AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031017

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031017.t1 MTR_6g011860 97.194 392 10 1 1 392 1 391 0.0 789
MS.gene031017.t1 MTR_8g467490 50.493 406 176 12 1 392 1 395 1.71e-122 360
MS.gene031017.t1 MTR_5g040420 48.009 427 151 20 1 392 1 391 6.11e-110 328
MS.gene031017.t1 MTR_2g068880 56.842 190 70 5 1 179 3 191 3.41e-68 218
MS.gene031017.t1 MTR_5g090970 56.983 179 65 3 7 174 1 178 4.66e-67 215
MS.gene031017.t1 MTR_5g090970 56.425 179 65 3 7 174 1 177 2.99e-66 213
MS.gene031017.t1 MTR_2g068920 56.684 187 70 5 1 177 3 188 9.92e-66 211
MS.gene031017.t1 MTR_4g089135 51.323 189 70 5 15 185 15 199 2.09e-59 196
MS.gene031017.t1 MTR_2g080010 53.293 167 74 4 14 177 14 179 4.02e-59 196
MS.gene031017.t1 MTR_7g085220 54.706 170 63 5 14 175 7 170 9.18e-58 192
MS.gene031017.t1 MTR_4g134460 53.374 163 64 3 13 175 52 202 1.47e-57 194
MS.gene031017.t1 MTR_2157s0010 41.833 251 127 6 15 257 8 247 2.01e-56 186
MS.gene031017.t1 MTR_2g064090 54.321 162 64 4 15 175 6 158 3.62e-55 185
MS.gene031017.t1 MTR_2g093810 49.162 179 84 3 17 194 16 188 1.81e-54 183
MS.gene031017.t1 MTR_5g041940 49.714 175 81 4 14 188 2 169 4.27e-54 180
MS.gene031017.t1 MTR_5g012080 44.615 195 96 2 9 201 1 185 6.10e-54 182
MS.gene031017.t1 MTR_3g088110 49.162 179 76 4 15 187 7 176 1.39e-53 179
MS.gene031017.t1 MTR_8g094580 50.877 171 64 4 14 178 6 162 1.54e-53 179
MS.gene031017.t1 MTR_3g096920 51.205 166 72 3 14 179 6 162 1.28e-52 177
MS.gene031017.t1 MTR_4g081870 50.282 177 81 4 7 183 1 170 1.58e-52 176
MS.gene031017.t1 MTR_2g079990 52.147 163 67 3 15 177 16 167 2.51e-52 178
MS.gene031017.t1 MTR_6g477900 49.412 170 75 3 15 183 6 165 3.37e-52 174
MS.gene031017.t1 MTR_5g021710 46.286 175 80 4 17 189 10 172 4.19e-52 177
MS.gene031017.t1 MTR_7g100990 51.205 166 70 4 15 177 11 168 1.24e-51 176
MS.gene031017.t1 MTR_4g036030 47.619 168 74 4 9 174 1 156 1.60e-51 176
MS.gene031017.t1 MTR_3g064580 50.000 166 73 3 15 179 6 162 2.77e-51 182
MS.gene031017.t1 MTR_8g059170 52.147 163 69 3 15 177 14 167 6.12e-51 174
MS.gene031017.t1 MTR_8g076110 46.341 164 74 4 17 178 8 159 9.11e-51 173
MS.gene031017.t1 MTR_4g101680 45.198 177 81 4 9 183 1 163 1.44e-50 174
MS.gene031017.t1 MTR_5g076850 49.697 165 72 3 15 178 6 160 2.44e-50 179
MS.gene031017.t1 MTR_2g062730 45.029 171 81 3 17 185 12 171 3.26e-50 172
MS.gene031017.t1 MTR_4g108760 49.390 164 74 3 14 177 16 170 3.26e-50 173
MS.gene031017.t1 MTR_4g075980 48.087 183 77 6 16 195 16 183 4.85e-50 171
MS.gene031017.t1 MTR_2g079990 47.253 182 75 3 15 177 16 195 6.28e-50 172
MS.gene031017.t1 MTR_5g014300 49.102 167 66 4 15 174 6 160 3.72e-49 169
MS.gene031017.t1 MTR_3g096920 57.778 135 54 2 14 148 6 137 4.16e-49 169
MS.gene031017.t1 MTR_2g078700 51.807 166 67 4 15 177 23 178 4.57e-49 170
MS.gene031017.t1 MTR_4g035590 50.000 162 66 4 17 176 10 158 6.27e-49 169
MS.gene031017.t1 MTR_3g435150 47.594 187 84 5 15 201 16 188 8.13e-49 167
MS.gene031017.t1 MTR_8g024480 42.703 185 99 4 1 181 1 182 8.23e-49 171
MS.gene031017.t1 MTR_6g032770 47.514 181 81 6 1 176 1 172 4.00e-48 168
MS.gene031017.t1 MTR_6g012670 50.920 163 71 4 14 176 19 172 4.96e-48 166
MS.gene031017.t1 MTR_6g084430 42.254 213 102 5 13 217 3 202 1.35e-47 165
MS.gene031017.t1 MTR_7g085260 47.977 173 77 4 14 182 16 179 2.13e-47 166
MS.gene031017.t1 MTR_3g109340 48.023 177 77 4 3 177 10 173 9.34e-47 164
MS.gene031017.t1 MTR_1g096430 45.198 177 80 5 17 191 9 170 9.95e-47 163
MS.gene031017.t1 MTR_3g109340 47.753 178 77 4 3 177 10 174 1.28e-46 163
MS.gene031017.t1 MTR_3g096140 46.584 161 75 4 15 174 7 157 5.27e-46 159
MS.gene031017.t1 MTR_3g096140 46.584 161 75 4 15 174 7 157 2.73e-45 160
MS.gene031017.t1 MTR_4g098630 49.080 163 71 3 15 174 6 159 3.07e-45 159
MS.gene031017.t1 MTR_2g064470 49.697 165 71 5 15 179 11 163 3.35e-45 158
MS.gene031017.t1 MTR_1g097300 57.364 129 51 3 16 142 20 146 9.89e-45 162
MS.gene031017.t1 MTR_7g005280 46.067 178 80 4 1 177 1 163 1.08e-44 155
MS.gene031017.t1 MTR_3g070030 47.205 161 73 4 18 176 22 172 1.73e-44 157
MS.gene031017.t1 MTR_7g011130 47.879 165 78 5 18 176 22 184 2.39e-44 157
MS.gene031017.t1 MTR_7g011120 47.853 163 77 4 17 176 10 167 3.37e-44 155
MS.gene031017.t1 MTR_8g063550 45.122 164 79 5 12 174 3 156 3.72e-44 156
MS.gene031017.t1 MTR_5g069030 45.402 174 84 3 2 174 12 175 6.39e-44 161
MS.gene031017.t1 MTR_8g063550 44.242 165 81 4 11 174 2 156 9.31e-44 157
MS.gene031017.t1 MTR_8g063550 45.342 161 77 4 15 174 6 156 1.36e-43 157
MS.gene031017.t1 MTR_1g090720 47.239 163 81 3 15 176 42 200 4.61e-43 157
MS.gene031017.t1 MTR_1g008740 43.333 180 85 5 2 175 10 178 4.81e-43 154
MS.gene031017.t1 MTR_3g116070 46.821 173 73 5 15 185 23 178 4.85e-43 154
