AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene031038

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031038.t1 MTR_6g012180 98.428 318 5 0 1 318 1 318 0.0 646
MS.gene031038.t1 MTR_7g010210 65.951 326 82 8 1 309 1 314 5.54e-142 404
MS.gene031038.t1 MTR_7g010210 62.379 311 64 5 1 309 1 260 1.28e-127 365
MS.gene031038.t1 MTR_0140s0030 53.517 327 127 9 1 309 2 321 4.61e-109 320
MS.gene031038.t1 MTR_0489s0020 53.517 327 127 9 1 309 2 321 4.61e-109 320
MS.gene031038.t1 MTR_3g039990 54.517 321 102 9 1 306 2 293 3.24e-107 315
MS.gene031038.t1 MTR_7g087130 56.897 232 62 3 1 230 1 196 1.48e-77 240
MS.gene031038.t1 MTR_6g012690 69.748 119 36 0 1 119 1 119 4.24e-59 193
MS.gene031038.t1 MTR_4g478180 68.908 119 37 0 1 119 2 120 3.86e-58 191
MS.gene031038.t1 MTR_1g100653 67.797 118 38 0 1 118 1 118 5.87e-58 189
MS.gene031038.t1 MTR_1g076150 69.492 118 36 0 1 118 1 118 6.77e-58 187
MS.gene031038.t1 MTR_7g011170 68.067 119 38 0 1 119 1 119 3.44e-57 187
MS.gene031038.t1 MTR_7g076740 69.167 120 36 1 1 119 1 120 4.31e-57 187
MS.gene031038.t1 MTR_2g089620 66.102 118 40 0 1 118 1 118 1.39e-56 186
MS.gene031038.t1 MTR_1g043050 68.103 116 37 0 1 116 1 116 2.59e-56 183
MS.gene031038.t1 MTR_3g074520 65.546 119 41 0 1 119 1 119 2.97e-56 186
MS.gene031038.t1 MTR_1g043080 68.103 116 37 0 1 116 1 116 5.78e-56 182
MS.gene031038.t1 MTR_4g082290 68.067 119 38 0 1 119 1 119 2.82e-55 185
MS.gene031038.t1 MTR_4g082230 68.067 119 38 0 1 119 1 119 1.15e-54 183
MS.gene031038.t1 MTR_5g007370 63.866 119 43 0 1 119 1 119 4.77e-54 179
MS.gene031038.t1 MTR_7g115650 60.331 121 48 0 1 121 1 121 7.17e-54 175
MS.gene031038.t1 MTR_5g029840 65.546 119 41 0 1 119 1 119 1.57e-53 178
MS.gene031038.t1 MTR_4g121460 64.655 116 41 0 1 116 1 116 3.70e-53 177
MS.gene031038.t1 MTR_8g027345 57.895 133 54 1 1 133 1 131 1.48e-52 175
MS.gene031038.t1 MTR_7g096930 64.655 116 41 0 1 116 1 116 1.78e-52 174
MS.gene031038.t1 MTR_2g011660 63.333 120 43 1 1 119 1 120 1.86e-52 176
MS.gene031038.t1 MTR_7g117730 61.667 120 46 0 1 120 1 120 2.14e-52 173
MS.gene031038.t1 MTR_4g091490 61.667 120 45 1 1 119 1 120 5.21e-52 175
MS.gene031038.t1 MTR_8g031360 57.143 147 50 4 1 145 1 136 8.15e-52 173
MS.gene031038.t1 MTR_4g125520 38.832 291 147 7 1 280 1 271 1.39e-51 172
MS.gene031038.t1 MTR_5g078140 64.706 119 42 0 1 119 1 119 3.01e-51 172
MS.gene031038.t1 MTR_3g461490 50.625 160 72 1 1 160 1 153 3.15e-51 172
MS.gene031038.t1 MTR_3g065440 64.706 119 42 0 1 119 1 119 3.64e-51 171
MS.gene031038.t1 MTR_3g097450 63.793 116 42 0 1 116 1 116 3.69e-51 171
MS.gene031038.t1 MTR_2g034790 38.060 268 153 4 1 256 1 267 8.93e-51 171
MS.gene031038.t1 MTR_4g073420 45.946 185 90 1 1 185 1 175 1.68e-50 169
MS.gene031038.t1 MTR_6g009430 61.345 119 46 0 1 119 1 119 4.25e-50 169
MS.gene031038.t1 MTR_3g103570 65.812 117 39 1 1 116 1 117 2.61e-49 168
MS.gene031038.t1 MTR_5g079670 60.169 118 47 0 2 119 1 118 4.30e-49 163
MS.gene031038.t1 MTR_1g017000 62.393 117 43 1 1 116 1 117 5.02e-49 164
MS.gene031038.t1 MTR_4g102380 63.025 119 44 0 1 119 1 119 6.22e-49 164
MS.gene031038.t1 MTR_4g057635 60.484 124 48 1 1 123 1 124 1.17e-48 165
MS.gene031038.t1 MTR_1g017140 64.103 117 41 1 1 116 1 117 3.18e-48 165
MS.gene031038.t1 MTR_7g102110 59.677 124 49 1 1 123 1 124 4.36e-48 162
MS.gene031038.t1 MTR_5g014990 64.103 117 41 1 1 116 1 117 9.49e-48 162
MS.gene031038.t1 MTR_8g098860 59.322 118 48 0 1 118 1 118 1.37e-47 162
MS.gene031038.t1 MTR_2g089450 53.957 139 64 0 1 139 1 139 3.13e-47 159
MS.gene031038.t1 MTR_3g083540 60.714 112 44 0 5 116 34 145 8.65e-47 160
MS.gene031038.t1 MTR_6g090405 60.317 126 49 1 1 125 1 126 9.31e-47 158
MS.gene031038.t1 MTR_2g067420 60.550 109 43 0 3 111 5 113 1.46e-46 160
MS.gene031038.t1 MTR_2g095520 63.964 111 39 1 1 110 1 111 1.46e-46 160
MS.gene031038.t1 MTR_1g085040 60.169 118 47 0 1 118 1 118 3.63e-46 160
MS.gene031038.t1 MTR_8g095390 57.759 116 49 0 1 116 1 116 3.74e-46 159
MS.gene031038.t1 MTR_2g064160 59.459 111 45 0 6 116 5 115 1.04e-45 157
MS.gene031038.t1 MTR_0251s0050 54.688 128 57 1 1 127 1 128 1.35e-45 156
MS.gene031038.t1 MTR_4g128670 52.907 172 70 4 1 164 1 169 2.25e-45 157
MS.gene031038.t1 MTR_4g105130 60.169 118 47 0 1 118 1 118 9.66e-45 156
MS.gene031038.t1 MTR_0008s0390 53.788 132 59 2 1 130 1 132 1.13e-44 154
MS.gene031038.t1 MTR_0063s0090 59.292 113 46 0 1 113 1 113 1.81e-44 151
MS.gene031038.t1 MTR_1g085640 56.780 118 51 0 1 118 1 118 3.10e-44 155
MS.gene031038.t1 MTR_7g110830 57.627 118 50 0 1 118 1 118 3.67e-44 155
MS.gene031038.t1 MTR_2g097910 60.177 113 45 0 12 124 20 132 4.04e-44 153
MS.gene031038.t1 MTR_4g097570 61.818 110 41 1 1 109 1 110 4.41e-44 152
MS.gene031038.t1 MTR_1g112760 44.292 219 95 7 3 209 4 207 6.66e-44 150
MS.gene031038.t1 MTR_5g010020 61.321 106 41 0 6 111 6 111 7.94e-44 153
MS.gene031038.t1 MTR_5g042030 57.798 109 46 0 11 119 6 114 2.04e-43 150
MS.gene031038.t1 MTR_2g099740 59.459 111 45 0 6 116 6 116 2.36e-43 154
