGGAG+TGG 0.635697 6.2:+5621787 MS.gene030989:CDS
GTGCATGAACAACCGCTGCA+CGG 0.638753 6.2:+5620839 MS.gene030989:CDS
CGTCTTGGGATTTGAATCGG+AGG 0.638892 6.2:-5621509 None:intergenic
AATGGACTAGGATTGGGATG+AGG 0.642770 6.2:-5621187 None:intergenic
TGTCTTACGGAAGATTGACG+TGG 0.654293 6.2:+5619383 MS.gene030989:CDS
ATAAGGTTATGACAACATCA+TGG 0.656509 6.2:+5620453 MS.gene030989:CDS
CTGTCCAAGAGATAGAGTGA+AGG 0.659112 6.2:-5619132 None:intergenic
CATCACAAAATCTTCAGACG+GGG 0.660499 6.2:-5621916 None:intergenic
ATGACATATAGCCTTAGTAA+CGG 0.660592 6.2:+5620317 MS.gene030989:CDS
CTGCAGGCAAAACTGTTGGA+CGG 0.661666 6.2:-5620661 None:intergenic
GATGTGGCTTAGTGGTGCAG+AGG 0.663497 6.2:+5621626 MS.gene030989:CDS
TAACCTACTTCGGGTAGACG+CGG 0.669168 6.2:-5619198 None:intergenic
CAGGTCGTACATTTGGCAGG+GGG 0.672238 6.2:-5621051 None:intergenic
GATTAGACCATGACTCACAA+TGG 0.673650 6.2:-5620801 None:intergenic
CCATAATCAACAGCATGATG+GGG 0.676024 6.2:-5620203 None:intergenic
GTTGGCGGTTCCGGCCGACG+AGG 0.678674 6.2:+5621719 MS.gene030989:CDS
ACTCACAAACCATTTACGAG+AGG 0.681960 6.2:-5621598 None:intergenic
AGTCCGACAGTAGTAGACCA+TGG 0.699248 6.2:+5620515 MS.gene030989:CDS
GGTTGCGAATTTCTCAACCG+AGG 0.700396 6.2:-5616891 None:intergenic
GCAGTCAAAGAAAACGAATG+CGG 0.700511 6.2:+5622567 MS.gene030989:CDS
TAGTCAATGAGATTACACCT+TGG 0.702598 6.2:-5621267 None:intergenic
GGTTTGTGAGTGAGACGATG+TGG 0.720083 6.2:+5621610 MS.gene030989:CDS
TCTTCCGTAAGACAGAAGGA+GGG 0.728444 6.2:-5619374 None:intergenic
AATATAGGAGTTATGCTGGG+AGG 0.735215 6.2:-5620725 None:intergenic
GTGCTTTGAATCGACCAACG+AGG 0.741742 6.2:-5616842 None:intergenic
TTTGCCAACCGAGACCACTG+AGG 0.774441 6.2:+5621677 MS.gene030989:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATTAATAATTGTTTATTT+GGG + chr6.2:5617298-5617317 MS.gene030989:intron 10.0%
!! TTGATTAATAATTGTTTATT+TGG + chr6.2:5617297-5617316 MS.gene030989:intron 10.0%
!! ACAAAATAACATATTAACAT+AGG - chr6.2:5618240-5618259 None:intergenic 15.0%
!! ACATAATATAATTACAAAGT+TGG - chr6.2:5621379-5621398 None:intergenic 15.0%
!! AGAAAAAATAGAAAAGAAAA+AGG - chr6.2:5618991-5619010 None:intergenic 15.0%
!! AGATATTTATAGAAAATGAT+AGG - chr6.2:5618503-5618522 None:intergenic 15.0%
!! ATAACAGAATTAAATCATTT+AGG - chr6.2:5619242-5619261 None:intergenic 15.0%
!! ATAATTTCGTGTAATAATAA+TGG + chr6.2:5617727-5617746 MS.gene030989:intron 15.0%
!! TAATTTCGTGTAATAATAAT+GGG + chr6.2:5617728-5617747 MS.gene030989:intron 15.0%
!! TCTTCTTATTAAGTTTATAT+GGG + chr6.2:5618674-5618693 MS.gene030989:intron 15.0%
!! TGTAATTATATTATGTTTGT+AGG + chr6.2:5621383-5621402 MS.gene030989:intron 15.0%
!! TTCTTCTTATTAAGTTTATA+TGG + chr6.2:5618673-5618692 MS.gene030989:intron 15.0%
!!! AAATATTTTAATTTCTGTTG+AGG + chr6.2:5619799-5619818 MS.gene030989:intron 15.0%
!!! TCTAAAATCAAAATTGATAT+GGG - chr6.2:5618793-5618812 None:intergenic 15.0%
!! AAATAAGTTTGATTCTTTGT+TGG + chr6.2:5618720-5618739 MS.gene030989:intron 20.0%
!! AATTTCGTGTAATAATAATG+GGG + chr6.2:5617729-5617748 MS.gene030989:intron 20.0%
!! ACTGAAAATACTATAATATC+TGG + chr6.2:5617847-5617866 MS.gene030989:intron 20.0%
!! ATAATTGTTTATTTGGGAAT+TGG + chr6.2:5617304-5617323 MS.gene030989:intron 20.0%
!! CAAAATCATTCAATTTATTC+AGG - chr6.2:5618109-5618128 None:intergenic 20.0%
!! CCTGAAAAATAATAAACAAT+TGG - chr6.2:5619092-5619111 None:intergenic 20.0%
!! CTAAAATCAAAATTGATATG+GGG - chr6.2:5618792-5618811 None:intergenic 20.0%
!! TAAGAATTGGTTAAAGAATT+CGG + chr6.2:5618854-5618873 MS.gene030989:intron 20.0%
!! TAATTTGATTAATTCACTCA+TGG + chr6.2:5621243-5621262 MS.gene030989:CDS 20.0%
!! TATTTATAGAAAATGATAGG+TGG - chr6.2:5618500-5618519 None:intergenic 20.0%
!!! AGTACTTAAAAATCGATTTT+TGG + chr6.2:5617647-5617666 MS.gene030989:intron 20.0%
!!! ATATCTGGAGTAATTTTTAA+AGG + chr6.2:5617862-5617881 MS.gene030989:intron 20.0%
!!! ATATTGAAAATTGCACATTT+TGG + chr6.2:5622223-5622242 MS.gene030989:intron 20.0%
!!! ATGTGCAATTTTCAATATAA+TGG - chr6.2:5622221-5622240 None:intergenic 20.0%
!!! CCAATTGTTTATTATTTTTC+AGG + chr6.2:5619089-5619108 MS.gene030989:intron 20.0%
!!! CTCTAAAATCAAAATTGATA+TGG - chr6.2:5618794-5618813 None:intergenic 20.0%
!!! TTGATAACATTGTTAACAAA+TGG + chr6.2:5617577-5617596 MS.gene030989:intron 20.0%
!!! TTTAGTTCATTTCATTTGAT+GGG + chr6.2:5617239-5617258 MS.gene030989:intron 20.0%
!!! TTTTAGTTCATTTCATTTGA+TGG + chr6.2:5617238-5617257 MS.gene030989:intron 20.0%
! AAAAGTTCTTACTGAATACA+AGG - chr6.2:5619862-5619881 None:intergenic 25.0%
! AAACAAAAACCTCAACAATA+CGG - chr6.2:5617058-5617077 None:intergenic 25.0%
! AAATAGTCATCCATATATGA+GGG - chr6.2:5620143-5620162 None:intergenic 25.0%
! AAATTACAATAACCTACTTC+GGG - chr6.2:5619210-5619229 None:intergenic 25.0%
! AAATTAGAATATCCAACAGT+TGG - chr6.2:5621229-5621248 None:intergenic 25.0%
! AAGTCACCAAAAGAATAATA+TGG - chr6.2:5622178-5622197 None:intergenic 25.0%
! ACAAACATTTCATCTGAAAA+GGG + chr6.2:5617891-5617910 MS.gene030989:intron 25.0%
! ACTAACTATTTCACTTTCAT+TGG - chr6.2:5617675-5617694 None:intergenic 25.0%
! ATAACTCTTAATCTGAACAA+TGG - chr6.2:5617109-5617128 None:intergenic 25.0%
! ATAATAGGAATTAGGAATTC+AGG + chr6.2:5617771-5617790 MS.gene030989:intron 25.0%