MS.gene031017.t1 MTR_1g008740 44.828 174 81 5 6 175 2 164 8.81e-43 153
MS.gene031017.t1 MTR_8g099750 44.785 163 82 3 10 171 9 164 1.14e-41 146
MS.gene031017.t1 MTR_8g093580 43.478 161 80 4 15 174 6 156 1.21e-41 153
MS.gene031017.t1 MTR_1g069805 36.975 238 130 7 15 251 10 228 2.00e-41 147
MS.gene031017.t1 MTR_3g093050 43.275 171 86 3 7 176 14 174 5.57e-41 152
MS.gene031017.t1 MTR_3g093050 43.275 171 86 3 7 176 14 174 8.09e-41 152
MS.gene031017.t1 MTR_3g093040 42.593 162 78 5 18 176 111 260 3.53e-39 142
MS.gene031017.t1 MTR_7g097090 43.396 159 75 4 15 172 10 154 1.20e-38 140
MS.gene031017.t1 MTR_2g086880 40.000 175 87 5 1 175 5 161 1.29e-38 145
MS.gene031017.t1 MTR_1g090723 40.782 179 92 6 17 192 10 177 1.65e-38 146
MS.gene031017.t1 MTR_2g086880 42.236 161 76 4 15 175 18 161 1.73e-38 145
MS.gene031017.t1 MTR_4g052620 39.691 194 103 5 13 201 3 187 1.83e-38 139
MS.gene031017.t1 MTR_1g090723 40.223 179 92 6 17 192 10 176 8.41e-38 144
MS.gene031017.t1 MTR_1g090723 40.223 179 92 6 17 192 10 176 1.24e-37 143
MS.gene031017.t1 MTR_2g086690 34.483 232 133 8 12 231 1 225 1.30e-37 136
MS.gene031017.t1 MTR_3g098810 41.573 178 95 4 3 177 2 173 2.00e-37 135
MS.gene031017.t1 MTR_0036s0150 42.945 163 80 5 17 177 7 158 6.89e-37 140
MS.gene031017.t1 MTR_7g105170 37.791 172 98 4 12 178 1 168 1.25e-35 131
MS.gene031017.t1 MTR_3g098810 46.154 143 71 2 3 142 2 141 1.57e-35 129
MS.gene031017.t1 MTR_3g096140 43.448 145 71 4 31 174 2 136 2.07e-35 133
MS.gene031017.t1 MTR_8g023840 48.905 137 66 4 14 147 10 145 8.97e-35 132
MS.gene031017.t1 MTR_8g094580 48.760 121 43 3 64 178 1 108 1.01e-32 123
MS.gene031017.t1 MTR_3g070040 40.373 161 80 4 19 176 12 159 3.02e-32 124
MS.gene031017.t1 MTR_8g023860 46.617 133 67 4 12 141 9 140 2.22e-31 124
MS.gene031017.t1 MTR_8g023900 36.905 168 89 6 12 175 8 162 2.12e-28 116
MS.gene031017.t1 MTR_8g023900 38.750 160 80 5 18 174 196 340 9.21e-28 114
MS.gene031017.t1 MTR_8g023930 37.952 166 84 6 14 175 22 172 1.28e-27 114
MS.gene031017.t1 MTR_4g094302 36.646 161 89 5 15 174 11 159 5.40e-24 98.6
MS.gene031017.t1 MTR_4g094302 39.535 129 68 3 15 142 11 130 1.25e-22 93.6
MS.gene031017.t1 MTR_8g023880 34.031 191 84 10 16 187 7 174 1.37e-19 88.2
MS.gene031017.t1 MTR_8g093790 34.132 167 75 8 15 179 10 143 7.37e-19 84.0
MS.gene031017.t1 MTR_7g083330 34.109 129 81 3 18 145 21 146 2.17e-18 83.2
MS.gene031017.t1 MTR_7g070140 43.678 87 46 2 69 154 17 101 5.43e-18 80.1
MS.gene031017.t1 MTR_7g083370 34.615 130 77 4 14 140 9 133 1.88e-17 79.0
MS.gene031017.t1 MTR_7g083360 33.333 135 86 3 14 147 9 140 2.68e-17 79.0
MS.gene031017.t1 MTR_3g096400 31.056 161 102 4 15 173 7 160 5.35e-17 79.3
MS.gene031017.t1 MTR_1g087190 63.043 46 16 1 17 61 7 52 2.46e-13 64.7
MS.gene031017.t1 MTR_7g070150 42.424 66 26 2 112 177 7 60 6.69e-11 58.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031017.t1 AT1G26870 58.824 272 104 6 1 267 1 269 8.09e-97 295
MS.gene031017.t1 AT5G39820 64.706 204 56 6 1 190 5 206 1.28e-90 276
MS.gene031017.t1 AT2G43000 61.728 162 52 3 16 177 19 170 8.23e-71 224
MS.gene031017.t1 AT3G15510 49.246 199 91 6 19 210 21 216 1.21e-58 195
MS.gene031017.t1 AT3G12910 56.805 169 64 4 16 177 22 188 1.41e-58 193
MS.gene031017.t1 AT2G02450 53.750 160 62 3 15 174 51 198 5.09e-58 194
MS.gene031017.t1 AT2G02450 53.750 160 62 3 15 174 51 198 5.85e-58 194
MS.gene031017.t1 AT1G61110 53.614 166 73 3 15 177 16 180 1.60e-57 191
MS.gene031017.t1 AT3G04070 54.237 177 71 5 15 185 10 182 2.11e-57 191
MS.gene031017.t1 AT3G04070 49.223 193 72 5 15 185 10 198 1.02e-54 184
MS.gene031017.t1 AT4G27410 53.988 163 64 3 15 177 14 165 1.27e-54 182
MS.gene031017.t1 AT1G69490 49.714 175 81 4 7 181 1 168 7.68e-54 179
MS.gene031017.t1 AT3G17730 51.479 169 71 3 15 182 6 164 1.05e-53 178
MS.gene031017.t1 AT5G08790 51.515 165 73 3 14 178 6 163 4.41e-53 178
MS.gene031017.t1 AT5G17260 52.795 161 66 4 15 174 6 157 5.66e-53 183
MS.gene031017.t1 AT1G01720 52.071 169 73 4 9 177 1 161 7.82e-53 177
MS.gene031017.t1 AT3G15500 52.326 172 71 3 6 177 5 165 8.06e-53 178
MS.gene031017.t1 AT1G52890 51.705 176 69 4 7 177 1 165 1.71e-52 177
MS.gene031017.t1 AT3G03200 52.174 161 67 4 15 174 6 157 1.74e-52 182
MS.gene031017.t1 AT1G65910 51.875 160 66 3 17 175 8 157 4.03e-52 184
MS.gene031017.t1 AT5G63790 50.909 165 74 3 14 178 49 206 6.42e-52 176
MS.gene031017.t1 AT5G63790 50.909 165 74 3 14 178 59 216 7.29e-52 176
MS.gene031017.t1 AT4G27410 49.162 179 65 3 15 177 14 182 8.46e-52 176
MS.gene031017.t1 AT2G17040 49.133 173 71 4 13 183 4 161 9.93e-52 174
MS.gene031017.t1 AT4G36160 40.359 223 114 6 17 232 12 222 1.01e-51 177
MS.gene031017.t1 AT4G36160 40.359 223 114 6 17 232 12 222 1.01e-51 177
MS.gene031017.t1 AT4G36160 40.359 223 114 6 17 232 16 226 1.20e-51 177