MS.gene031038.t1 MTR_4g100720 57.500 120 51 0 9 128 10 129 3.72e-43 146
MS.gene031038.t1 MTR_8g017440 57.658 111 47 0 6 116 6 116 4.23e-43 151
MS.gene031038.t1 MTR_3g077110 60.169 118 47 0 1 118 1 118 4.71e-43 151
MS.gene031038.t1 MTR_0008s0470 56.897 116 49 1 1 115 1 116 5.36e-43 150
MS.gene031038.t1 MTR_0008s0280 56.140 114 50 0 1 114 1 114 5.74e-43 148
MS.gene031038.t1 MTR_4g065017 59.292 113 46 0 12 124 17 129 6.90e-43 150
MS.gene031038.t1 MTR_2g089420 57.627 118 49 1 1 118 1 117 1.18e-42 153
MS.gene031038.t1 MTR_7g035075 56.522 115 50 0 12 126 14 128 1.47e-42 146
MS.gene031038.t1 MTR_8g017500 52.419 124 59 0 1 124 1 124 1.55e-42 150
MS.gene031038.t1 MTR_7g109320 54.400 125 57 0 1 125 1 125 1.68e-42 150
MS.gene031038.t1 MTR_3g052450 57.658 111 47 0 8 118 36 146 1.69e-42 154
MS.gene031038.t1 MTR_3g052430 59.813 107 43 0 12 118 41 147 1.79e-42 154
MS.gene031038.t1 MTR_7g111290 62.385 109 41 0 1 109 1 109 1.82e-42 150
MS.gene031038.t1 MTR_8g017540 57.658 111 47 0 6 116 52 162 1.91e-42 151
MS.gene031038.t1 MTR_8g020490 59.504 121 45 1 1 121 1 117 1.91e-42 147
MS.gene031038.t1 MTR_4g097570 61.261 111 41 2 1 109 1 111 2.15e-42 148
MS.gene031038.t1 MTR_4g485530 56.780 118 50 1 2 118 1 118 2.93e-42 145
MS.gene031038.t1 MTR_8g042410 61.321 106 41 0 12 117 37 142 6.46e-42 152
MS.gene031038.t1 MTR_5g079120 51.449 138 61 2 8 140 57 193 1.64e-41 146
MS.gene031038.t1 MTR_1g100667 59.434 106 43 0 13 118 14 119 2.29e-41 145
MS.gene031038.t1 MTR_3g011610 59.434 106 43 0 12 117 37 142 2.61e-41 150
MS.gene031038.t1 MTR_3g028740 59.091 110 45 0 8 117 18 127 5.87e-41 145
MS.gene031038.t1 MTR_1g086510 55.172 116 52 0 11 126 20 135 1.28e-40 143
MS.gene031038.t1 MTR_0197s0010 60.377 106 42 0 16 121 5 110 1.48e-40 141
MS.gene031038.t1 MTR_8g017340 56.410 117 50 1 1 116 1 117 9.39e-40 145
MS.gene031038.t1 MTR_1g086530 52.101 119 57 0 8 126 29 147 9.98e-40 141
MS.gene031038.t1 MTR_6g006030 50.820 122 58 1 1 120 1 122 1.50e-39 138
MS.gene031038.t1 MTR_8g017390 57.143 112 47 1 6 116 6 117 1.87e-39 144
MS.gene031038.t1 MTR_2g088170 59.633 109 44 0 9 117 26 134 1.93e-39 144
MS.gene031038.t1 MTR_1g045610 57.143 112 48 0 6 117 15 126 2.60e-39 139
MS.gene031038.t1 MTR_5g079220 56.364 110 48 0 7 116 16 125 9.04e-39 138
MS.gene031038.t1 MTR_5g079290 58.491 106 44 0 11 116 16 121 1.11e-38 137
MS.gene031038.t1 MTR_0247s0040 59.223 103 42 0 11 113 6 108 1.22e-38 135
MS.gene031038.t1 MTR_1g110460 50.000 118 59 0 12 129 26 143 2.67e-38 138
MS.gene031038.t1 MTR_1g073170 58.095 105 44 0 13 117 21 125 3.98e-38 136
MS.gene031038.t1 MTR_6g055910 57.009 107 46 0 9 115 11 117 6.25e-38 136
MS.gene031038.t1 MTR_8g017350 54.701 117 52 1 1 116 1 117 7.20e-38 142
MS.gene031038.t1 MTR_0193s0090 40.000 190 99 3 11 185 6 195 1.11e-37 133
MS.gene031038.t1 MTR_1g021230 57.692 104 44 0 12 115 57 160 1.88e-37 139
MS.gene031038.t1 MTR_5g078800 57.547 106 45 0 11 116 6 111 4.67e-37 133
MS.gene031038.t1 MTR_2g096380 53.271 107 50 0 9 115 3 109 2.17e-36 131
MS.gene031038.t1 MTR_5g078860 56.604 106 46 0 11 116 6 111 2.61e-36 132
MS.gene031038.t1 MTR_7g017260 56.481 108 45 1 11 116 24 131 3.02e-36 132
MS.gene031038.t1 MTR_5g078910 56.190 105 46 0 12 116 7 111 4.90e-36 132
MS.gene031038.t1 MTR_0001s0360 56.604 106 46 0 11 116 6 111 1.04e-35 129
MS.gene031038.t1 MTR_5g078950 56.731 104 45 0 10 113 5 108 1.44e-35 129
MS.gene031038.t1 MTR_8g060940 56.863 102 44 0 11 112 6 107 3.82e-35 128
MS.gene031038.t1 MTR_2g033170 49.580 119 60 0 8 126 20 138 1.41e-34 129
MS.gene031038.t1 MTR_5g078930 56.311 103 45 0 13 115 10 112 2.88e-34 125
MS.gene031038.t1 MTR_8g006470 49.558 113 55 2 8 119 6 117 5.15e-34 126
MS.gene031038.t1 MTR_5g007300 59.091 88 36 0 1 88 53 140 2.71e-33 120
MS.gene031038.t1 MTR_4g123040 48.739 119 61 0 8 126 20 138 1.01e-32 123
MS.gene031038.t1 MTR_3g045430 49.167 120 60 1 1 119 1 120 4.21e-32 121
MS.gene031038.t1 MTR_4g063100 49.533 107 54 0 9 115 4 110 4.81e-32 120
MS.gene031038.t1 MTR_1g062940 49.057 106 54 0 12 117 6 111 8.50e-32 118
MS.gene031038.t1 MTR_5g062790 44.030 134 73 2 12 144 9 141 1.15e-31 120
MS.gene031038.t1 MTR_5g088080 42.857 133 74 2 13 144 13 144 3.08e-31 118
MS.gene031038.t1 MTR_5g088150 42.857 133 74 2 13 144 13 144 3.08e-31 118
MS.gene031038.t1 MTR_5g488210 42.857 133 74 2 13 144 13 144 3.08e-31 118
MS.gene031038.t1 MTR_5g088640 42.537 134 75 2 12 144 12 144 4.45e-31 118
MS.gene031038.t1 MTR_4g029540 48.077 104 53 1 12 114 10 113 4.89e-31 118
MS.gene031038.t1 MTR_5g488170 42.857 133 74 2 13 144 13 144 5.38e-31 117
MS.gene031038.t1 MTR_5g088610 49.533 107 53 1 12 117 9 115 2.82e-30 117
MS.gene031038.t1 MTR_1g083630 47.273 110 58 0 8 117 8 117 7.59e-30 119
MS.gene031038.t1 MTR_4g019370 50.000 102 50 1 14 115 38 138 1.06e-29 116
MS.gene031038.t1 MTR_5g016510 47.273 110 49 2 14 119 5 109 1.92e-27 109
MS.gene031038.t1 MTR_7g111290 71.212 66 19 0 44 109 2 67 1.58e-26 107
MS.gene031038.t1 MTR_4g094982 47.170 106 47 2 14 115 5 105 2.47e-26 105