! ATTTAGTTGCGGATTTAATA+AGG + chr6.2:5619615-5619634 MS.gene030989:intron 25.0%
! CAAATTACAATAACCTACTT+CGG - chr6.2:5619211-5619230 None:intergenic 25.0%
! GAAATATATATGAAGTAAGC+TGG - chr6.2:5618214-5618233 None:intergenic 25.0%
! TAAATAGTCATCCATATATG+AGG - chr6.2:5620144-5620163 None:intergenic 25.0%
! TAAGTACTCAATTGTGTTAA+TGG - chr6.2:5617635-5617654 None:intergenic 25.0%
! TGAAATAGTTAGTGTATCAA+TGG + chr6.2:5617682-5617701 MS.gene030989:intron 25.0%
! TTTGTTGGAAAAATCATACA+GGG + chr6.2:5618735-5618754 MS.gene030989:intron 25.0%
!! ATTTTCCACAAAAATCACAT+TGG - chr6.2:5619717-5619736 None:intergenic 25.0%
!! GAATCAAACTTATTTCTCAT+TGG - chr6.2:5618715-5618734 None:intergenic 25.0%
!! GCTGAAATGATTAAGTATTT+TGG + chr6.2:5617933-5617952 MS.gene030989:intron 25.0%
!! TGTAATAATAATGGGGTTTA+CGG + chr6.2:5617736-5617755 MS.gene030989:intron 25.0%
!! TTAGTTTATTGCTATTCGAT+AGG + chr6.2:5617202-5617221 MS.gene030989:intron 25.0%
!! TTATGTTTGTAGGATTTTGT+TGG + chr6.2:5621393-5621412 MS.gene030989:intron 25.0%
!! TTTTCCACAAAAATCACATT+GGG - chr6.2:5619716-5619735 None:intergenic 25.0%
!!! TTATGTTTTTACTTTCCCAA+TGG + chr6.2:5622112-5622131 MS.gene030989:intron 25.0%
AAAACTGGTATGGATACATT+AGG - chr6.2:5618454-5618473 None:intergenic 30.0%
AAAGAAAGAAGATGAAGAGT+TGG + chr6.2:5621701-5621720 MS.gene030989:CDS 30.0%
AATAGTTAGTGTATCAATGG+TGG + chr6.2:5617685-5617704 MS.gene030989:intron 30.0%
AATGGGAACTTTGTAAGAAT+TGG + chr6.2:5618841-5618860 MS.gene030989:intron 30.0%
ACTGTTGGAAATGCAAATTT+CGG + chr6.2:5620029-5620048 MS.gene030989:CDS 30.0%
ACTTGCTTGGAGTAAATATT+AGG + chr6.2:5618143-5618162 MS.gene030989:intron 30.0%
AGCTTATGCTAGAAGATAAT+TGG + chr6.2:5618320-5618339 MS.gene030989:intron 30.0%
AGTCAAAAATGGAAGGAAAA+TGG - chr6.2:5621346-5621365 None:intergenic 30.0%
ATAAGGTTATGACAACATCA+TGG + chr6.2:5620453-5620472 MS.gene030989:CDS 30.0%
ATAGATTTAGTTACCTGTGA+AGG - chr6.2:5621301-5621320 None:intergenic 30.0%
ATAGTAAGATCAGTGATGAT+AGG - chr6.2:5616981-5617000 None:intergenic 30.0%
ATCAAAATTGATATGGGGTT+AGG - chr6.2:5618787-5618806 None:intergenic 30.0%
ATTCCTATTATATCCACCAT+AGG - chr6.2:5617762-5617781 None:intergenic 30.0%
CAAAATACATGTGCATTATG+TGG + chr6.2:5621744-5621763 MS.gene030989:CDS 30.0%
CTATTTGTCTTACGTATCTT+GGG - chr6.2:5619506-5619525 None:intergenic 30.0%
CTGCATTTAGCATGAATAAT+GGG - chr6.2:5621885-5621904 None:intergenic 30.0%
CTTTGTTGGAAAAATCATAC+AGG + chr6.2:5618734-5618753 MS.gene030989:intron 30.0%
GAAATAAACGAGAATGAACA+AGG + chr6.2:5618059-5618078 MS.gene030989:intron 30.0%
GAAGAAATATAGTTCAATGC+TGG - chr6.2:5622086-5622105 None:intergenic 30.0%
GACAAACATTTCATCTGAAA+AGG + chr6.2:5617890-5617909 MS.gene030989:intron 30.0%
GCTTATGCTAGAAGATAATT+GGG + chr6.2:5618321-5618340 MS.gene030989:intron 30.0%
GGATTTAATAAGGATGTGTT+TGG + chr6.2:5619625-5619644 MS.gene030989:intron 30.0%
GTAGTATAAGAAACGACAAT+TGG - chr6.2:5618532-5618551 None:intergenic 30.0%
GTCAAAAATGGAAGGAAAAT+GGG - chr6.2:5621345-5621364 None:intergenic 30.0%
TAAACCAATTAGTAGCATCT+GGG + chr6.2:5617366-5617385 MS.gene030989:intron 30.0%
TAATCAATTTGTCCCAAGTA+GGG + chr6.2:5620070-5620089 MS.gene030989:CDS 30.0%
TAGATTTAGTTACCTGTGAA+GGG - chr6.2:5621300-5621319 None:intergenic 30.0%
TATTTAGCTGACAATTCTAC+TGG + chr6.2:5620158-5620177 MS.gene030989:CDS 30.0%
TCAATATTTGAATTGAGACC+AGG - chr6.2:5620638-5620657 None:intergenic 30.0%
TCACAATATATTGCAACACT+AGG + chr6.2:5622349-5622368 MS.gene030989:intron 30.0%
TCACTGTAAAACTCTTCAAA+AGG - chr6.2:5621774-5621793 None:intergenic 30.0%
TCTATTTGTCTTACGTATCT+TGG - chr6.2:5619507-5619526 None:intergenic 30.0%
TCTGCATTTAGCATGAATAA+TGG - chr6.2:5621886-5621905 None:intergenic 30.0%
TGAACAATTTCTTCTGTTGA+AGG - chr6.2:5616915-5616934 None:intergenic 30.0%
TGAATGATGTTGTCAAATAC+CGG + chr6.2:5617416-5617435 MS.gene030989:intron 30.0%
TGCATTTAGCATGAATAATG+GGG - chr6.2:5621884-5621903 None:intergenic 30.0%
TTAAACCAATTAGTAGCATC+TGG + chr6.2:5617365-5617384 MS.gene030989:intron 30.0%
TTAATCAATTTGTCCCAAGT+AGG + chr6.2:5620069-5620088 MS.gene030989:CDS 30.0%
TTTAGACAAGCTGTTAACTA+AGG + chr6.2:5618282-5618301 MS.gene030989:intron 30.0%
TTTGCAAAACATGACATAGA+AGG - chr6.2:5622314-5622333 None:intergenic 30.0%
! AAACAACTCTTTTCATTTCC+AGG + chr6.2:5621108-5621127 MS.gene030989:CDS 30.0%
! AACAACTCTTTTCATTTCCA+GGG + chr6.2:5621109-5621128 MS.gene030989:CDS 30.0%
! AGAGTTTTACAGTGATGAAA+CGG + chr6.2:5621779-5621798 MS.gene030989:CDS 30.0%
! ATGACATATAGCCTTAGTAA+CGG + chr6.2:5620317-5620336 MS.gene030989:CDS 30.0%
! ATGGTGTGGAATTTTACAAA+AGG - chr6.2:5617090-5617109 None:intergenic 30.0%
! CAAAAACACGTTTTACCATT+GGG - chr6.2:5622130-5622149 None:intergenic 30.0%
! CAATGGTAAAACGTGTTTTT+GGG + chr6.2:5622129-5622148 MS.gene030989:intron 30.0%
! CACATAATGCACATGTATTT+TGG - chr6.2:5621746-5621765 None:intergenic 30.0%
! CATGATGTTATGATTTCTAG+TGG + chr6.2:5622460-5622479 MS.gene030989:intron 30.0%
! TATGTCATGTTTTGCAAATG+TGG + chr6.2:5622316-5622335 MS.gene030989:intron 30.0%
! TGGTGGATATAATAGGAATT+AGG + chr6.2:5617763-5617782 MS.gene030989:intron 30.0%
! TGGTGTGGAATTTTACAAAA+GGG - chr6.2:5617089-5617108 None:intergenic 30.0%
! TTTTGCAAATGTGGATATCA+TGG + chr6.2:5622325-5622344 MS.gene030989:intron 30.0%