MS.gene031017.t1 AT5G61430 50.617 162 71 3 14 175 15 167 1.34e-51 176
MS.gene031017.t1 AT2G18060 48.750 160 68 4 17 174 11 158 1.69e-51 176
MS.gene031017.t1 AT2G18060 48.750 160 68 4 17 174 11 158 1.69e-51 176
MS.gene031017.t1 AT1G12260 48.521 169 71 5 9 174 1 156 2.76e-51 175
MS.gene031017.t1 AT1G12260 48.521 169 71 5 9 174 1 156 3.60e-51 176
MS.gene031017.t1 AT3G04060 50.000 164 74 2 11 174 16 171 3.65e-51 175
MS.gene031017.t1 AT4G10350 48.837 172 76 3 17 186 11 172 4.29e-51 174
MS.gene031017.t1 AT1G77450 50.617 162 71 3 17 178 12 164 5.66e-51 171
MS.gene031017.t1 AT5G62380 49.689 161 65 5 17 174 9 156 6.60e-51 174
MS.gene031017.t1 AT5G62380 49.689 161 65 5 17 174 9 156 6.60e-51 174
MS.gene031017.t1 AT5G18270 48.521 169 79 2 14 182 20 180 8.77e-51 174
MS.gene031017.t1 AT5G07680 50.000 162 72 3 14 175 2 154 2.30e-50 172
MS.gene031017.t1 AT5G07680 50.000 162 72 3 14 175 16 168 2.82e-50 172
MS.gene031017.t1 AT4G17980 51.235 162 70 3 15 174 6 160 2.92e-50 170
MS.gene031017.t1 AT1G76420 48.187 193 80 6 2 193 15 188 3.11e-50 172
MS.gene031017.t1 AT4G17980 51.235 162 70 3 15 174 6 160 3.59e-50 171
MS.gene031017.t1 AT5G39610 43.541 209 103 5 14 219 19 215 3.67e-50 171
MS.gene031017.t1 AT5G18270 47.929 169 80 2 14 182 20 180 3.85e-50 172
MS.gene031017.t1 AT5G66300 45.402 174 82 4 17 188 14 176 7.70e-50 170
MS.gene031017.t1 AT3G18400 49.102 167 69 4 13 177 3 155 1.66e-49 169
MS.gene031017.t1 AT1G52880 52.381 168 67 4 19 179 21 182 2.08e-49 169
MS.gene031017.t1 AT1G62700 47.929 169 72 5 9 174 1 156 5.74e-49 171
MS.gene031017.t1 AT1G62700 47.929 169 72 5 9 174 1 156 5.74e-49 171
MS.gene031017.t1 AT1G33280 51.235 162 64 4 17 176 10 158 1.09e-48 167
MS.gene031017.t1 AT1G54330 51.553 161 64 4 15 174 6 153 1.84e-48 166
MS.gene031017.t1 AT1G56010 49.714 175 78 6 2 174 5 171 1.85e-48 167
MS.gene031017.t1 AT3G15170 45.498 211 100 6 13 219 17 216 9.32e-48 165
MS.gene031017.t1 AT2G46770 40.609 197 100 5 1 188 2 190 9.50e-48 166
MS.gene031017.t1 AT2G24430 47.590 166 75 3 13 177 14 168 1.88e-47 164
MS.gene031017.t1 AT2G24430 47.590 166 75 3 13 177 14 168 1.88e-47 164
MS.gene031017.t1 AT1G32770 43.750 176 95 3 4 176 5 179 6.05e-47 164
MS.gene031017.t1 AT1G71930 36.000 275 129 10 12 278 1 236 9.37e-47 162
MS.gene031017.t1 AT1G71930 36.000 275 129 10 12 278 1 236 9.37e-47 162
MS.gene031017.t1 AT5G46590 48.447 161 74 3 15 174 6 158 9.48e-47 162
MS.gene031017.t1 AT5G46590 53.676 136 61 2 15 149 6 140 1.23e-46 161
MS.gene031017.t1 AT5G53950 52.439 164 65 4 15 175 17 170 1.61e-46 163
MS.gene031017.t1 AT3G10500 47.674 172 79 3 7 177 1 162 2.10e-46 167
MS.gene031017.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.13e-46 162
MS.gene031017.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.13e-46 162
MS.gene031017.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.13e-46 162
MS.gene031017.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.13e-46 162
MS.gene031017.t1 AT1G79580 45.732 164 75 3 17 178 19 170 3.13e-46 162
MS.gene031017.t1 AT3G12977 40.969 227 118 7 3 224 5 220 5.27e-46 159
MS.gene031017.t1 AT3G29035 54.745 137 60 2 6 142 15 149 8.80e-46 160
MS.gene031017.t1 AT3G10490 46.626 163 77 3 15 176 27 180 1.73e-45 157
MS.gene031017.t1 AT5G13180 47.929 169 73 3 10 177 9 163 1.73e-45 157
MS.gene031017.t1 AT3G10480 47.239 163 75 3 15 176 27 179 1.87e-45 162
MS.gene031017.t1 AT5G04410 43.316 187 95 4 7 192 1 177 3.79e-45 164
MS.gene031017.t1 AT1G32510 39.474 228 108 8 15 235 6 210 6.37e-45 157
MS.gene031017.t1 AT3G10480 46.951 164 75 4 15 176 27 180 9.98e-45 160
MS.gene031017.t1 AT3G61910 40.556 180 92 4 7 176 3 177 1.36e-44 157
MS.gene031017.t1 AT3G10490 46.626 163 77 3 15 176 27 180 6.68e-44 158
MS.gene031017.t1 AT1G34190 47.239 163 73 5 17 177 18 169 1.24e-43 159
MS.gene031017.t1 AT5G24590 44.253 174 87 2 4 176 2 166 1.46e-43 157
MS.gene031017.t1 AT2G33480 44.633 177 84 4 1 177 1 163 1.12e-42 150
MS.gene031017.t1 AT2G27300 40.909 176 86 4 1 176 1 158 2.72e-42 151
MS.gene031017.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.98e-42 154
MS.gene031017.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.98e-42 154
MS.gene031017.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.98e-42 154
MS.gene031017.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.98e-42 154
MS.gene031017.t1 AT5G09330 44.242 165 73 4 15 174 6 156 2.98e-42 154
MS.gene031017.t1 AT1G34180 54.331 127 56 2 17 142 18 143 8.27e-42 152
MS.gene031017.t1 AT4G35580 45.882 170 79 5 7 174 1 159 1.17e-41 154
MS.gene031017.t1 AT4G35580 45.882 170 79 5 7 174 1 159 1.18e-41 154
MS.gene031017.t1 AT4G35580 45.882 170 79 5 7 174 1 159 1.42e-41 153
MS.gene031017.t1 AT3G49530 38.835 206 106 5 7 202 5 200 1.63e-41 151