MS.gene031038.t1 MTR_3g101290 48.039 102 52 1 14 115 37 137 5.29e-26 103
MS.gene031038.t1 MTR_6g055910 63.380 71 26 0 45 115 18 88 6.38e-26 103
MS.gene031038.t1 MTR_2g096380 59.722 72 29 0 44 115 19 90 1.39e-25 102
MS.gene031038.t1 MTR_6g015455 48.113 106 46 2 14 115 5 105 3.26e-25 106
MS.gene031038.t1 MTR_3g110028 44.660 103 56 1 14 116 85 186 1.36e-24 104
MS.gene031038.t1 MTR_1g085880 48.571 105 52 2 12 114 11 115 1.84e-24 98.6
MS.gene031038.t1 MTR_4g063100 58.333 72 30 0 44 115 10 81 2.99e-24 98.6
MS.gene031038.t1 MTR_6g074860 44.554 101 55 1 14 114 4 103 3.58e-24 99.0
MS.gene031038.t1 MTR_7g061550 41.667 108 61 1 17 122 10 117 1.05e-23 100
MS.gene031038.t1 MTR_1g085770 48.571 105 52 2 12 114 11 115 1.55e-23 98.6
MS.gene031038.t1 MTR_7g061330 46.729 107 48 2 14 116 113 214 1.61e-23 101
MS.gene031038.t1 MTR_7g461410 46.729 107 48 2 14 116 113 214 1.61e-23 101
MS.gene031038.t1 MTR_4g128190 43.636 110 47 3 10 118 9 104 2.36e-23 96.7
MS.gene031038.t1 MTR_7g061330 46.729 107 48 2 14 116 77 178 2.51e-23 100
MS.gene031038.t1 MTR_1g026870 41.748 103 59 1 14 116 85 186 3.04e-23 100
MS.gene031038.t1 MTR_0023s0210 55.128 78 35 0 11 88 6 83 4.81e-23 91.3
MS.gene031038.t1 MTR_6g027340 35.385 130 80 2 14 140 16 144 7.34e-23 94.4
MS.gene031038.t1 MTR_6g027370 39.640 111 66 1 14 124 99 208 8.05e-23 97.4
MS.gene031038.t1 MTR_5g082910 46.226 106 55 2 8 112 12 116 4.27e-22 94.4
MS.gene031038.t1 MTR_3g463400 38.938 113 68 1 3 115 122 233 5.99e-22 95.9
MS.gene031038.t1 MTR_4g105660 41.121 107 62 1 12 118 178 283 1.72e-21 94.7
MS.gene031038.t1 MTR_7g037260 39.496 119 70 2 12 129 143 260 2.47e-21 93.2
MS.gene031038.t1 MTR_5g070020 40.566 106 62 1 10 115 118 222 3.83e-21 92.8
MS.gene031038.t1 MTR_3g077650 41.905 105 60 1 14 118 181 284 4.71e-21 93.6
MS.gene031038.t1 MTR_6g027360 34.091 132 83 2 12 140 76 206 4.94e-21 91.7
MS.gene031038.t1 MTR_5g049190 41.176 102 57 2 8 108 13 112 5.38e-21 90.5
MS.gene031038.t1 MTR_4g082040 40.000 105 62 1 14 118 105 208 1.01e-20 92.4
MS.gene031038.t1 MTR_5g041570 40.000 105 62 1 14 118 134 237 1.10e-20 92.4
MS.gene031038.t1 MTR_7g451170 39.496 119 66 3 14 129 191 306 1.44e-20 91.7
MS.gene031038.t1 MTR_4g088015 38.655 119 71 2 12 129 219 336 7.34e-20 90.1
MS.gene031038.t1 MTR_7g450950 36.496 137 76 4 14 142 157 290 7.74e-20 89.0
MS.gene031038.t1 MTR_1g057980 42.424 99 56 1 12 110 78 175 8.80e-20 88.2
MS.gene031038.t1 MTR_3g089045 37.838 111 68 1 8 118 10 119 1.14e-18 84.7
MS.gene031038.t1 MTR_7g086960 39.216 102 61 1 14 115 89 189 2.47e-18 84.7
MS.gene031038.t1 MTR_5g010650 41.000 100 50 2 14 109 110 204 1.02e-17 84.0
MS.gene031038.t1 MTR_7g035350 40.426 94 55 1 17 110 228 320 1.92e-17 82.8
MS.gene031038.t1 MTR_7g037130 36.134 119 74 2 12 129 143 260 2.11e-17 82.0
MS.gene031038.t1 MTR_5g038910 38.614 101 61 1 17 117 29 128 3.16e-16 79.3
MS.gene031038.t1 MTR_5g038910 38.614 101 61 1 17 117 29 128 3.21e-16 79.0
MS.gene031038.t1 MTR_8g468380 38.614 101 61 1 17 117 25 124 7.02e-16 78.2
MS.gene031038.t1 MTR_2g096380 52.083 48 23 0 70 117 1 48 2.41e-11 62.0
MS.gene031038.t1 MTR_6g055910 56.522 46 20 0 70 115 2 47 8.07e-11 61.2
MS.gene031038.t1 MTR_4g063100 54.348 46 21 0 70 115 1 46 8.62e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene031038.t1 AT3G28910 54.969 322 117 6 1 306 1 310 2.73e-110 323
MS.gene031038.t1 AT3G47600 52.484 322 125 6 1 302 1 314 7.58e-102 302
MS.gene031038.t1 AT5G62470 50.700 357 118 11 1 312 1 344 3.75e-99 296
MS.gene031038.t1 AT5G62470 50.700 357 117 12 1 312 1 343 1.06e-97 292
MS.gene031038.t1 AT1G74650 49.558 339 103 8 1 302 1 308 5.68e-92 277
MS.gene031038.t1 AT1G08810 59.276 221 36 4 1 221 1 167 7.56e-83 252
MS.gene031038.t1 AT3G47600 45.745 282 117 7 45 302 39 308 6.74e-67 213
MS.gene031038.t1 AT3G01140 49.029 206 90 4 1 194 1 203 2.60e-60 196
MS.gene031038.t1 AT3G01140 48.544 206 91 4 1 194 44 246 3.18e-59 195
MS.gene031038.t1 AT5G15310 69.748 119 36 0 1 119 1 119 3.93e-59 190
MS.gene031038.t1 AT5G15310 42.254 284 132 9 1 267 1 269 6.39e-59 192
MS.gene031038.t1 AT5G15310 69.748 119 36 0 1 119 1 119 7.70e-59 192
MS.gene031038.t1 AT3G61250 54.217 166 70 3 1 160 1 166 2.06e-57 187
MS.gene031038.t1 AT2G31180 68.644 118 37 0 1 118 1 118 2.93e-56 183
MS.gene031038.t1 AT3G02940 64.706 119 42 0 1 119 1 119 4.66e-56 184
MS.gene031038.t1 AT4G28110 65.254 118 41 0 1 118 1 118 6.87e-56 183
MS.gene031038.t1 AT3G23250 67.521 117 38 0 1 117 1 117 7.24e-56 183
MS.gene031038.t1 AT4G21440 65.546 119 41 0 1 119 1 119 8.30e-56 185
MS.gene031038.t1 AT5G16770 65.546 119 41 0 1 119 1 119 8.51e-56 184
MS.gene031038.t1 AT5G16770 65.546 119 41 0 1 119 1 119 8.51e-56 184
MS.gene031038.t1 AT3G02940 64.706 119 42 0 1 119 1 119 1.03e-55 184
MS.gene031038.t1 AT3G02940 64.706 119 42 0 1 119 1 119 1.03e-55 184
MS.gene031038.t1 AT5G16770 65.546 119 41 0 1 119 1 119 2.89e-55 183
MS.gene031038.t1 AT5G16770 65.546 119 41 0 1 119 1 119 2.89e-55 183
MS.gene031038.t1 AT1G06180 63.492 126 46 0 1 126 1 126 2.01e-53 175