!! AATGGTAAAACGTGTTTTTG+GGG + chr6.2:5622130-5622149 MS.gene030989:intron 30.0%
!! TTGGCATTTATTGATTCGAA+TGG - chr6.2:5620776-5620795 None:intergenic 30.0%
!!! AACTTTTTTCTACGTGAAAC+TGG + chr6.2:5619875-5619894 MS.gene030989:intron 30.0%
AACATTAGCGTATACTTGCT+TGG + chr6.2:5618130-5618149 MS.gene030989:intron 35.0%
AACTGCATCTCATTTAGTTG+CGG + chr6.2:5619604-5619623 MS.gene030989:intron 35.0%
AATAGTACCATTGTGAGTCA+TGG + chr6.2:5620794-5620813 MS.gene030989:CDS 35.0%
ACAAAAATCACATTGGGTTC+TGG - chr6.2:5619710-5619729 None:intergenic 35.0%
AGATTTAGTTACCTGTGAAG+GGG - chr6.2:5621299-5621318 None:intergenic 35.0%
AGTCAATGAGATTACACCTT+GGG - chr6.2:5621269-5621288 None:intergenic 35.0%
AGTTTCCACACTAAACTTAG+TGG - chr6.2:5618957-5618976 None:intergenic 35.0%
ATCAGGTGTTAATTCCCTTA+GGG + chr6.2:5619440-5619459 MS.gene030989:CDS 35.0%
ATGACTCACAATGGTACTAT+TGG - chr6.2:5620795-5620814 None:intergenic 35.0%
ATTGGAGACCATACAAATAG+CGG - chr6.2:5619074-5619093 None:intergenic 35.0%
CAACATCGTAATCATGCTAA+AGG + chr6.2:5617011-5617030 MS.gene030989:CDS 35.0%
CACCAAGAATTGGAATTGAT+AGG + chr6.2:5620111-5620130 MS.gene030989:CDS 35.0%
CAGCGTCACAATTTACTTAT+AGG + chr6.2:5620993-5621012 MS.gene030989:CDS 35.0%
CCAGTTAATAATCAACCATC+AGG + chr6.2:5619423-5619442 MS.gene030989:CDS 35.0%
CCTGATGGTTGATTATTAAC+TGG - chr6.2:5619426-5619445 None:intergenic 35.0%
CTATCAATTCCAATTCTTGG+TGG - chr6.2:5620113-5620132 None:intergenic 35.0%
CTCTACCTAATCCTTTAACT+AGG - chr6.2:5620229-5620248 None:intergenic 35.0%
GAAGTTAGCAGCGATTAAAT+AGG - chr6.2:5622432-5622451 None:intergenic 35.0%
GAATGATGTTGTCAAATACC+GGG + chr6.2:5617417-5617436 MS.gene030989:intron 35.0%
GACAGTATTGTGAAGAATGT+TGG + chr6.2:5619150-5619169 MS.gene030989:CDS 35.0%
GGAAATATAGGAGTTATGCT+GGG - chr6.2:5620731-5620750 None:intergenic 35.0%
GGATAGAAATGGTATGGATA+AGG + chr6.2:5620436-5620455 MS.gene030989:CDS 35.0%
GGATTCTTCGATGGAAATAT+AGG - chr6.2:5620743-5620762 None:intergenic 35.0%
GTACTCCTTGCAAAATACTT+TGG + chr6.2:5619577-5619596 MS.gene030989:intron 35.0%
GTTGATTATGGCCTAGTTAA+AGG + chr6.2:5620215-5620234 MS.gene030989:CDS 35.0%
TAATGGAATAACAACAGGCA+TGG + chr6.2:5621842-5621861 MS.gene030989:CDS 35.0%
TAGTCAATGAGATTACACCT+TGG - chr6.2:5621270-5621289 None:intergenic 35.0%
TATGGCCTAGTTAAAGGATT+AGG + chr6.2:5620221-5620240 MS.gene030989:CDS 35.0%
TATTTGCAACCGTATTGTTG+AGG + chr6.2:5617046-5617065 MS.gene030989:CDS 35.0%
TCACAAATCGCAGAAAATAG+TGG - chr6.2:5617557-5617576 None:intergenic 35.0%
TCCATCACAAAATCTTCAGA+CGG - chr6.2:5621921-5621940 None:intergenic 35.0%
TCCTTGCAAAATACTTTGGA+TGG + chr6.2:5619581-5619600 MS.gene030989:intron 35.0%
TCTAGGAAGATTACCGTATA+AGG - chr6.2:5621472-5621491 None:intergenic 35.0%
TCTTAATCTGAACAATGGTG+TGG - chr6.2:5617104-5617123 None:intergenic 35.0%
TGCCTATCAATTCCAATTCT+TGG - chr6.2:5620116-5620135 None:intergenic 35.0%
TGCTGTATCTTTGTCAACAT+TGG + chr6.2:5618600-5618619 MS.gene030989:intron 35.0%
TGGAAATATAGGAGTTATGC+TGG - chr6.2:5620732-5620751 None:intergenic 35.0%
TTAACATGTATCCCATGAGT+TGG - chr6.2:5619483-5619502 None:intergenic 35.0%
TTACAAAGTTCCCATTTCAG+AGG - chr6.2:5618837-5618856 None:intergenic 35.0%
TTATTCCATTAGGCGCATTA+AGG - chr6.2:5621833-5621852 None:intergenic 35.0%
! AAATCCTCACAGCTTTTCAT+CGG + chr6.2:5617986-5618005 MS.gene030989:intron 35.0%
! ACAACTCTTTTCATTTCCAG+GGG + chr6.2:5621110-5621129 MS.gene030989:CDS 35.0%
! AGAACCCAATGTGATTTTTG+TGG + chr6.2:5619709-5619728 MS.gene030989:intron 35.0%
! AGGGATTCTTACAGAAGTAT+TGG + chr6.2:5618754-5618773 MS.gene030989:intron 35.0%
! ATCTTCTTTCTTTTCCTCAG+TGG - chr6.2:5621694-5621713 None:intergenic 35.0%
! ATGCCTGTTGTTATTCCATT+AGG - chr6.2:5621843-5621862 None:intergenic 35.0%
! CCAAAAACACGTTTTACCAT+TGG - chr6.2:5622131-5622150 None:intergenic 35.0%
! CCAATGGTAAAACGTGTTTT+TGG + chr6.2:5622128-5622147 MS.gene030989:intron 35.0%
! CTAGAAGATAATTGGGTTGT+TGG + chr6.2:5618328-5618347 MS.gene030989:intron 35.0%
! GAAGAAATCTAGTTCAATGC+TGG - chr6.2:5622025-5622044 None:intergenic 35.0%
! GCAAGGAGTACAGATTTAAA+GGG - chr6.2:5619568-5619587 None:intergenic 35.0%
! GCATGATGAGTTATGTGTTT+TGG - chr6.2:5618914-5618933 None:intergenic 35.0%
! GGTGTGGAATTTTACAAAAG+GGG - chr6.2:5617088-5617107 None:intergenic 35.0%
! GTGTGGAATTTTACAAAAGG+GGG - chr6.2:5617087-5617106 None:intergenic 35.0%
! TATAGTTCTATTGTCTGCCT+AGG + chr6.2:5619269-5619288 MS.gene030989:intron 35.0%
! TGCAAGGAGTACAGATTTAA+AGG - chr6.2:5619569-5619588 None:intergenic 35.0%
!! AGAAGTATCGAACATATTCC+TGG - chr6.2:5619176-5619195 None:intergenic 35.0%
!! GCTTACGGTTTTTAGACATA+CGG - chr6.2:5621572-5621591 None:intergenic 35.0%
!! TCCATCCAAAGTATTTTGCA+AGG - chr6.2:5619585-5619604 None:intergenic 35.0%
!!! AAGATTTTGTGATGGACGAA+GGG + chr6.2:5621925-5621944 MS.gene030989:CDS 35.0%
!!! ATGGTAAAACGTGTTTTTGG+GGG + chr6.2:5622131-5622150 MS.gene030989:intron 35.0%
!!! TTTGATGGGTTTCACAGTTT+TGG + chr6.2:5617253-5617272 MS.gene030989:intron 35.0%
AAGAGTTCTCTGTTGCTAGA+GGG - chr6.2:5619928-5619947 None:intergenic 40.0%
AAGATCTTCCAACCCTACTT+GGG - chr6.2:5620085-5620104 None:intergenic 40.0%