MS.gene031017.t1 AT1G33060 43.103 174 88 3 2 174 11 174 2.57e-41 154
MS.gene031017.t1 AT1G33060 43.103 174 88 3 2 174 11 174 2.58e-41 154
MS.gene031017.t1 AT1G34180 54.331 127 56 2 17 142 18 143 2.77e-41 153
MS.gene031017.t1 AT3G49530 43.195 169 86 3 7 174 5 164 4.19e-41 151
MS.gene031017.t1 AT2G33480 44.633 177 82 5 1 177 1 161 4.59e-41 146
MS.gene031017.t1 AT3G10480 39.594 197 74 4 15 176 27 213 6.05e-41 152
MS.gene031017.t1 AT5G64060 42.593 162 82 4 14 174 5 156 4.56e-40 146
MS.gene031017.t1 AT1G34180 49.640 139 56 2 17 142 18 155 4.67e-40 148
MS.gene031017.t1 AT1G34180 49.640 139 56 2 17 142 18 155 1.62e-39 148
MS.gene031017.t1 AT4G28530 42.623 183 74 6 15 180 10 178 3.58e-39 143
MS.gene031017.t1 AT5G22290 40.764 157 77 3 15 171 21 161 1.05e-38 142
MS.gene031017.t1 AT3G44290 39.394 165 83 2 12 176 11 158 6.63e-38 137
MS.gene031017.t1 AT3G44290 39.634 164 82 2 12 175 11 157 2.52e-37 138
MS.gene031017.t1 AT5G04395 42.236 161 77 5 15 160 28 187 1.07e-34 127
MS.gene031017.t1 AT1G32870 43.503 177 89 5 15 190 10 176 4.28e-34 132
MS.gene031017.t1 AT1G32870 43.503 177 89 5 15 190 10 176 4.83e-34 132
MS.gene031017.t1 AT1G32870 42.105 190 98 6 3 190 33 212 5.58e-34 133
MS.gene031017.t1 AT2G43000 58.000 100 33 2 78 177 2 92 3.48e-33 123
MS.gene031017.t1 AT5G61430 50.000 112 48 2 64 175 1 104 7.37e-33 124
MS.gene031017.t1 AT3G12977 40.000 165 87 3 63 224 12 167 8.62e-32 120
MS.gene031017.t1 AT1G56010 51.351 111 47 3 64 174 1 104 2.19e-31 120
MS.gene031017.t1 AT3G44350 34.911 169 98 3 13 177 3 163 1.30e-30 117
MS.gene031017.t1 AT4G10350 46.774 124 56 2 63 186 12 125 1.43e-30 119
MS.gene031017.t1 AT5G22380 36.416 173 94 6 12 177 2 165 2.99e-30 116
MS.gene031017.t1 AT3G44350 36.552 145 88 2 13 153 3 147 5.04e-29 111
MS.gene031017.t1 AT4G01550 43.478 138 73 4 12 145 2 138 7.02e-28 114
MS.gene031017.t1 AT5G64530 39.645 169 83 6 15 177 3 158 3.12e-26 104
MS.gene031017.t1 AT5G64530 42.748 131 61 4 14 143 2 119 7.72e-26 102
MS.gene031017.t1 AT4G01520 42.537 134 70 5 18 145 7 139 9.12e-26 106
MS.gene031017.t1 AT4G01540 42.537 134 70 5 18 145 7 139 5.04e-25 106
MS.gene031017.t1 AT4G01540 42.537 134 70 5 18 145 7 139 6.37e-25 105
MS.gene031017.t1 AT4G01540 42.537 134 70 5 18 145 7 139 8.03e-25 105
MS.gene031017.t1 AT4G01540 42.537 134 70 5 18 145 7 139 8.19e-25 105
MS.gene031017.t1 AT4G28530 45.370 108 42 3 15 106 10 116 7.54e-21 92.8
MS.gene031017.t1 AT1G02230 39.850 133 72 4 18 145 6 135 8.97e-21 93.2
MS.gene031017.t1 AT2G33480 42.202 109 53 3 69 177 8 106 9.22e-21 90.1
MS.gene031017.t1 AT2G18060 51.852 81 27 3 94 174 2 70 1.42e-20 91.3
MS.gene031017.t1 AT1G02250 40.310 129 69 5 18 141 6 131 2.35e-20 92.0
MS.gene031017.t1 AT3G04420 38.095 126 74 3 18 140 6 130 6.34e-20 89.7
MS.gene031017.t1 AT1G01010 29.630 270 156 9 18 273 6 255 7.53e-20 91.3
MS.gene031017.t1 AT3G04420 38.095 126 74 3 18 140 6 130 2.33e-19 89.0
MS.gene031017.t1 AT3G04430 37.879 132 70 3 21 141 6 136 1.93e-18 83.2
MS.gene031017.t1 AT3G55210 30.220 182 94 6 15 180 11 175 1.90e-17 82.4
MS.gene031017.t1 AT5G14000 31.126 151 98 3 1 149 1 147 7.34e-17 77.8
MS.gene031017.t1 AT5G14000 27.568 185 116 4 1 183 1 169 1.55e-16 78.2
MS.gene031017.t1 AT1G02220 38.095 126 71 4 18 140 6 127 2.16e-16 80.5
MS.gene031017.t1 AT3G56530 32.353 136 89 2 17 150 54 188 7.17e-16 78.2
MS.gene031017.t1 AT3G10490 40.909 88 43 2 89 176 2 80 7.66e-15 75.5
MS.gene031017.t1 AT3G10490 40.909 88 43 2 89 176 2 80 7.66e-15 75.5
MS.gene031017.t1 AT5G50820 32.331 133 74 5 15 142 17 138 1.52e-13 69.3
MS.gene031017.t1 AT5G22290 40.260 77 30 3 95 171 2 62 1.00e-11 65.1

Find 76 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACCATGCTTCCTGGTAAT+TGG 0.131450 6.2:+6108138 None:intergenic
AACAGGAATTTGTGAGGATT+TGG 0.247261 6.2:+6107438 None:intergenic
CTTTCCAACCCTAACTATAT+TGG 0.251630 6.2:-6107328 MS.gene031017:CDS
GAGTTACAAGAGCTGGATTT+TGG 0.268455 6.2:-6108966 MS.gene031017:CDS
GAAGTCACTTGTCTTCTATA+AGG 0.296503 6.2:-6108884 MS.gene031017:CDS
TCTTCAAAACCAATATAGTT+AGG 0.296698 6.2:+6107319 None:intergenic
CCAGCTCTTGTAACTCTATT+AGG 0.312453 6.2:+6108973 None:intergenic
TTGTTGATAGGTTTGTAATT+TGG 0.312973 6.2:+6107475 None:intergenic
TTTCCATCTGATGAATATAT+AGG 0.335700 6.2:+6108922 None:intergenic
TCCTGGTAATTGGGAGATCC+AGG 0.349134 6.2:+6108148 None:intergenic
CCTCAAGTGTGTAGAACATT+AGG 0.351670 6.2:+6107392 None:intergenic
TGAGAAATTGTTGTTGGTAT+TGG 0.357693 6.2:+6107510 None:intergenic
GATGCAAATAATCAATATAA+TGG 0.359002 6.2:-6107298 MS.gene031017:CDS
TCACAAATTCCTGTTCCTAA+TGG 0.378078 6.2:-6107430 MS.gene031017:CDS
AACCATGCTTCCTGGTAATT+GGG 0.382863 6.2:+6108139 None:intergenic
ACTTGCTTAATAAGTTCAAT+AGG 0.383211 6.2:+6109628 None:intergenic