MS.gene031038.t1 AT4G05100 64.167 120 42 1 1 119 1 120 4.83e-53 177
MS.gene031038.t1 AT1G34670 63.025 119 44 0 1 119 1 119 6.93e-53 177
MS.gene031038.t1 AT1G56160 62.281 114 43 0 3 116 5 118 7.96e-53 176
MS.gene031038.t1 AT1G66230 55.556 144 64 0 1 144 1 144 7.72e-52 172
MS.gene031038.t1 AT2G16720 64.655 116 41 0 1 116 1 116 1.04e-51 172
MS.gene031038.t1 AT5G60890 63.559 118 43 0 1 118 1 118 1.13e-51 172
MS.gene031038.t1 AT5G56110 58.015 131 55 0 1 131 1 131 1.61e-51 173
MS.gene031038.t1 AT5G54230 70.370 108 32 0 12 119 12 119 2.56e-51 172
MS.gene031038.t1 AT5G61420 62.931 116 43 0 1 116 1 116 2.61e-51 174
MS.gene031038.t1 AT4G09460 62.931 116 43 0 1 116 1 116 2.89e-51 169
MS.gene031038.t1 AT1G35515 61.207 116 45 0 1 116 1 116 6.25e-51 168
MS.gene031038.t1 AT1G79180 63.158 114 42 0 3 116 5 118 1.09e-50 170
MS.gene031038.t1 AT4G17785 62.500 120 44 1 1 119 1 120 1.74e-50 171
MS.gene031038.t1 AT4G12350 60.465 129 51 0 1 129 1 129 2.10e-50 169
MS.gene031038.t1 AT4G17785 62.500 120 44 1 1 119 1 120 2.63e-50 171
MS.gene031038.t1 AT5G07690 62.931 116 43 0 1 116 1 116 2.76e-50 170
MS.gene031038.t1 AT1G18570 64.706 119 41 1 1 118 1 119 3.54e-50 170
MS.gene031038.t1 AT1G22640 61.207 116 45 0 1 116 1 116 4.11e-50 167
MS.gene031038.t1 AT1G74080 61.017 118 46 0 1 118 1 118 5.45e-50 169
MS.gene031038.t1 AT4G38620 61.207 116 45 0 1 116 1 116 6.64e-50 167
MS.gene031038.t1 AT3G13540 63.393 112 41 0 5 116 16 127 1.15e-49 166
MS.gene031038.t1 AT5G10280 60.504 119 47 0 1 119 1 119 2.91e-49 167
MS.gene031038.t1 AT5G65230 60.504 119 47 0 1 119 1 119 3.87e-49 166
MS.gene031038.t1 AT5G49330 60.345 116 46 0 1 116 1 116 5.15e-49 167
MS.gene031038.t1 AT3G49690 60.465 129 50 1 1 128 1 129 6.95e-49 166
MS.gene031038.t1 AT1G16490 55.725 131 51 1 3 133 5 128 7.34e-49 164
MS.gene031038.t1 AT5G07700 41.429 210 111 2 1 210 1 198 1.41e-48 166
MS.gene031038.t1 AT5G07700 41.429 210 111 2 1 210 1 198 1.41e-48 166
MS.gene031038.t1 AT4G34990 61.207 116 45 0 1 116 1 116 1.52e-48 164
MS.gene031038.t1 AT3G28910 43.089 246 112 6 77 306 1 234 1.76e-48 162
MS.gene031038.t1 AT5G57620 63.248 117 42 1 1 116 1 117 2.01e-48 165
MS.gene031038.t1 AT5G16600 60.504 119 47 0 1 119 1 119 2.51e-48 165
MS.gene031038.t1 AT4G37780 62.393 117 43 1 1 116 1 117 3.99e-48 164
MS.gene031038.t1 AT1G74430 64.407 118 42 0 1 118 1 118 7.67e-48 162
MS.gene031038.t1 AT2G47460 57.983 119 50 0 1 119 1 119 1.38e-47 164
MS.gene031038.t1 AT5G23000 61.538 117 44 1 1 116 1 117 5.29e-47 161
MS.gene031038.t1 AT5G65790 63.248 117 42 1 1 116 1 117 5.59e-47 162
MS.gene031038.t1 AT3G12820 57.364 129 55 0 3 131 5 133 8.23e-47 158
MS.gene031038.t1 AT1G63910 58.475 118 49 0 1 118 1 118 8.85e-47 162
MS.gene031038.t1 AT2G36890 62.393 117 43 1 1 116 1 117 1.04e-46 160
MS.gene031038.t1 AT4G22680 60.504 119 47 0 1 119 1 119 1.12e-46 159
MS.gene031038.t1 AT2G36890 62.393 117 43 1 1 116 42 158 1.53e-46 160
MS.gene031038.t1 AT3G62610 60.345 116 46 0 1 116 1 116 1.97e-46 160
MS.gene031038.t1 AT5G14340 59.664 119 48 0 1 119 13 131 3.19e-46 157
MS.gene031038.t1 AT5G40330 58.475 118 49 0 13 130 13 130 1.53e-45 154
MS.gene031038.t1 AT4G01680 59.829 117 47 0 1 117 1 117 1.86e-45 155
MS.gene031038.t1 AT1G57560 58.475 118 49 0 1 118 1 118 2.45e-45 156
MS.gene031038.t1 AT1G57560 58.475 118 49 0 1 118 1 118 2.93e-45 155
MS.gene031038.t1 AT3G13890 59.459 111 45 0 6 116 6 116 3.73e-45 157
MS.gene031038.t1 AT5G26660 59.322 118 48 0 1 118 1 118 3.94e-45 157
MS.gene031038.t1 AT1G18710 59.322 118 48 0 1 118 1 118 4.59e-45 154
MS.gene031038.t1 AT5G14750 63.462 104 38 0 13 116 17 120 1.10e-44 151
MS.gene031038.t1 AT4G01680 49.032 155 76 1 1 152 1 155 1.16e-44 155
MS.gene031038.t1 AT1G79180 49.660 147 41 1 3 116 5 151 1.88e-44 154
MS.gene031038.t1 AT5G62320 56.452 124 47 1 3 119 4 127 2.04e-44 152
MS.gene031038.t1 AT3G28470 59.091 110 45 0 1 110 1 110 3.00e-44 154
MS.gene031038.t1 AT2G32460 62.617 107 40 0 11 117 17 123 6.89e-44 157
MS.gene031038.t1 AT1G09540 57.627 118 50 0 1 118 1 118 7.31e-44 154
MS.gene031038.t1 AT2G32460 62.617 107 40 0 11 117 5 111 7.49e-44 156
MS.gene031038.t1 AT5G55020 63.551 107 39 0 12 118 26 132 2.15e-43 156
MS.gene031038.t1 AT5G35550 58.407 113 47 0 9 121 11 123 6.41e-43 149
MS.gene031038.t1 AT3G12720 56.757 111 48 0 6 116 16 126 8.62e-43 150
MS.gene031038.t1 AT5G06100 56.364 110 48 0 8 117 28 137 1.27e-42 152
MS.gene031038.t1 AT3G01530 52.756 127 54 2 8 133 20 141 2.19e-42 145
MS.gene031038.t1 AT5G52600 52.632 133 59 2 6 135 3 134 4.13e-42 145
MS.gene031038.t1 AT3G13890 55.000 120 45 1 6 116 6 125 4.19e-42 149
MS.gene031038.t1 AT3G27920 61.538 104 40 0 13 116 15 118 4.63e-42 145
MS.gene031038.t1 AT5G06100 56.364 110 48 0 8 117 28 137 4.80e-42 152
MS.gene031038.t1 AT5G06100 56.364 110 48 0 8 117 28 137 4.80e-42 152
MS.gene031038.t1 AT5G06100 56.364 110 48 0 8 117 28 137 4.80e-42 152
MS.gene031038.t1 AT5G06100 56.364 110 48 0 8 117 28 137 4.80e-42 152
MS.gene031038.t1 AT2G26960 59.459 111 44 1 9 119 17 126 2.14e-41 149