AATATAGGAGTTATGCTGGG+AGG - chr6.2:5620728-5620747 None:intergenic 40.0%
AATATCCAACAGTTGGCTGT+TGG - chr6.2:5621222-5621241 None:intergenic 40.0%
ACATGCCACTAAGTTTAGTG+TGG + chr6.2:5618949-5618968 MS.gene030989:intron 40.0%
ACTCACAAACCATTTACGAG+AGG - chr6.2:5621601-5621620 None:intergenic 40.0%
ATAATATGGCTGCCGAATTC+TGG - chr6.2:5622164-5622183 None:intergenic 40.0%
ATATATTGCAACACTAGGCG+TGG + chr6.2:5622354-5622373 MS.gene030989:intron 40.0%
ATGCAACTTCTTCAGTGTCA+AGG + chr6.2:5620606-5620625 MS.gene030989:CDS 40.0%
ATGGCAGAATACTGAAGAAG+AGG + chr6.2:5620472-5620491 MS.gene030989:CDS 40.0%
ATTAATTCACTCATGGCCCA+AGG + chr6.2:5621250-5621269 MS.gene030989:CDS 40.0%
ATTGCCCAGATGCTACTAAT+TGG - chr6.2:5617373-5617392 None:intergenic 40.0%
CATCACAAAATCTTCAGACG+GGG - chr6.2:5621919-5621938 None:intergenic 40.0%
CATCAGGTGTTAATTCCCTT+AGG + chr6.2:5619439-5619458 MS.gene030989:CDS 40.0%
CCATAATCAACAGCATGATG+GGG - chr6.2:5620206-5620225 None:intergenic 40.0%
CCATCACAAAATCTTCAGAC+GGG - chr6.2:5621920-5621939 None:intergenic 40.0%
CGCATAGCAGAATGTAAACT+TGG - chr6.2:5619324-5619343 None:intergenic 40.0%
CTAAGGGAATTAACACCTGA+TGG - chr6.2:5619441-5619460 None:intergenic 40.0%
CTCACAAACCATTTACGAGA+GGG - chr6.2:5621600-5621619 None:intergenic 40.0%
GAAAGAAGATGAAGAGTTGG+CGG + chr6.2:5621704-5621723 MS.gene030989:CDS 40.0%
GACAAAAGCCAAGAAACTTC+TGG + chr6.2:5620386-5620405 MS.gene030989:CDS 40.0%
GATGAAAAGCTGTGAGGATT+TGG - chr6.2:5617987-5618006 None:intergenic 40.0%
GATGTATTCTGACAGTGTGT+TGG + chr6.2:5619962-5619981 MS.gene030989:intron 40.0%
GATTAGACCATGACTCACAA+TGG - chr6.2:5620804-5620823 None:intergenic 40.0%
GCAAAACATGACATAGAAGG+CGG - chr6.2:5622311-5622330 None:intergenic 40.0%
GCAAGCAAGTCAAAAATGGA+AGG - chr6.2:5621353-5621372 None:intergenic 40.0%
GCAGTCAAAGAAAACGAATG+CGG + chr6.2:5622567-5622586 MS.gene030989:CDS 40.0%
GCCATAATCAACAGCATGAT+GGG - chr6.2:5620207-5620226 None:intergenic 40.0%
GGAAACCATTACTTCTACCA+TGG - chr6.2:5620535-5620554 None:intergenic 40.0%
GGTGGAAAAAACTGGAATGA+CGG - chr6.2:5620962-5620981 None:intergenic 40.0%
GTAAGCCTTTGTTAGTTGAG+CGG + chr6.2:5620411-5620430 MS.gene030989:CDS 40.0%
GTAGACCATGGTAGAAGTAA+TGG + chr6.2:5620527-5620546 MS.gene030989:CDS 40.0%
GTATACCTTAATGCGCCTAA+TGG + chr6.2:5621825-5621844 MS.gene030989:CDS 40.0%
GTGTTGTCAAATTGCCACTA+TGG - chr6.2:5617829-5617848 None:intergenic 40.0%
GTTCGCAAGCAAGTCAAAAA+TGG - chr6.2:5621357-5621376 None:intergenic 40.0%
GTTTGATCCAGATACTCTGA+AGG + chr6.2:5621422-5621441 MS.gene030989:CDS 40.0%
TAAGTAAATTGTGACGCTGC+TGG - chr6.2:5620992-5621011 None:intergenic 40.0%
TAGCTGACAATTCTACTGGT+AGG + chr6.2:5620162-5620181 MS.gene030989:CDS 40.0%
TAGGCATATGCCCTCATATA+TGG + chr6.2:5620130-5620149 MS.gene030989:CDS 40.0%
TAGGCATCAATTAGTGCTCT+TGG - chr6.2:5620359-5620378 None:intergenic 40.0%
TATTGTGAAGAATGTTGGCC+AGG + chr6.2:5619155-5619174 MS.gene030989:CDS 40.0%
TCAATCTTCCGTAAGACAGA+AGG - chr6.2:5619381-5619400 None:intergenic 40.0%
TCGAATCTCCGCTATTTGTA+TGG + chr6.2:5619063-5619082 MS.gene030989:intron 40.0%
TCTGATGAGAAACCGATAGT+TGG - chr6.2:5620563-5620582 None:intergenic 40.0%
TCTGCAATCAGTGCCTTATA+CGG + chr6.2:5621456-5621475 MS.gene030989:CDS 40.0%
TCTTTGACTGCCTTCTTCAT+AGG - chr6.2:5622558-5622577 None:intergenic 40.0%
TGAAGAAGAGGAGTTCGATT+GGG + chr6.2:5620484-5620503 MS.gene030989:CDS 40.0%
TGACACTGAAGAAGTTGCAT+TGG - chr6.2:5620606-5620625 None:intergenic 40.0%
TGCAACTTCTTCAGTGTCAA+GGG + chr6.2:5620607-5620626 MS.gene030989:CDS 40.0%
TGTTTCCCTCTTTGTATGCA+GGG + chr6.2:5622530-5622549 MS.gene030989:intron 40.0%
TTACACGAAATTATGTGCCC+TGG - chr6.2:5617721-5617740 None:intergenic 40.0%
TTAGACTCAACAGGAACTGT+TGG + chr6.2:5620014-5620033 MS.gene030989:CDS 40.0%
TTAGGAATTCAGGACGATGA+TGG + chr6.2:5617781-5617800 MS.gene030989:intron 40.0%
TTCCATCGAAGAATCCTGTT+AGG + chr6.2:5620747-5620766 MS.gene030989:CDS 40.0%
TTCCGACTATCACCAGAAAA+CGG - chr6.2:5620281-5620300 None:intergenic 40.0%
TTCCTAACAGGATTCTTCGA+TGG - chr6.2:5620752-5620771 None:intergenic 40.0%
TTGTTTCCCTCTTTGTATGC+AGG + chr6.2:5622529-5622548 MS.gene030989:intron 40.0%
TTTGTTCAAATTCCGCTACC+CGG - chr6.2:5617438-5617457 None:intergenic 40.0%
! AACTCTTTTCATTTCCAGGG+GGG + chr6.2:5621112-5621131 MS.gene030989:CDS 40.0%
! AGAGCACTAATTGATGCCTA+TGG + chr6.2:5620359-5620378 MS.gene030989:CDS 40.0%
! CAACTCTTTTCATTTCCAGG+GGG + chr6.2:5621111-5621130 MS.gene030989:CDS 40.0%
! CGGCAGCCATATTATTCTTT+TGG + chr6.2:5622169-5622188 MS.gene030989:intron 40.0%
! GAAAATGATAGGTGGTGATG+AGG - chr6.2:5618492-5618511 None:intergenic 40.0%
! GATTCGAATGGATTCCTAAC+AGG - chr6.2:5620764-5620783 None:intergenic 40.0%
! GTTTTACAGTGATGAAACGG+AGG + chr6.2:5621782-5621801 MS.gene030989:CDS 40.0%
! TATGCTACAGTGCTGCTATA+GGG - chr6.2:5617518-5617537 None:intergenic 40.0%
! TTTCTTTTCCTCAGTGGTCT+CGG - chr6.2:5621688-5621707 None:intergenic 40.0%
!! AATGGTGGATTATAGAAGCC+AGG + chr6.2:5617700-5617719 MS.gene030989:intron 40.0%
!! ACCAATCTCTCCTCTGAAAT+GGG + chr6.2:5618824-5618843 MS.gene030989:intron 40.0%
!! ATGGTGGATTATAGAAGCCA+GGG + chr6.2:5617701-5617720 MS.gene030989:intron 40.0%
!! GGTACAAATGGACTAGGATT+GGG - chr6.2:5621196-5621215 None:intergenic 40.0%