CCCACAGATGAAGAGCTTGT+TGG 0.384548 6.2:-6109688 MS.gene031017:CDS
ATCATCAATTGTGCACTTTG+TGG 0.389954 6.2:+6107360 None:intergenic
TTGTACCATGGAAAGGGAAT+TGG 0.393283 6.2:+6108187 None:intergenic
ATTGGATGATGCATGAGTTT+AGG 0.393794 6.2:-6108834 MS.gene031017:CDS
AATTCATTAACCATGCTTCC+TGG 0.399214 6.2:+6108131 None:intergenic
CTTAATCAATGGGAAAATCT+TGG 0.415172 6.2:-6107211 MS.gene031017:CDS
TCTTGAATATTCACAATGTT+TGG 0.417304 6.2:+6107244 None:intergenic
GTCCTCAAAGCATCAAAACT+TGG 0.429523 6.2:+6107157 None:intergenic
GGAAGGCAACTGGAACTGAT+AGG 0.433013 6.2:-6108945 MS.gene031017:CDS
CTTTGAGGACTAGTGTTACA+TGG 0.434518 6.2:-6107144 MS.gene031017:CDS
ATCAAATGCAGCTTAATCAA+TGG 0.439366 6.2:-6107222 MS.gene031017:CDS
ATTGTGTTGATGTTGTTGAT+AGG 0.466813 6.2:+6107463 None:intergenic
AAGTCACTTGTCTTCTATAA+GGG 0.469878 6.2:-6108883 MS.gene031017:CDS
AAGGTTGATGATTTGATGCC+TGG 0.470160 6.2:-6109724 MS.gene031017:CDS
CTTCAAAACCAATATAGTTA+GGG 0.471781 6.2:+6107320 None:intergenic
TCAAATGCAGCTTAATCAAT+GGG 0.472008 6.2:-6107221 MS.gene031017:CDS
CCTAATAGAGTTACAAGAGC+TGG 0.479097 6.2:-6108973 MS.gene031017:CDS
ATAATGTCTCCATTAGGAAC+AGG 0.480950 6.2:+6107421 None:intergenic
TTATCAATAATGTCTCCATT+AGG 0.481250 6.2:+6107415 None:intergenic
AAACTTGGAGACAAATTGAA+TGG 0.481553 6.2:+6107172 None:intergenic
TATAAGAATTCTTACTTGGA+AGG 0.484332 6.2:+6109578 None:intergenic
TTCTTACTTGGAAGGTCCCA+TGG 0.492827 6.2:+6109586 None:intergenic
TGAAGCTGAGAAATTGTTGT+TGG 0.496415 6.2:+6107504 None:intergenic
CCAAAGGGATGAAAACTGAT+TGG 0.497200 6.2:-6108852 MS.gene031017:CDS
TCATCAGATGGAAAATGCAT+TGG 0.498527 6.2:-6108913 MS.gene031017:CDS
AAAACCAATATAGTTAGGGT+TGG 0.499469 6.2:+6107324 None:intergenic
TTTACTAGTGACATAGGTTG+TGG 0.499478 6.2:+6107093 None:intergenic
CCCTGGATCTCCCAATTACC+AGG 0.507212 6.2:-6108149 MS.gene031017:CDS
GTAACATTTACTAGTGACAT+AGG 0.511602 6.2:+6107087 None:intergenic
ACCAACAAGCTCTTCATCTG+TGG 0.517278 6.2:+6109687 None:intergenic
TATTGAACTTATTAAGCAAG+TGG 0.518925 6.2:-6109626 MS.gene031017:CDS
GAAAACCAATTCCCTTTCCA+TGG 0.519977 6.2:-6108192 MS.gene031017:CDS
TGTGCACTTTGTGGAACCAT+TGG 0.528605 6.2:+6107369 None:intergenic
AGGATTCATGGGCAATCTGT+AGG 0.535758 6.2:-6108223 MS.gene031017:CDS
TCATGTACAACAACAGATCA+AGG 0.539727 6.2:-6108059 MS.gene031017:CDS
CCTGGTAATTGGGAGATCCA+GGG 0.543622 6.2:+6108149 None:intergenic
GTGGGATGAAAACGAAAGCC+AGG 0.544940 6.2:+6109706 None:intergenic
AATGGTATTTCTATTGTCCA+AGG 0.545816 6.2:-6109023 MS.gene031017:CDS
ATGTTTGGTTGCATATCTTG+AGG 0.549489 6.2:+6107259 None:intergenic
ATATTTACAAACATGATCCA+TGG 0.555585 6.2:-6109603 MS.gene031017:CDS
AGGCCTATATATTCATCAGA+TGG 0.558926 6.2:-6108925 MS.gene031017:CDS
CATGGAGGAAAGAACTGAGA+TGG 0.565541 6.2:-6109755 MS.gene031017:CDS
TTCTACACACTTGAGGCCAA+TGG 0.570350 6.2:-6107385 MS.gene031017:CDS
CTCCCAATTACCAGGAAGCA+TGG 0.571720 6.2:-6108141 MS.gene031017:CDS
TATTTACAAACATGATCCAT+GGG 0.576790 6.2:-6109602 MS.gene031017:CDS
CAAGAAGAGCTAGCAAGTAG+TGG 0.581972 6.2:-6109054 MS.gene031017:intron
CCAACAAGCTCTTCATCTGT+GGG 0.588377 6.2:+6109688 None:intergenic
ACAGATCAAGGATCATCAGC+AGG 0.588648 6.2:-6108047 MS.gene031017:CDS
GTGGACATTTCACTAGTGCA+AGG 0.608685 6.2:+6107112 None:intergenic
ATAAGGGTAGAGCTGCCAAA+GGG 0.609579 6.2:-6108867 MS.gene031017:CDS
ATGGTATTTCTATTGTCCAA+GGG 0.621463 6.2:-6109022 MS.gene031017:CDS
CCTAATGTTCTACACACTTG+AGG 0.622034 6.2:-6107392 MS.gene031017:CDS
CTGGTAATTGGGAGATCCAG+GGG 0.623376 6.2:+6108150 None:intergenic
CACTAGTAAATGTTACACTT+AGG 0.626341 6.2:-6107080 None:intergenic
ATTAGGAACAGGAATTTGTG+AGG 0.633156 6.2:+6107432 None:intergenic
AACTGAGATGGATATTAACA+AGG 0.642088 6.2:-6109743 MS.gene031017:CDS
GAGTTTGAATCTGAAATGCA+TGG 0.645383 6.2:+6108808 None:intergenic
TTTGAGGACTAGTGTTACAT+GGG 0.649862 6.2:-6107143 MS.gene031017:CDS
TATAAGGGTAGAGCTGCCAA+AGG 0.669349 6.2:-6108868 MS.gene031017:CDS
GACATTTCACTAGTGCAAGG+TGG 0.776490 6.2:+6107115 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGAAAATTATTAAAATAAAG+AGG + chr6.2:6108538-6108557 None:intergenic 10.0%
!! TAATGAATAAAAAATTTGTA+GGG + chr6.2:6107435-6107454 None:intergenic 10.0%
!! TATATTAAATAGTAAAAATG+AGG + chr6.2:6108123-6108142 None:intergenic 10.0%
!!! ACACAAAATTTTAAATATTA+AGG - chr6.2:6107362-6107381 MS.gene031017:CDS 10.0%
!!! CTCTAAATTTTTTTTTATAA+TGG + chr6.2:6108255-6108274 None:intergenic 10.0%
!!! TTATTTCTAATTTTTACATT+TGG - chr6.2:6108400-6108419 MS.gene031017:intron 10.0%
!!! TTTTATGTTTTCAATTTAAT+TGG + chr6.2:6107708-6107727 None:intergenic 10.0%
!! AAATTGAATGGATAATTATT+AGG + chr6.2:6109274-6109293 None:intergenic 15.0%
!! ATAACTAAAATACTTACATT+TGG + chr6.2:6108087-6108106 None:intergenic 15.0%
!! CTAATGAATAAAAAATTTGT+AGG + chr6.2:6107436-6107455 None:intergenic 15.0%
!! TTATTAAAATAAAGAGGAAT+AGG + chr6.2:6108532-6108551 None:intergenic 15.0%