MS.gene031038.t1 AT4G01680 45.509 167 76 2 1 152 1 167 2.90e-41 147
MS.gene031038.t1 AT3G27810 51.667 120 58 0 12 131 20 139 6.29e-41 142
MS.gene031038.t1 AT5G12870 59.259 108 44 0 12 119 18 125 8.74e-41 144
MS.gene031038.t1 AT3G11440 55.660 106 47 0 12 117 41 146 9.57e-41 148
MS.gene031038.t1 AT3G08500 57.273 110 47 0 8 117 26 135 1.72e-40 144
MS.gene031038.t1 AT3G11440 55.660 106 47 0 12 117 41 146 5.39e-40 147
MS.gene031038.t1 AT3G11440 55.660 106 47 0 12 117 41 146 5.39e-40 147
MS.gene031038.t1 AT3G11440 55.660 106 47 0 12 117 41 146 5.39e-40 147
MS.gene031038.t1 AT3G30210 58.879 107 44 0 11 117 26 132 6.51e-40 141
MS.gene031038.t1 AT2G47190 54.386 114 52 0 12 125 20 133 6.86e-40 141
MS.gene031038.t1 AT4G26930 57.658 111 43 1 8 114 11 121 1.69e-39 143
MS.gene031038.t1 AT1G66370 40.314 191 96 3 10 193 6 185 5.28e-39 138
MS.gene031038.t1 AT3G24310 58.716 109 45 0 9 117 15 123 5.85e-39 139
MS.gene031038.t1 AT1G25340 46.099 141 67 1 13 153 19 150 8.54e-39 139
MS.gene031038.t1 AT5G40350 54.867 113 50 1 12 123 17 129 1.21e-38 136
MS.gene031038.t1 AT3G48920 40.933 193 95 4 9 183 15 206 7.11e-38 135
MS.gene031038.t1 AT1G68320 51.282 117 57 0 10 126 17 133 1.05e-37 136
MS.gene031038.t1 AT1G48000 52.174 115 55 0 12 126 32 146 1.83e-37 134
MS.gene031038.t1 AT3G46130 54.206 107 49 0 9 115 6 112 2.32e-37 134
MS.gene031038.t1 AT4G13480 58.095 105 44 0 13 117 7 111 2.50e-37 134
MS.gene031038.t1 AT5G59780 37.931 203 122 2 9 208 5 206 4.44e-37 132
MS.gene031038.t1 AT1G74650 38.023 263 95 8 77 302 1 232 1.03e-35 130
MS.gene031038.t1 AT5G52260 57.009 107 46 0 9 115 9 115 1.38e-35 130
MS.gene031038.t1 AT1G25340 44.681 141 64 2 13 153 19 145 1.87e-35 130
MS.gene031038.t1 AT1G25340 44.681 141 64 2 13 153 19 145 2.77e-35 130
MS.gene031038.t1 AT4G25560 51.786 112 54 0 10 121 8 119 2.98e-34 127
MS.gene031038.t1 AT1G66380 56.604 106 46 0 10 115 6 111 3.29e-34 122
MS.gene031038.t1 AT5G49620 51.304 115 56 0 12 126 26 140 1.23e-33 125
MS.gene031038.t1 AT3G06490 50.420 119 59 0 8 126 15 133 1.25e-33 126
MS.gene031038.t1 AT3G60460 48.214 112 57 1 9 119 8 119 6.49e-33 124
MS.gene031038.t1 AT1G66390 55.660 106 47 0 10 115 6 111 9.91e-33 122
MS.gene031038.t1 AT1G56650 55.660 106 47 0 10 115 6 111 1.47e-32 121
MS.gene031038.t1 AT3G53200 50.467 107 53 0 9 115 6 112 1.90e-31 118
MS.gene031038.t1 AT5G14750 70.000 70 21 0 47 116 17 86 1.43e-30 114
MS.gene031038.t1 AT5G49620 45.736 129 56 1 12 126 26 154 4.25e-30 116
MS.gene031038.t1 AT5G35550 66.234 77 26 0 45 121 50 126 4.67e-30 115
MS.gene031038.t1 AT2G26950 49.505 101 51 0 9 109 13 113 6.02e-30 117
MS.gene031038.t1 AT3G12820 61.176 85 33 0 47 131 1 85 1.68e-29 111
MS.gene031038.t1 AT4G37260 36.269 193 112 4 14 200 13 200 1.00e-28 113
MS.gene031038.t1 AT5G26660 66.216 74 25 0 45 118 14 87 1.11e-28 112
MS.gene031038.t1 AT2G23290 50.943 106 43 2 14 115 13 113 3.02e-28 111
MS.gene031038.t1 AT2G39880 50.000 106 44 2 14 115 50 150 3.16e-28 112
MS.gene031038.t1 AT3G55730 47.273 110 49 2 14 119 56 160 2.77e-27 110
MS.gene031038.t1 AT1G74650 35.317 252 95 8 88 302 7 227 6.13e-27 106
MS.gene031038.t1 AT3G27810 51.724 87 42 0 45 131 4 90 4.12e-26 102
MS.gene031038.t1 AT5G59780 37.725 167 100 2 45 208 20 185 6.56e-26 102
MS.gene031038.t1 AT3G46130 58.667 75 31 0 44 118 9 83 8.05e-26 103
MS.gene031038.t1 AT3G09230 44.144 111 53 2 14 120 55 160 1.04e-25 106
MS.gene031038.t1 AT3G46130 61.972 71 27 0 45 115 20 90 1.97e-25 102
MS.gene031038.t1 AT5G02320 46.154 104 55 1 14 117 127 229 4.66e-25 105
MS.gene031038.t1 AT5G02320 46.154 104 55 1 14 117 127 229 4.66e-25 105
MS.gene031038.t1 AT5G02320 46.154 104 55 1 14 117 67 169 5.85e-25 105
MS.gene031038.t1 AT5G40350 56.098 82 35 1 43 123 3 84 1.79e-24 97.8
MS.gene031038.t1 AT1G17950 40.336 119 68 2 14 132 5 120 5.27e-24 98.6
MS.gene031038.t1 AT3G53200 55.844 77 34 0 39 115 3 79 7.49e-24 97.1
MS.gene031038.t1 AT3G50060 45.098 102 55 1 14 115 6 106 1.19e-23 99.0
MS.gene031038.t1 AT5G11510 43.810 105 54 2 14 116 81 182 1.34e-23 102
MS.gene031038.t1 AT5G11510 43.810 105 54 2 14 116 81 182 1.34e-23 102
MS.gene031038.t1 AT5G11510 43.810 105 54 2 14 116 81 182 1.34e-23 102
MS.gene031038.t1 AT4G32730 39.130 115 69 1 14 128 87 200 1.53e-23 101
MS.gene031038.t1 AT5G11510 43.810 105 54 2 14 116 81 182 1.61e-23 101
MS.gene031038.t1 AT5G11510 43.810 105 54 2 14 116 81 182 1.68e-23 101
MS.gene031038.t1 AT4G32730 39.130 115 69 1 14 128 87 200 1.76e-23 101
MS.gene031038.t1 AT4G32730 39.130 115 69 1 14 128 87 200 1.76e-23 101
MS.gene031038.t1 AT4G32730 39.130 115 69 1 14 128 87 200 1.76e-23 101
MS.gene031038.t1 AT4G32730 39.130 115 69 1 14 128 87 200 1.76e-23 101
MS.gene031038.t1 AT5G67300 45.283 106 49 2 14 115 6 106 2.13e-23 98.2
MS.gene031038.t1 AT1G69560 40.351 114 67 1 9 122 102 214 2.59e-23 98.6
MS.gene031038.t1 AT3G27785 40.458 131 65 3 9 137 184 303 2.68e-23 99.8
MS.gene031038.t1 AT1G69560 40.351 114 67 1 9 122 118 230 3.39e-23 98.6