!! TGGTACAAATGGACTAGGAT+TGG - chr6.2:5621197-5621216 None:intergenic 40.0%
!! TGGTTTGGTACAAATGGACT+AGG - chr6.2:5621202-5621221 None:intergenic 40.0%
!! TTGGCTTTTGTCACTACCAT+AGG - chr6.2:5620378-5620397 None:intergenic 40.0%
!! TTTTGGCAACTTGCTCAAGT+TGG + chr6.2:5617950-5617969 MS.gene030989:intron 40.0%
!!! ACATGTATTTTGGTCCTCGT+CGG - chr6.2:5621736-5621755 None:intergenic 40.0%
!!! AGATTTTGTGATGGACGAAG+GGG + chr6.2:5621926-5621945 MS.gene030989:CDS 40.0%
!!! ATTCCAGTTTTTTCCACCTC+AGG + chr6.2:5620964-5620983 MS.gene030989:CDS 40.0%
!!! GAAGATTTTGTGATGGACGA+AGG + chr6.2:5621924-5621943 MS.gene030989:CDS 40.0%
!!! TGGTAAAACGTGTTTTTGGG+GGG + chr6.2:5622132-5622151 MS.gene030989:intron 40.0%
AAACAGGTCGTACATTTGGC+AGG - chr6.2:5621057-5621076 None:intergenic 45.0%
AAACATGACATAGAAGGCGG+CGG - chr6.2:5622308-5622327 None:intergenic 45.0%
AAAGCTGCAGGCAAAACTGT+TGG - chr6.2:5620668-5620687 None:intergenic 45.0%
AACAGGTCGTACATTTGGCA+GGG - chr6.2:5621056-5621075 None:intergenic 45.0%
AACGTCGTGAAGAAGATCCT+CGG + chr6.2:5616874-5616893 MS.gene030989:CDS 45.0%
AACTCCGATGAAAAGCTGTG+AGG - chr6.2:5617993-5618012 None:intergenic 45.0%
AATCGACCAACGAGGATTGA+TGG - chr6.2:5616837-5616856 None:intergenic 45.0%
AATCTCCTCGACCAACTCAT+GGG + chr6.2:5619469-5619488 MS.gene030989:CDS 45.0%
ACCATGTTGTACTGCCATAG+TGG + chr6.2:5617812-5617831 MS.gene030989:intron 45.0%
ACGTGGAGCATGCACATTTA+CGG - chr6.2:5620705-5620724 None:intergenic 45.0%
ACTTATAGGCCATCTTTGCC+AGG + chr6.2:5621007-5621026 MS.gene030989:CDS 45.0%
AGAAACCGATAGTTGGTTGC+AGG - chr6.2:5620556-5620575 None:intergenic 45.0%
AGGAGATTCAGAAGCCCTAA+GGG - chr6.2:5619457-5619476 None:intergenic 45.0%
AGGTACCCTGCATACAAAGA+GGG - chr6.2:5622538-5622557 None:intergenic 45.0%
ATAGCAGCACTGTAGCATAG+CGG + chr6.2:5617519-5617538 MS.gene030989:intron 45.0%
ATCAGACCAGGAAGCTGATT+AGG - chr6.2:5620908-5620927 None:intergenic 45.0%
ATCTTCCGTAAGACAGAAGG+AGG - chr6.2:5619378-5619397 None:intergenic 45.0%
CAAGAGTTCTCTGTTGCTAG+AGG - chr6.2:5619929-5619948 None:intergenic 45.0%
CAATTTGTCCCAAGTAGGGT+TGG + chr6.2:5620074-5620093 MS.gene030989:CDS 45.0%
CTACAAGCAACCTAAAACCC+AGG - chr6.2:5618037-5618056 None:intergenic 45.0%
CTACCATGGTCTACTACTGT+CGG - chr6.2:5620521-5620540 None:intergenic 45.0%
CTGAAGAAGAGGAGTTCGAT+TGG + chr6.2:5620483-5620502 MS.gene030989:CDS 45.0%
CTGTCCAAGAGATAGAGTGA+AGG - chr6.2:5619135-5619154 None:intergenic 45.0%
GAAGATCTTCCAACCCTACT+TGG - chr6.2:5620086-5620105 None:intergenic 45.0%
GAATAACAACAGGCATGGAC+AGG + chr6.2:5621847-5621866 MS.gene030989:CDS 45.0%
GACGGTGTTTGTACACTGTT+TGG - chr6.2:5620944-5620963 None:intergenic 45.0%
GAGAAGAAGAGTTGAGTGAG+TGG + chr6.2:5620246-5620265 MS.gene030989:CDS 45.0%
GAGAGAACGCAAAACTGGTA+TGG - chr6.2:5618464-5618483 None:intergenic 45.0%
GATCCTGAGGTGGAAAAAAC+TGG - chr6.2:5620970-5620989 None:intergenic 45.0%
GCGCCTAATGGAATAACAAC+AGG + chr6.2:5621837-5621856 MS.gene030989:CDS 45.0%
GCTACCTTCACTCTATCTCT+TGG + chr6.2:5619128-5619147 MS.gene030989:CDS 45.0%
GCTCGTCTTGGGATTTGAAT+CGG - chr6.2:5621515-5621534 None:intergenic 45.0%
GCTGATTAGGTAGCTGATAC+AGG - chr6.2:5620895-5620914 None:intergenic 45.0%
GCTTACTGCCAGAAGTTTCT+TGG - chr6.2:5620397-5620416 None:intergenic 45.0%
GGCAAAACAGGTCGTACATT+TGG - chr6.2:5621061-5621080 None:intergenic 45.0%
GGCCATAATCAACAGCATGA+TGG - chr6.2:5620208-5620227 None:intergenic 45.0%
GGGTTAGATGAAATCAGACC+AGG - chr6.2:5620920-5620939 None:intergenic 45.0%
GGTGAAAGGTTAGACTCAAC+AGG + chr6.2:5620005-5620024 MS.gene030989:CDS 45.0%
GGTGTTTGTACACTGTTTGG+CGG - chr6.2:5620941-5620960 None:intergenic 45.0%
GGTTGTTCATGCACAGGAAA+AGG - chr6.2:5620833-5620852 None:intergenic 45.0%
GGTTTCCTGCAACCAACTAT+CGG + chr6.2:5620548-5620567 MS.gene030989:CDS 45.0%
GTGTTTGTACACTGTTTGGC+GGG - chr6.2:5620940-5620959 None:intergenic 45.0%
TAGGTACCCTGCATACAAAG+AGG - chr6.2:5622539-5622558 None:intergenic 45.0%
TCCCATTTCAGAGGAGAGAT+TGG - chr6.2:5618828-5618847 None:intergenic 45.0%
TCTGCTATGCGACATCTCTT+TGG + chr6.2:5619333-5619352 MS.gene030989:CDS 45.0%
TCTTCCCTCCTTCTGTCTTA+CGG + chr6.2:5619370-5619389 MS.gene030989:CDS 45.0%
TCTTCCGTAAGACAGAAGGA+GGG - chr6.2:5619377-5619396 None:intergenic 45.0%
TCTTCGTCACCACCAAGAAT+TGG + chr6.2:5620101-5620120 MS.gene030989:CDS 45.0%
TGCCTCATTTCAAAAGCTGC+AGG - chr6.2:5620680-5620699 None:intergenic 45.0%
TGTCTTACGGAAGATTGACG+TGG + chr6.2:5619383-5619402 MS.gene030989:CDS 45.0%
TGTTGTCAAATACCGGGTAG+CGG + chr6.2:5617423-5617442 MS.gene030989:intron 45.0%
! ATAATGGGGTTTACGGCCTA+TGG + chr6.2:5617743-5617762 MS.gene030989:intron 45.0%
! ATGCAGGGTACCTATGAAGA+AGG + chr6.2:5622545-5622564 MS.gene030989:intron 45.0%
! CACCAATCTCTCCTCTGAAA+TGG + chr6.2:5618823-5618842 MS.gene030989:intron 45.0%
! CCCCATCATGCTGTTGATTA+TGG + chr6.2:5620203-5620222 MS.gene030989:CDS 45.0%
! CCCGTCTGAAGATTTTGTGA+TGG + chr6.2:5621917-5621936 MS.gene030989:CDS 45.0%
! CTATGCTACAGTGCTGCTAT+AGG - chr6.2:5617519-5617538 None:intergenic 45.0%
! GTGAATGCTACCTGGGTTTT+AGG + chr6.2:5618024-5618043 MS.gene030989:intron 45.0%
! TGACGAACCTTCAGAGTATC+TGG - chr6.2:5621432-5621451 None:intergenic 45.0%