!!! AAAATGAAGTTAACATTTTT+TGG + chr6.2:6107750-6107769 None:intergenic 15.0%
!!! CATCTACAAATTTTATTAAA+TGG + chr6.2:6108204-6108223 None:intergenic 15.0%
!!! TATTTTTATAAGCCAAAAAT+AGG + chr6.2:6108354-6108373 None:intergenic 15.0%
!!! TTAACACTAAAAGTTTTTAT+CGG - chr6.2:6109099-6109118 MS.gene031017:intron 15.0%
!!! TTTTAATAAATTTCTTTGCA+AGG - chr6.2:6107487-6107506 MS.gene031017:CDS 15.0%
!! ATCAAATGAGAAATGAATTA+TGG - chr6.2:6108916-6108935 MS.gene031017:CDS 20.0%
!! CAATATTAGAAAAAGGAAAA+TGG + chr6.2:6107329-6107348 None:intergenic 20.0%
!! CTAAAAGATGAAGATTAAAA+TGG - chr6.2:6107535-6107554 MS.gene031017:CDS 20.0%
!! GATGCAAATAATCAATATAA+TGG - chr6.2:6109537-6109556 MS.gene031017:intron 20.0%
!! TGGTAAATAAGATAGAATAT+AGG + chr6.2:6107688-6107707 None:intergenic 20.0%
!!! CTTTTATCTGAAAACTTTTT+AGG + chr6.2:6108057-6108076 None:intergenic 20.0%
!!! TAACACTAAAAGTTTTTATC+GGG - chr6.2:6109100-6109119 MS.gene031017:intron 20.0%
!!! TATTATTTTCTGAACAGAAT+TGG + chr6.2:6108754-6108773 None:intergenic 20.0%
!!! TCTAGAACAATATTAGAAAA+AGG + chr6.2:6107336-6107355 None:intergenic 20.0%
! AAACTTACAAATGTAAGTGT+TGG - chr6.2:6108814-6108833 MS.gene031017:CDS 25.0%
! AATGGACCTACATAAAATTA+TGG - chr6.2:6109152-6109171 MS.gene031017:intron 25.0%
! ACTTGCTTAATAAGTTCAAT+AGG + chr6.2:6107210-6107229 None:intergenic 25.0%
! ATATTTACAAACATGATCCA+TGG - chr6.2:6107232-6107251 MS.gene031017:CDS 25.0%
! CTTCAAAACCAATATAGTTA+GGG + chr6.2:6109518-6109537 None:intergenic 25.0%
! GAATCCTGAAAAATTCATAA+AGG + chr6.2:6108599-6108618 None:intergenic 25.0%
! GTGTTATAAGAATTCTTACT+TGG + chr6.2:6107264-6107283 None:intergenic 25.0%
! TATAAGAATTCTTACTTGGA+AGG + chr6.2:6107260-6107279 None:intergenic 25.0%
! TATTGAACTTATTAAGCAAG+TGG - chr6.2:6107209-6107228 MS.gene031017:CDS 25.0%
! TATTTACAAACATGATCCAT+GGG - chr6.2:6107233-6107252 MS.gene031017:CDS 25.0%
! TCTTCAAAACCAATATAGTT+AGG + chr6.2:6109519-6109538 None:intergenic 25.0%
! TCTTGAATATTCACAATGTT+TGG + chr6.2:6109594-6109613 None:intergenic 25.0%
! TTATCAATAATGTCTCCATT+AGG + chr6.2:6109423-6109442 None:intergenic 25.0%
! TTTACATTTGGCATAAACAA+TGG - chr6.2:6108412-6108431 MS.gene031017:intron 25.0%
! TTTCCATCTGATGAATATAT+AGG + chr6.2:6107916-6107935 None:intergenic 25.0%
!! AGTATTAGAGTTAGTATTGA+TGG - chr6.2:6109216-6109235 MS.gene031017:intron 25.0%
!! TAGTCCTTTATGAATTTTTC+AGG - chr6.2:6108592-6108611 MS.gene031017:intron 25.0%
!! TGGATAAGAAAATGATGTTT+TGG - chr6.2:6107555-6107574 MS.gene031017:intron 25.0%
!! TTGTTGATAGGTTTGTAATT+TGG + chr6.2:6109363-6109382 None:intergenic 25.0%
!!! ATGAATTTTTCAGGATTCAT+GGG - chr6.2:6108601-6108620 MS.gene031017:intron 25.0%
!!! TATGAATTTTTCAGGATTCA+TGG - chr6.2:6108600-6108619 MS.gene031017:intron 25.0%
!!! TTATCTGAAAACTTTTTAGG+AGG + chr6.2:6108054-6108073 None:intergenic 25.0%
AAAACCAATATAGTTAGGGT+TGG + chr6.2:6109514-6109533 None:intergenic 30.0%
AAACTTGGAGACAAATTGAA+TGG + chr6.2:6109666-6109685 None:intergenic 30.0%
AACTGAGATGGATATTAACA+AGG - chr6.2:6107092-6107111 MS.gene031017:CDS 30.0%
AAGTCACTTGTCTTCTATAA+GGG - chr6.2:6107952-6107971 MS.gene031017:intron 30.0%
ATAAAATTATGGAATCCGCT+TGG - chr6.2:6109163-6109182 MS.gene031017:intron 30.0%
ATCAAATGCAGCTTAATCAA+TGG - chr6.2:6109613-6109632 MS.gene031017:CDS 30.0%
CTTAATCAATGGGAAAATCT+TGG - chr6.2:6109624-6109643 MS.gene031017:CDS 30.0%
CTTGTTGCTACAAAATTGAA+TGG + chr6.2:6109286-6109305 None:intergenic 30.0%
GTAACATTTACTAGTGACAT+AGG + chr6.2:6109751-6109770 None:intergenic 30.0%
TCAAATGCAGCTTAATCAAT+GGG - chr6.2:6109614-6109633 MS.gene031017:CDS 30.0%
! AATGGTATTTCTATTGTCCA+AGG - chr6.2:6107812-6107831 MS.gene031017:intron 30.0%
! AGGTCCATTTTCAAAATAGT+GGG + chr6.2:6109141-6109160 None:intergenic 30.0%
! ATGGTATTTCTATTGTCCAA+GGG - chr6.2:6107813-6107832 MS.gene031017:intron 30.0%
! ATTGTGTTGATGTTGTTGAT+AGG + chr6.2:6109375-6109394 None:intergenic 30.0%
! CGGATTCCATAATTTTATGT+AGG + chr6.2:6109161-6109180 None:intergenic 30.0%
! TAGGTCCATTTTCAAAATAG+TGG + chr6.2:6109142-6109161 None:intergenic 30.0%
! TCAACGCTAATTCTTTTGTT+AGG + chr6.2:6109190-6109209 None:intergenic 30.0%
! TGAGAAATTGTTGTTGGTAT+TGG + chr6.2:6109328-6109347 None:intergenic 30.0%
! TTTCTATATTTTCTGTCCCT+TGG + chr6.2:6107832-6107851 None:intergenic 30.0%
! TTTGCTGAATTTTTCTCTTG+AGG + chr6.2:6107179-6107198 None:intergenic 30.0%
AACAGGAATTTGTGAGGATT+TGG + chr6.2:6109400-6109419 None:intergenic 35.0%
AAGCCAAAAATAGGATGCAT+GGG + chr6.2:6108345-6108364 None:intergenic 35.0%
AATTCATTAACCATGCTTCC+TGG + chr6.2:6108707-6108726 None:intergenic 35.0%
AGGCCTATATATTCATCAGA+TGG - chr6.2:6107910-6107929 MS.gene031017:intron 35.0%
ATAATGTCTCCATTAGGAAC+AGG + chr6.2:6109417-6109436 None:intergenic 35.0%