MS.gene031038.t1 AT1G66380 62.500 72 27 0 44 115 7 78 1.18e-22 90.9
MS.gene031038.t1 AT5G40360 37.931 116 70 2 9 124 153 266 1.70e-22 96.7
MS.gene031038.t1 AT3G09370 45.098 102 55 1 14 115 135 235 2.65e-22 97.4
MS.gene031038.t1 AT3G09370 45.098 102 55 1 14 115 130 230 2.65e-22 97.4
MS.gene031038.t1 AT1G22640 65.517 58 20 0 59 116 2 59 3.01e-22 92.8
MS.gene031038.t1 AT3G09370 45.098 102 55 1 14 115 143 243 3.45e-22 97.1
MS.gene031038.t1 AT1G26780 40.952 105 61 1 14 118 98 201 4.08e-22 94.4
MS.gene031038.t1 AT1G18960 42.017 119 62 4 1 119 1 112 5.61e-22 94.4
MS.gene031038.t1 AT5G14750 67.241 58 19 0 59 116 2 59 6.66e-22 90.1
MS.gene031038.t1 AT5G14750 67.241 58 19 0 59 116 2 59 6.66e-22 90.1
MS.gene031038.t1 AT1G26780 40.952 105 61 1 14 118 98 201 8.84e-22 94.7
MS.gene031038.t1 AT4G33450 36.134 119 75 1 9 127 14 131 9.36e-22 92.8
MS.gene031038.t1 AT3G23250 67.797 59 19 0 59 117 2 60 9.60e-22 92.0
MS.gene031038.t1 AT2G37630 41.584 101 57 1 17 115 7 107 1.10e-21 94.4
MS.gene031038.t1 AT1G71030 46.429 84 45 0 51 134 5 88 1.63e-21 90.1
MS.gene031038.t1 AT1G71030 46.429 84 45 0 51 134 19 102 1.95e-21 90.5
MS.gene031038.t1 AT4G18770 38.182 110 67 1 9 118 212 320 2.38e-21 94.4
MS.gene031038.t1 AT5G58850 40.000 105 62 1 14 118 105 208 2.73e-21 94.0
MS.gene031038.t1 AT1G66380 46.465 99 52 1 10 107 6 104 4.52e-21 87.0
MS.gene031038.t1 AT5G11050 35.938 128 79 2 12 137 103 229 6.03e-21 92.8
MS.gene031038.t1 AT5G17800 39.048 105 63 1 14 118 93 196 1.66e-20 90.5
MS.gene031038.t1 AT3G29020 34.351 131 78 2 14 137 65 194 2.63e-20 88.2
MS.gene031038.t1 AT1G73410 40.000 105 62 1 14 118 6 109 4.17e-20 87.8
MS.gene031038.t1 AT5G39700 37.719 114 70 1 9 122 51 163 4.50e-20 86.7
MS.gene031038.t1 AT3G29020 34.351 131 78 2 14 137 67 196 5.45e-20 89.0
MS.gene031038.t1 AT1G73410 40.000 105 62 1 14 118 6 109 8.45e-20 86.3
MS.gene031038.t1 AT1G08810 39.552 134 27 4 88 221 5 84 3.70e-17 79.0
MS.gene031038.t1 AT1G08810 39.552 134 27 4 88 221 5 84 3.70e-17 79.0
MS.gene031038.t1 AT1G14350 38.614 101 61 1 17 117 28 127 4.36e-17 82.0
MS.gene031038.t1 AT1G14350 38.614 101 61 1 17 117 28 127 4.36e-17 82.0
MS.gene031038.t1 AT2G02820 38.614 101 61 1 17 117 33 132 4.53e-17 80.9
MS.gene031038.t1 AT2G25230 41.748 103 57 3 9 110 21 121 5.39e-17 79.3
MS.gene031038.t1 AT4G00540 35.714 126 69 3 12 130 101 221 7.02e-17 80.9
MS.gene031038.t1 AT2G02820 38.614 101 61 1 17 117 33 132 8.15e-17 81.3
MS.gene031038.t1 AT4G00540 35.714 126 69 3 12 130 99 219 9.89e-17 80.9
MS.gene031038.t1 AT2G02820 38.614 101 61 1 17 117 33 132 1.02e-16 80.9
MS.gene031038.t1 AT5G40430 34.314 102 65 2 9 110 49 148 1.81e-14 72.4
MS.gene031038.t1 AT5G59780 31.690 142 93 2 70 208 1 141 8.47e-12 63.2
MS.gene031038.t1 AT3G46130 53.061 49 23 0 70 118 1 49 1.30e-11 63.2

Find 42 sgRNAs with CRISPR-Local

Find 83 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCCATTGTCCTCTAGCTAT+TGG 0.200188 6.2:-6334755 None:intergenic
AAGAACATGGTCCTGGAAAT+TGG 0.229465 6.2:+6333534 MS.gene031038:CDS
TTACCATTTGATCCTTCTTT+AGG 0.237099 6.2:-6334998 None:intergenic
TCTAGTGAAGGAATGGAAAA+AGG 0.259725 6.2:+6335058 MS.gene031038:CDS
TAAGACAAAGATTGAGTTGT+AGG 0.286539 6.2:-6334920 None:intergenic
TCCTGAAGAAGATATCATTT+TGG 0.290596 6.2:+6333499 MS.gene031038:CDS
GATGCACTAGTCTCATAATT+TGG 0.316531 6.2:-6335037 None:intergenic
ACTTCTTCTGAATCATGTTT+AGG 0.323676 6.2:+6334707 MS.gene031038:CDS
AGAGTAGTAGAATCAGAATT+TGG 0.353581 6.2:-6335145 None:intergenic
ACCAAAATGATATCTTCTTC+AGG 0.368108 6.2:-6333500 None:intergenic
GGAACAGCTTTCCAATTTCC+AGG 0.374375 6.2:-6333545 None:intergenic
TTAGATGGACAAATTATCTA+AGG 0.402300 6.2:+6334077 MS.gene031038:CDS
GAGAGCAAACCTGAAAATAT+TGG 0.410276 6.2:+6335178 MS.gene031038:CDS
ATGTCATTGTCTGTTCTTTG+TGG 0.410985 6.2:-6334629 None:intergenic
AAAGCTGTTCCTACCAATAC+TGG 0.417394 6.2:+6333557 MS.gene031038:CDS
ATCTAAGGCCAGGAATCAAA+AGG 0.434110 6.2:+6334092 MS.gene031038:CDS
GTAAGAGTTGCAGACTTAGA+TGG 0.439224 6.2:+6334062 MS.gene031038:CDS
ACCAATAGCTAGAGGACAAT+GGG 0.439491 6.2:+6334754 MS.gene031038:CDS
TATATTCAAGAACATGGTCC+TGG 0.447349 6.2:+6333527 MS.gene031038:CDS
AAACCTAAAGAAGGATCAAA+TGG 0.460507 6.2:+6334995 MS.gene031038:CDS
TTCCTAAAAGAGCTTGAAGA+TGG 0.460852 6.2:-6334150 None:intergenic
TTGTGGAAGGTATGCAGCTA+TGG 0.471651 6.2:-6334612 None:intergenic
TAGCTCGTTTGTTGAAAGGT+TGG 0.493832 6.2:+6334963 MS.gene031038:CDS
AACATAGCTCGTTTGTTGAA+AGG 0.496526 6.2:+6334959 MS.gene031038:CDS
CATTGTCTGTTCTTTGTGGA+AGG 0.502539 6.2:-6334625 None:intergenic
CTAGAGGACAATGGGAAAGA+AGG 0.504422 6.2:+6334762 MS.gene031038:CDS
GATTAAGTAATTACCAGTAT+TGG 0.505516 6.2:-6333570 None:intergenic
TGGACAAATTATCTAAGGCC+AGG 0.512885 6.2:+6334082 MS.gene031038:CDS
TCTAAGGCCAGGAATCAAAA+GGG 0.514309 6.2:+6334093 MS.gene031038:CDS
TAGTGCATCTAGTGAAGGAA+TGG 0.517303 6.2:+6335051 MS.gene031038:CDS
GTTTCTTATATTCAAGAACA+TGG 0.547197 6.2:+6333521 MS.gene031038:CDS
ATATCTTCTTCAGGAGTCCA+AGG 0.586539 6.2:-6333491 None:intergenic
AACCAATAGCTAGAGGACAA+TGG 0.597136 6.2:+6334753 MS.gene031038:CDS