!! AATGGACTAGGATTGGGATG+AGG - chr6.2:5621190-5621209 None:intergenic 45.0%
!! AGCCGTTTTCTGGTGATAGT+CGG + chr6.2:5620276-5620295 MS.gene030989:CDS 45.0%
!! AGTGCTCTTGGATTTTGACG+TGG - chr6.2:5620347-5620366 None:intergenic 45.0%
!! CGGCCTATGGTGGATATAAT+AGG + chr6.2:5617756-5617775 MS.gene030989:intron 45.0%
!! GGCTGTTGGTTTGGTACAAA+TGG - chr6.2:5621208-5621227 None:intergenic 45.0%
!! TGTGTTGGTTTCATCCTCAC+AGG + chr6.2:5619977-5619996 MS.gene030989:intron 45.0%
!!! TGCCTGCAGCTTTTGAAATG+AGG + chr6.2:5620675-5620694 MS.gene030989:CDS 45.0%
ACAGGTCGTACATTTGGCAG+GGG - chr6.2:5621055-5621074 None:intergenic 50.0%
ACAGTGATGAAACGGAGGAG+TGG + chr6.2:5621787-5621806 MS.gene030989:CDS 50.0%
ACGGAGGAGTGGATGTATAG+AGG + chr6.2:5621798-5621817 MS.gene030989:CDS 50.0%
AGATGAAGAGTTGGCGGTTC+CGG + chr6.2:5621710-5621729 MS.gene030989:CDS 50.0%
AGCACAGCAGTCACATGGAT+TGG + chr6.2:5621532-5621551 MS.gene030989:CDS 50.0%
AGCAGAAGCCCTCTCGTAAA+TGG + chr6.2:5621589-5621608 MS.gene030989:CDS 50.0%
AGTCCGACAGTAGTAGACCA+TGG + chr6.2:5620515-5620534 MS.gene030989:CDS 50.0%
AGTGAGACGATGTGGCTTAG+TGG + chr6.2:5621618-5621637 MS.gene030989:CDS 50.0%
ATTGGGATGAGGTGGCATCT+GGG - chr6.2:5621179-5621198 None:intergenic 50.0%
CAGCTACCTAATCAGCTTCC+TGG + chr6.2:5620899-5620918 MS.gene030989:CDS 50.0%
CCAAACCAACAGCCAACTGT+TGG + chr6.2:5621214-5621233 MS.gene030989:CDS 50.0%
CCACAAGTTGTGCACTGTCT+AGG - chr6.2:5621489-5621508 None:intergenic 50.0%
CCTAGACAGTGCACAACTTG+TGG + chr6.2:5621486-5621505 MS.gene030989:CDS 50.0%
CGTCTTGGGATTTGAATCGG+AGG - chr6.2:5621512-5621531 None:intergenic 50.0%
CTGCAGGCAAAACTGTTGGA+CGG - chr6.2:5620664-5620683 None:intergenic 50.0%
CTTGGGAGAGAACGCAAAAC+TGG - chr6.2:5618469-5618488 None:intergenic 50.0%
GAATCTCCTCGACCAACTCA+TGG + chr6.2:5619468-5619487 MS.gene030989:CDS 50.0%
GACGTGGTTGTCCGTTACTA+AGG - chr6.2:5620331-5620350 None:intergenic 50.0%
GACTAATCAAGCCCCTTCAC+AGG + chr6.2:5621285-5621304 MS.gene030989:CDS 50.0%
GAGGAGATTCAGAAGCCCTA+AGG - chr6.2:5619458-5619477 None:intergenic 50.0%
GCCACTATGGCAGTACAACA+TGG - chr6.2:5617816-5617835 None:intergenic 50.0%
GCGGCTGGATAGAAATGGTA+TGG + chr6.2:5620430-5620449 MS.gene030989:CDS 50.0%
GGTTGCGAATTTCTCAACCG+AGG - chr6.2:5616894-5616913 None:intergenic 50.0%
GGTTTGTGAGTGAGACGATG+TGG + chr6.2:5621610-5621629 MS.gene030989:CDS 50.0%
GTATGCCACGCAGAAAACCT+AGG - chr6.2:5619289-5619308 None:intergenic 50.0%
GTCAACATTGGCGATCTCAG+AGG + chr6.2:5618612-5618631 MS.gene030989:intron 50.0%
GTCTCGGTTGGCAAAAAACC+TGG - chr6.2:5621672-5621691 None:intergenic 50.0%
GTTGAGCGGCTGGATAGAAA+TGG + chr6.2:5620425-5620444 MS.gene030989:CDS 50.0%
GTTTCATCCTCACAGGTTGC+AGG + chr6.2:5619984-5620003 MS.gene030989:intron 50.0%
TAACCTACTTCGGGTAGACG+CGG - chr6.2:5619201-5619220 None:intergenic 50.0%
TACGAGAGGGCTTCTGCTTA+CGG - chr6.2:5621587-5621606 None:intergenic 50.0%
TCCAGCCGCTCAACTAACAA+AGG - chr6.2:5620419-5620438 None:intergenic 50.0%
TGCGACATCTCTTTGGTACC+TGG + chr6.2:5619340-5619359 MS.gene030989:CDS 50.0%
TGCGTGTGTGAATGCTACCT+GGG + chr6.2:5618017-5618036 MS.gene030989:intron 50.0%
TTGTTCTCAACACCGTGCAG+CGG - chr6.2:5620854-5620873 None:intergenic 50.0%
! AGGAGGGAAGACTTTTGACC+AGG - chr6.2:5619361-5619380 None:intergenic 50.0%
! CCAACAGTTGGCTGTTGGTT+TGG - chr6.2:5621217-5621236 None:intergenic 50.0%
! GATAGGTGGTGATGAGGCTT+GGG - chr6.2:5618486-5618505 None:intergenic 50.0%
! GTGCTTTGAATCGACCAACG+AGG - chr6.2:5616845-5616864 None:intergenic 50.0%
! TGATAGGTGGTGATGAGGCT+TGG - chr6.2:5618487-5618506 None:intergenic 50.0%
! TTTTCCTCAGTGGTCTCGGT+TGG - chr6.2:5621684-5621703 None:intergenic 50.0%
!! CTTAGTGGTGCAGAGGCATT+GGG + chr6.2:5621633-5621652 MS.gene030989:CDS 50.0%
!! TCAGTGTCAAGGGTGTTTCC+TGG + chr6.2:5620617-5620636 MS.gene030989:CDS 50.0%
!! TGTATCCCATGAGTTGGTCG+AGG - chr6.2:5619477-5619496 None:intergenic 50.0%
AGACGAGCACAGCAGTCACA+TGG + chr6.2:5621527-5621546 MS.gene030989:CDS 55.0%
AGGCCATCTTTGCCAGGACA+TGG + chr6.2:5621013-5621032 MS.gene030989:CDS 55.0%
ATGGGGTTTACGGCCTATGG+TGG + chr6.2:5617746-5617765 MS.gene030989:intron 55.0%
CAGGTCGTACATTTGGCAGG+GGG - chr6.2:5621054-5621073 None:intergenic 55.0%
CCTCACAGGTTGCAGGTGAA+AGG + chr6.2:5619991-5620010 MS.gene030989:intron 55.0%
CCTCCACCATCAATCCTCGT+TGG + chr6.2:5616828-5616847 MS.gene030989:CDS 55.0%
CCTTTCACCTGCAACCTGTG+AGG - chr6.2:5619994-5620013 None:intergenic 55.0%
CGACCAACGAGGATTGATGG+TGG - chr6.2:5616834-5616853 None:intergenic 55.0%
CTCATAGCAGGACCATGTCC+TGG - chr6.2:5621028-5621047 None:intergenic 55.0%
GATGTGGCTTAGTGGTGCAG+AGG + chr6.2:5621626-5621645 MS.gene030989:CDS 55.0%
GATTGGGATGAGGTGGCATC+TGG - chr6.2:5621180-5621199 None:intergenic 55.0%
GCCTTTGTTAGTTGAGCGGC+TGG + chr6.2:5620415-5620434 MS.gene030989:CDS 55.0%
GGACCATGTCCTGGCAAAGA+TGG - chr6.2:5621019-5621038 None:intergenic 55.0%
GGACTAGGATTGGGATGAGG+TGG - chr6.2:5621187-5621206 None:intergenic 55.0%
GGCAAAGGGAGTGGCAAAAC+AGG - chr6.2:5621073-5621092 None:intergenic 55.0%
GGGGGGAGAGATCCAGAATT+CGG + chr6.2:5622149-5622168 MS.gene030989:intron 55.0%
GTGACTGCTGTGCTCGTCTT+GGG - chr6.2:5621526-5621545 None:intergenic 55.0%