ATCATCAATTGTGCACTTTG+TGG + chr6.2:6109478-6109497 None:intergenic 35.0%
ATGTTTGGTTGCATATCTTG+AGG + chr6.2:6109579-6109598 None:intergenic 35.0%
ATTAGGAACAGGAATTTGTG+AGG + chr6.2:6109406-6109425 None:intergenic 35.0%
ATTGGATGATGCATGAGTTT+AGG - chr6.2:6108001-6108020 MS.gene031017:intron 35.0%
CAAGTAGTGGTGAAAAAGAA+TGG - chr6.2:6107794-6107813 MS.gene031017:intron 35.0%
CTTTCCAACCCTAACTATAT+TGG - chr6.2:6109507-6109526 MS.gene031017:intron 35.0%
GAAGTCACTTGTCTTCTATA+AGG - chr6.2:6107951-6107970 MS.gene031017:intron 35.0%
TAAGCCAAAAATAGGATGCA+TGG + chr6.2:6108346-6108365 None:intergenic 35.0%
TCACAAATTCCTGTTCCTAA+TGG - chr6.2:6109405-6109424 MS.gene031017:intron 35.0%
TCATCAGATGGAAAATGCAT+TGG - chr6.2:6107922-6107941 MS.gene031017:intron 35.0%
TCATGTACAACAACAGATCA+AGG - chr6.2:6108776-6108795 MS.gene031017:CDS 35.0%
TGAAGCTGAGAAATTGTTGT+TGG + chr6.2:6109334-6109353 None:intergenic 35.0%
TTTACTAGTGACATAGGTTG+TGG + chr6.2:6109745-6109764 None:intergenic 35.0%
! AACGATAGATGGTGGTTATT+TGG - chr6.2:6108282-6108301 MS.gene031017:intron 35.0%
! ATTCTTTTGTTAGGTCCAAG+CGG + chr6.2:6109181-6109200 None:intergenic 35.0%
! GAGTTTGAATCTGAAATGCA+TGG + chr6.2:6108030-6108049 None:intergenic 35.0%
! TTTGAGGACTAGTGTTACAT+GGG - chr6.2:6109692-6109711 MS.gene031017:CDS 35.0%
!! AGACAATGCTTTTTGTACCA+TGG + chr6.2:6108663-6108682 None:intergenic 35.0%
!! ATGCTTTTTGTACCATGGAA+AGG + chr6.2:6108658-6108677 None:intergenic 35.0%
!! CTTACAAATGTAAGTGTTGG+AGG - chr6.2:6108817-6108836 MS.gene031017:CDS 35.0%
!! TGCTTTTTGTACCATGGAAA+GGG + chr6.2:6108657-6108676 None:intergenic 35.0%
!! TGGTCCCACTATTTTGAAAA+TGG - chr6.2:6109134-6109153 MS.gene031017:intron 35.0%
AACCATGCTTCCTGGTAATT+GGG + chr6.2:6108699-6108718 None:intergenic 40.0%
CCAAAGGGATGAAAACTGAT+TGG - chr6.2:6107983-6108002 MS.gene031017:intron 40.0%
CCAGCTCTTGTAACTCTATT+AGG + chr6.2:6107865-6107884 None:intergenic 40.0%
CCTAATAGAGTTACAAGAGC+TGG - chr6.2:6107862-6107881 MS.gene031017:intron 40.0%
CCTAATGTTCTACACACTTG+AGG - chr6.2:6109443-6109462 MS.gene031017:intron 40.0%
CCTCAAGTGTGTAGAACATT+AGG + chr6.2:6109446-6109465 None:intergenic 40.0%
GAAAACCAATTCCCTTTCCA+TGG - chr6.2:6108643-6108662 MS.gene031017:intron 40.0%
GAAAGACATCTCAACTAGGT+TGG + chr6.2:6108310-6108329 None:intergenic 40.0%
TAACCATGCTTCCTGGTAAT+TGG + chr6.2:6108700-6108719 None:intergenic 40.0%
TTGTACCATGGAAAGGGAAT+TGG + chr6.2:6108651-6108670 None:intergenic 40.0%
TTTATCGGGTGAAACTCATG+TGG - chr6.2:6109114-6109133 MS.gene031017:intron 40.0%
! ATGCCCATGCATCCTATTTT+TGG - chr6.2:6108339-6108358 MS.gene031017:intron 40.0%
! CCAATCAGTTTTCATCCCTT+TGG + chr6.2:6107986-6108005 None:intergenic 40.0%
! CTTTGAGGACTAGTGTTACA+TGG - chr6.2:6109691-6109710 MS.gene031017:CDS 40.0%
! GAGTTACAAGAGCTGGATTT+TGG - chr6.2:6107869-6107888 MS.gene031017:intron 40.0%
! GTCCTCAAAGCATCAAAACT+TGG + chr6.2:6109681-6109700 None:intergenic 40.0%
! TACAAGAGCTGGATTTTGGA+AGG - chr6.2:6107873-6107892 MS.gene031017:intron 40.0%
!! AAGGTTGATGATTTGATGCC+TGG - chr6.2:6107111-6107130 MS.gene031017:CDS 40.0%
!! CTCCAAGTTTTGATGCTTTG+AGG - chr6.2:6109676-6109695 MS.gene031017:CDS 40.0%
ACAGATCAAGGATCATCAGC+AGG - chr6.2:6108788-6108807 MS.gene031017:CDS 45.0%
ACCAACAAGCTCTTCATCTG+TGG + chr6.2:6107151-6107170 None:intergenic 45.0%
AGGATTCATGGGCAATCTGT+AGG - chr6.2:6108612-6108631 MS.gene031017:intron 45.0%
ATAAGGGTAGAGCTGCCAAA+GGG - chr6.2:6107968-6107987 MS.gene031017:intron 45.0%
CAAGAAGAGCTAGCAAGTAG+TGG - chr6.2:6107781-6107800 MS.gene031017:intron 45.0%
CCAACAAGCTCTTCATCTGT+GGG + chr6.2:6107150-6107169 None:intergenic 45.0%
GACATTTCACTAGTGCAAGG+TGG + chr6.2:6109723-6109742 None:intergenic 45.0%
GTGGACATTTCACTAGTGCA+AGG + chr6.2:6109726-6109745 None:intergenic 45.0%
TAGGATGCATGGGCATCAAA+CGG + chr6.2:6108335-6108354 None:intergenic 45.0%
TATAAGGGTAGAGCTGCCAA+AGG - chr6.2:6107967-6107986 MS.gene031017:intron 45.0%
TGTGCACTTTGTGGAACCAT+TGG + chr6.2:6109469-6109488 None:intergenic 45.0%
TTCTACACACTTGAGGCCAA+TGG - chr6.2:6109450-6109469 MS.gene031017:intron 45.0%
TTCTTACTTGGAAGGTCCCA+TGG + chr6.2:6107252-6107271 None:intergenic 45.0%
!! AAAAAGCATTGTCTCACCCC+TGG - chr6.2:6108669-6108688 MS.gene031017:intron 45.0%
!!! ATATATCTTTTATAAAAATA+TGG - chr6.2:6107461-6107480 MS.gene031017:CDS 5.0%
!!! ATTTTTATAAAAGATATATA+TGG + chr6.2:6107460-6107479 None:intergenic 5.0%
!!! TTTTTATAAAAGATATATAT+GGG + chr6.2:6107459-6107478 None:intergenic 5.0%
CCCACAGATGAAGAGCTTGT+TGG - chr6.2:6107147-6107166 MS.gene031017:CDS 50.0%
CCTGGTAATTGGGAGATCCA+GGG + chr6.2:6108689-6108708 None:intergenic 50.0%
CTCCCAATTACCAGGAAGCA+TGG - chr6.2:6108694-6108713 MS.gene031017:intron 50.0%
CTGGTAATTGGGAGATCCAG+GGG + chr6.2:6108688-6108707 None:intergenic 50.0%