CCACCATGTTGTGATAAAGA+AGG 0.602199 6.2:+6333455 MS.gene031038:CDS
GAGACTAGTGCATCTAGTGA+AGG 0.607292 6.2:+6335046 MS.gene031038:CDS
GTTTCTCAACCAATAGCTAG+AGG 0.617339 6.2:+6334746 MS.gene031038:CDS
AAGTAATTACCAGTATTGGT+AGG 0.620581 6.2:-6333566 None:intergenic
ACACCTTCTTTATCACAACA+TGG 0.621958 6.2:-6333458 None:intergenic
GGTGCTTGTCAAGAGAAAGT+TGG 0.654275 6.2:+6335247 MS.gene031038:CDS
CTAAGGCCAGGAATCAAAAG+GGG 0.665589 6.2:+6334094 MS.gene031038:CDS
GCTTCAAACTGATATTCACA+TGG 0.698810 6.2:+6334784 MS.gene031038:CDS
CCTTCTTTATCACAACATGG+TGG 0.736854 6.2:-6333455 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCAAAATTTCTTTGATAA+TGG - chr6.2:6333763-6333782 None:intergenic 15.0%
!! CTTCAAAAATTAAAAAAACT+AGG - chr6.2:6334225-6334244 None:intergenic 15.0%
!!! AAAGAAATTTTGATTGTTTT+AGG + chr6.2:6333768-6333787 MS.gene031038:intron 15.0%
!!! TTAATAGTTTTTTTTTTGTC+AGG + chr6.2:6334025-6334044 MS.gene031038:intron 15.0%
!! ACAATGACATAAAAAACTAT+TGG + chr6.2:6334642-6334661 MS.gene031038:CDS 20.0%
!! ATCAAAATTTCCTATGATTA+TGG - chr6.2:6333862-6333881 None:intergenic 20.0%
!! ATGAAAAATAAACCTAAAGA+AGG + chr6.2:6334986-6335005 MS.gene031038:CDS 20.0%
!! CAAAAATTAAAAAAACTAGG+TGG - chr6.2:6334222-6334241 None:intergenic 20.0%
!! GATAAAATCATTTAATAGAG+TGG - chr6.2:6333608-6333627 None:intergenic 20.0%
!!! AGGAAATTTTGATTCTTTTA+AGG + chr6.2:6333869-6333888 MS.gene031038:intron 20.0%
!!! AGGAGATTTTAATTCTTTTA+AGG + chr6.2:6333989-6334008 MS.gene031038:intron 20.0%
!!! ATAATTTCACCAATATTTTC+AGG - chr6.2:6335190-6335209 None:intergenic 20.0%
!!! GATTAGAAATAGTCTTTTTT+TGG + chr6.2:6333795-6333814 MS.gene031038:intron 20.0%
!!! TGAAATTAATAGTCTGTTTT+TGG + chr6.2:6333694-6333713 MS.gene031038:intron 20.0%
! CTAGAAAAATTTGATTCAAG+TGG - chr6.2:6334875-6334894 None:intergenic 25.0%
! GAAGAAAAAGCTGAAAAAAT+TGG + chr6.2:6334676-6334695 MS.gene031038:CDS 25.0%
! GATTAAGTAATTACCAGTAT+TGG - chr6.2:6333573-6333592 None:intergenic 25.0%
! GTTTCTTATATTCAAGAACA+TGG + chr6.2:6333521-6333540 MS.gene031038:CDS 25.0%
! TCATATTGTTAACGCAATTT+AGG - chr6.2:6334340-6334359 None:intergenic 25.0%
! TTAGATGGACAAATTATCTA+AGG + chr6.2:6334077-6334096 MS.gene031038:CDS 25.0%
! TTTATAGAGACCATAATCAT+AGG + chr6.2:6333849-6333868 MS.gene031038:intron 25.0%
!! ACATTGATTATTGTACAGAT+GGG + chr6.2:6334586-6334605 MS.gene031038:intron 25.0%
!! TTTTATAAGACTATGCTCAA+AGG + chr6.2:6333969-6333988 MS.gene031038:intron 25.0%
!!! TTATTTTGAGAACTTTGTCT+AGG + chr6.2:6334514-6334533 MS.gene031038:intron 25.0%
!!! TTTTTTTGTCAGGTTTGTTA+AGG + chr6.2:6334035-6334054 MS.gene031038:intron 25.0%
AAACCTAAAGAAGGATCAAA+TGG + chr6.2:6334995-6335014 MS.gene031038:CDS 30.0%
AAATTACTTTGACATGTGCT+AGG - chr6.2:6334432-6334451 None:intergenic 30.0%
ACCAAAATGATATCTTCTTC+AGG - chr6.2:6333503-6333522 None:intergenic 30.0%
ACTTCTTCTGAATCATGTTT+AGG + chr6.2:6334707-6334726 MS.gene031038:CDS 30.0%
AGAGTAGTAGAATCAGAATT+TGG - chr6.2:6335148-6335167 None:intergenic 30.0%
CTTTCTCTATGCTTGAAAAA+TGG + chr6.2:6335212-6335231 MS.gene031038:CDS 30.0%
TTAAAAAAACTAGGTGGTTG+TGG - chr6.2:6334216-6334235 None:intergenic 30.0%
TTACCATTTGATCCTTCTTT+AGG - chr6.2:6335001-6335020 None:intergenic 30.0%
! CACATTGATTATTGTACAGA+TGG + chr6.2:6334585-6334604 MS.gene031038:intron 30.0%
! GAGACTTTTGAATCTTTGTT+TGG + chr6.2:6335103-6335122 MS.gene031038:CDS 30.0%
! GATAAAGAAGGTGTGAAAAA+AGG + chr6.2:6333467-6333486 MS.gene031038:CDS 30.0%
! GGATAATCATTTTCTCTTCT+TGG - chr6.2:6334132-6334151 None:intergenic 30.0%
! TAAGACAAAGATTGAGTTGT+AGG - chr6.2:6334923-6334942 None:intergenic 30.0%
! TCCTGAAGAAGATATCATTT+TGG + chr6.2:6333499-6333518 MS.gene031038:CDS 30.0%
!! AAGTAATTACCAGTATTGGT+AGG - chr6.2:6333569-6333588 None:intergenic 30.0%
!!! CATTTTTCAAGCATAGAGAA+AGG - chr6.2:6335214-6335233 None:intergenic 30.0%
ACACCTTCTTTATCACAACA+TGG - chr6.2:6333461-6333480 None:intergenic 35.0%
ATGTCATTGTCTGTTCTTTG+TGG - chr6.2:6334632-6334651 None:intergenic 35.0%
CTAGTGAAGGAATGGAAAAA+GGG + chr6.2:6335059-6335078 MS.gene031038:CDS 35.0%
GAAAAATGGCTTCTAGATGA+TGG + chr6.2:6335226-6335245 MS.gene031038:CDS 35.0%
GAGAGCAAACCTGAAAATAT+TGG + chr6.2:6335178-6335197 MS.gene031038:CDS 35.0%
GCTTCAAACTGATATTCACA+TGG + chr6.2:6334784-6334803 MS.gene031038:CDS 35.0%
TATATTCAAGAACATGGTCC+TGG + chr6.2:6333527-6333546 MS.gene031038:CDS 35.0%
TCGAGAATCACGATCAAATA+CGG + chr6.2:6334305-6334324 MS.gene031038:intron 35.0%
TCTAGTGAAGGAATGGAAAA+AGG + chr6.2:6335058-6335077 MS.gene031038:CDS 35.0%
TTCCTAAAAGAGCTTGAAGA+TGG - chr6.2:6334153-6334172 None:intergenic 35.0%
! AACATAGCTCGTTTGTTGAA+AGG + chr6.2:6334959-6334978 MS.gene031038:CDS 35.0%
! ATCCATCTTCAAGCTCTTTT+AGG + chr6.2:6334148-6334167 MS.gene031038:CDS 35.0%
! GATGCACTAGTCTCATAATT+TGG - chr6.2:6335040-6335059 None:intergenic 35.0%
!! CAGAAAAAAGCACTTCTAGT+AGG + chr6.2:6334837-6334856 MS.gene031038:CDS 35.0%
!! TTCAAGCTCTTTTAGGAAAC+AGG + chr6.2:6334155-6334174 MS.gene031038:CDS 35.0%