GTGCATGAACAACCGCTGCA+CGG + chr6.2:5620839-5620858 MS.gene030989:CDS 55.0%
GTGCGTGTGTGAATGCTACC+TGG + chr6.2:5618016-5618035 MS.gene030989:intron 55.0%
TGCAGCGGTTGTTCATGCAC+AGG - chr6.2:5620839-5620858 None:intergenic 55.0%
TGTGACTGCTGTGCTCGTCT+TGG - chr6.2:5621527-5621546 None:intergenic 55.0%
TTGCGACCTTTACCTCCACC+TGG + chr6.2:5621139-5621158 MS.gene030989:CDS 55.0%
TTGGGAGCTGAATCAGCTCC+AGG + chr6.2:5621651-5621670 MS.gene030989:CDS 55.0%
TTTGCCAACCGAGACCACTG+AGG + chr6.2:5621677-5621696 MS.gene030989:CDS 55.0%
! GCATCTGGGATGGAGCATGT+GGG - chr6.2:5621165-5621184 None:intergenic 55.0%
! GCTTAGTGGTGCAGAGGCAT+TGG + chr6.2:5621632-5621651 MS.gene030989:CDS 55.0%
! GTCTGCCTAGGTTTTCTGCG+TGG + chr6.2:5619281-5619300 MS.gene030989:intron 55.0%
! GTTTTGCCACTCCCTTTGCC+AGG + chr6.2:5621073-5621092 MS.gene030989:CDS 55.0%
!! CCAACGAGGATTGATGGTGG+AGG - chr6.2:5616831-5616850 None:intergenic 55.0%
!! GCATTGGCTGCAACAGTAGC+AGG - chr6.2:5620590-5620609 None:intergenic 55.0%
!! TGGTCGCGAAAGCCGTTTTC+TGG + chr6.2:5620266-5620285 MS.gene030989:CDS 55.0%
!!! GTATTTTGGTCCTCGTCGGC+CGG - chr6.2:5621732-5621751 None:intergenic 55.0%
CTTTGGCCTGGCAAAGGGAG+TGG - chr6.2:5621082-5621101 None:intergenic 60.0%
GGAGTTATGCTGGGAGGACG+TGG - chr6.2:5620722-5620741 None:intergenic 60.0%
GGATGAGGTGGCATCTGGGA+TGG - chr6.2:5621175-5621194 None:intergenic 60.0%
GGCAGGGGGTTACTCATAGC+AGG - chr6.2:5621040-5621059 None:intergenic 60.0%
GGCATGGACAGGTCGCAGTT+AGG + chr6.2:5621858-5621877 MS.gene030989:CDS 60.0%
TCACCGCGTCTACCCGAAGT+AGG + chr6.2:5619195-5619214 MS.gene030989:intron 60.0%
TGTGACGCTGCTGGATCCTG+AGG - chr6.2:5620983-5621002 None:intergenic 60.0%
TGTGGGCCAGGTGGAGGTAA+AGG - chr6.2:5621148-5621167 None:intergenic 60.0%
! GGCATCTGGGATGGAGCATG+TGG - chr6.2:5621166-5621185 None:intergenic 60.0%
AAGGTCGCAAAGCTCCCCCC+TGG - chr6.2:5621129-5621148 None:intergenic 65.0%
GACGCTGCTGGATCCTGAGG+TGG - chr6.2:5620980-5620999 None:intergenic 65.0%
GATGGAGCATGTGGGCCAGG+TGG - chr6.2:5621157-5621176 None:intergenic 65.0%
TGGGATGGAGCATGTGGGCC+AGG - chr6.2:5621160-5621179 None:intergenic 65.0%
GGAGCATGTGGGCCAGGTGG+AGG - chr6.2:5621154-5621173 None:intergenic 70.0%
GTTGGCGGTTCCGGCCGACG+AGG + chr6.2:5621719-5621738 MS.gene030989:CDS 75.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 5616804 5622595 5616804 ID=MS.gene030989
chr6.2 mRNA 5616804 5622595 5616804 ID=MS.gene030989.t1;Parent=MS.gene030989
chr6.2 exon 5616804 5617067 5616804 ID=MS.gene030989.t1.exon1;Parent=MS.gene030989.t1
chr6.2 CDS 5616804 5617067 5616804 ID=cds.MS.gene030989.t1;Parent=MS.gene030989.t1
chr6.2 exon 5619111 5619212 5619111 ID=MS.gene030989.t1.exon2;Parent=MS.gene030989.t1
chr6.2 CDS 5619111 5619212 5619111 ID=cds.MS.gene030989.t1;Parent=MS.gene030989.t1
chr6.2 exon 5619291 5619551 5619291 ID=MS.gene030989.t1.exon3;Parent=MS.gene030989.t1
chr6.2 CDS 5619291 5619551 5619291 ID=cds.MS.gene030989.t1;Parent=MS.gene030989.t1
chr6.2 exon 5619999 5621306 5619999 ID=MS.gene030989.t1.exon4;Parent=MS.gene030989.t1
chr6.2 CDS 5619999 5621306 5619999 ID=cds.MS.gene030989.t1;Parent=MS.gene030989.t1
chr6.2 exon 5621405 5621947 5621405 ID=MS.gene030989.t1.exon5;Parent=MS.gene030989.t1
chr6.2 CDS 5621405 5621947 5621405 ID=cds.MS.gene030989.t1;Parent=MS.gene030989.t1
chr6.2 exon 5622551 5622595 5622551 ID=MS.gene030989.t1.exon6;Parent=MS.gene030989.t1
chr6.2 CDS 5622551 5622595 5622551 ID=cds.MS.gene030989.t1;Parent=MS.gene030989.t1
Gene Sequence

>MS.gene030989

ATGAGCAATGAGATTGTTCAAAAGCCTCCACCATCAATCCTCGTTGGTCGATTCAAAGCACTGTTGAATCAACGTCGTGAAGAAGATCCTCGGTTGAGAAATTCGCAACCTTCAACAGAAGAAATTGTTCAGATTTACGAGCTTTTGTTGTCTGAACTCACGTGTAATGTTAAACCTATCATCACTGATCTTACTATCATTGCTGAACAACATCGTAATCATGCTAAAGGAATCGCTTTTGCTATTTGCAACCGTATTGTTGAGGTTTTTGTTTTTTACACCCCCTTTTGTAAAATTCCACACCATTGTTCAGATTAAGAGTTATTATTGTTGTTTTCATTGTTGTGAATTCAATTTTTGTCTATTTTATTGTTCTATTTGTTTTTTACTTTATCAATTTAGTTTATTGCTATTCGATAGGAAAATTTTTCGATTTTTAGTTCATTTCATTTGATGGGTTTCACAGTTTTGGCGATTTTTTTTTTTAATTTAATTGATTAATAATTGTTTATTTGGGAATTGGAAATTGAAAGTAATGATTTTGATGTAATTGTGATTGTGTTAAACCAATTAGTAGCATCTGGGCAATTGAAATATAACTACAACTAATAATGAATGATGTTGTCAAATACCGGGTAGCGGAATTTGAACAAATTACTATCGTTTTGCGATTAGCTTTTTAGTTAAAGTGTTATCAAATAACAGCACTAACCCTATAGCAGCACTGTAGCATAGCGGAATATGAATAAACCACTATTTTCTGCGATTTGTGATTGATAACATTGTTAACAAATGGTAAAATTTAGAGATTCAAGTAAGTATACTTAACCATTAACACAATTGAGTACTTAAAAATCGATTTTTGGAACCAATGAAAGTGAAATAGTTAGTGTATCAATGGTGGATTATAGAAGCCAGGGCACATAATTTCGTGTAATAATAATGGGGTTTACGGCCTATGGTGGATATAATAGGAATTAGGAATTCAGGACGATGATGGCTTGCACAACCATGTTGTACTGCCATAGTGGCAATTTGACAACACTGAAAATACTATAATATCTGGAGTAATTTTTAAAGGATTTAGACAAACATTTCATCTGAAAAGGGAATTCGTTATTGTGATTTTGCTGAAATGATTAAGTATTTTGGCAACTTGCTCAAGTTGGAATACAGTATTCCAAATCCTCACAGCTTTTCATCGGAGTTTTTGTGCGTGTGTGAATGCTACCTGGGTTTTAGGTTGCTTGTAGTTGAAATAAACGAGAATGAACAAGGCTGCAATTGAATGCTAAACAATTTCCTGAATAAATTGAATGATTTTGAAACATTAGCGTATACTTGCTTGGAGTAAATATTAGGTTAAGTATATTAGTCTTGCATCACACATATTAGACTATTGATAATCCAGCTTACTTCATATATATTTCATGCCTATGTTAATATGTTATTTTGTAGCTATATTTTTGTTGTTATTGTTTAGACAAGCTGTTAACTAAGGTTGTGTATTTATAATAGCTTATGCTAGAAGATAATTGGGTTGTTGGTGTCATCTAACTGACAGTCAGCTCAATTTGATAGAATTCTATCTATCATATATCTTTATTCTCTGTATATTCATTTCATCACTTTTGCATTTCAGAATAACCTAATGTATCCATACCAGTTTTGCGTTCTCTCCCAAGCCTCATCACCACCTATCATTTTCTATAAATATCTATACTGCCAATTGTCGTTTCTTATACTACGTAACACACACTTTTAACATTTACATACAAAGTAACTAGTACATAGTTTGCTGTATCTTTGTCAACATTGGCGATCTCAGAGGCAGAATAATATAAAATTGTTTAATTATGATACTGATGCTTCTTCTTATTAAGTTTATATGGGCATAGTTTGCTCGTACCAATGAGAAATAAGTTTGATTCTTTGTTGGAAAAATCATACAGGGATTCTTACAGAAGTATTGGTTCTTAACCTAACCCCATATCAATTTTGATTTTAGAGATTAATTGTCACCAATCTCTCCTCTGAAATGGGAACTTTGTAAGAATTGGTTAAAGAATTCGGTAAATAACTGTGCAGTAAATCATTTTATCGTTGTCCAAAACACATAACTCATCATGCAAAATGTTGTCACTGACATGCCACTAAGTTTAGTGTGGAAACTGTAGAGTGATTCCTTTTTCTTTTCTATTTTTTCTTTTACTATCTAGTTAATAGTGTGTAGTATAAAATCAACGTCTCTATTATTATTCGAATCTCCGCTATTTGTATGGTCTCCAATTGTTTATTATTTTTCAGGTGTCTGCAGATCAAAAGCTACCTTCACTCTATCTCTTGGACAGTATTGTGAAGAATGTTGGCCAGGAATATGTTCGATACTTCTCACCGCGTCTACCCGAAGTAGGTTATTGTAATTTGATTGAATTCCTAAATGATTTAATTCTGTTATTGAAACTTATAGTTCTATTGTCTGCCTAGGTTTTCTGCGTGGCATACAGACAAGTTGATCCAAGTTTACATTCTGCTATGCGACATCTCTTTGGTACCTGGTCAAAAGTCTTCCCTCCTTCTGTCTTACGGAAGATTGACGTGGAATTGCAATTTTCTAAACCAGTTAATAATCAACCATCAGGTGTTAATTCCCTTAGGGCTTCTGAATCTCCTCGACCAACTCATGGGATACATGTTAACCCAAGATACGTAAGACAAATAGAACACTCTACTTCAGTTATTGATAGTGTAAGTTTTTTTTCCCTTTAAATCTGTACTCCTTGCAAAATACTTTGGATGGAACTGCATCTCATTTAGTTGCGGATTTAATAAGGATGTGTTTGGCATCAATAATTTACATATATTCAGAAAAAAAAAAAGAAAAAGAAACTGATTGCATGTAACCAGAACCCAATGTGATTTTTGTGGAAAATATCTTAATTTTGCGCAGATGCTCTGTATCTCAGATTTTTTTTTTCTAGAATCTTATGTCTTAAAATATTTTAATTTCTGTTGAGGCAGTGAGTCTTAGATGACATATTAGATACTTCTATTTCCTTGTATTCAGTAAGAACTTTTTTCTACGTGAAACTGGATTATGTTGTATCTGTTACTGTTAGTTCCCTCTAGCAACAGAGAACTCTTGCATACTACTATAAGATGTATTCTGACAGTGTGTTGGTTTCATCCTCACAGGTTGCAGGTGAAAGGTTAGACTCAACAGGAACTGTTGGAAATGCAAATTTCGGTCTTCTTGCTAGTAAGATTAATCAATTTGTCCCAAGTAGGGTTGGAAGATCTTCGTCACCACCAAGAATTGGAATTGATAGGCATATGCCCTCATATATGGATGACTATTTAGCTGACAATTCTACTGGTAGGACAGTTGAGAGAGAATCTCCCCATCATGCTGTTGATTATGGCCTAGTTAAAGGATTAGGTAGAGAAGAAGAGTTGAGTGAGTGGTCGCGAAAGCCGTTTTCTGGTGATAGTCGGAAGAGATTTCAAACTTCTATGACATATAGCCTTAGTAACGGACAACCACGTCAAAATCCAAGAGCACTAATTGATGCCTATGGTAGTGACAAAAGCCAAGAAACTTCTGGCAGTAAGCCTTTGTTAGTTGAGCGGCTGGATAGAAATGGTATGGATAAGGTTATGACAACATCATGGCAGAATACTGAAGAAGAGGAGTTCGATTGGGAAGATATGAGTCCGACAGTAGTAGACCATGGTAGAAGTAATGGTTTCCTGCAACCAACTATCGGTTTCTCATCAGAAAAGCCTGCTACTGTTGCAGCCAATGCAACTTCTTCAGTGTCAAGGGTGTTTCCTGGTCTCAATTCAAATATTGAGTACCGTCCAACAGTTTTGCCTGCAGCTTTTGAAATGAGGCATTCCGTAAATGTGCATGCTCCACGTCCTCCCAGCATAACTCCTATATTTCCATCGAAGAATCCTGTTAGGAATCCATTCGAATCAATAAATGCCAATAGTACCATTGTGAGTCATGGTCTAATCAATAGACCTTTTCCTGTGCATGAACAACCGCTGCACGGTGTTGAGAACAATGATATCAATAAAAGAAACCTGTATCAGCTACCTAATCAGCTTCCTGGTCTGATTTCATCTAACCCGCCAAACAGTGTACAAACACCGTCATTCCAGTTTTTTCCACCTCAGGATCCAGCAGCGTCACAATTTACTTATAGGCCATCTTTGCCAGGACATGGTCCTGCTATGAGTAACCCCCTGCCAAATGTACGACCTGTTTTGCCACTCCCTTTGCCAGGCCAAAGAATCGGAAACAACTCTTTTCATTTCCAGGGGGGAGCTTTGCGACCTTTACCTCCACCTGGCCCACATGCTCCATCCCAGATGCCACCTCATCCCAATCCTAGTCCATTTGTACCAAACCAACAGCCAACTGTTGGATATTCTAATTTGATTAATTCACTCATGGCCCAAGGTGTAATCTCATTGACTAATCAAGCCCCTTCACAGGTAACTAAATCTATCTTAAGTTTTTCTTTTAAATTCCCATTTTCCTTCCATTTTTGACTTGCTTGCGAACCAACTTTGTAATTATATTATGTTTGTAGGATTTTGTTGGCATTGAGTTTGATCCAGATACTCTGAAGGTTCGTCATGAATCTGCAATCAGTGCCTTATACGGTAATCTTCCTAGACAGTGCACAACTTGTGGCCTCCGATTCAAATCCCAAGACGAGCACAGCAGTCACATGGATTGGCATGTGACTAAGAACCGTATGTCTAAAAACCGTAAGCAGAAGCCCTCTCGTAAATGGTTTGTGAGTGAGACGATGTGGCTTAGTGGTGCAGAGGCATTGGGAGCTGAATCAGCTCCAGGTTTTTTGCCAACCGAGACCACTGAGGAAAAGAAAGAAGATGAAGAGTTGGCGGTTCCGGCCGACGAGGACCAAAATACATGTGCATTATGTGGAGAACCTTTTGAAGAGTTTTACAGTGATGAAACGGAGGAGTGGATGTATAGAGGAGCTGTATACCTTAATGCGCCTAATGGAATAACAACAGGCATGGACAGGTCGCAGTTAGGCCCCATTATTCATGCTAAATGCAGATCTGAATCAACCCCGTCTGAAGATTTTGTGATGGACGAAGGGGTATGCGTTTCTCATATTACTTTTCTATGCATTTGTCTTGTTTTTGTTATACTTTTAAGTCTTTAACTCATTGACCAGCATTGAACTAGATTTCTTCGTAACTATATGTTTTCGCTCAAGTCTTTAATTCATTGACCAGCATTGAACTATATTTCTTCGCAACTTTATGTTTTTACTTTCCCAATGGTAAAACGTGTTTTTGGGGGGAGAGATCCAGAATTCGGCAGCCATATTATTCTTTTGGTGACTTCTCTTCAAGCGAGAATCAATCCATTATATTGAAAATTGCACATTTTGGCTGAAATGCAAATGCAATGTCTTGTTTTTTTTTTTTTTTTTTCTTTTTCTTTTCTTTTTCCGCCGCCTTCTATGTCATGTTTTGCAAATGTGGATATCATGGTTCACAATATATTGCAACACTAGGCGTGGTAATTTATGCTTCAACAACACATCAATGTTAATAAAATTGCAATTATGTGTGCCTATTTAATCGCTGCTAACTTCGCACTTCGCATGATGTTATGATTTCTAGTGGACTTTTTCATGTGCTGATGTTTTTCAAGCAGCAAATATTTATTCTTTTGTTTCCCTCTTTGTATGCAGGGTACCTATGAAGAAGGCAGTCAAAGAAAACGAATGCGGAGCTGA
Protein sequence

>MS.gene030989.t1

MSNEIVQKPPPSILVGRFKALLNQRREEDPRLRNSQPSTEEIVQIYELLLSELTCNVKPIITDLTIIAEQHRNHAKGIAFAICNRIVEVSADQKLPSLYLLDSIVKNVGQEYVRYFSPRLPEVFCVAYRQVDPSLHSAMRHLFGTWSKVFPPSVLRKIDVELQFSKPVNNQPSGVNSLRASESPRPTHGIHVNPRYVRQIEHSTSVIDSVAGERLDSTGTVGNANFGLLASKINQFVPSRVGRSSSPPRIGIDRHMPSYMDDYLADNSTGRTVERESPHHAVDYGLVKGLGREEELSEWSRKPFSGDSRKRFQTSMTYSLSNGQPRQNPRALIDAYGSDKSQETSGSKPLLVERLDRNGMDKVMTTSWQNTEEEEFDWEDMSPTVVDHGRSNGFLQPTIGFSSEKPATVAANATSSVSRVFPGLNSNIEYRPTVLPAAFEMRHSVNVHAPRPPSITPIFPSKNPVRNPFESINANSTIVSHGLINRPFPVHEQPLHGVENNDINKRNLYQLPNQLPGLISSNPPNSVQTPSFQFFPPQDPAASQFTYRPSLPGHGPAMSNPLPNVRPVLPLPLPGQRIGNNSFHFQGGALRPLPPPGPHAPSQMPPHPNPSPFVPNQQPTVGYSNLINSLMAQGVISLTNQAPSQDFVGIEFDPDTLKVRHESAISALYGNLPRQCTTCGLRFKSQDEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSETMWLSGAEALGAESAPGFLPTETTEEKKEDEELAVPADEDQNTCALCGEPFEEFYSDETEEWMYRGAVYLNAPNGITTGMDRSQLGPIIHAKCRSESTPSEDFVMDEGGTYEEGSQRKRMRS