GGAAGGCAACTGGAACTGAT+AGG - chr6.2:6107890-6107909 MS.gene031017:intron 50.0%
GGCGGAAAGACATCTCAACT+AGG + chr6.2:6108314-6108333 None:intergenic 50.0%
GTGGGATGAAAACGAAAGCC+AGG + chr6.2:6107132-6107151 None:intergenic 50.0%
TCCTGGTAATTGGGAGATCC+AGG + chr6.2:6108690-6108709 None:intergenic 50.0%
!! AGAGCGCTGCAAACGATAGA+TGG - chr6.2:6108271-6108290 MS.gene031017:intron 50.0%
!! GCTGGATTTTGGAAGGCAAC+TGG - chr6.2:6107880-6107899 MS.gene031017:intron 50.0%
CCCTGGATCTCCCAATTACC+AGG - chr6.2:6108686-6108705 MS.gene031017:intron 55.0%
GATGCATGGGCATCAAACGG+CGG + chr6.2:6108332-6108351 None:intergenic 55.0%
GCGCTGCAAACGATAGATGG+TGG - chr6.2:6108274-6108293 MS.gene031017:intron 55.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 6107081 6109776 6107081 ID=MS.gene031017
chr6.2 mRNA 6107081 6109776 6107081 ID=MS.gene031017.t1;Parent=MS.gene031017
chr6.2 exon 6109593 6109776 6109593 ID=MS.gene031017.t1.exon1;Parent=MS.gene031017.t1
chr6.2 CDS 6109593 6109776 6109593 ID=cds.MS.gene031017.t1;Parent=MS.gene031017.t1
chr6.2 exon 6108768 6109072 6108768 ID=MS.gene031017.t1.exon2;Parent=MS.gene031017.t1
chr6.2 CDS 6108768 6109072 6108768 ID=cds.MS.gene031017.t1;Parent=MS.gene031017.t1
chr6.2 exon 6108032 6108243 6108032 ID=MS.gene031017.t1.exon3;Parent=MS.gene031017.t1
chr6.2 CDS 6108032 6108243 6108032 ID=cds.MS.gene031017.t1;Parent=MS.gene031017.t1
chr6.2 exon 6107081 6107558 6107081 ID=MS.gene031017.t1.exon4;Parent=MS.gene031017.t1
chr6.2 CDS 6107081 6107558 6107081 ID=cds.MS.gene031017.t1;Parent=MS.gene031017.t1
Gene Sequence

>MS.gene031017

ATGGAGGAAAGAACTGAGATGGATATTAACAAGGTTGATGATTTGATGCCTGGCTTTCGTTTTCATCCCACAGATGAAGAGCTTGTTGGTTTTTACCTCAAGAGAAAAATTCAGCAAAAATCTCTTCCTATTGAACTTATTAAGCAAGTGGATATTTACAAACATGATCCATGGGACCTTCCAAGTAAGAATTCTTATAACACAAACTTAATATTTTCTAGCTTTCTCTTGTTTTAACATAAAATCCATTTTCCTTTTTCTAATATTGTTCTAGAAAGTGAACACAAAATTTTAAATATTAAGGTTCTGTTTAATTGAAGAAAATAATCAGTTTACATTTTAAATTTTGATCCCTACAAATTTTTTATTCATTAGCCCATATATATCTTTTATAAAAATATGGTATTTTTAATAAATTTCTTTGCAAGGACTGAAAAAGACTATATTTAATTTTCTAAAAGATGAAGATTAAAATGGATAAGAAAATGATGTTTTGGTATTTTAGAATTTCATTTTTTTTTGAATCACAATATTTTTGAATTTCATAAAAATGTTGAATAAGTTTTTAAAAATTGTACAAAAAAATGACAAGAGAATTATTGAACCTATATTCTATCTTATTTACCAATTAAATTGAAAACATAAAATATGAAACTATTTTATTGACCAAAAAATGTTAACTTCATTTTATTTTTGTAAACAAGAAGAGCTAGCAAGTAGTGGTGAAAAAGAATGGTATTTCTATTGTCCAAGGGACAGAAAATATAGAAACAGTTCAAGACCTAATAGAGTTACAAGAGCTGGATTTTGGAAGGCAACTGGAACTGATAGGCCTATATATTCATCAGATGGAAAATGCATTGGTTTGAAGAAGTCACTTGTCTTCTATAAGGGTAGAGCTGCCAAAGGGATGAAAACTGATTGGATGATGCATGAGTTTAGGTTACCATGCATTTCAGATTCAAACTCTCCTCCTAAAAAGTTTTCAGATAAAAGTTTCTCTCCAAATGTAAGTATTTTAGTTATTTCATACTACTTACCTCATTTTTACTATTTAATATATTTTTACTAGATAATTTTATTGTAGAATATTATAAGTCAATATTAGTTTTAAGTTGCACCATTTAATAAAATTTGTAGATGCTTACATACATGCATTATAAAAAAAATACCATTATAAAAAAAAATTTAGAGCGCTGCAAACGATAGATGGTGGTTATTTGGTACCAACCTAGTTGAGATGTCTTTCCGCCGTTTGATGCCCATGCATCCTATTTTTGGCTTATAAAAATATAGTATGAAATAAGAACAGTCAAATTTTATTTCTAATTTTTACATTTGGCATAAACAATGGCTAATCACTTATCTGTTAAATTAAATGAAAAAAATAAATAAATTATAGCTAAATTTTATTAAATAGACATTGTTAAGTTTTGTTTTGTCATAAACCTATTCCTCTTTATTTTAATAATTTTCTACTAATTTTTTCATTAGTTCTATACTAAACTAATTAGTCCTTTATGAATTTTTCAGGATTCATGGGCAATCTGTAGGATCTTCAAGAAAACCAATTCCCTTTCCATGGTACAAAAAGCATTGTCTCACCCCTGGATCTCCCAATTACCAGGAAGCATGGTTAATGAATTACTCACACAAACTACAAACATCAACCAATTCTGTTCAGAAAATAATATATCATGTACAACAACAGATCAAGGATCATCAGCAGGAACAAACTTACAAATGTAAGTGTTGGAGGTTTTCAATAATATTTTTTTTAGCACTACTATAATATCTATTTACTTATTATATTTATATAAAGAATTAGATGCAAAATCAAATGAGAAATGAATTATGGAATAATTATTTAGTTTCTTGTATGAGAAGAAATATTTTTATTGACACTTAAATAAGAAAATCATCAATATTTTCATAATATTAAAAATCGTAGATAACAATTTTGATGTATATTCAAAAATAAAATATTAAGTGATTTCAAACTTACTCTAAAACTCTTTTTAACACTAAAAGTTTTTATCGGGTGAAACTCATGTGGTCCCACTATTTTGAAAATGGACCTACATAAAATTATGGAATCCGCTTGGACCTAACAAAAGAATTAGCGTTGAAAAAAGAGTATTAGAGTTAGTATTGATGGCACTACGCACTACAAATTTATATATCAATGTGCCTAATAATTATCCATTCAATTTTGTAGCAACAAGCATGCGCTACAACAAGTTTCCAATACCAACAACAATTTCTCAGCTTCAGATTTTCCAAATTACAAACCTATCAACAACATCAACACAATTTCCAAATCCTCACAAATTCCTGTTCCTAATGGAGACATTATTGATAACCTAATGTTCTACACACTTGAGGCCAATGGTTCCACAAAGTGCACAATTGATGATAGTTCAATTCTTTCCAACCCTAACTATATTGGTTTTGAAGATGCAAATAATCAATATAATGGCTTCTCAATTAGTTTACCTCAAGATATGCAACCAAACATTGTGAATATTCAAGATCAAATGCAGCTTAATCAATGGGAAAATCTTGGAAGAACAATTGAATTTCCATTCAATTTGTCTCCAAGTTTTGATGCTTTGAGGACTAGTGTTACATGGGACTCACCACCTTGCACTAGTGAAATGTCCACAACCTATGTCACTAGTAAATGTTACACTTAG
Protein sequence

>MS.gene031017.t1

MEERTEMDINKVDDLMPGFRFHPTDEELVGFYLKRKIQQKSLPIELIKQVDIYKHDPWDLPKELASSGEKEWYFYCPRDRKYRNSSRPNRVTRAGFWKATGTDRPIYSSDGKCIGLKKSLVFYKGRAAKGMKTDWMMHEFRLPCISDSNSPPKKFSDKSFSPNDSWAICRIFKKTNSLSMVQKALSHPWISQLPGSMVNELLTQTTNINQFCSENNISCTTTDQGSSAGTNLQINKHALQQVSNTNNNFSASDFPNYKPINNINTISKSSQIPVPNGDIIDNLMFYTLEANGSTKCTIDDSSILSNPNYIGFEDANNQYNGFSISLPQDMQPNIVNIQDQMQLNQWENLGRTIEFPFNLSPSFDALRTSVTWDSPPCTSEMSTTYVTSKCYT