!!! CTACTAGAAGTGCTTTTTTC+TGG - chr6.2:6334839-6334858 None:intergenic 35.0%
!!! TGCTTCACTAAGTGCTTTTT+TGG - chr6.2:6334810-6334829 None:intergenic 35.0%
AAAGCTGTTCCTACCAATAC+TGG + chr6.2:6333557-6333576 MS.gene031038:CDS 40.0%
AACCAATAGCTAGAGGACAA+TGG + chr6.2:6334753-6334772 MS.gene031038:CDS 40.0%
AAGAACATGGTCCTGGAAAT+TGG + chr6.2:6333534-6333553 MS.gene031038:CDS 40.0%
AAGGTGTGAAAAAAGGACCT+TGG + chr6.2:6333474-6333493 MS.gene031038:CDS 40.0%
ACCAATAGCTAGAGGACAAT+GGG + chr6.2:6334754-6334773 MS.gene031038:CDS 40.0%
ATATCTTCTTCAGGAGTCCA+AGG - chr6.2:6333494-6333513 None:intergenic 40.0%
CATTGTCTGTTCTTTGTGGA+AGG - chr6.2:6334628-6334647 None:intergenic 40.0%
CCACCATGTTGTGATAAAGA+AGG + chr6.2:6333455-6333474 MS.gene031038:CDS 40.0%
CCTTCTTTATCACAACATGG+TGG - chr6.2:6333458-6333477 None:intergenic 40.0%
GTAAGAGTTGCAGACTTAGA+TGG + chr6.2:6334062-6334081 MS.gene031038:CDS 40.0%
GTTTCTCAACCAATAGCTAG+AGG + chr6.2:6334746-6334765 MS.gene031038:CDS 40.0%
TAGTGCATCTAGTGAAGGAA+TGG + chr6.2:6335051-6335070 MS.gene031038:CDS 40.0%
! ATCTAAGGCCAGGAATCAAA+AGG + chr6.2:6334092-6334111 MS.gene031038:CDS 40.0%
! TAGCTCGTTTGTTGAAAGGT+TGG + chr6.2:6334963-6334982 MS.gene031038:CDS 40.0%
! TCTAAGGCCAGGAATCAAAA+GGG + chr6.2:6334093-6334112 MS.gene031038:CDS 40.0%
! TGGACAAATTATCTAAGGCC+AGG + chr6.2:6334082-6334101 MS.gene031038:CDS 40.0%
!! AAGTTACCCCTTTTGATTCC+TGG - chr6.2:6334103-6334122 None:intergenic 40.0%
CTAAGGCCAGGAATCAAAAG+GGG + chr6.2:6334094-6334113 MS.gene031038:CDS 45.0%
CTAGAGGACAATGGGAAAGA+AGG + chr6.2:6334762-6334781 MS.gene031038:CDS 45.0%
GAGACTAGTGCATCTAGTGA+AGG + chr6.2:6335046-6335065 MS.gene031038:CDS 45.0%
GGAACAGCTTTCCAATTTCC+AGG - chr6.2:6333548-6333567 None:intergenic 45.0%
GGTGCTTGTCAAGAGAAAGT+TGG + chr6.2:6335247-6335266 MS.gene031038:CDS 45.0%
GGTGGTTGTGGTAGATAAAG+AGG - chr6.2:6334204-6334223 None:intergenic 45.0%
TCCCATTGTCCTCTAGCTAT+TGG - chr6.2:6334758-6334777 None:intergenic 45.0%
! TTGTGGAAGGTATGCAGCTA+TGG - chr6.2:6334615-6334634 None:intergenic 45.0%


Chromosome Type Strat End Strand Name
chr6.2 gene 6333446 6335297 6333446 ID=MS.gene031038
chr6.2 mRNA 6333446 6335297 6333446 ID=MS.gene031038.t1;Parent=MS.gene031038
chr6.2 exon 6333446 6333578 6333446 ID=MS.gene031038.t1.exon1;Parent=MS.gene031038.t1
chr6.2 CDS 6333446 6333578 6333446 ID=cds.MS.gene031038.t1;Parent=MS.gene031038.t1
chr6.2 exon 6334047 6334176 6334047 ID=MS.gene031038.t1.exon2;Parent=MS.gene031038.t1
chr6.2 CDS 6334047 6334176 6334047 ID=cds.MS.gene031038.t1;Parent=MS.gene031038.t1
chr6.2 exon 6334604 6335297 6334604 ID=MS.gene031038.t1.exon3;Parent=MS.gene031038.t1
chr6.2 CDS 6334604 6335297 6334604 ID=cds.MS.gene031038.t1;Parent=MS.gene031038.t1
Gene Sequence

>MS.gene031038

ATGGTTAGACCACCATGTTGTGATAAAGAAGGTGTGAAAAAAGGACCTTGGACTCCTGAAGAAGATATCATTTTGGTTTCTTATATTCAAGAACATGGTCCTGGAAATTGGAAAGCTGTTCCTACCAATACTGGTAATTACTTAATCACTCTTCTAGTTCCACTCTATTAAATGATTTTATCAAAGTTTTTTTCTTGTTTTATAAGATTATTAATCAAAGAAATTTTGAATTATTTAATGATGTGATTTGAAATTAATAGTCTGTTTTTGGTTACTTATCAATGTTGTTTTTAATTTTTGTCTTTTTTATTAAACCATTATCAAAGAAATTTTGATTGTTTTAGGTTTTGATTAGAAATAGTCTTTTTTTGGTGATTTTGTAAATGTTTTTTTTTTGTCTTGTTTTATAGAGACCATAATCATAGGAAATTTTGATTCTTTTAAGGTCGTGACTTGATATTGTTTTTTTTTTTTGTTGAAATTTATCAATTTTTAATTTTTAAAATTTTATGTTTATGTCTTGTTTTATAAGACTATGCTCAAAGGAGATTTTAATTCTTTTAAGGTTGTGATTTGAAGTTAATAGTTTTTTTTTTGTCAGGTTTGTTAAGGTGTAGTAAGAGTTGCAGACTTAGATGGACAAATTATCTAAGGCCAGGAATCAAAAGGGGTAACTTCACTGACCAAGAAGAGAAAATGATTATCCATCTTCAAGCTCTTTTAGGAAACAGGTATATTCATTGATTATTCTTCAACCTCTTTATCTACCACAACCACCTAGTTTTTTTAATTTTTGAAGAATATACAAAAGTTTTTAAATCACTATTCTAGATGTGCTTGCATCACAATCTCTAACTTCTCGAGAATCACGATCAAATACGGCTGATGTAACCTAAATTGCGTTAACAATATGATTTAAAGAGATATTTAAAACGTTGATGTCACGACTTAGATCGTAGTTGTAAACTTTTATTTTTATAAGACCTAGCACATGTCAAAGTAATTTTTTTCTTAACAATAATACATAATAAAGTGAAATTTAATTACTTTTATTTTTCATCAAAGTTGTTATTTTGAGAACTTTGTCTAGGAAAAGTGCTTTTCTGAAGTACTTTTTTTCACATGCTAATTAATTGAATCACATTGATTATTGTACAGATGGGCTGCCATAGCTGCATACCTTCCACAAAGAACAGACAATGACATAAAAAACTATTGGAACACTTATTTGAAGAAAAAGCTGAAAAAATTGGAAACAAGTACTTCTTCTGAATCATGTTTAGGTCATGATGAATTTTCAGTTTCTCAACCAATAGCTAGAGGACAATGGGAAAGAAGGCTTCAAACTGATATTCACATGGCCAAAAAAGCACTTAGTGAAGCACTTCAACCAGAAAAAAGCACTTCTAGTAGGAACTTAATGTTACCACTTGAATCAAATTTTTCTAGTGAAAGCTCTCTTTGTTCAACAAAACCTACAACTCAATCTTTGTCTTATGCTTCAAGTGCTGACAACATAGCTCGTTTGTTGAAAGGTTGGATGAAAAATAAACCTAAAGAAGGATCAAATGGTAATAACACATATGTGACACCAAATTATGAGACTAGTGCATCTAGTGAAGGAATGGAAAAAGGGTCAACAAGTGTTGAATTATCTGAGACTTTTGAATCTTTGTTTGGTTATGAGTCTTTTGATTCACCAAATTCTGATTCTACTACTCTTTTTCAAGATGAGAGCAAACCTGAAAATATTGGTGAAATTATGCCTTTCTCTATGCTTGAAAAATGGCTTCTAGATGATGGTGCTTGTCAAGAGAAAGTTGGTCTTAGTGAAATTAATTACATATTTTGA
Protein sequence

>MS.gene031038.t1

MVRPPCCDKEGVKKGPWTPEEDIILVSYIQEHGPGNWKAVPTNTGLLRCSKSCRLRWTNYLRPGIKRGNFTDQEEKMIIHLQALLGNRWAAIAAYLPQRTDNDIKNYWNTYLKKKLKKLETSTSSESCLGHDEFSVSQPIARGQWERRLQTDIHMAKKALSEALQPEKSTSSRNLMLPLESNFSSESSLCSTKPTTQSLSYASSADNIARLLKGWMKNKPKEGSNGNNTYVTPNYETSASSEGMEKGSTSVELSETFESLFGYESFDSPNSDSTTLFQDESKPENIGEIMPFSMLEKWLLDDGACQEKVGLSEINYIF